mRNA_E_fasciculatus_S2_contig770.15874.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Nephroretinin (4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY6_ECTSI) HSP 1 Score: 552 bits (1423), Expect = 1.420e-173 Identity = 290/320 (90.62%), Postives = 292/320 (91.25%), Query Frame = 1
Query: 1 RSIQLLPGGAPEHHLSKHGKGSLGVGGVSRDSYVVSEDGGAKYIHCVEEAGHQQGGXXXXXXXXXXXXXXAXXXXAMGGCAGGGVDVQEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLICMRG 960
RSIQLLPGGAPEH LSK GKGSLGVG VSR+ Y VSEDGGAKYIHCVEEA HQQG XXXXXXX XXXX DVQEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELP GRACHKRIAYSNPWN+TRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAP GTN RKEAFLFVNDSEGQNEECLLICMRG
Sbjct: 2721 RSIQLLPGGAPEHRLSKRGKGSLGVGRVSREPYGVSEDGGAKYIHCVEEADHQQGADDKGRAGXXXXXXXXXXXXXXXXXXXXXDDVQEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPLGRACHKRIAYSNPWNTTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPGGTNVRKEAFLFVNDSEGQNEECLLICMRG 3040
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU49_9STRA) HSP 1 Score: 283 bits (725), Expect = 2.700e-80 Identity = 161/347 (46.40%), Postives = 204/347 (58.79%), Query Frame = 1
Query: 1 RSIQLLP----GGAPEHHLSKHGKGSLGVGGVSRDSYVVSEDGGAKYIHCVEEAGHQQGGXXXXXXXXXXXXXXAXXXXAMGGCAGGGVD--VQEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLE----------------------VAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLICMR 957
RSI+LLP G P S GV G + +D K++HCV+ G G + G + D V E+ +K RVG FPS FYLL+YDD + LYE WHV+V +RLR+DVH+ LGQ S ADL+VRGDRYSR+VR F+S PA+ F+P + FQLV GAYNRV++R+RP TG KI VH+VDVD+ E+VGAWLATATA+PPV+TK+Y+++LP G+ HKRIAY+NPW R FRL SSD ++ PR+ LE VA GGTGF+RLW AP+ S E FLFVND QNEE + +R
Sbjct: 2961 RSIRLLPSAGWGLLPPSEAS-------GVSGAA-------DDPAEKFVHCVDRTG---GNVVVEWRQRQQQASAPAVVGSKGHTSKLSSDPSVSEIFIKYRVGAFPSAGEFYLLLYDDRDRTRLYEIWHVMVHSRLRLDVHATLGQASAADLVVRGDRYSRRVRCFTSAPADCEFDPPSTFQLVSGAYNRVDMRYRPTRTGGSKIQVHMVDVDTQELVGAWLATATALPPVVTKTYELDLPVGKESHKRIAYANPWLQARAFRLRSSDETVMAPRHGGLEXXXXXXXXXXXXXXXXXXXXXXVAAGGTGFIRLWLHAPDAAGSA-EVFLFVNDENDQNEEYNMDMLR 3289
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDE8_9STRA) HSP 1 Score: 253 bits (646), Expect = 2.050e-78 Identity = 124/215 (57.67%), Postives = 153/215 (71.16%), Query Frame = 1
Query: 313 FYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLICMR 957
FYLL++DD + LYE WHV+V +RLR+DVH+ LGQ S A+L+VRGDRYSR+VR FSS P + F+P FQLV GAYNRV H+VDVD+ E+VGAWLATATA+PPV+TK+ +++LP G+ HKRIAY+NPW+ R FRL SSD ++ PR+ LE A GGTGF+RLW AP+ S E FLFVND QNEECLLI MR
Sbjct: 9 FYLLLHDDRDRTRLYEIWHVMVHSRLRLDVHATLGQASAANLVVRGDRYSRRVRCFSSAPGDCEFDPPTTFQLVSGAYNRV----------------HMVDVDTQELVGAWLATATALPPVVTKTNELDLPVGKESHKRIAYANPWSQARAFRLRSSDETVMAPRHGGLEAAAGGTGFIRLWLHAPDAAGSA-EVFLFVNDENDQNEECLLIRMR 206
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Hypothetical (protein n=2 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QW27_9STRA) HSP 1 Score: 255 bits (652), Expect = 1.210e-70 Identity = 134/316 (42.41%), Postives = 196/316 (62.03%), Query Frame = 1
Query: 1 RSIQLLPGGAPEHHLSKHGKGSLGVGGVSRDSYVVSEDGGAKYIHCVEEAGHQQGGXXXXXXXXXXXXXXAXXXXAMGGCAGGGVDVQEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLI 948
RSIQLL G+P L H S GVG KY+HCVE ++ GG G + QEVL+K R G+FPS FY+LVYDDHYQG ++E WHV+VQ+RLR+DV++ +GQ +P++L+++GD+++R+V +SS PAE F+P+ FQLVPGA+NR ++FR GS+KIH+H+VD+D+ E+V AWL T + PVITK YDV++P G C K+++++N W+ TR ++L SSDP +++PR ++++ G++RL+F P +E LFVND + NEE L+
