mRNA_E_fasciculatus_S2_contig7701.15878.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7701.15878.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKM9_ECTSI) HSP 1 Score: 446 bits (1147), Expect = 2.670e-155 Identity = 234/240 (97.50%), Postives = 238/240 (99.17%), Query Frame = 1
Query: 1 RDGSPPELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGFDGAKSILADEGLKGLYTGYSSNIAYAFPADAIKFLVYGAFKRSAKEAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSDDEGYEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVKGLFGVEPRKL 720
+DGSPPELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGF+GAKSILADEGL+GLYTGYSSNIAYAFPADAIKFLVYGA KRSAK+AKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTA SDDEGYEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVKGLFGVEPRKL
Sbjct: 169 QDGSPPELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGFEGAKSILADEGLRGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTAPSDDEGYEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVKGLFGVEPRKL 408
BLAST of mRNA_E_fasciculatus_S2_contig7701.15878.1 vs.
Match: Uncharacterized (protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XTW0_DIALT) HSP 1 Score: 194 bits (492), Expect = 1.690e-56 Identity = 115/249 (46.18%), Postives = 151/249 (60.64%), Query Frame = 1
Query: 16 PELFRGLYDGVLPPLLAGLPSGALFFSAKDAFST----AISNVSGGQYA-ELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGFDGAKSILADEGLKGLYTGYSSNIAYAFPADAIKFLVYGAFKRSAKEAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSDDEGYEGGVLGA---------LGTIS----REESFSALWAGINPRMARSVLSGAIQFGSYEFVKGLFGVE 708
P LF LY GVLP + G+PSGALFF+AKD A+ + GG Y+ E+TT+ AV AQ PYW +RTP ELLK R+Q GL++G + A ++ EG+ GL+ G SN+AYA P D +KF+ Y + KR AK AKGG LST+EA+ G+ S AQA+ TPLDVVRTRV+ A +G A G ++ RE+ AL+AG+ PR+ R+V SG IQFG+YE + LFG
Sbjct: 141 PGLFADLYAGVLPSAVVGVPSGALFFAAKDGAKAWLRGALGSAYGGSYSKEVTTVLAVLAAQLPYWALRTPFELLKTRAQLGLTAGGEGAWRSAARVVEAEGVAGLFVGAGSNVAYAAPTDVVKFVAYESIKRQAKRAKGGGSLSTLEASACGALGSAIAQALCTPLDVVRTRVIAAQPTGGVADGAATDAAIELADARNFGKVAARLVREDGAGALFAGLLPRVGRAVASGGIQFGAYEATRRLFGAS 389
BLAST of mRNA_E_fasciculatus_S2_contig7701.15878.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRM5_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.800e-56 Identity = 113/238 (47.48%), Postives = 143/238 (60.08%), Query Frame = 1
Query: 7 GSPPELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGFDGAKS-ILADEGLKGLYTGYSSNIAYAFPADAIKFLVYGAFKRSAKEAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSDDEGYEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVKGLFGVEPRK 717
G LF LYDG+LPPL+AG P ALFF+ KD +A + G + + T+ AV LA PYW ++TPAE +K R QA D A+S + E + LY GY SN+AYAFP D IKFL+Y KRSAKEA GG KLS + A LGS ++ AQA+TTPLDV+RTR+M +D EG G + AL EE L+AG R+ R +L GA+QF +YE K LFG + K
Sbjct: 75 GRQGALFADLYDGILPPLVAGTPGSALFFAVKDLVQSAAREGAWGLDSRVVTMIAVFLANIPYWSLQTPAEAIKTRLQARDKDVEPVTPDPAESDVSLRERAEDLYAGYGSNLAYAFPVDVIKFLIYEELKRSAKEANGGQKLSPLRTAFLGSISAATAQALTTPLDVLRTRIMLKGADAEGGAGEEVAALRAAIEEEGVGVLFAGTPQRVLRGMLGGAVQFSTYEVSKQLFGEDFAK 312
BLAST of mRNA_E_fasciculatus_S2_contig7701.15878.1 vs.
