mRNA_E_fasciculatus_S2_contig764.15806.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig764.15806.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH84_ECTSI) HSP 1 Score: 383 bits (984), Expect = 5.700e-134 Identity = 202/211 (95.73%), Postives = 206/211 (97.63%), Query Frame = 1
Query: 1 MTSSPGHSSGSQGQIILGSKSFTRKMIIKEMGFVPIVRSADIDEAAIGDRTADPADLVLQLGLAKAEALLPALKAEVDCGELSTSLLLTGDQVVVHDGRVLEKPADEDEVRRNIASYARSPCRTVGSAVLTDISTGQQFSGVDTAEIFFKEVPESVVTKLCGEGTVLQCAGGLMVEHPLVEPFIARIDGSMDSVMGLSKALVLKLLEKHKQ 633
MTSSPGHSS QGQIILGSKSFTRKMII+EMGFVPIVRSADI+EAAIGDRTADPADLVLQLGLAKAEALLPALKAE D GELSTS LLTGDQVVVHDGR+LEKPADEDEVRRNIASYARSPCRTVGSAVLTDISTGQQFSGVDTAEIFFKEVPESVVTKLCGEGTVLQCAGGLMVEHPLVEPFIARIDGSMDSVMGLSKALVL+LLEKHKQ
Sbjct: 1 MTSSPGHSSN-QGQIILGSKSFTRKMIIEEMGFVPIVRSADINEAAIGDRTADPADLVLQLGLAKAEALLPALKAEADRGELSTSWLLTGDQVVVHDGRILEKPADEDEVRRNIASYARSPCRTVGSAVLTDISTGQQFSGVDTAEIFFKEVPESVVTKLCGEGTVLQCAGGLMVEHPLVEPFIARIDGSMDSVMGLSKALVLELLEKHKQ 210
BLAST of mRNA_E_fasciculatus_S2_contig764.15806.1 vs.
Match: Inosine (triphosphate pyrophosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPK2_9STRA) HSP 1 Score: 244 bits (622), Expect = 6.380e-79 Identity = 128/195 (65.64%), Postives = 158/195 (81.03%), Query Frame = 1
Query: 40 QIILGSKSFTRKMIIKEMGFVPIVRSADIDEAAIGDRTADPADLVLQLGLAKAEALLPALKAEVDCGELSTSLLLTGDQVVVHDGRVLEKPADEDEVRRNIASYARSPCRTVGSAVLTDISTG-QQFSGVDTAEIFFKEVPESVVTKLCGEGTVLQCAGGLMVEHPLVEPFIARIDGSMDSVMGLSKALVLKLLE 621
+IILGSKS TRK+II+EMG+ I+R+ADIDE AIGDR +DPA LVL++G AKA+ALLP+L LLLTGDQVVVHDGRVLEKP D EVRRNIA+YA SPCRTVGSAV+T++ G ++ SGVDTA I+F+ +P+SVV +LC E +L CAGGLM+EHPLVEP+I RI+G++DSVMGLSK LV +LL+
Sbjct: 8 KIILGSKSATRKLIIEEMGWEAIIRTADIDEKAIGDRASDPAQLVLEIGTAKADALLPSLADAA--ARHGARLLLTGDQVVVHDGRVLEKPHDYAEVRRNIAAYALSPCRTVGSAVITELGAGGRRVSGVDTACIYFRPIPDSVVDELCKEEEILWCAGGLMIEHPLVEPYIERIEGTIDSVMGLSKPLVQRLLD 200
BLAST of mRNA_E_fasciculatus_S2_contig764.15806.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TL15_HETAK) HSP 1 Score: 210 bits (534), Expect = 5.670e-65 Identity = 117/199 (58.79%), Postives = 143/199 (71.86%), Query Frame = 1
Query: 40 QIILGSKSFTRKMIIKEMGFVPIVRSADIDEAAIGDRTAD----PADLVLQLGLAKAEALLPALKAEVDCGELSTSLLLTGDQVVVHDGRVLEKPADEDEVRRNIASYARSPCRTVGSAVLTDISTGQQFSGVDTAEIFFKEVPESVVTKLCGEGTVLQCAGGLMVEHPLVEPFIARIDGSMDSVMGLSKALVLKLLEK 624
+IILGSKSFTR+MI+KEMG PI+R ADIDE AIGDR+AD P LVL LG AKA+A+L + D G LLLTGDQVVVH+GR+LEKP +E R+ I YAR+P RTVGSAVLTD++TG++ GVDTA I F P VV +L + L CAGGLMVEH LV+P++ IDG++DSVMGLSK L L+ +
Sbjct: 44 KIILGSKSFTRQMIVKEMGMEPIIRVADIDEKAIGDRSADTGWDPERLVLALGNAKADAILESGLQPGDHG-----LLLTGDQVVVHEGRILEKPTSLEEARQFIEGYARAPPRTVGSAVLTDLATGRRLQGVDTATIRFAPFPPEVVDRLLADEMTLHCAGGLMVEHELVQPYLEGIDGTVDSVMGLSKRLTETLIRR 237
BLAST of mRNA_E_fasciculatus_S2_contig764.15806.1 vs.
