mRNA_E_fasciculatus_S2_contig7671.15842.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7671.15842.1 vs.
Match: NAGPA (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI16_ECTSI) HSP 1 Score: 671 bits (1731), Expect = 3.140e-227 Identity = 470/620 (75.81%), Postives = 481/620 (77.58%), Query Frame = 1
Query: 4 LSPASDTSRAFEAVRRTAPLLDGESPEDARVRLDLDAREEAWRAAGXXXXXXXXXXXXXXXXXXXXXXXXGGSCAVGHLVGAGQVYQAEEGTALVSFGIRGDSFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXX--GGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVHLDPPPLIEGAGGVDSTPSPTLQPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDNTEEVRLQWTRELCGGNSTGNATSLWEHLDDVEESVLRYKIAFWVAAVLGMASLYLNIQHQKSNSSSTSRSAELGGSAYSRQLQQQ-HVGLVNGGTVKTGTGPT-SPTGIVEMVGRGGGSKRGSRSSRRKRGSSTGGG----YARVNGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLD--AAAMAINPFGGGGRGGARGGSGEVYDEEGTWA 1833
LSPAS TSR FEAVRRTAPLLDGESPEDARVRLDLD+RE AWRAAG GGSCAVGHLVGAGQV+QAEEGTA+VSFG+RGDSFVVGTITAEEV DEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLD D XXXXXXXXXXXXXXXXXXXXXX GGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPA PCST E DSDSYGGF DGS LPRCEIPVSSIVCVHLDPPPLIEGA G+D TPSP+LQP SXXXXXXXXXXXXXXXXXXXXXXXXXXX SGDNTEE RL+WTRELCGGN TGNATSLWEHLD+VEESVLRYKIAFWVAAVLGMASLYLNIQHQKSNSSSTSRSAELGGSAYSRQLQQQ HVGLVNGGTVKTGT T SPTGIVEMVGRGG YAR+NGGD XXXXXXXXXXXX XXXXXX D AAAM INPF GGGRG GS ++YDEEGTWA
Sbjct: 546 LSPASQTSRGFEAVRRTAPLLDGESPEDARVRLDLDSREAAWRAAGGGNGCQAAAAGGMLPPLSGD----GGSCAVGHLVGAGQVFQAEEGTAMVSFGVRGDSFVVGTITAEEVLDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDDDXXXXXXXXXXXXXXXXXXXXXXXXEGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAGPCSTSAE---------DSDSYGGFRDGSALPRCEIPVSSIVCVHLDPPPLIEGAEGIDGTPSPSLQPTSXXXXXXXXXXXXXXXXXXXXXXXXXXX-SGDNTEEARLRWTRELCGGNGTGNATSLWEHLDNVEESVLRYKIAFWVAAVLGMASLYLNIQHQKSNSSSTSRSAELGGSAYSRQLQQQQHVGLVNGGTVKTGTSSTKSPTGIVEMVGRGGXXXXXXXXXXXXXXXXXXXXXXXXYARLNGGDAEWDEXXXXXXXXXXXXMDSEEEVDLGLAPTRTSSRSKREKGKGGRLRKALAKVSRGXXXXXXQGGGADLHAAAMGINPFRGGGRGDPPRGSRKIYDEEGTWA 1151
BLAST of mRNA_E_fasciculatus_S2_contig7671.15842.1 vs.
