mRNA_E_fasciculatus_S2_contig764.15805.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig764.15805.1
Unique NamemRNA_E_fasciculatus_S2_contig764.15805.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig764.15805.1 vs.
Match: Thioesterase (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRN7_9PHAE)

HSP 1 Score: 422 bits (1085), Expect = 2.870e-146
Identity = 204/230 (88.70%), Postives = 216/230 (93.91%), Query Frame = 1
Query:    1 MEDDRDGDSCNGSVPGWGGEEVQFTDGWVTNGAGDSPKDPDKEAGVAVGT-MMADTMSAKDKQARRNFYANFTERALARCGDTSGEKNIIEQDDVDRVEHEHILAWRAWVDLRHRVPKASARLFCCPWAGGNSLVFERWSEELPGVEVVPLLLPGRLTRARENAVTNLSDIVTTVVEAICGLHLLTHEDIPYFIYGHDFGALVAFEICRRVQDEFPMKALIVSSMSCPQM 687
            ME DRD  SCNGS+PGW GEE+Q+ DGW TN AGDSPKDP+KEA  AVGT MMADTMSAK+KQARRNFYANFTERALA+CGD SGEKNIIEQD VDRVEHEHILAWRAWVDLRHRVPKASARLFCCPWAGGNSL+FERWSEELPGVEVVPLLLPGRLTRARE+A+TNLSDIVT VVEAICGLHLLTHEDIPYFIYGH+FGALVAFE CRRVQDEFP+KALIVSSMSCPQ+
Sbjct:    1 MEGDRDDGSCNGSLPGWDGEELQYIDGWATNWAGDSPKDPEKEAAAAVGTIMMADTMSAKEKQARRNFYANFTERALAKCGDYSGEKNIIEQDGVDRVEHEHILAWRAWVDLRHRVPKASARLFCCPWAGGNSLMFERWSEELPGVEVVPLLLPGRLTRAREDAMTNLSDIVTMVVEAICGLHLLTHEDIPYFIYGHEFGALVAFETCRRVQDEFPVKALIVSSMSCPQV 230          
BLAST of mRNA_E_fasciculatus_S2_contig764.15805.1 vs.
Match: Thioesterase (n=4 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001685798F)

HSP 1 Score: 140 bits (353), Expect = 1.060e-35
Identity = 91/247 (36.84%), Postives = 127/247 (51.42%), Query Frame = 1
Query:  310 AWRAWVDLRHRVPKASARLFCCPWAGGNSLVFERWSEELPG-VEVVPLLLPGRLTRARENAVTNLSDIVTTVVEAICGLHLLTHEDIPYFIYGHDFGALVAFEICRRVQDEFPMKAL--IVSSMSCPQMVHEREKMTSLCQVSPEGEILHAKNAEFEGAMLRRGPPLPPELRENKDLMEIFTPLWFADLSAVDTYEYKSGTLLECPIYSLGGIKDGE---QDMSKWAMESSSDLSETTMFPGGSFFL 1032
            A+ AWV      P+AS RLFC P+AG  S +F  W++ LP  +EV P+ LPGR TR  E   T L  +V T+        LL H D P+  +GH  GAL++FEI RR++ +  +  L   VS    PQ+      + +L    PE   L           LRR    P  + EN +LM++  P+  AD +A++TY Y S   L+CPI + GG +D E     +  W  ++S+  S   MFPG  FFL
Sbjct:    8 AFNAWVMCPKPNPQASLRLFCFPYAGAGSQIFRTWAQSLPASIEVCPIELPGRGTRIMETPCTQLEPLVETLASV-----LLPHLDKPFAFFGHSMGALLSFEIVRRLRKKSNLLPLHLFVSGRQAPQIPDLNPPIHAL----PESAFLEE---------LRRYNGTPQAVLENAELMQLLLPILRADFAAIETYVYASEPPLDCPITAFGGFQDPEASCDQLEAWREQTSAAFS-LQMFPGDHFFL 235          
BLAST of mRNA_E_fasciculatus_S2_contig764.15805.1 vs.
