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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1125 |
| Hectar predicted targeting category | signal peptide |
| Exons | 3 |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-00_001560.1 |
| Cds size | 1125 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842432.0896368-CDS-E_fasciculatus_S2_contig77:9675..10548 | 1696842432.0896368-CDS-E_fasciculatus_S2_contig77:9675..10548 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig77 9676..10548 - |
| 1696842432.1032057-CDS-E_fasciculatus_S2_contig77:10883..11010 | 1696842432.1032057-CDS-E_fasciculatus_S2_contig77:10883..11010 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig77 10884..11010 - |
| 1696842432.1134512-CDS-E_fasciculatus_S2_contig77:11613..11738 | 1696842432.1134512-CDS-E_fasciculatus_S2_contig77:11613..11738 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig77 11614..11738 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig77.15866.1 >prot_E_fasciculatus_S2_contig77.15866.1 ID=prot_E_fasciculatus_S2_contig77.15866.1|Name=mRNA_E_fasciculatus_S2_contig77.15866.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=375bp
MQQRRCATRRIALPLAFLLVLTVFLTCLEFAEGGRKQQAISRQRTKKSRA
GVGKDFSEFLLVIGAIMTCVIAPVFFFFLHSIYKDPASPELARACWNAVK
SKLLSYLGQPPVIPGSAVDTNNTLTSLSTPRAGRRRTPYANDSTDYVDMC
RGENGNSETPGASSASRRAPAANTQLHSAGNAITDRSYLAVPRPSSRDRS
RPRRYLDDDQREEAPYYGYAAAERRYHRKGEDVQWQPAPGYMSRYSSGAI
LPNQSGRGLKLEEDEFSAARGAQPPRWREFGGNGGDHTLPARGVRFLGEN
EARSSEPRRRVEWDPYPDDDDDDGVRKELHKPTVDDRMGRGVYKSTQSKR
TAARKARAVKGSMAGKTNGGRESL* back to topmRNA from alignment at E_fasciculatus_S2_contig77:9676..11738- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig77.15866.1 ID=mRNA_E_fasciculatus_S2_contig77.15866.1|Name=mRNA_E_fasciculatus_S2_contig77.15866.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2063bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig77:9676..11738- (Ectocarpus fasciculatus EfasUO2)
ATGCAGCAGAGGAGATGCGCGACCAGGCGCATAGCACTACCGCTCGCGTT
CCTGCTCGTCCTAACTGTTTTCTTGACCTGCCTGGAGTTCGCAGAGGGAG
GACGGAAGCAACAGGCCATTTCAAGGTAAACGCGCCGTCGCATGCTGCTG
TAGGCCCGTCGTGTCCACCTGTGACGCCAGATTGTCTTGAGTGTCGAGTC
GAAGTGGTTCGTTGGAAAGTTTCGAGGCCTATCTATGCATAGGCTCGTCG
GGCAAGGTTACGTCAGTACGTCATGTTGCAGTTTGCAATCGAATCGCAAA
GTGTCCTGGAGCTGACCACGAGGAAGGATGATCTTCACGCCATTCTGGTG
TGCGAAATACATGACAACTTAGCAAACTGTACTGGCCCAGTGCAAGGCAT
GATGGAAGTGGTTAAGCTTCGAAAGGGCGGAACACGACCTGTTGAATTAG
GTCTGAGCCCTACGCAGTGCTTGGTCGTCAGTCCGACGAAGATCGATATA
TATATGCTACTGCTGTGGGGTCATGGATACAGTCAATTTCATTTTTGATC
ACATGGCATTCTCCACGAAGAGCGTTCCTTTTGTACAACACCACCGTCAA
GCTTCCCCAACACTGAGTACAACAATAATTGTCGATAGAGGCCGCGTAGG
GAGGGATTACACGGTAATACAATAGGATATTCATACTGCCGTCTTGTCGT
CGTTGTCGGCTGCTCATCATGTATGCAGGCAACGGACCAAGAAATCCCGA
GCGGGTGTGGGGAAGGACTTCTCAGAGTTCCTGCTAGTGATCGGAGCTAT
TATGACTTGTGTGATCGCGCCAGTCTTTTTCTTTTTCCTCCACTCCATTT