Match: NAGPA (domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPM3_9PHAE) HSP 1 Score: 462 bits (1190), Expect = 2.570e-155 Identity = 325/432 (75.23%), Postives = 335/432 (77.55%), Query Frame = 1
Query: 280 ALVSFGIRGDSFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVHLDPPPLIEGAGGVDSTPSPTLQPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDNTEEVRLQWTRELCGGNSTGNATSLWEHLDDVEESVLRYK---------------------------IAFWV---------AAVLGMASLYLNIQHQKSNSSSTSRSAELGGSAYSRQLQQQ-----HVGLVNGGTVKTGTGPT-SPTGIVEMVGRGGG 1449
A+VSFG+RGDSFVVGTITAEEV DE NPFQNLISGAGWLVRAGVNHVEASARDGHLD+LLD D XXXXXXXXXXXXXXXXXXXXX GGALDDLLVAKLARTAIGHDSEGRLILLQ G AAGSDQDTAIPDGLDLSELAD+LVEAGAVNAINLVGGAPSAMM DS SYGGF DGS LPRCEIPVSSIVCVHLDPPPLIEGA GVDSTPSP+LQP SXXXXXXXXXXXXXXXXXXXXXXXXXXX SGDNTEEVRLQWTRELCG N TGNATSLWEHLD VEESVLRYK + V AV+GMASLYLNIQHQKS+S ST+RSAELGG AYSRQLQ HVGLVNG TVKTGT T SPTGIVEM+GRGGG
Sbjct: 38 AMVSFGVRGDSFVVGTITAEEVLDEHNPFQNLISGAGWLVRAGVNHVEASARDGHLDVLLDDDXXXXXXXXXXXXXXXXXXXXXXEGGALDDLLVAKLARTAIGHDSEGRLILLQ--GKAAGSDQDTAIPDGLDLSELADMLVEAGAVNAINLVGGAPSAMMEEW------------------------DSGSYGGFTDGSALPRCEIPVSSIVCVHLDPPPLIEGAEGVDSTPSPSLQPTSXXXXXXXXXXXXXXXXXXXXXXXXXXX-SGDNTEEVRLQWTRELCGANGTGNATSLWEHLDSVEESVLRYKGDELPEEAELEIATDDEMLVVVPPRREVLMMVLNKEPTCLSCAVMGMASLYLNIQHQKSSSPSTARSAELGGGAYSRQLQXXXXXXXHVGLVNGATVKTGTSSTKSPTGIVEMIGRGGG 442
BLAST of mRNA_E_fasciculatus_S2_contig7671.15842.1 vs.
Match: N-acetylglucosamine-1-phosphodiester (alpha-N-acetylglucosaminidase n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FDC4B) HSP 1 Score: 98.6 bits (244), Expect = 6.120e-18 Identity = 64/201 (31.84%), Postives = 103/201 (51.24%), Query Frame = 1
Query: 217 GSCAVGHLVGAGQVYQAEEGTALVSFGIRGDSFVV-GTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLV 816
G+C +G++V G++ +G +FGIR D +V G ++ V D++NPF L++G WLVR G +V AS + D+ G++D + ARTAIGHD++GR++++Q G + G+DL A++L++ G VNAINL GG + M+VNGS + P++ C +
Sbjct: 160 GNC-LGNIVSNGKLVMDADGVQNANFGIRKDGTIVTGYLSENTVLDQENPFVQLVTGVIWLVRNGEVYVNASKKAECEDL--------------------------QESGSVDLFVNVLAARTAIGHDAQGRVVIVQVDGKT--------LQRGMDLYSFAELLIKYGLVNAINLDGGGSTTMVVNGSVVNYPSDKCGDFI 325
BLAST of mRNA_E_fasciculatus_S2_contig7671.15842.1 vs.
Match: LOW (QUALITY PROTEIN: N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00096B63C3) HSP 1 Score: 96.7 bits (239), Expect = 1.040e-17 Identity = 73/239 (30.54%), Postives = 113/239 (47.28%), Query Frame = 1
Query: 217 GSCAVGHLVGAGQVYQAEEGTALVSFGIRGD-SFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVH 930
G+C +G++V G++ ++ G +FGI+ D S VVG I EE+ ++ NPF+ L++G WLVR G N+V S + DH+D G +D + AR+AIGHD +GR++L + G G +L E ADVL++ G VNAINL GG + ++ +G + P++ C D + RC VS+++CVH
Sbjct: 183 GNC-LGNIVSDGRLVKSANGVQNANFGIKEDGSIVVGYIPEEELHNQTNPFRQLVTGVIWLVRNGTNYVNESK----IMECSDHEDT----------------------GPMDTFVNVISARSAIGHDDKGRVVLARVEGQTHVR--------GANLYEFADVLIKRGVVNAINLDGGGSNTLVQDGILLNYPSDHC-----------------------DHESQYRCAREVSTVICVH 363
BLAST of mRNA_E_fasciculatus_S2_contig7671.15842.1 vs.