Match: Anatoxin-a (synthetase A thioesterase type II n=4 Tax=Cuspidothrix issatschenkoi TaxID=230752 RepID=A0A097PUG7_9CYAN)

HSP 1 Score: 135 bits (340), Expect = 6.620e-34
Identity = 83/242 (34.30%), Postives = 131/242 (54.13%), Query Frame = 1
Query:  322 WVDLRHRVPKASARLFCCPWAGGNSLVFERWSEELP-GVEVVPLLLPGRLTRARENAVTNLSDIVTTVVEAICGLHLLTHEDIPYFIYGHDFGALVAFEICRRVQDE-FPMKALIVSSMSCPQMVHEREKMTSLCQVSPEGEILHAKNAEFEGAMLRRGPPLPPELRENKDLMEIFTPLWFADLSAVDTYEYKSGTLLECPIYSLGGIKDGEQD---MSKWAMESSSDLSETTMFPGGSFFL 1032
            WV      P+A+ RLFC P+AGG + VF  W++ELP  VEV  + +PGR  R  E  ++NL  +   +VE       L + D P+ I+GH  GAL+ +E+ R++Q +      L VS  + P          +L ++ P   +L   +AEF   + +    +P  + ++KDLME+F P+  AD++ V+T+ +  G  L+CPI++LGG++D E     +  W  E +       MFPGG F+L
Sbjct:    9 WVKCYQSNPEANLRLFCLPYAGGGTSVFRLWAQELPLNVEVCAIDMPGRERRMGEKPISNLESLTDILVEVF-----LQYLDKPFAIFGHSMGALIVYELSRKLQQKNISPVYLFVSGRAAP----------NLPELYPPLHLL--PDAEFTEKLSKVYNAIPDTVLKDKDLMELFLPVLRADMTLVETHIHSQGEPLDCPIFALGGLEDKEASYDFLVNWR-ECTRGSFSVQMFPGGHFYL 232          
BLAST of mRNA_E_fasciculatus_S2_contig764.15805.1 vs.
Match: Putative (thioesterase involved in non-ribosomal peptide biosynthesis n=1 Tax=Cylindrospermum stagnale PCC 7417 TaxID=56107 RepID=K9X7X8_9NOST)

HSP 1 Score: 135 bits (340), Expect = 6.790e-34
Identity = 84/255 (32.94%), Postives = 136/255 (53.33%), Query Frame = 1
Query:  322 WVDLRHRVPKASARLFCCPWAGGNSLVFERWSEELPG-VEVVPLLLPGRLTRARENAVTNLSDIVTTVVEAICGLHLLTHEDIPYFIYGHDFGALVAFEICRRVQDEFPMKA-LIVSSMSCPQMVHEREKMTSLCQVSPEGEILHAKNAEFEGAMLRRGPPLPPELRENKDLMEIFTPLWFADLSAVDTYEYKSGTLLECPIYSLGGIKDGEQD---MSKWAMESSSDLSETTMFPGGSFFLLDRDNEVKIVRIL 1071
            W+      P+A+ RLFC P+AGG + +F RW +ELP  VE+  + LPGR  R  E  ++NL  +   +VE      LL H D P+ ++GH  GAL+ +E+ R++Q +      L VS    P ++          ++ P   +L   +AEF   +      +P  + ++K+LME+F P+  ADL+ V+TY +     L+CPI +LGG++D E     +  W   + S  S   MFPGG F+L   +N   +++++
Sbjct:    9 WIKCPQSNPQANLRLFCLPYAGGGTSIFRRWPQELPSNVELCAIDLPGRENRIGEKPISNLEILTEKLVEV-----LLQHLDKPFALFGHSMGALIVYELARKLQQKNVNPVYLFVSGRPAPNVL----------ELYPPLHLL--PDAEFIEKLTNIYSAIPDAVLKDKELMELFLPVLRADLTLVETYIHSQVEPLDCPIVALGGLEDNEASHDYLVTWREYTRSSFS-VEMFPGGHFYL--NENRQPLLQLI 243          
BLAST of mRNA_E_fasciculatus_S2_contig764.15805.1 vs.
Match: Thioesterase (n=2 Tax=Microcoleaceae TaxID=1892252 RepID=C4NCB6_9CYAN)

HSP 1 Score: 135 bits (339), Expect = 9.490e-34
Identity = 86/261 (32.95%), Postives = 137/261 (52.49%), Query Frame = 1
Query:  322 WVDLRHRVPKASARLFCCPWAGGNSLVFERWSEELPG-VEVVPLLLPGRLTRARENAVTNLSDIVTTVVEAICGLHLLTHEDIPYFIYGHDFGALVAFEICRRVQDEFPMKA-LIVSSMSCPQMVHEREKMTSLCQVSPEGEILHAKNAEFEGAMLRRGPPLPPELRENKDLMEIFTPLWFADLSAVDTYEYKSGTLLECPIYSLGGIKDGEQD---MSKWAMESSSDLSETTMFPGGSFFLLDRDNEVKIVRILRDLCTD 1089
            W+      P+A+ RLFC P+AGG + +F  W  ELP  VE+  + LPGR  R RE  ++NL  +   +VE       L H D P+ I+GH  GAL+A+++ R++Q        L VS    P +     ++ S   + P        NAEF   + +    +P  + ++++LME+F P+  ADL+ V+TY +     L+CPI++LGG++D E     ++ W   + S  S   MFPGG F+L   +N   +++ L +   D
Sbjct:    9 WIKCPQSNPQANLRLFCLPYAGGGTSIFRLWPRELPSNVELCAIELPGRENRLREQPISNLEILTDKLVEVF-----LQHLDKPFAIFGHSMGALIAYDLARKLQQRNVNPVYLFVSGRPAPNL----PEIYSPIHLLP--------NAEFIEKLTKVYSAIPDVVLKDEELMELFLPVLRADLTLVETYIHCQVEPLDCPIFALGGLEDKEASHHYLAPWGEYTRSSFS-VQMFPGGHFYL--NENRQLLLQFLSETLKD 249          
BLAST of mRNA_E_fasciculatus_S2_contig764.15805.1 vs.