Match: Uncharacterized (protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EZT5_VITBC) HSP 1 Score: 205 bits (522), Expect = 5.530e-63 Identity = 112/198 (56.57%), Postives = 138/198 (69.70%), Query Frame = 1
Query: 43 IILGSKSFTRKMIIKEMGFVPIVRSADIDEAAIGDRTADPADLVLQLGLAKAEALLPALKAEVDCGELSTSLLLTGDQVVVHDGRVLEKPADEDEVRRNIASYARSPCRTVGSAVLTDISTGQQFSGVDTAEIFFKEVPESVVTKLCGEGTVLQCAGGLMVEHPLVEPFIARIDGSMDSVMGLSKALVLKLLEKHKQK 636
+I+GSKS TR+ I+ EMGF + SADIDE +GDR + P++LVL++ AKA+ALL L E +LLTGDQVVV GR+ EKP D E R I Y RSPC+TVGS VLTD+ T Q SGVDTA I K +P+ ++ KL EG +L CAGGLM+EHPLVEP+I RIDG+ DSV+GLSKALV LL +QK
Sbjct: 62 LIVGSKSKTRRQILTEMGFDLHLESADIDEKQVGDRASCPSELVLEVAKAKAQALLDKLANT----ESPYRILLTGDQVVVWKGRIREKPHDGAEAREFIEGYGRSPCQTVGSCVLTDLHTRTQVSGVDTATIHIKPIPDDIIQKLIDEGDILHCAGGLMIEHPLVEPYIERIDGAFDSVLGLSKALVDSLLIDLRQK 255
BLAST of mRNA_E_fasciculatus_S2_contig764.15806.1 vs.
Match: Uncharacterized (protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XTF4_MARPO) HSP 1 Score: 185 bits (470), Expect = 7.210e-56 Identity = 101/195 (51.79%), Postives = 133/195 (68.21%), Query Frame = 1
Query: 40 QIILGSKSFTRKMIIKEMGFVPIVRSADIDEAAIGDRTADPADLVLQLGLAKAEALLPALKA-EVDCGELSTSLLLTGDQVVVHDGRVLEKPADEDEVRRNIASYARSPCRTVGSAVLTDISTGQQFSGVDTAEIFFKEVPESVVTKLCGEGTVLQCAGGLMVEHPLVEPFIARIDGSMDSVMGLSKALVLKLLE 621
+IILGS S TR+ I+KEMG + +ADIDE++I R P DLV+ L AKA+A+L L E D +LL+T DQVVVH+G +LEKP +E RR I Y+RSP RTVG+ ++T++STG GVDTAEI+F +PE V+T L EG+V AGGL+VEHPLV P + + G++DSVMGL K L L L++
Sbjct: 8 KIILGSSSQTRRAIMKEMGLEFEILTADIDESSI--RREKPEDLVMALAEAKAQAILARLATKESDADSAQQTLLITADQVVVHEGNILEKPRTSEEARRFIEGYSRSPARTVGAVLVTNLSTGVSKGGVDTAEIYFHSIPEHVITTLIEEGSVFWAAGGLLVEHPLVSPLVNAMVGTIDSVMGLPKELTLSLID 200
BLAST of mRNA_E_fasciculatus_S2_contig764.15806.1 vs.