Match: N-acetylglucosamine-1-phosphodiester (alpha-N-acetylglucosaminidase-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016043331) HSP 1 Score: 95.1 bits (235), Expect = 1.440e-17 Identity = 75/239 (31.38%), Postives = 108/239 (45.19%), Query Frame = 1
Query: 217 GSCAVGHLVGAGQVYQAEEGTALVSFGIRGD-SFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVH 930
G+C +G++V GQ Q G +FGIR D + VVG ++ ++V E NPF L+SG WLVR +V S DI G LD + ARTA+GHD EGR++L+ G G++L E AD L+ G VNA+NL GG + M++NG+ + P++ C+ D ++ RC VS+I+CVH
Sbjct: 132 GAC-LGNVVTDGQRVQDSGGIQNANFGIRKDGTIVVGYLSEQDVLREDNPFVQLVSGVIWLVRNATVYVNESRTTECADI--------------------------QETGTLDRFVNVVSARTAVGHDEEGRVVLVHIEGQTGDR--------GVNLWEFADYLLSLGLVNAVNLDGGGSATMVINGTVVNYPSDRCA-------------DDRAF----------RCARAVSTILCVH 312
BLAST of mRNA_E_fasciculatus_S2_contig7671.15842.1 vs.
Match: N-acetylglucosamine-1-phosphodiester (alpha-N-acetylglucosaminidase n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFAEA46) HSP 1 Score: 97.4 bits (241), Expect = 1.560e-17 Identity = 72/234 (30.77%), Postives = 104/234 (44.44%), Query Frame = 1
Query: 232 GHLVGAGQVYQAEEGTALVSFGIRGD-SFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVH 930
G++V G++ Q+ G FGIR D + V G ++ EEV D++NPF L+SG WL+R G ++ S G D + A ARTA+GHD GRLI+ + G + GL L ELAD+L E G +NAIN+ GG S M+VNG+ P++ C D+D + C +S+++CVH
Sbjct: 170 GNVVSDGKLVQSAGGLQNAQFGIRKDGTLVFGYLSEEEVLDKKNPFVQLVSGVVWLLRNGEVYINQSKT--------------------------AECEKTEETGTFDVFINALSARTAVGHDKSGRLIMFHSDGKTGDT--------GLTLWELADLLKEKGVINAINMDGGGSSTMVVNGTLASYPSDKCK-------------DNDGW----------HCARSISTVLCVH 346
BLAST of mRNA_E_fasciculatus_S2_contig7671.15842.1 vs.
Match: N-acetylglucosamine-1-phosphodiester (alpha-N-acetylglucosaminidase n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI0008547745) HSP 1 Score: 97.1 bits (240), Expect = 2.190e-17 Identity = 75/242 (30.99%), Postives = 112/242 (46.28%), Query Frame = 1
Query: 229 VGHLVGAGQVYQAEEGTALVSFGIRGD-SFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVH---LDPP 942
+G++V G++ Q+ +G FGIR D + V G ++ EEV D +NPF L+SG WL+R G ++ S + ++ D+ G D+ + ARTA+GHD++GRLIL G AG GL L E+A+ L G NAINL GG + +++NG+ P++ C ++ RC+ VS+IVCVH DPP
Sbjct: 183 LGNVVSNGRLVQSSKGIQNAQFGIREDGTMVFGYLSEEEVLDTENPFVQLVSGVVWLLRNGEVYIGQSKK-------VECDETQTT-------------------GNFDEFIDTMSARTAVGHDTKGRLILFHADGQTAGR--------GLSLWEMANFLKAQGVYNAINLDGGGSATLVLNGTLASYPSDHCLN-----------------------DSMWRCQRSVSTIVCVHEPYCDPP 367
BLAST of mRNA_E_fasciculatus_S2_contig7671.15842.1 vs.