Match: Thioesterase (n=1 Tax=Ignavibacteriaceae bacterium TaxID=2651163 RepID=A0A7Y8H511_9BACT)

HSP 1 Score: 134 bits (336), Expect = 3.100e-33
Identity = 85/245 (34.69%), Postives = 137/245 (55.92%), Query Frame = 1
Query:  322 WVDLRHRVPKASARLFCCPWAGGNSLVFERWSEELP-GVEVVPLLLPGRLTRARENAVTNLSDIVTTVVEAICGLHLLTHEDIPYFIYGHDFGALVAFEICRRVQDEFPMKA--LIVSSMSCPQMVHEREKMTSLCQVSPEG-EILHAKNAEFEGAMLRRGPPLPPELRENKDLMEIFTPLWFADLSAVDTYEYKSGTLLECPIYSLGGIKDGEQDMSK---WAMESSSDLSETTMFPGGSFFLL 1035
            WV      P AS +LFC P+AGG+S +F RW E LP  VEV P+ LPGR  R  E+ + NLS++++++  +I     L H + P+  +GH  GAL++FE+ R ++ +F ++   L VS+ S P +  ERE   +    S E  E+L + N             +P EL  N ++M+I  P+  AD +  +TY++ SG+ L C I ++GG +D + ++++   W+ E +++       PG  FFLL
Sbjct:   11 WVLYPKPKPWASRKLFCFPYAGGSSFMFRRWPEFLPEDVEVCPVELPGRGRRISEDPIDNLSELISSLAGSI-----LPHLNKPFEFFGHSMGALISFELARYLKTKFDIEVSHLYVSAQSAPHL--EREPKVTYNLPSEEFIEVLRSLNG------------MPDELLSNTEMMQIMLPILRADFAICETYQFTSGSPLNCSITAIGGAEDDKVEIAELYAWS-ELTTNKFSMIQIPGDHFFLL 235          
BLAST of mRNA_E_fasciculatus_S2_contig764.15805.1 vs.
Match: Putative (thioesterase n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2D5ZBZ3_9BACT)

HSP 1 Score: 132 bits (332), Expect = 1.100e-32
Identity = 81/245 (33.06%), Postives = 131/245 (53.47%), Query Frame = 1
Query:  322 WVDLRHRVPKASARLFCCPWAGGNSLVFERWSEELP-GVEVVPLLLPGRLTRARENAVTNLSDIVTTVVEAICGLHLLTHEDIPYFIYGHDFGALVAFEICRRVQD-EFPM-KALIVSSMSCPQMVHEREKMTSLCQVSPEGEILHAKNAEFEGAMLRRGPPLPPELRENKDLMEIFTPLWFADLSAVDTYEYKSGTLLECPIYSLGGIKDGEQD---MSKWAMESSSDLSETTMFPGGSFFLLD 1038
            W+ LR   P+A  RLFC P+AGG S ++ RW   LP  +E+ P+ LPGR  R RE  + +L ++V ++  AI G+      D+P+ ++GH  GA++ FE+ RR++D E P  +ALIVS    P + +    +  L    P+   L           +R+   +P  + ++ +L+E+  P   AD    +T E+++G  L+CPI++ GG+ D + D   +  W  E ++      MF G  FFL D
Sbjct:    9 WLSLRLPEPRARTRLFCLPFAGGGSQMYRRWRGRLPEAIEICPIQLPGREGRVRERPIEDLDELVASIAGAISGV-----LDLPFVLFGHSMGAMLGFEVARRLRDQELPTPRALIVSGRRAPHVPNPDPPIGDL----PDDGFLEE---------IRQLNGIPDGVLQSAELVELILPALRADYRMCETREHQAGAQLDCPIFAYGGLSDAKVDRPSLDAWR-EHTTGPFVIRMFQGDHFFLND 234          
BLAST of mRNA_E_fasciculatus_S2_contig764.15805.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXQ5_HETAK)

