mRNA_E_fasciculatus_S2_contig7576.15738.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7576.15738.1
Unique NamemRNA_E_fasciculatus_S2_contig7576.15738.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7576.15738.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI)

HSP 1 Score: 432 bits (1112), Expect = 4.870e-140
Identity = 211/249 (84.74%), Postives = 223/249 (89.56%), Query Frame = 1
Query:    1 RKWEGGLVEYGNYVFLDVQWFATVLDPLFSHRRDRHGDIDLGGIRLPNDARARLDRLDRDHILEPKLAEELWSPELAPHLLLALKSAGLTFPFPNDRNGGLVILLRMDTTPPPEYGLKLEQVHKASEPDLRLTVKCSFSLGLPPGFVERLLARCCHLGYPHPFWRYGALIVGGGDGKRRLFSLSIEYSEEGNILTLEVFGGSAEVHAWAALSTVLSVTIKMLSEFPGLPCELMFFCPQHKTKGMPIRTT 747
            RKWEGGLVEYGNYVFLDV+WFATVLDPLFSHRRD +GDIDLGGIR+ N A  R  RLD +H+ EP+LAEELW+PELAPHLLLALKSAGLTFP PND NGGLVILLRMDTT PPEYG+KLEQVHKASE DLRLTV CSFSLGLPPGFVERLLARCCH+GYP PFWRYGALIVG G  ++ LFSLS+EYSEE  IL LEVFGG  EVHAWAALS VLSV IKMLSEFPGLPCELMFFCPQHKTKGMPIRTT
Sbjct:  822 RKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNLASLR--RLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYGIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHMGYPFPFWRYGALIVGNG-AEKGLFSLSVEYSEEDKILALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQHKTKGMPIRTT 1067          
BLAST of mRNA_E_fasciculatus_S2_contig7576.15738.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNW8_9PHAE)

HSP 1 Score: 390 bits (1002), Expect = 6.170e-132
Identity = 189/249 (75.90%), Postives = 211/249 (84.74%), Query Frame = 1
Query:    1 RKWEGGLVEYGNYVFLDVQWFATVLDPLFSHRRDRHGDIDLGGIRLPNDARARLDRLDRDHILEPKLAEELWSPELAPHLLLALKSAGLTFPFPNDRNGGLVILLRMDTTPPPEYGLKLEQVHKASEPDLRLTVKCSFSLGLPPGFVERLLARCCHLGYPHPFWRYGALIVGGGDGKRRLFSLSIEYSEEGNILTLEVFGGSAEVHAWAALSTVLSVTIKMLSEFPGLPCELMFFCPQHKTKGMPIRTT 747
            RKWEGGLVEYGNYVFLDV+WFATVLDPLFSHRRD +GDIDLGGIR+ N A  R  RLD +H+ EP+LAEELWS ELAPHLLLALKSAGLTFP PND NGGLVILLRMDT  PPEY ++ E+ ++A + DL LTV C FSLG+PPGFVERLLARCC LG P+PFWRYGAL+VG G  +  LFSLS++YSE  N+L +EV GG  EVHAWAALS VLSV IKMLSEFPGLPCE +FFCPQHKTKGMP+RTT
Sbjct:   62 RKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNIASLR--RLDNEHVFEPQLAEELWSRELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKSPPEYSIRREEANQARKYDLTLTVACWFSLGVPPGFVERLLARCCRLGVPYPFWRYGALVVGNG-AEEGLFSLSLDYSEHDNMLKVEVLGGGGEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPVRTT 307          
BLAST of mRNA_E_fasciculatus_S2_contig7576.15738.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 404 bits (1037), Expect = 8.710e-130
Identity = 195/249 (78.31%), Postives = 217/249 (87.15%), Query Frame = 1