Match: S-adenosylmethionine (mitochondrial carrier n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEJ8_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.630e-55 Identity = 118/244 (48.36%), Postives = 149/244 (61.07%), Query Frame = 1
Query: 10 SPPELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGFDGAKSILADEGLKGLYTGYSSNIAYAFPADAIKFLVYGAFKRSAKEAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMT---ASSDDE-----GYEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVKGLFGVEPRK 717
+P ELF+ LYDGV P LL G P+GA FF+ KD N G ++ E TTIAAV A PYW IR PAE+LK + Q GL + G A + EGL+GLY GY SNIAYAFP DAIKF+VY A ++S KL+ +E++VLGS AS AQ ++TPLDVVRTR+MT A ++D V I+ EE + L++G+ PR+ R+ LSGAIQFGSYE KG F + K
Sbjct: 208 APAELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEA---VKQEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSR-----KLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGAFSGKGSK 443
BLAST of mRNA_E_fasciculatus_S2_contig7701.15878.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F9G4_9ALVE) HSP 1 Score: 187 bits (475), Expect = 9.760e-53 Identity = 117/263 (44.49%), Postives = 155/263 (58.94%), Query Frame = 1
Query: 16 PELFRGLYDGVLPPLLAGLPSGALFFSAKDAFS-TAIS-----NVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGFDGAKSILADEGLKGLYTGYSSNIAYAFPADAIKFLVYGAFKRSAKEAKGGA----KLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSDDEG-------------------YEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVKGLFGVEPRK 717
P + +GLYDGV+P L+ G P+G+LFF KD S TA+ + G +L+TIA V A PYW +R PAEL+K R Q G+++ S F + ++ D+G+ GLY GY SN AYA P D +KFLVY KR ++AK KLST+E A+ G+ AS AQ V+TPLDV+RTR+MT+ +G YEG +L I E L+AGI+PR+AR+V+SGAIQF +YE VK LFG E K
Sbjct: 260 PSMLKGLYDGVVPALVVGTPAGSLFFGVKDVASKTALEVLKAKGIEGLTGTQLSTIAGVVAASIPYWAVRQPAELVKTRRQTGVATDSVKAF---QEVVEDDGIGGLYQGYGSNFAYAVPTDIVKFLVYDNVKRQWQQAKRQRGEKDKLSTLEGAIGGAAASCVAQIVSTPLDVIRTRLMTSEKKRKGRLTAEEGQGXXXXXXXXREYEG-ILDCGRKIVEREGAGMLFAGISPRIARAVVSGAIQFSTYELVKNLFGEEAAK 518
BLAST of mRNA_E_fasciculatus_S2_contig7701.15878.1 vs.
Match: S-adenosylmethionine (mitochondrial carrier protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K8D7_9EUKA) HSP 1 Score: 170 bits (431), Expect = 3.920e-48 Identity = 98/225 (43.56%), Postives = 145/225 (64.44%), Query Frame = 1
Query: 16 PELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGFDGAKSILADEGLKGLYTGYSSNIAYAFPADAIKFLVYGAFKRSAKEAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSDDEGYEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVK 690
P L++ +Y G+ P +++G P+ ++FF+ KD+ + G T+AAVG A YW +R PAE++K+R Q+G S S A A ++ + G G Y GY+SN+AYAFP D+ KF++Y A K + + +KGGAKLS +EAAV G+ A++AAQ V+TPLDV RTR+MT +D GVL L ++ EE L+AG+ P++AR+++SGA+QF E VK
Sbjct: 98 PALYKDVYSGLAPAVVSGAPAASVFFAIKDSVLQQLKPQLGDTGG---TVAAVGCANLVYWLVRNPAEVIKVRRQSGGESDSAAA---ATALWREIGPGGFYRGYASNVAYAFPVDSSKFVLYSAIKDAWRRSKGGAKLSPLEAAVGGALATMAAQGVSTPLDVARTRIMTLPADQPAP--GVLATLKAVADEEGLRGLYAGLAPKVARALVSGALQFSVLEGVK 314
BLAST of mRNA_E_fasciculatus_S2_contig7701.15878.1 vs.
Match: Uncharacterized (protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FJA6_VITBC) HSP 1 Score: 171 bits (434), Expect = 1.500e-47 Identity = 103/258 (39.92%), Postives = 144/258 (55.81%), Query Frame = 1
Query: 1 RDGSPPELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGFDGAKSILADEGLKGLYTGYSSNIAYAFPADAIKFLVYGAFKRSAKEAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSDDEGYEG--------------------------GVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVKGL 696
R+ + LF LY G++PPL+ G P+ ALFF KD ++ ++ T AAV A PYW +RTP+E++K R QAGL++ + DG + + +G+ GLYTGY++NIAYA+P D IKFLVY + K + G +L+ +E GS AS AQ T PLDV+RTR+MT + G++ I+ EE + LW+G++PR+ R+VLSGAIQFGSYE VKGL
Sbjct: 175 RNQTNDGLFDDLYRGIVPPLVVGTPASALFFGVKDTSMAYLAQAGLSGNLQVRTSAAVLAASVPYWLVRTPSEVVKTRCQAGLANNT---LDGIRKTVEQDGIGGLYTGYNANIAYAYPTDVIKFLVYDSLKAAL-----GGELTLLEKTAAGSLASCTAQLFTNPLDVIRTRLMTQDKRETSVAAASPAXXXXXXXXXXXXXXXXXXAAYSGIVDCGMRIATEEGPARLWSGVSPRLVRAVLSGAIQFGSYELVKGL 424
BLAST of mRNA_E_fasciculatus_S2_contig7701.15878.1 vs.