HSP 1 Score: 133 bits (335), Expect = 2.690e-32
Identity = 92/312 (29.49%), Postives = 155/312 (49.68%), Query Frame = 1
Query:  169 SAKDKQARRNFYANFTERALARCG---DTSGEKNIIE----------------QDDVDRVEHEHILAWRAWVDLRHRVPKASARLFCCPWAGGNSLVFERWSEELPGVEVVPLLLPGRLTRARENAVTNLSDIVTTVVEAICGLHLLTHEDIPYFIYGHDFGALVAFEICRRVQDEF---PMKALIVSSMSCPQMVHEREKMTSLCQVSPEGEILHAKNAEFEGAMLRRGPPLPPELRENKDLMEIFTPLWFADLSAVDTYEYKSGTLLECPIYSLGGIKDG--EQDMSKWAMESSSDLSETTMFPGGSFFL 1032
            SAK ++ RR+FY ++TE   A+ G   +TS EK  IE                Q   +R + +    W+ W   R   P A  RLFC PWAGGNS  + RW E  P  E+V + LPGR+ RARE  V  +  I+ ++  A+  L L+  +  P+ ++GH +GA++A+E+ R +   F   P++ L+  S + P  V  +E++++L   +P   + H +     G        +P  +    +L++   P+  AD  A+++Y +    +L CP+  L    D   E+++  W + +   ++    F GG FF+
Sbjct:    3 SAKIREERRHFYGDWTEEVCAKAGFWTNTSTEKVDIEYLPRHLRAERRWANIVQKCFNREKQQDFSNWKKWFICRCERPDAKLRLFCLPWAGGNSTSYARWHEAFPDYEIVSVELPGRMMRAREPLVDEIDFIIHSLSTAMQRLALIRGK--PFALFGHGYGAVLAYELGRGLHARFRRAPLRLLVAGSRAPPH-VRFQERVSAL---APPELLAHLRALGPAG--------VPEVILGRPELLDRVKPVLLADQRALESYHHDPNGILPCPVLVLDATGDDIPEEEIRDWELVTDEPVT-LREFEGGHFFI 299          
BLAST of mRNA_E_fasciculatus_S2_contig764.15805.1 vs.
Match: Putative (thioesterase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8RTA5_9BACT)

HSP 1 Score: 130 bits (328), Expect = 4.170e-32
Identity = 85/243 (34.98%), Postives = 121/243 (49.79%), Query Frame = 1
Query:  322 WVDLRHRVPKASARLFCCPWAGGNSLVFERWSEELPG-VEVVPLLLPGRLTRARENAVTNLSDIVTTVVEAICGLHLLTHEDIPYFIYGHDFGALVAFEICRRVQDEFPMKA--LIVSSMSCPQMVHEREKMTSLCQVSPEGEILHAKNAEFEGAMLRRGPPLPPELRENKDLMEIFTPLWFADLSAVDTYEYKSGTLLECPIYSLGGIKDGE---QDMSKWAMESSSDLSETTMFPGGSFFL 1032
            W+ +    P+A  RLFC P+AGG +  +  W  ELP  VEV  + LPGR +R+RE+    L  +V  +  A+     L + D PY  +GH  GAL+AFE+ RR++ E       L VS    PQ+      +  L    PE E + A         LRR    P E+  + +LME+  PL  AD +AV TYEY     L CPI + GG++D E     +  W  +++   +   M PG  F+L
Sbjct:    9 WLVINRPNPQARLRLFCFPYAGGGAATYHAWPGELPTEVEVCAVQLPGRASRSRESPYDRLKQLVEALAPAV-----LPYLDRPYAFFGHSMGALIAFELTRRLRREADTSPAHLFVSGRRAPQLPRTNPPIHDL----PEAEFVQA---------LRRLNGTPDEVLAHPELMELMLPLLRADFAAVGTYEYTPEPALACPITAYGGLQDHEVSRAQLEAWRTQTTGGFT-LRMLPGDHFYL 232          
BLAST of mRNA_E_fasciculatus_S2_contig764.15805.1 vs.