Match: N-acetylglucosamine-1-phosphodiester (alpha-N-acetylglucosaminidase n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FE62C) HSP 1 Score: 96.7 bits (239), Expect = 2.400e-17 Identity = 80/252 (31.75%), Postives = 110/252 (43.65%), Query Frame = 1
Query: 217 GSCAVGHLVGAGQVYQAEEGTALVSFGIRGD-SFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVH--LDPPPLIEGAG 963
G C +G++V GQ+ Q +G FGIR D + V G ++ EEV E+NPF L+SG WL+R G +V S RD G D + ARTA+GHD EGRL+LL G G GL+L E+A+ L + G VNAINL GG + +++NG+ P++ C + RC +S+I+CV L PP G G
Sbjct: 169 GEC-LGNIVSDGQLVQTSKGLQNAQFGIRQDGTLVFGYLSEEEVLAEENPFVQLVSGVVWLLRDGEVYVNQS-RD-------------------------LECSKTQTTGTFDTFIHTISARTAVGHDKEGRLVLLHVDGQTGGR--------GLNLWEMAEFLKQRGVVNAINLDGGGSATLVLNGTLASYPSDHCQP-----------------------DPMWRCPRQISTIMCVREPLCHPPDCSGRG 362
BLAST of mRNA_E_fasciculatus_S2_contig7671.15842.1 vs.
Match: N-acetylglucosamine-1-phosphodiester (alpha-N-acetylglucosaminidase-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBA23F) HSP 1 Score: 94.7 bits (234), Expect = 3.220e-17 Identity = 69/239 (28.87%), Postives = 105/239 (43.93%), Query Frame = 1
Query: 217 GSCAVGHLVGAGQVYQAEEGTALVSFGIRGD-SFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVH 930
GSC +G++V G++ +G FGIR D S G ++ ++ D+ NPF L+ G WLVR G ++V S G +D+ + AR A+GHD +GR++L+Q G G +L E A L++ G +NAINL GG + +VNG+ I P + C+ GS + RC+ PVS+++CVH
Sbjct: 157 GSC-LGNVVSDGRLVLDSQGIQNAHFGIREDGSLFFGYLSESDLVDKTNPFVQLVGGVVWLVRNGQSYVNTSR--------------------------YIECGDTEETGTVDEFIRVVAARMAVGHDKDGRVVLIQVDGETWKK--------GANLDEFAAFLIDLGIINAINLDGGGSATYVVNGTTINYPTDKCA-----------------------GSDMYRCDRPVSTVLCVH 337
BLAST of mRNA_E_fasciculatus_S2_contig7671.15842.1 vs.
Match: Hypothetical (protein n=2 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A625_9DINO) HSP 1 Score: 93.6 bits (231), Expect = 4.300e-17 Identity = 81/240 (33.75%), Postives = 112/240 (46.67%), Query Frame = 1
Query: 217 GSCAVGHLVGAGQVYQAEE-GTALVSFGIRGDSFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLA-RTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVH 930
G+C +G+LV G V Q + V+FGIR FV+G T EE+Q F+ ++SG WLVR G ++V+ R+ + + D LA RTA+G D +GRLI+LQ G+ A + GL++ +LAD+L+E GAV+AINL GG SAM +G I P SD D S +CE PVS+I+CVH
Sbjct: 80 GAC-IGNLVSDGVVIQTVPLAQSNVNFGIRDGKFVIGYFTPEELQG----FEQVVSGVTWLVRDGKSYVQQGWREANTTVQTS-----------------------------GDKYATNLASRTAVGVDKDGRLIILQIDGSIAVGH----LKRGLNMFQLADLLIENGAVHAINLDGGGSSAMARDGVLINYP-------------------SDMRPPSCDASGKHQCERPVSTILCVH 262 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7671.15842.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7671.15842.1 >prot_E_fasciculatus_S2_contig7671.15842.1 ID=prot_E_fasciculatus_S2_contig7671.15842.1|Name=mRNA_E_fasciculatus_S2_contig7671.15842.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=612bp SLSPASDTSRAFEAVRRTAPLLDGESPEDARVRLDLDAREEAWRAAGGGNback to top mRNA from alignment at E_fasciculatus_S2_contig7671:295..5848+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7671.15842.1 ID=mRNA_E_fasciculatus_S2_contig7671.15842.1|Name=mRNA_E_fasciculatus_S2_contig7671.15842.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5554bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7671:295..5848+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7671:295..5848+ >mRNA_E_fasciculatus_S2_contig7671.15842.1 ID=mRNA_E_fasciculatus_S2_contig7671.15842.1|Name=mRNA_E_fasciculatus_S2_contig7671.15842.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1836bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7671:295..5848+ (Ectocarpus fasciculatus EfasUO2)back to top |