Match: Hypothetical (protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZRT4_9RHOD) HSP 1 Score: 184 bits (468), Expect = 3.410e-55 Identity = 105/200 (52.50%), Postives = 133/200 (66.50%), Query Frame = 1
Query: 40 QIILGSKSFTRKMIIKEMGFVPIVRSADIDEAAIGDRTADPADLVLQLGLAKAEALLPALKAEVDCGELSTSLLLTGDQVVVHDGRVLEKPADEDEVRRNIASYARSPCRTVGSAVLTDISTGQQFSGVDTAEIFFKEVPESVVTKLCGEGTVLQCAGGLMVEHPLVEPFIARIDGSMDSVMGLSKALVLKLLEKHKQKA 639
++ILGS S +RK I+ EMG V ADIDE AI R DPA LV LG KA+A+L + + LLTGDQVVVH+G++LEKP DE E R I Y R+P RTVGS V+T++ TG++F +DTAE++F E+P V+ KL EG V CAGGL VE PLV ++ I GSMDSVMGLSKA+V +LL+K + A
Sbjct: 32 KLILGSGSASRKEILGEMGLEFEVLKADIDERAI--RHEDPATLVSILGNKKADAILERMNSHGVPEYEGEVFLLTGDQVVVHNGKILEKPLDEKEARTFIEGYNRAPARTVGSIVITNVKTGERFESLDTAEVYFHEIPGEVIDKLIEEGEVFYCAGGLKVEDPLVSRYVDHIAGSMDSVMGLSKAIVEQLLKKAMESA 229
BLAST of mRNA_E_fasciculatus_S2_contig764.15806.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WYZ0_9CHLO) HSP 1 Score: 178 bits (452), Expect = 6.390e-53 Identity = 106/208 (50.96%), Postives = 134/208 (64.42%), Query Frame = 1
Query: 31 SQGQIILGSKSFTRKMIIKEM----GFVPIVRSADIDEAAIGDRTADPADLVLQLGLAKAEALLPALKAEVDC-GELSTS-------LLLTGDQVVVHDGRVLEKPADEDEVRRNIASYARSPCRTVGSAVLTDISTGQQFSGVDTAEIFFKEVPESVVTKLCGEGTVLQCAGGLMVEHPLVEPFIARIDGSMDSVMGLSKALVLKLL 618
S+ +IILGS S +RK I+ ++ GF V++ADIDE AI R DP LVL LG AK +A+L L AE G +S+S L+T DQVVVH GR+LEKP +E+E R I Y SP TVGS V T +STG+ + VD + I +PE V+TKL EG + CAGGLM+EHPLV P+I +I+G+ D V GLSKALV KLL
Sbjct: 7 SKPKIILGSASSSRKKIMDDLASQYGFNYTVKTADIDEKAI--RFQDPHQLVLALGHAKRDAILSKLAAETSTSGSISSSEDHNTNAYLITCDQVVVHGGRILEKPENENECREFIRGYGESPASTVGSVVCTSLSTGRSYEEVDVSHIHIATIPEEVITKLVEEGACMWCAGGLMIEHPLVSPYIQKIEGTEDGVRGLSKALVTKLL 212
BLAST of mRNA_E_fasciculatus_S2_contig764.15806.1 vs.
Match: Septum (formation MAF n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U4K7_CHLSO) HSP 1 Score: 178 bits (452), Expect = 1.200e-52 Identity = 102/198 (51.52%), Postives = 133/198 (67.17%), Query Frame = 1
Query: 40 QIILGSKSFTRKMIIKEM----GFVPIVRSADIDEAAIGDRTADPADLVLQLGLAKAEALLPALKAEVD-CGELSTSLLLTGDQVVVHDGRVLEKPADEDEVRRNIASYARSPCRTVGSAVLTDISTGQQFSGVDTAEIFFKEVPESVVTKLCGEGTVLQCAGGLMVEHPLVEPFIARIDGSMDSVMGLSKALVLKLL 618
+IILG+ S +R+ I+ E+ GF + ADIDE AI R D LVL+L AKA+A+ L+A D G+ LL+T DQVV+H+G++LEKP DE E RR IA Y R+P TVGS VLTD+++G+ + GVD A I F +P V +L EG V CAGGLMVEH LV+P + R+DGS+DSVMGL K L+L+LL
Sbjct: 40 RIILGTGSSSRRAIMDELAARYGFKYEIAKADIDEKAI--RHEDAQHLVLRLAHAKADAIRAKLQAAADEAGQPLDGLLVTCDQVVLHEGQILEKPEDEAEARRYIAGYGRAPASTVGSVVLTDLASGRNWEGVDVATIHFAPIPGDSVDRLIAEGEVFWCAGGLMVEHELVQPHVIRMDGSLDSVMGLDKQLLLRLL 235
BLAST of mRNA_E_fasciculatus_S2_contig764.15806.1 vs.