Match: thioesterase (domain-containing protein n=1 Tax=Planktothrix sp. FACHB-1355 TaxID=2692854 RepID=UPI001F54D030)

HSP 1 Score: 129 bits (325), Expect = 6.330e-32
Identity = 73/229 (31.88%), Postives = 124/229 (54.15%), Query Frame = 1
Query:  361 RLFCCPWAGGNSLVFERWSEELPG-VEVVPLLLPGRLTRARENAVTNLSDIVTTVVEAICGLHLLTHEDIPYFIYGHDFGALVAFEICRRVQDE-FPMKALIVSSMSCPQMVHEREKMTSLCQVSPEGEILHAKNAEFEGAMLRRGPPLPPELRENKDLMEIFTPLWFADLSAVDTYEYKSGTLLECPIYSLGGIKD---GEQDMSKWAMESSSDLSETTMFPGGSFFL 1032
            RLFC P+AGGNS  +  W   LP  + V P+ LPGR  R  E A T+L ++  T+ E     ++  + D+P+ ++G+  GA++ FE+CR +Q   F  + L V++   P +      +  L   + + E+L     +F G         P E+ EN++L ++  PL  AD   V+TYEY++G+ L+CPI++ GG  D    E+++ +W  ++ S+  +  +  G  FF+
Sbjct:    2 RLFCFPFAGGNSFTYRTWRHNLPNWINVCPVFLPGRANRINEPAFTDLHELTATIFE-----NIRDYVDLPFAVFGYSMGAIIGFELCRLLQGAGFNAEHLFVAASPPPPLTGRDPVIYDLPVENFKEELL-----KFNGT--------PKEILENEELFDLMLPLLRADFELVETYEYRAGSKLKCPIFAFGGSWDDEVSEEELKQWQSQTDSEF-DWAILEGNHFFI 211          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig764.15805.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Thioesterase2.870e-14688.70domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Thioesterase1.060e-3536.84n=4 Tax=unclassified Microcoleus TaxID=2642155 Rep... [more]
Anatoxin-a6.620e-3434.30synthetase A thioesterase type II n=4 Tax=Cuspidot... [more]
Putative6.790e-3432.94thioesterase involved in non-ribosomal peptide bio... [more]
Thioesterase9.490e-3432.95n=2 Tax=Microcoleaceae TaxID=1892252 RepID=C4NCB6_... [more]
Thioesterase3.100e-3334.69n=1 Tax=Ignavibacteriaceae bacterium TaxID=2651163... [more]
Putative1.100e-3233.06thioesterase n=1 Tax=Phycisphaeraceae bacterium Ta... [more]
Hypothetical2.690e-3229.49protein n=2 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Putative4.170e-3234.98thioesterase n=1 Tax=Acidobacteria bacterium TaxID... [more]
thioesterase6.330e-3231.88domain-containing protein n=1 Tax=Planktothrix sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig764contigE_fasciculatus_S2_contig764:11971..16271 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeBacteria
Stop1
Start1
Seed ortholog score138.3
Seed ortholog evalue7.5e-30
Seed eggNOG ortholog402777.KB235906_gene356
Preferred namepteH
Model size1125
KEGG rclassRC00014,RC00039
KEGG koko:K01071
KEGG ReactionR04014,R08157,R08158
KEGG Pathwayko00061,ko01100,map00061,map01100
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.thioesterase involved in non-ribosomal peptide biosynthesis
EggNOG OGs1G16V@1117,1H9TC@1150,COG3208@1,COG3208@2
Ec32 ortholog descriptionThioesterase
Ec32 orthologEc-24_000940.1
EC3.1.2.21
Cds size1125
COG Functional cat.Q
Best tax levelOscillatoriales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01004
