mRNA_E_fasciculatus_S2_contig7595.15759.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7595.15759.1 vs.
Match: Ubiquinol (cytochrome c reductase subunit QCR7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK78_ECTSI) HSP 1 Score: 213 bits (542), Expect = 6.140e-67 Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 1
Query: 28 MARLLKKAGDFVLDVAATQYKRSMTRKLNAFGLKFDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLNQR 366
MAR+LKKAGDFVLDVAATQYKRSMTRKLNAFGLKFDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLNQR
Sbjct: 1 MARVLKKAGDFVLDVAATQYKRSMTRKLNAFGLKFDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLNQR 113
BLAST of mRNA_E_fasciculatus_S2_contig7595.15759.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYD9_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 9.450e-19 Identity = 49/103 (47.57%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 52 GDFVLDVAATQYKRSMTRKLNAFGLKFDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLN 360
G V + A Y+ + ++LN +GLK+DD++ E DPDV A+ R+ + Q+AR RR RA DIS KK PLP Q P EPY++ I+ E+R RLERELLN
Sbjct: 7 GKNVWNSVAKVYQAGVVQRLNQYGLKYDDILNESDPDVKIALSRMPGDLQVARDRRLKRALDISFKKKPLPADFQKTLTPLEPYMESIVDEMRSLRLERELLN 109
BLAST of mRNA_E_fasciculatus_S2_contig7595.15759.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GXC5_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.370e-17 Identity = 50/107 (46.73%), Postives = 68/107 (63.55%), Query Frame = 1
Query: 40 LKKAGDFVLDVAATQYKRSMTRKLNAFGLKFDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLN 360
L+ G +V A Y+ + ++LN +GLK++D++ E PDV +AV RL P+ Q +R RR RA DIS KK PLP IQ P +PY+ ++ E RE RLERELLN
Sbjct: 3 LEMVGKRAWNVLAGGYQTMVIQRLNQYGLKYNDILNEALPDVQKAVSRLDPDMQQSRDRRIKRALDISFKKKPLPMDIQKKLFPLDPYIDSLLDEARELRLERELLN 109
BLAST of mRNA_E_fasciculatus_S2_contig7595.15759.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9P6_AURAN) HSP 1 Score: 82.0 bits (201), Expect = 2.870e-16 Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = 1
Query: 100 TRKLNAFGLKFDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLN 360
+R LN +GLK+DD+ IE+D D A+A+ R++ E+ AR RR RAFDIS KK LP +Q +Q P PY +I E + R+ERELLN
Sbjct: 1 SRSLNQYGLKYDDVKIEQDADYAKALGRISDEEVQARARRMKRAFDISFKKKSLPADLQRLQAPLAPYATPLIDEAKARRVERELLN 87
BLAST of mRNA_E_fasciculatus_S2_contig7595.15759.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2G2_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 2.380e-14 Identity = 43/100 (43.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query: 61 VLDVAATQYKRSMTRKLNAFGLKFDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLN 360
+++ A Y S+TR L +GL++DD++ E P V EA+ RLTPE+++ R RR RA D+S KK +P+ +Q DPF+ YL D ++ +E+ ERE+LN
Sbjct: 44 IMNAVAKAYSESVTRSLQRYGLRYDDVVNEALPSVQEALTRLTPEEKVGRDRRLKRALDLSFKKKTMPEEMQNY-DPFQKYLYDHKEKALKEQDEREILN 142
BLAST of mRNA_E_fasciculatus_S2_contig7595.15759.1 vs.
Match: Uncharacterized (protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXZ7_PORUM) HSP 1 Score: 75.9 bits (185), Expect = 1.270e-13 Identity = 38/93 (40.86%), Postives = 62/93 (66.67%), Query Frame = 1
Query: 73 AATQYKRSMTRKLNAFGLKFDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERE 351
AA Y+ ++ +L +GL++DDL+ E DP+V + +R + PE+ R +R RA D+ LKKT LPD IQA QD + PY++ + +++ +LER+
Sbjct: 25 AAASYQAAVGNELRKYGLRYDDLLNEYDPEVRKTIRTMPPEEAELRAKRLTRAIDVDLKKTQLPDPIQAKQDIWNPYIRSRLGALKQSQLERQ 117
BLAST of mRNA_E_fasciculatus_S2_contig7595.15759.1 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TS46_9EUKA) HSP 1 Score: 74.7 bits (182), Expect = 3.760e-13 Identity = 38/93 (40.86%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 79 TQYKRSMTRKLNAFGLKFDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELL 357
T Y+ + + L+ +GL++DDL+IE DPDV A+ RL+P ++ R R RA D +K + +P+H+Q Q P YL I++ R+ERLE+++L
Sbjct: 32 TSYRNQLIKDLDKYGLRYDDLLIETDPDVITAISRLSPRERTLRTMRLKRALDCEIKHSYVPEHLQGKQGPHR-YLTPYIEQARKERLEKDIL 123
BLAST of mRNA_E_fasciculatus_S2_contig7595.15759.1 vs.