Match: S-adenosylmethionine (mitochondrial carrier protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E8V3_EMIHU) HSP 1 Score: 164 bits (415), Expect = 1.760e-45 Identity = 96/224 (42.86%), Postives = 137/224 (61.16%), Query Frame = 1
Query: 19 ELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGFDGAKSILADEGLKGLYTGYSSNIAYAFPADAIKFLVYGAFKRSAKEAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSDDEGYEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVK 690
ELF+ YDG+ P L++G P+ + FF+ KD A++ + G+ AE TT+ AV A YWGI+ P+E+LK+R QAG++S + A I EG+ G Y+ N AY+ P D +KFL+Y K S +G + LS +EAAV G+ A+ AQA+ TPLDV R R+MT+ + GV L ++ EE ALWAG+ P++AR++ SGAIQF +YE K
Sbjct: 124 ELFKSPYDGLAPALISGAPAASAFFAVKDGAKRAVAGLQLGK-AE-TTVLAVACANVAYWGIKNPSEVLKVRRQAGVASDTAGA---AVEIWRAEGVAGFYSSAGPNYAYSTPVDVVKFLLYEQLKASYAARRGRSGLSPVEAAVGGAAAAATAQALATPLDVARVRIMTSDAT------GVAATLRRVAAEEGAGALWAGVAPKVARALASGAIQFSTYEATK 336
BLAST of mRNA_E_fasciculatus_S2_contig7701.15878.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUU9_9STRA) HSP 1 Score: 162 bits (411), Expect = 6.580e-45 Identity = 102/233 (43.78%), Postives = 137/233 (58.80%), Query Frame = 1
Query: 19 ELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGFDGAKSILADEGLKGLYTGYSSNIAYAFPADAIKFLVYGAFKRSAKEAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMT-----ASSDDEGYEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVKGLFG 702
+F +DG+L PLL G+P+GALFF KDA TA+ + G +L V +A PYW IR+P EL+K+R Q ++ + G AK I+ EGL GLY G + AYA P D +KF VY K+S+ L + A+LGS AS +AQ VTTPLDVVRTR M +++ G + + I REE ALW+GI+PR+ R+++SG +QFGSYEF K FG
Sbjct: 114 RIFADPFDGILAPLLIGVPAGALFFGVKDA--TAV--LCKGFNEDLVEFTTVAVANGPYWFIRSPTELIKVRQQLDGTTINMTGITLAKDIIQKEGLSGLYVGAIESYAYALPTDLVKFYVYRKLKKSSLPLTSTKNL-VAKKAILGSIASASAQLVTTPLDVVRTRAMEKRTPQSTTTTTGGDLSIPERTLAIIREEGVGALWSGISPRLLRALVSGGLQFGSYEFTKKAFG 341
BLAST of mRNA_E_fasciculatus_S2_contig7701.15878.1 vs.
Match: Hypothetical (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T7P7_PHATR) HSP 1 Score: 159 bits (401), Expect = 3.760e-44 Identity = 99/236 (41.95%), Postives = 134/236 (56.78%), Query Frame = 1
Query: 19 ELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGFDGAKSILADE---------GLKGLYTGYSSNIAYAFPADAIKFLVYGAFKRSAKEAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVM---TASSDDEGYEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVK 690
LF G Y GV PLLA +P+GA+FF KDA + VS + T AV +AQ PYW +R P+E++K R QA + + + + ++ D GL+GLYTGY NI YAFPAD IKF+ Y F R K G E A+ G+ A+ AQ VTTPLDVVR R+M T S ++ L +L T++R+E L+AG +PR+ +++LSGAIQF +YE K
Sbjct: 40 RLFDGSYRGVANPLLANIPAGAIFFGVKDACKENL-RVSTNLPRWVQTTLAVAVAQVPYWAVRNPSEVVKTRQQANIDGYNVGPLEAYQKVIQDSMTKNGNATTGLEGLYTGYWENILYAFPADVIKFVCYDQFSRGRKNLPPG------EGAMAGAAATAIAQFVTTPLDVVRNRIMAVETKFSGNDRVTPSYLDSLTTLARDEGLPGLFAGSSPRVGKAILSGAIQFATYEETK 268 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7701.15878.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7701.15878.1 >prot_E_fasciculatus_S2_contig7701.15878.1 ID=prot_E_fasciculatus_S2_contig7701.15878.1|Name=mRNA_E_fasciculatus_S2_contig7701.15878.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=241bp RDGSPPELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAback to top mRNA from alignment at E_fasciculatus_S2_contig7701:1..2405+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7701.15878.1 ID=mRNA_E_fasciculatus_S2_contig7701.15878.1|Name=mRNA_E_fasciculatus_S2_contig7701.15878.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2405bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7701:1..2405+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7701:1..2405+ >mRNA_E_fasciculatus_S2_contig7701.15878.1 ID=mRNA_E_fasciculatus_S2_contig7701.15878.1|Name=mRNA_E_fasciculatus_S2_contig7701.15878.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=723bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7701:1..2405+ (Ectocarpus fasciculatus EfasUO2)back to top |