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig764.15805.1prot_E_fasciculatus_S2_contig764.15805.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig764 11971..16271 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842425.7964222-CDS-E_fasciculatus_S2_contig764:11970..120451696842425.7964222-CDS-E_fasciculatus_S2_contig764:11970..12045Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig764 11971..12045 -
1696842425.8109665-CDS-E_fasciculatus_S2_contig764:12464..126451696842425.8109665-CDS-E_fasciculatus_S2_contig764:12464..12645Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig764 12465..12645 -
1696842425.8279696-CDS-E_fasciculatus_S2_contig764:12817..129211696842425.8279696-CDS-E_fasciculatus_S2_contig764:12817..12921Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig764 12818..12921 -
1696842425.8397036-CDS-E_fasciculatus_S2_contig764:13308..133891696842425.8397036-CDS-E_fasciculatus_S2_contig764:13308..13389Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig764 13309..13389 -
1696842425.8503635-CDS-E_fasciculatus_S2_contig764:13695..139091696842425.8503635-CDS-E_fasciculatus_S2_contig764:13695..13909Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig764 13696..13909 -
1696842425.860404-CDS-E_fasciculatus_S2_contig764:14310..145071696842425.860404-CDS-E_fasciculatus_S2_contig764:14310..14507Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig764 14311..14507 -
1696842425.8779044-CDS-E_fasciculatus_S2_contig764:15325..154041696842425.8779044-CDS-E_fasciculatus_S2_contig764:15325..15404Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig764 15326..15404 -
1696842425.894474-CDS-E_fasciculatus_S2_contig764:16077..162711696842425.894474-CDS-E_fasciculatus_S2_contig764:16077..16271Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig764 16078..16271 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig764.15805.1

>prot_E_fasciculatus_S2_contig764.15805.1 ID=prot_E_fasciculatus_S2_contig764.15805.1|Name=mRNA_E_fasciculatus_S2_contig764.15805.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=375bp
MEDDRDGDSCNGSVPGWGGEEVQFTDGWVTNGAGDSPKDPDKEAGVAVGT
MMADTMSAKDKQARRNFYANFTERALARCGDTSGEKNIIEQDDVDRVEHE
HILAWRAWVDLRHRVPKASARLFCCPWAGGNSLVFERWSEELPGVEVVPL
LLPGRLTRARENAVTNLSDIVTTVVEAICGLHLLTHEDIPYFIYGHDFGA
LVAFEICRRVQDEFPMKALIVSSMSCPQMVHEREKMTSLCQVSPEGEILH
AKNAEFEGAMLRRGPPLPPELRENKDLMEIFTPLWFADLSAVDTYEYKSG
TLLECPIYSLGGIKDGEQDMSKWAMESSSDLSETTMFPGGSFFLLDRDNE
VKIVRILRDLCTDQGKAADDPRNT*
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mRNA from alignment at E_fasciculatus_S2_contig764:11971..16271-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig764.15805.1 ID=mRNA_E_fasciculatus_S2_contig764.15805.1|Name=mRNA_E_fasciculatus_S2_contig764.15805.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4301bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig764:11971..16271- (Ectocarpus fasciculatus EfasUO2)