Match: Hypothetical (protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LNZ1_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 3.850e-13 Identity = 40/101 (39.60%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 61 VLDVAATQYKRSMTRKLNAFGLKFDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLNQ 363
++ A +Y++ + + L +GL+++D++I E+PDV A++ + PE+ AR RR RA D+S K LP HIQA+Q P + YL + ++E+R+ R ERE L +
Sbjct: 6 IIGTVAKKYQKWVHKDLAKYGLRYEDVIIYENPDVQRALKYIPPEEVEARNRRIRRALDLSFKHKELPKHIQAIQAPGKFYLDETMEEMRKLRKEREELTK 106
BLAST of mRNA_E_fasciculatus_S2_contig7595.15759.1 vs.
Match: Cytochrome (b-c1 complex subunit 7 n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LHI6_9CHLO) HSP 1 Score: 73.2 bits (178), Expect = 1.430e-12 Identity = 48/108 (44.44%), Postives = 67/108 (62.04%), Query Frame = 1
Query: 37 LLKKAGDFVLDVAATQYKRSMTRKLNAFGLKFDDLMIEE-DPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELL 357
+L K D ++ V A +Y+ ++ L +GL+++DLM E D +V EA+RRL + AR +R RA D+S+K LP +QAVQ PFE YLQ + VR ER ERE L
Sbjct: 6 MLAKLFDPLVAVIAPRYQAAVGSSLRKYGLRYEDLMDHEHDLNVNEALRRLPQDVVDARNQRIKRALDLSMKHAELPKELQAVQTPFESYLQATLDVVRAERAEREAL 113
BLAST of mRNA_E_fasciculatus_S2_contig7595.15759.1 vs.
Match: Cytochrome (b-c1 complex subunit 7-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0E6_9FLOR) HSP 1 Score: 72.0 bits (175), Expect = 3.040e-12 Identity = 37/100 (37.00%), Postives = 68/100 (68.00%), Query Frame = 1
Query: 61 VLDVAATQYKRSMTRKLNAFGLKFDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLN 360
+L AA Y+ ++ +L +GL++DDL+ E D +V A+ +L+P++ R +R RA D+ +KKT LP+ IQA +D + PYL+ I +++++LER++++
Sbjct: 16 LLSRAARSYQAAVGAELRRYGLRYDDLLNEYDDEVKHAISKLSPQELELRNKRLKRAIDLDVKKTYLPEDIQAQEDIWNPYLRTRIAALKQKKLERQIVD 115 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7595.15759.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7595.15759.1 >prot_E_fasciculatus_S2_contig7595.15759.1 ID=prot_E_fasciculatus_S2_contig7595.15759.1|Name=mRNA_E_fasciculatus_S2_contig7595.15759.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=114bp MARLLKKAGDFVLDVAATQYKRSMTRKLNAFGLKFDDLMIEEDPDVAEAVback to top mRNA from alignment at E_fasciculatus_S2_contig7595:3815..7343+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7595.15759.1 ID=mRNA_E_fasciculatus_S2_contig7595.15759.1|Name=mRNA_E_fasciculatus_S2_contig7595.15759.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3529bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7595:3815..7343+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7595:3815..7343+ >mRNA_E_fasciculatus_S2_contig7595.15759.1 ID=mRNA_E_fasciculatus_S2_contig7595.15759.1|Name=mRNA_E_fasciculatus_S2_contig7595.15759.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=342bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7595:3815..7343+ (Ectocarpus fasciculatus EfasUO2)back to top |