Query:    1 RKWEGGLVEYGNYVFLDVQWFATVLDPLFSHRRDRHGDIDLGGIRLPNDARARLDRLDRDHILEPKLAEELWSPELAPHLLLALKSAGLTFPFPNDRNGGLVILLRMDTTPPPEYGLKLEQVHKASEPDLRLTVKCSFSLGLPPGFVERLLARCCHLGYPHPFWRYGALIVGGGDGKRRLFSLSIEYSEEGNILTLEVFGGSAEVHAWAALSTVLSVTIKMLSEFPGLPCELMFFCPQHKTKGMPIRTT 747
            RKWEGGLVEYGNYVFLDV+WFATVLDPLFSHRRD +GDIDLGGIR+ N A  R  RLD +H+ EP+LAEELW+PELAPHLLLALKSAGLTFP PND NGGLVILLRMDTT PPEY ++ E+ ++A + DL L+V CSFSLGLPPGFVERLLARCCHLGYP+PFWRYGALIVG G  ++ LFSLS++YSE  N+L +EV GG  EVHAWAALS VLSV IKMLSEFPGLPCE +FFCPQHKTKGMPIRTT
Sbjct:  729 RKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNLASLR--RLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYSIRREEANQARKYDLTLSVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNG-AEKGLFSLSLDYSEHDNMLKVEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPIRTT 974          
BLAST of mRNA_E_fasciculatus_S2_contig7576.15738.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 376 bits (965), Expect = 7.570e-120
Identity = 185/249 (74.30%), Postives = 209/249 (83.94%), Query Frame = 1
Query:    1 RKWEGGLVEYGNYVFLDVQWFATVLDPLFSHRRDRHGDIDLGGIRLPN-DARARLDRLDRDHILEPKLAEELWSPELAPHLLLALKSAGLTFPFPNDRNGGLVILLRMDTTPPPEYGLKLEQVHKASEPDLRLTVKCSFSLGLPPGFVERLLARCCHLGYPHPFWRYGALIVGGGDGKRRLFSLSIEYSEEGNILTLEVFGGSAEVHAWAALSTVLSVTIKMLSEFPGLPCELMFFCPQHKTKGMPIRT 744
            RKWEGGLVEYG+YVFLDV+WFATVLDPLF H+RD +G IDLGGIR+ + D+   LDRLD +H+LEP+LAE+LW P LAPHLLLALKSAGLTFP  ND NGGLVILLRMDT PPP+YG+KL++  +A++ DLRL V+CSF LGLPPGFVERLLARCCHLG P+PFWRYGALIVG G  + R+FSLS+EYSE   ILT+EV GG  EV AWAALS VLSVTIKML EFPGLPC   FFCP HKT GM IRT
Sbjct:  658 RKWEGGLVEYGSYVFLDVEWFATVLDPLFCHKRDSYGKIDLGGIRVMDVDS---LDRLDEEHVLEPQLAEDLWGPVLAPHLLLALKSAGLTFPLSNDSNGGLVILLRMDTKPPPDYGIKLKEKDQANKFDLRLVVECSFRLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKG-AEERMFSLSLEYSEARKILTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCPLHKTNGMKIRT 902          
BLAST of mRNA_E_fasciculatus_S2_contig7576.15738.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 1.370e-106
Identity = 166/248 (66.94%), Postives = 192/248 (77.42%), Query Frame = 1
Query:    1 RKWEGGLVEYGNYVFLDVQWFATVLDPLFSHRRDRHGDIDLGGIRLPNDARARLDRLDRDHILEPKLAEELWSPELAPHLLLALKSAGLTFPFPNDRNGGLVILLRMDTTPPPEYGLKLEQVHKASEPDLRLTVKCSFSLGLPPGFVERLLARCCHLGYPHPFWRYGALIVGGG--DGKRRLFSLSIEYSEEGNILTLEVFGGSAEVHAWAALSTVLSVTIKMLSEFPGLPCELMFFCPQHKTKGMPI 738
            RKWEGGLVEYGNY+FLDV WFA VLDPLFSH++D +G I LGG  + ND    L RLD +HI EP+LAE+LW  ELAPHLL AL SAGLTFP PND   GLV++LRMDT PPP+Y   +E+       DLRL V+CSF LGLPPGFVERLLARCCHLG+PHPFWRYGAL+VG G  +GK   FSL++EYSEE   L ++V G  +EVHAWA LS VLSVTIKMLSEFPGLPC+L F CP+H+ K M +