ATGGAAGACGACCGTGATGGCGACAGCTGTAACGGAAGCGTGCCAGGGTG GGGTGGAGAGGAGGTGCAGTTCACCGACGGTTGGGTCACAAATGGGGCTG GTGATTCGCCGAAAGATCCTGATAAAGAAGCGGGGGTTGCGGTCGGGACC ATGATGGCTGACACCATGAGCGCCAAGGACAAGCAAGCGCGGAGGTGCGG GTAGTCAAGCATGCACACAGCCGCCTTTGAGCTCCGTTAGTATAGAGCTA CATATTGAGCGGTACACTTTTAGCATTTAGTTGTGTTGGCCTATCATGCA GCATCCAGAAAAGGTATACCTTTCAGCGATTGCCTCATTTTACAGTCTCG CGTTGAGCCTGCACAGCAATACTTCACAGCAGTACAACTAACTCGATTCT ACAGAACACCACACACCAGCATTTAGGCAAGCAGGGCTACCGCGCCAATC GAGCGGCTCGGACCCGTGCGGCCCATCGCGAGCTTGCCAGGCAAGGGGAG AGCAAGGAGATCCAACAAATTCTGCGAAGGCGCGGAAGGAGGAACCGCAG CAAAGAAAGCGCATAGCTGCCGCACATGCGCTCTCGCGTTGTTGTTCCCG AGCCCAATCCACAATTTCGAAATTCTGAACGCAATCCTCATAATGAGAGG GGTCCTTTTCGGTTGGCTCATCTGATAAATAGTCGGGTCGTCCTGAACAC CGGCAGGTCACGTGAATGGTGTGAGGCAATTGTTTCCTTCGTCTATTTAC ACACACGCGTCGTTGTCACTTAGCGATAGATGGGCGCAACTATTAGAAGA TTTGCATATGTACGTACACCTATAGTCTACGTGCTGACCACCGACATTAC AAACGGTACCAGTGCAGGAATTTCTACGCTAACTTCACTGAACGAGCACT GGCGAGATGTGGAGACACCAGCGGAGAGAAGAACATCATCGAGCAGGTGG ACATTGCACATTGAACGATGCGCATAACGCCAATCCACTTTAAACATTTT GTATACCCTACACTAAGATAAAAAGACACCTGTGTCTGTTCATTTTTGTT GGTACTTTCATCAGTGTTCGAGCGCTGGCACGGAGGTGCGATCACTCTTT CATAATTAATGTTGTTACCGAGTTATTACGCACCGTGCGATAACTCGATA TCATTCGCTGGTGAATAGCCACTATAGACAAGCTGTGCTTGGGACCAATT CTAGCAGCTTGGCTGTCGACGTACTGCTGTAGCAGCTTCGTTACCTGATC ATGTGACATGCAGCTACTGTAGCTCGTGGTGAAAGGCGGAGTACACTACG AGATTGGTCTTGACAATGTGCAAAAGTTCAACGCCGCGGGTGCCTTCCAG CGTCTACTTGGTGATGAGTCCCTTCATTCCTCCGTTTTCATCATGCGCAG CGAGCACGTCGTATGTACCACTCGGCACATCTCCTGCATCGGTAGGTCGT CGGGTGCCGTACGTGCGCTCTTTCTGTATGCCTGGTTGAGAGGGTACCGT TTGCCCACTCCATGAACGTAACTTTCATTGCTAGGCACGCACCAGCACCA CGCATGCATTGGCCAAGAGAACCCCGGCCCCAAATCCCAACCTATTAATA GTGGTGTCCACAAAGGGTGGAAAATGGCGTTAGCAATGTCACGCACAAGA CCATGCAGTCGAACGCGCTTGGCAGGCCAAAATGAGGTTCTGCTGGTGCA CATTATGTAGTCTAAATCGCATCACAATTAACGTCTTAGATTTTTTTTGC ATGCGAACTCCCAGGATGATGTGGACCGGGTCGAGCACGAGCACATTCTC GCGTGGCGTGCGTGGGTTGACCTGCGACACCGAGTGCCCAAGGCATCAGC GCGTTTGTTCTGTTGTCCGTGGGCTGGAGGCAACAGCCTCGTGTTTGAAC GCTGGTCAGAAGAACTGCCTGGAGTGGAAGTTGTGCCCCTCCTACTGCCG GGAAGACTCACGTAAGTTCTCGGTCTTACTAACTAGTCTTGGCGGCCAGT GATGGGCCCACGTTTCCATGGAAGCGCTCCTATCGCGAAATACAGGAGTT CAGGAATGCAAAAGTCATGGTGAACTGATTGATTCCGAAATGTGGGAAAC GAGTTCTTGCAGTCTGTGTTTTTGGGACCGCAGCATCAGACCAAATCAGC CCAGCCAACGACACCACTCTAGTCCTCTCAGAAGGAAGAAGCTGTAGCTC GACACCAGAGACTTAAACAGAACGTGCGGCGGGGCTGGCCCAAGGAATCC TAAAGCGGTTGCATACATTGTACAACGACATCCGACCGACGTTCGTAAAA CTTACGGGGGCTCAGTGATATAATTTGATTGTTGCCGTTTCTGCTGATGT CGTTCCACCAAGACGTGCGAGAGAGAATGCCGTGACAAACTTGTCGGATA TCGTGACGACGGTGGTTGAGGCGATCTGTGGGCTTCATCTTCTAACACAC GAGGACATCCCGTATTTCATATATGGGCACGACTTCGGAGCACTTGTGGC GTTCGAGATATGTCGGAGGGTGCAAGACGAGTTCCCCATGAAAGCCCTCA TCGTATCAAGCATGAGCTGCCCTCAGGTGGGTGACTTCTTTTTGACACAA TCCCTTCTTGGACATTTTGCCGCAACGGTAAAATACAGAGTGACGCGTAC GCATTTTATTGAAAAATCCTGTCGAAGTAGGTAGTAACGAGGTGGATAGG ACTCTGTGTGGGGCTACAAAAGGACACAAGAAAATCAAAGCGTTGGTCAG CTTTTTCAAGTTCCATAAGGCTATAGGCTAGGCTACGCTCGAAAGCGTGG TGAAATGTTCTCTTGGCGCGAAAACAATCGCATCAGAGTGCTTCCGACAC CCTCTCCCATTTCCTCCCAAATGGCAGTGCAGATGGTGCACGAACGAGAG AAAATGACGTCACTGTGCCAAGTTTCTCCGGAGGGCGAGATTCTGCACGC AAAAAATGCCGAGGTGAGTCCGTCCACAACGATATTCAAGCCGGCGTTAC