Match: Probable (nucleotide binding protein Maf n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1UNE1_CYAM1) HSP 1 Score: 177 bits (448), Expect = 1.530e-52 Identity = 97/197 (49.24%), Postives = 133/197 (67.51%), Query Frame = 1
Query: 40 QIILGSKSFTRKMIIKEMGFVPIVRSADIDEAAIGDRTADPADLVLQLGLAKAEALLPALKAEVDCGELSTS--LLLTGDQVVVHDGRVLEKPADEDEVRRNIASYARSPCRTVGSAVLTDISTGQQFSGVDTAEIFFKEVPESVVTKLCGEGTVLQCAGGLMVEHPLVEPFIARIDGSMDSVMGLSKALVLKLLEK 624
++ILGS S +R+ ++KE+G+ + IDE AI R + LV LG AKA+AL+ LK E + LLLTGDQVVVH GR+LEKP D E R+ IASYA +P TVGS V++++STG+++ +D AE++F +PESVV +L EG V C+GGLMVEHPL+ F+ I G++DSVMGL+K L L+E+
Sbjct: 9 RLILGSSSRSRQQLLKELGYEFSILKPGIDEEAI--RHPEAEQLVRLLGNAKADALVKMLKNEKGSSRTTAEPLLLLTGDQVVVHQGRILEKPQDPAEARQFIASYANAPAITVGSIVVSNLSTGKRYEAIDRAEVYFHPIPESVVERLIAEGAVFACSGGLMVEHPLLTKFVHHIVGTVDSVMGLNKDLTRALIER 203
BLAST of mRNA_E_fasciculatus_S2_contig764.15806.1 vs.
Match: Predicted (protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A8JHD0_CHLRE) HSP 1 Score: 176 bits (445), Expect = 4.770e-52 Identity = 99/193 (51.30%), Postives = 127/193 (65.80%), Query Frame = 1
Query: 40 QIILGSKSFTRKMIIKEMGFVPIVRSADIDEAAIGDRTADPADLVLQLGLAKAEALLPALKAEVDCGELSTSLLLTGDQVVVHDGRVLEKPADEDEVRRNIASYARSPCRTVGSAVLTDISTGQQFSGVDTAEIFFKEVPESVVTKLCGEGTVLQCAGGLMVEHPLVEPFIARIDGSMDSVMGLSKALVLKLL 618
+I+LGS SF RK I+ E GF VR+ADIDE AI D + P LV L AK EA++ +KA GE LL+T DQVVVH+ R+LEKP+ DE I Y RSP TVG+ + TD+++G+ V+T+ I F+ +PE V +L EG V CAGGLM+EHPLVEP I R+DG+ SVMGL K LVL+L+
Sbjct: 17 RILLGSASFARKQIMTEHGFTYEVRTADIDEKAIRDPS--PEMLVRLLARAKREAIIAKMKA---AGEPLQGLLITCDQVVVHEDRILEKPSSVDEAHEYIDGYGRSPASTVGAVLATDLASGRAAEDVETSYIHFRPIPEDVRARLIEEGEVFYCAGGLMIEHPLVEPHIERMDGTQCSVMGLPKHLVLRLM 204 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig764.15806.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig764.15806.1 >prot_E_fasciculatus_S2_contig764.15806.1 ID=prot_E_fasciculatus_S2_contig764.15806.1|Name=mRNA_E_fasciculatus_S2_contig764.15806.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=214bp MTSSPGHSSGSQGQIILGSKSFTRKMIIKEMGFVPIVRSADIDEAAIGDRback to top mRNA from alignment at E_fasciculatus_S2_contig764:16985..20914+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig764.15806.1 ID=mRNA_E_fasciculatus_S2_contig764.15806.1|Name=mRNA_E_fasciculatus_S2_contig764.15806.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3930bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig764:16985..20914+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig764:16985..20914+ >mRNA_E_fasciculatus_S2_contig764.15806.1 ID=mRNA_E_fasciculatus_S2_contig764.15806.1|Name=mRNA_E_fasciculatus_S2_contig764.15806.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=642bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig764:16985..20914+ (Ectocarpus fasciculatus EfasUO2)back to top |