ACAAGGTACGTTCCTTACCGACGACCCACTACCTGTGTTGCTGTGTAACT
GCTTCCCGCATATTGTAGTAGGGCAAAGTTATATGAAGTGCAGTACATTC
ACTTGCGATCGGGTACAAATGAGTATTGGACAGCCTCAACAAGGCGCCAC
CACCAGCGACACAGTCGATGACGACCACAGGGCACAGACCGAGTACTATA
GTACGATCGGACTGTTGTATGCAGCGCCCGGATCACTTTTAAATGGTACC
CAGCGGGTTTCGCATGGGTCATCCTAGTCTTGTCTAACTTGCCGCCACGA
TCGTGTGTGTCTTTCCCACCGAACGGCTTTCCGGACAAAGGACCCAGCGT
CTCCTGAGCTGGCGCGGGCATGCTGGAACGCCGTCAAGAGCAAGCTGCTT
TCCTATCTGGGACAGCCACCTGTGATACCCGGCTCCGCCGTTGATACGAA
CAACACGTTAACCTCTTTGTCAACCCCTAGAGCGGGCCGACGCCGTACCC
CCTACGCGAATGACAGCACCGACTACGTCGACATGTGCAGGGGCGAAAAC
GGCAACAGCGAGACCCCTGGGGCTTCCTCGGCTTCGCGCCGAGCCCCAGC
AGCTAACACGCAACTGCACTCCGCTGGCAACGCCATCACGGATCGATCTT
ATCTTGCTGTGCCTAGGCCGAGTAGTCGAGACCGATCCCGGCCCCGCCGA
TACCTTGATGATGATCAAAGGGAAGAAGCACCGTACTACGGCTACGCCGC
CGCCGAACGGCGCTACCACCGAAAGGGCGAAGATGTGCAATGGCAACCAG
CACCAGGGTACATGTCCCGTTACTCTTCAGGGGCAATTCTTCCCAATCAA
AGCGGTAGAGGCCTCAAACTGGAAGAGGACGAGTTCTCGGCGGCAAGGGG
GGCACAGCCTCCCAGGTGGCGGGAATTCGGCGGCAACGGCGGTGACCATA
CCCTCCCCGCAAGAGGCGTCAGATTTCTCGGTGAGAATGAAGCCCGCAGC
TCCGAACCGCGCCGGAGAGTGGAGTGGGATCCATACCCAGATGATGATGA
TGATGATGGTGTTCGCAAGGAGTTGCACAAACCAACGGTTGACGATCGTA
TGGGTCGTGGCGTGTACAAAAGCACACAGAGCAAACGGACGGCGGCAAGA
AAGGCGAGGGCCGTGAAAGGTTCGATGGCTGGAAAGACGAACGGTGGGAG
AGAGTCATTGTAA back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig77:9676..11738- >mRNA_E_fasciculatus_S2_contig77.15866.1 ID=mRNA_E_fasciculatus_S2_contig77.15866.1|Name=mRNA_E_fasciculatus_S2_contig77.15866.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1125bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig77:9676..11738- (Ectocarpus fasciculatus EfasUO2)
ATGCAGCAGAGGAGATGCGCGACCAGGCGCATAGCACTACCGCTCGCGTT
CCTGCTCGTCCTAACTGTTTTCTTGACCTGCCTGGAGTTCGCAGAGGGAG
GACGGAAGCAACAGGCCATTTCAAGGCAACGGACCAAGAAATCCCGAGCG
GGTGTGGGGAAGGACTTCTCAGAGTTCCTGCTAGTGATCGGAGCTATTAT
GACTTGTGTGATCGCGCCAGTCTTTTTCTTTTTCCTCCACTCCATTTACA
AGGACCCAGCGTCTCCTGAGCTGGCGCGGGCATGCTGGAACGCCGTCAAG
AGCAAGCTGCTTTCCTATCTGGGACAGCCACCTGTGATACCCGGCTCCGC
CGTTGATACGAACAACACGTTAACCTCTTTGTCAACCCCTAGAGCGGGCC
GACGCCGTACCCCCTACGCGAATGACAGCACCGACTACGTCGACATGTGC
AGGGGCGAAAACGGCAACAGCGAGACCCCTGGGGCTTCCTCGGCTTCGCG
CCGAGCCCCAGCAGCTAACACGCAACTGCACTCCGCTGGCAACGCCATCA
CGGATCGATCTTATCTTGCTGTGCCTAGGCCGAGTAGTCGAGACCGATCC
CGGCCCCGCCGATACCTTGATGATGATCAAAGGGAAGAAGCACCGTACTA
CGGCTACGCCGCCGCCGAACGGCGCTACCACCGAAAGGGCGAAGATGTGC
AATGGCAACCAGCACCAGGGTACATGTCCCGTTACTCTTCAGGGGCAATT
CTTCCCAATCAAAGCGGTAGAGGCCTCAAACTGGAAGAGGACGAGTTCTC
GGCGGCAAGGGGGGCACAGCCTCCCAGGTGGCGGGAATTCGGCGGCAACG
GCGGTGACCATACCCTCCCCGCAAGAGGCGTCAGATTTCTCGGTGAGAAT
GAAGCCCGCAGCTCCGAACCGCGCCGGAGAGTGGAGTGGGATCCATACCC
AGATGATGATGATGATGATGGTGTTCGCAAGGAGTTGCACAAACCAACGG
TTGACGATCGTATGGGTCGTGGCGTGTACAAAAGCACACAGAGCAAACGG
ACGGCGGCAAGAAAGGCGAGGGCCGTGAAAGGTTCGATGGCTGGAAAGAC
GAACGGTGGGAGAGAGTCATTGTAA back to top
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