TGCAGCGCCATTGGGGGTGCAACGTACGAGATGATGCTTGCCCAACGCCA ATGTTTGTACTACATCTCGTTGGAATAGTTGCTGAGAACTAGGCACGTGT CATGTTAATAAACTTGACGTTTTCCACTTGAAGCTCTGTGTGCCTCTATT CTTATCGACAACCCGAACAAGAGCTTGACCTCGAAACTTGACTTGGCACA GGCAGTCCCACATCTCAAGAGATACACACCTCGTTATGATACCAGTATCA TACCCTTAACTTTTTCACTGTAATACGACCTTCACAGCGTTGTGGCAAGC GGGTAAACGCTTTCCGATGTACCTGATGCACGTTTTGTTGGATCGGACAG TTTGAGGGGGCGATGCTTCGAAGAGGACCGCCGTTGCCGCCGGAGCTGCG CGAGAACAAAGACCTGATGGAGATATTCACGCCTCTGTGGTTCGCAGACT TGAGGTGAGCGACGCGCACGCAACGAGGTATTGTTATCTTTGTCCCAGCT GTTTTTGGTTTCTCGTGCATGCAACGACCCAGGTCTTTCGTGATCCCCTG CAATGCGTCGGAACATGGGTCTCACGTCAGAATCTTCCCCAAACCCCAAA CAACGCTCTCTTTCGACTCCACTTAGCGCTGTGGACACGTATGAATACAA GAGCGGCACGTTGCTTGAGTGCCCCATATACAGCCTGGGAGGTATCAAGG ACGGGGAGCAGGACATGAGTAAATGGGCCATGGAATCTTCCTCGGACTTG AGCGAGACCACCATGTTTCCAGGGGGCTCTTTCTTCTTGCTGGATCGGGA CAACGAGGTAGGCGCACTTGAAACTGGGCTAGTGATTTATTTCCGTGGTA CTGTATGTGGTAAGATGGTGGTCCTGGTTTGAGGTGCGGTGTTGGCAGGG TCCTCCGTCGGGAACAATTTACCCAAATCGCCGGTCACTTAACAAGTCCT GTACTTGTGTGTACGTCGAGCAGCACTTCACAGACGCGGGTACGATGAAA ACTGTTCCGAGCAAAATGATTCGGACGATATAAAGGCACAACTCCGTTTC AGCGAAGCCCGGACATGGGCAATATGGTGTTTGCAAGTGGCGAAACGGTC TTGACCCGACCGGTTGCTTCGGCAGCTATCCGCCCACGCAACCTACTCCA ACTCGGCACTCGACGGCAACTGTTGTATCCTAAAACCTGGCTCTTTACGT TACGTTTCGGTCGTACATTCTTGCAGGTAAAAATTGTACGGATCCTTAGA GATCTCTGCACAGATCAAGGCAAGGCGGCCGACGACCCGAGAAACACGTG A
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig764:11971..16271-

>mRNA_E_fasciculatus_S2_contig764.15805.1 ID=mRNA_E_fasciculatus_S2_contig764.15805.1|Name=mRNA_E_fasciculatus_S2_contig764.15805.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1125bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig764:11971..16271- (Ectocarpus fasciculatus EfasUO2)
ATGGAAGACGACCGTGATGGCGACAGCTGTAACGGAAGCGTGCCAGGGTG
GGGTGGAGAGGAGGTGCAGTTCACCGACGGTTGGGTCACAAATGGGGCTG
GTGATTCGCCGAAAGATCCTGATAAAGAAGCGGGGGTTGCGGTCGGGACC
ATGATGGCTGACACCATGAGCGCCAAGGACAAGCAAGCGCGGAGGAATTT
CTACGCTAACTTCACTGAACGAGCACTGGCGAGATGTGGAGACACCAGCG
GAGAGAAGAACATCATCGAGCAGGATGATGTGGACCGGGTCGAGCACGAG
CACATTCTCGCGTGGCGTGCGTGGGTTGACCTGCGACACCGAGTGCCCAA
GGCATCAGCGCGTTTGTTCTGTTGTCCGTGGGCTGGAGGCAACAGCCTCG
TGTTTGAACGCTGGTCAGAAGAACTGCCTGGAGTGGAAGTTGTGCCCCTC
CTACTGCCGGGAAGACTCACACGTGCGAGAGAGAATGCCGTGACAAACTT
GTCGGATATCGTGACGACGGTGGTTGAGGCGATCTGTGGGCTTCATCTTC
TAACACACGAGGACATCCCGTATTTCATATATGGGCACGACTTCGGAGCA
CTTGTGGCGTTCGAGATATGTCGGAGGGTGCAAGACGAGTTCCCCATGAA
AGCCCTCATCGTATCAAGCATGAGCTGCCCTCAGATGGTGCACGAACGAG
AGAAAATGACGTCACTGTGCCAAGTTTCTCCGGAGGGCGAGATTCTGCAC
GCAAAAAATGCCGAGTTTGAGGGGGCGATGCTTCGAAGAGGACCGCCGTT
GCCGCCGGAGCTGCGCGAGAACAAAGACCTGATGGAGATATTCACGCCTC
TGTGGTTCGCAGACTTGAGCGCTGTGGACACGTATGAATACAAGAGCGGC
ACGTTGCTTGAGTGCCCCATATACAGCCTGGGAGGTATCAAGGACGGGGA
GCAGGACATGAGTAAATGGGCCATGGAATCTTCCTCGGACTTGAGCGAGA
CCACCATGTTTCCAGGGGGCTCTTTCTTCTTGCTGGATCGGGACAACGAG
GTAAAAATTGTACGGATCCTTAGAGATCTCTGCACAGATCAAGGCAAGGC
GGCCGACGACCCGAGAAACACGTGA
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