Sbjct:  337 RKWEGGLVEYGNYIFLDVGWFADVLDPLFSHKKDSNGIIYLGGKTVTNDDS--LKRLDANHIFEPRLAEDLWGAELAPHLLSALNSAGLTFPIPNDPFEGLVVVLRMDTEPPPDYRTIVEEEQARKYYDLRLVVQCSFRLGLPPGFVERLLARCCHLGFPHPFWRYGALVVGAGAEEGK---FSLTLEYSEEDKTLKVQVNGRCSEVHAWATLSKVLSVTIKMLSEFPGLPCQLEFLCPRHEDKSMRV 579          
BLAST of mRNA_E_fasciculatus_S2_contig7576.15738.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC0_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 1.570e-104
Identity = 170/250 (68.00%), Postives = 192/250 (76.80%), Query Frame = 1
Query:    1 RKWEGGLVEYGNYVFLDVQWFATVLDPLFSHRRDRHGDIDLGGIRLPN-DARARLDRLDRDHILEPKLAEELWSPELAPHLLLALKSAGLTFP-FPNDRNGGLVILLRMDTTPPPEYGLKLEQVHKASEPDLRLTVKCSFSLGLPPGFVERLLARCCHLGYPHPFWRYGALIVGGGDGKRRLFSLSIEYSEEGNILTLEVFGGSAEVHAWAALSTVLSVTIKMLSEFPGLPCELMFFCPQHKTKGMPIRT 744
            RKWEGGLVEY +YVFLDV+WFATVLDPLF H+RD +G I LGG+R+ + D    LDRLD DH+LEP+LAEE W                  FP  PND NGGLVILLRMDT P P+YG+KL++  +A++ DLRL V+CSFSLGLPPGFVERLLARCCHLG P+PFWRYGALIVG G  + R+FSLS+EYSEE  ILT+EV GG  EV AWAALS VLSVTIKMLSEFPGLPC   FFCP HKTK M IRT
Sbjct:  368 RKWEGGLVEYSSYVFLDVEWFATVLDPLFCHKRDSYGKIYLGGMRVTDVDG---LDRLDEDHVLEPQLAEEDWR-----------------FPSLPNDSNGGLVILLRMDTKPSPDYGIKLKEADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKG-AEVRMFSLSLEYSEERKILTVEVSGGRTEVFAWAALSKVLSVTIKMLSEFPGLPCGTTFFCPLHKTKRMKIRT 596          
BLAST of mRNA_E_fasciculatus_S2_contig7576.15738.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KED3_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 2.160e-104
Identity = 158/247 (63.97%), Postives = 182/247 (73.68%), Query Frame = 1
Query:    1 RKWEGGLVEYGNYVFLDVQWFATVLDPLFSHRRDRHGDIDLGGIRLPNDARARLDRLDRDHILEPKLAEELWSPELAPHLLLALKSAGLTFPFPNDRNGGLVILLRMDTTPPPEYGLKLEQVHKASEPDLRLTVKCSFSLGLPPGFVERLLARCCHLGYPHPFWRYGALIVG-GGDGKRRLFSLSIEYSEEGNILTLEVFGGSAEVHAWAALSTVLSVTIKMLSEFPGLPCELMFFCPQHKTKGMPI 738
             KWEGGLVEYG+YVFLDVQWFA VLDPLFSH+R+ +G IDLGG  +  + R+ L RLD DHI EP+LAEELW P+LA HLL ALKSAGLTFP PND N GLVIL+RM   PPP Y  KL+Q   A + DL+L   C F LGLPPG +ER+LARCC LG+P+PFWRYGALI G GG G    FS  + YS+E  +L + V GG  +V AWA LS VLSV IKMLSE+ GLPCE   FCP H+ K MPI
Sbjct:    5 EKWEGGLVEYGSYVFLDVQWFAEVLDPLFSHKRNLYGSIDLGGRSVTKNVRS-LRRLDNDHIFEPRLAEELWGPDLARHLLAALKSAGLTFPMPNDPNEGLVILVRMKDKPPPGYDTKLKQAIAARKYDLKLIFHCKFRLGLPPGLIERILARCCQLGHPYPFWRYGALISGEGGQGS---FSADLRYSDENKLLEIVVHGGREKVDAWATLSKVLSVLIKMLSEYGGLPCEPQLFCPLHEEKSMPI 247          
BLAST of mRNA_E_fasciculatus_S2_contig7576.15738.1 vs.