Sbjct: 2189 RSIQLL--GSPTS-LDHHDYESEGVGSH-------------KYVHCVEMNSNR------------------VVVDWRGGAQAG--ETQEVLIKYRCGKFPSVGEFYILVYDDHYQGVVHECWHVVVQSRLRLDVNAAVGQSTPSELVIQGDKFARRVMVYSSSPAETFFDPSRPFQLVPGAFNRAAVKFRMKQAGSKKIHIHMVDLDTKELVCAWLVTVNSALPVITKVYDVQVPIGVGCSKKLSFTNQWDRTRRYKLMSSDPAVMKPRNPTVDIEPRAIGYMRLYFN-PIDVVGTEEVILFVNDEQDMNEEAFLL 2467
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HFZ8_9STRA) HSP 1 Score: 225 bits (574), Expect = 1.990e-66 Identity = 109/231 (47.19%), Postives = 152/231 (65.80%), Query Frame = 1
Query: 262 QEVLVKC-RVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLST-GSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLI 948
QE+ +K ++G FP R FY+L+YDD Y L E WHV V +RLR D+ + LGQ SP +L+VRGD Y R+V+A+SS P E+ F PA+ F L P YN++ELR+ P T G R++HVHLVD+ + E+V AW+ T A PP ITK Y V++ G HK++++ NPW+ RLFRL S+DP ++RP+ + LE+ F++L+ + P E +L VND E QNEEC I
Sbjct: 63 QELHLKYWKLGAFPFRADFYVLIYDDRYSARLNEIWHVTVASRLRKDIQATLGQASPMELVVRGDGYRRRVKAYSSEPREIKFLPADVFHLAPQQYNKLELRWTPFGTDGMRRVHVHLVDIQTGELVCAWIVTTVATPPAITKDYQVDVAVGEGSHKKVSFDNPWSRHRLFRLRSTDPNVMRPKTDELEIPPRDRAFIKLYIS-PFLRPGFAEVYLLVNDEEDQNEECFRI 292
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Uncharacterized (protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RSH2_SAPDV) HSP 1 Score: 229 bits (583), Expect = 1.690e-61 Identity = 108/229 (47.16%), Postives = 154/229 (67.25%), Query Frame = 1
Query: 262 QEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLI 948
QE+ +K RVG +PS FYLL+YDD Y L+E W + +Q+ +R+D+H+ +GQ +LIV+GD R+V FSS P E+ F+P+ FQL+P A+NR+E+RF + +++I VH+VDVDS ++VGAWL T P++TK +DV LP G K+I+Y NPW+ R F L S+DP I++PR L++ G G G+LRL FA P K+ +LF+ND + QNEECLL
Sbjct: 3386 QEIYIKYRVGDYPSLGVFYLLLYDDMYHARLHEIWRIHIQSMMRLDLHATMGQGVQNELIVKGDAMPRRVSCFSSHPTELQFKPSGIFQLIPHAFNRIEVRFATMQVCAKQIVVHVVDVDSRDLVGAWLLNTTVSEPIVTKVFDVTLPTGVPVLKKISYRNPWDEDRSFVLRSNDPSIMKPREPRLQLQGNGDGYLRLAFA-PHSLPCSKKVYLFINDHQDQNEECLLF 3613
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUC6_9STRA) HSP 1 Score: 227 bits (579), Expect = 4.690e-61 Identity = 135/327 (41.28%), Postives = 191/327 (58.41%), Query Frame = 1
Query: 1 RSIQLLPGGA-PEHHLSKHGKGSL-GVGGVSR-DSYVVSEDGGAKYIHCVEEAGHQQGGXXXXXXXXXXXXXXAXXXXAMGGCAGGGVDVQEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRP--LSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPE-GTNSRKEAFLFVNDSEGQNEECLLICMRGV 963
R IQL+ GA P + G L G G V+R D++ + A ++H ++ +G+ + G +G G + EV +K RV FP FY+LVY D YQ L E WHV V ARLR+D+H+ GQ ADL+VRGD ++R+VRA+SS P EVSF+ A F LV G+YNR+ LR+RP LS+ +++I VHL+D D+ ++V W+ATAT PV+T+++DV++ KRI YSNPW+ R F+L SS+P ++RPR LEV +G++RL + +E LFVND E EEC L+ +RGV
Sbjct: 1249 RCIQLVYDGASPGIGIPSDPDGELLGDGAVARYDAFGMKAPRSALFLHTIDLSGNNR-----------------VVVEWREGVSGAGAN-PEVWLKYRVPPFPGTGEFYVLVYRDPYQAQLRELWHVHVNARLRLDLHATAGQAVTADLVVRGDSFTRRVRAYSSLPKEVSFDQAGEFALVAGSYNRIGLRYRPTGLSSVTKRISVHLIDADTQQLVCGWIATATTAAPVVTRTFDVDVTVDDEASKRIPYSNPWSRRRAFKLISSNPGLVRPRSARLEVEARASGYIRLALNGDAIDAGAVEEVLLFVNDDEDNTEECFLLRLRGV 1557
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXV1_9STRA) HSP 1 Score: 226 bits (575), Expect = 1.890e-60 Identity = 114/229 (49.78%), Postives = 151/229 (65.94%), Query Frame = 1
Query: 262 QEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLI 948
QE+ VK RVG++PS FYLL+Y+D Y L+E W + VQA LR+D+ + +GQ +LI++GD R+VR +SS P EV F P FQL+P A+NR+EL F + ++I V+LVDVDS E+VG+WL T PV+TK +DV LP G K+I+Y NPW+ RLF L SSDP I++PR L + G G GFLRL FA P K+ +LF+ND QNEECLL+
Sbjct: 3054 QEIFVKYRVGEYPSTGEFYLLLYEDMYHARLFEIWRICVQAMLRLDLQASMGQGVRNELIIKGDTMPRRVRCYSSQPHEVQFNPDRIFQLLPHAFNRIELLFCSMEIRIKQIVVNLVDVDSYELVGSWLLNTTTTEPVVTKVFDVTLPLGVPVLKKISYRNPWDDDRLFILRSSDPSIMKPRERKLLLPGYGDGFLRLAFA-PHSIACSKKVYLFINDGSDQNEECLLL 3281
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Uncharacterized (protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6W9_9STRA) HSP 1 Score: 225 bits (574), Expect = 2.590e-60 Identity = 108/229 (47.16%), Postives = 155/229 (67.69%), Query Frame = 1
Query: 262 QEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLI 948
QE+ K RVG++PS FYLL+Y+D Y LYE W + VQ+ LR+D+H+ +GQ +LI++GD R+VR +SS PA+V F P FQL+P A+NR+EL + + G+ ++ +++VDVDS E++G+WL A P++TK +DV LP G K+I+Y NPW S R+F L +SDP I++PR +L ++GG GFLRL FA P K+ +LF+ND QNEECLL+
Sbjct: 3377 QEIYFKYRVGEYPSSGEFYLLLYEDMYHAVLYEIWRLCVQSMLRLDLHATMGQGVRNELILKGDTMPRRVRCYSSQPAKVHFNPERIFQLLPHAFNRIELLYCSMDVGALQVLINVVDVDSHELIGSWLLNANTSEPLVTKVFDVTLPLGVPVLKKISYRNPWESDRMFVLRTSDPSIMKPREPTLRLSGGSDGFLRLAFA-PYSIPCTKKVYLFINDGSDQNEECLLL 3604
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1Z8_9STRA) HSP 1 Score: 224 bits (571), Expect = 5.640e-60 Identity = 128/318 (40.25%), Postives = 178/318 (55.97%), Query Frame = 1
Query: 1 RSIQLLPGGAPEHHLSKHGKGSLGVGGVSRDSYVVSEDGGAKYIHCVEEAGHQQGGXXXXXXXXXXXXXXAXXXXAMGGCAGGGVDVQEVLVKC-RVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLST-GSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLI 948
R ++LLPGG + G G++G ++V +G KY+H V+ G + G QE+L+K ++G FPS FY+L++DD ++ L E WHVIV +RLR DV + LGQ SP + V GD + R VRA++S E F P++ FQLVP A N + F PL G+RK HVHLVDVD+ ++V AW+ T A PP +TK YDV++ G A HK+I+Y NPWN R ++L SSDP ++RP+ L++ G F+RL+ A P R E FL VND GQNE+C +
Sbjct: 1569 RCVRLLPGGGTVD--AARGAGAVGP------THVPGANG-RKYVHLVDHGGR----------------VVVEWRESTDGA-------QEILIKYWKLGAFPSMGDFYILIFDDPWRCRLSEIWHVIVASRLRKDVQAKLGQASPIEFTVPGDNHLRHVRAYASNELETRFLPSSVFQLVPNAVNSFKASFTPLGAPGTRKTHVHLVDVDTKQLVAAWILTCVAAPPQVTKDYDVDVRVGEAAHKKISYENPWNRRRSYQLMSSDPNVMRPKVNELQIQPHGREFMRLYIA-PLDRAGRVEVFLMVNDERGQNEDCFRV 1853 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig770.15874.1 >prot_E_fasciculatus_S2_contig770.15874.1 ID=prot_E_fasciculatus_S2_contig770.15874.1|Name=mRNA_E_fasciculatus_S2_contig770.15874.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=246bp MGGCAGGGVDVQEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVback to top mRNA from alignment at E_fasciculatus_S2_contig770:19202..21299- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig770.15874.1 ID=mRNA_E_fasciculatus_S2_contig770.15874.1|Name=mRNA_E_fasciculatus_S2_contig770.15874.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2098bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig770:19202..21299- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig770:19202..21299- >mRNA_E_fasciculatus_S2_contig770.15874.1 ID=mRNA_E_fasciculatus_S2_contig770.15874.1|Name=mRNA_E_fasciculatus_S2_contig770.15874.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=738bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig770:19202..21299- (Ectocarpus fasciculatus EfasUO2)back to top |