Match: G (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZA7_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 1.160e-90
Identity = 148/196 (75.51%), Postives = 157/196 (80.10%), Query Frame = 1
Query:   82 LFSHRRDRHGDIDLGGIRLPNDARARLDRLDRDHILEPKLAEELWSPELAPHLLLALKSAGLTFPFPNDRNGGLVILLRMDTTPPPEYGLKLEQVHKASEPDLRLTVKCSFSLGLPPGFVERLLARCCHLGYPHPFWRYGALIVGGGDGKRRLFSLSIEYSEEGNILTLEVFGGSAEVHAWAALSTVLSVTIKMLS 669
            L SH+RD  G IDLGGIR+PNDARARLDRLDRDH+ EPKLAE LWSPELA HLLLALKSAGLTFP P D NGGLVI LRMDTT  PEYG+KLEQVHKASEPDL+LTVKCSFSLGLP GFVER LA+CCH+GYP+PFWRYGALIV  GD                 IL LEVFGG  EVHAWAALS VLSV IKML+
Sbjct:  379 LISHKRDLDGHIDLGGIRVPNDARARLDRLDRDHVFEPKLAEGLWSPELASHLLLALKSAGLTFPLPQDSNGGLVINLRMDTTRLPEYGIKLEQVHKASEPDLKLTVKCSFSLGLPLGFVERFLAQCCHVGYPYPFWRYGALIVDDGD----------------KILALEVFGGCEEVHAWAALSKVLSVVIKMLT 558          
BLAST of mRNA_E_fasciculatus_S2_contig7576.15738.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM75_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 3.600e-58
Identity = 119/241 (49.38%), Postives = 154/241 (63.90%), Query Frame = 1
Query:    7 WEGGLVEYGNYVFLDVQWFATVLDPLFSHRRDRHGDIDLGGIRLPNDARARLDRLDRDHILEPKLAEELWSPELAPHLLLALKSAGLTFPFPNDRNGGLVILLRMDTTPPPEYGLKLEQVHKASEPDLRLTVKCSFSLGLPPGFVERLLARCCHLGYPHPFWRYGALIVGGGDGKRRLFSLSIEYSEEGNIL----TLEVFGGSAEVHAWAALSTVLSVTIKMLSEFPGLPCELMFFCPQH 717
            +EG LV YG++V +DVQW ATVL PL SH+    G+++LGGI +    R  ++RL +D ILEPKLAEELW P+   HLL AL SAGLTFP PND+ GGLV+LLR+D   P + G  L+   +AS  D ++   C+   G PPGF+ERLL+ CC LG  + FWRYG LI      + R FS+ +EY+E+ + L    +++ FG S     W ALS  LSV  KMLSEFPG+  E    CP H
Sbjct:  653 YEGSLVVYGSFVIVDVQWLATVLKPLCSHKDMSMGEVNLGGITVRPGPR--VERLVKDGILEPKLAEELW-PDTWEHLLRALSSAGLTFPRPNDKEGGLVVLLRLDKDRPDDVGDILDDF-RASH-DGQIVASCTLLQGAPPGFIERLLSTCCRLGSCNHFWRYGVLI------QSRSFSVILEYAEDDDTLVGKFSVDAFGDSRTAGPWLALSGCLSVLSKMLSEFPGMDVEATLECPYH 882          
BLAST of mRNA_E_fasciculatus_S2_contig7576.15738.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 8.000e-41
Identity = 97/254 (38.19%), Postives = 135/254 (53.15%), Query Frame = 1
Query:    1 RKWEGGLVEYGNYVFLDVQWFATVLDPLFSHRRDRHGD--IDLGGIRLPNDARARLD---------RLDRDHILEPKLAEELWSPELAPHLLLALKSAGLTFPFPNDRNGGLVILLRMDTTPPPEYGLKLEQVHKASEPDLRLTVKCSFSLGLPPGFVERLLARCCHLGYPHPFWRYGALIVGG-GD---GKRRLFSLSIEYSEEGNILTLEVFGGSAEVHAWAALSTVLSVTIKMLSEFPGLPCELMFFCPQH 717
            R+++G L+ Y  ++FLDV W A +L PL +H+     D  + LG      DAR  LD         RL    +LEP+LA  +W   L+ ++L AL   GLTFP  +D   GLV+LLR+    P   G  ++       P L  + K    LG+PPG +E++L RCC LG    FWRYG L+ GG G+   G+R +F++ +EYS   N L  ++FG  +    W  LS V+S    ML +FPGL       CPQH
Sbjct:  514 REFDGSLIRYEKFIFLDVVWLAKILKPLLNHKDQETFDGLVSLGDT---GDARITLDDPSDIASWGRLKSQGVLEPRLAYAIWPNGLSEYVLPALAFLGLTFPLEDDPAKGLVVLLRLKPDRPESVGHAIDTFCLDHTPALSASWK--IFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGEVHVGRRGIFAVVLEYSSTDNELAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQH 762          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7576.15738.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
LRR-GTPase4.870e-14084.74of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]
Uncharacterized6.170e-13275.90protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
LRR-GTPase8.710e-13078.31of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]
LRR-GTPase7.570e-12074.30of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]
Uncharacterized1.370e-10666.94protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.570e-10468.00protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.160e-10463.97protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
G1.160e-9075.51domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
LRR-GTPase3.600e-5849.38of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]
Uncharacterized8.000e-4138.19protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7576contigE_fasciculatus_S2_contig7576:830..1580 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score438.3
Seed ortholog evalue2.3e-120
Seed eggNOG ortholog2880.D7FX69
Model size751
KEGG koko:K04730,ko:K04733
KEGG Pathwayko04010,ko04064,ko04620,ko04621,ko04624,ko04722,ko05133,ko05140,ko05142,ko05145,ko05152,ko05162,ko05164,ko05169,map04010,map04064,map04620,map04621,map04624,map04722,map05133,map05140,map05142,map05145,map05152,map05162,map05164,map05169
KEGG ModuleM00686
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005886,GO:0005911,GO:0009506,GO:0016020,GO:0030054,GO:0042995,GO:0044464,GO:0055044,GO:0071944,GO:0090406,GO:0120025
Exons1
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGs2QQYD@2759,COG4886@1
EC2.7.11.1
Cds size750
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842418.8811784-CDS-E_fasciculatus_S2_contig7576:829..15791696842418.8811784-CDS-E_fasciculatus_S2_contig7576:829..1579Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7576 830..1579 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7576.15738.1prot_E_fasciculatus_S2_contig7576.15738.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7576 830..1579 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7576.15738.1

>prot_E_fasciculatus_S2_contig7576.15738.1 ID=prot_E_fasciculatus_S2_contig7576.15738.1|Name=mRNA_E_fasciculatus_S2_contig7576.15738.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=250bp
RKWEGGLVEYGNYVFLDVQWFATVLDPLFSHRRDRHGDIDLGGIRLPNDA
RARLDRLDRDHILEPKLAEELWSPELAPHLLLALKSAGLTFPFPNDRNGG
LVILLRMDTTPPPEYGLKLEQVHKASEPDLRLTVKCSFSLGLPPGFVERL
LARCCHLGYPHPFWRYGALIVGGGDGKRRLFSLSIEYSEEGNILTLEVFG
GSAEVHAWAALSTVLSVTIKMLSEFPGLPCELMFFCPQHKTKGMPIRTTA
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mRNA from alignment at E_fasciculatus_S2_contig7576:830..1580+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7576.15738.1 ID=mRNA_E_fasciculatus_S2_contig7576.15738.1|Name=mRNA_E_fasciculatus_S2_contig7576.15738.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=751bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7576:830..1580+ (Ectocarpus fasciculatus EfasUO2)
AGGAAGTGGGAGGGAGGACTGGTGGAATACGGCAACTACGTCTTCCTGGA CGTCCAATGGTTTGCCACAGTTCTGGATCCCTTGTTCAGTCACAGGCGAG ATCGACACGGCGACATTGATCTCGGCGGCATTCGGTTGCCGAACGATGCA CGCGCACGCTTGGACCGGCTGGACAGAGATCATATTTTAGAGCCGAAACT CGCTGAAGAGCTATGGAGTCCAGAGCTCGCACCGCATCTCCTCCTGGCTC TGAAGAGTGCAGGGCTGACGTTTCCCTTCCCGAACGACCGCAATGGGGGC TTGGTGATCCTTCTACGCATGGACACAACGCCCCCACCTGAGTATGGTCT CAAGCTCGAGCAAGTACACAAAGCTAGTGAGCCCGACCTGAGGCTCACTG TGAAATGTTCGTTCAGTCTAGGGTTGCCCCCGGGTTTTGTCGAACGTCTC CTTGCACGGTGCTGCCATTTGGGCTATCCTCACCCGTTCTGGCGATACGG GGCTCTGATAGTGGGCGGCGGTGATGGAAAACGGCGGTTGTTCTCACTGA GTATAGAGTACTCTGAGGAGGGCAACATCCTGACGTTGGAGGTGTTCGGA GGAAGTGCAGAGGTCCATGCGTGGGCGGCTCTGTCGACAGTCCTCTCCGT CACGATCAAGATGCTCTCGGAGTTCCCTGGTCTTCCATGCGAGCTGATGT TCTTCTGCCCACAGCACAAGACCAAGGGCATGCCGATCAGGACAACAGCT G
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7576:830..1580+

>mRNA_E_fasciculatus_S2_contig7576.15738.1 ID=mRNA_E_fasciculatus_S2_contig7576.15738.1|Name=mRNA_E_fasciculatus_S2_contig7576.15738.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=750bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7576:830..1580+ (Ectocarpus fasciculatus EfasUO2)
AGGAAGTGGGAGGGAGGACTGGTGGAATACGGCAACTACGTCTTCCTGGA
CGTCCAATGGTTTGCCACAGTTCTGGATCCCTTGTTCAGTCACAGGCGAG
ATCGACACGGCGACATTGATCTCGGCGGCATTCGGTTGCCGAACGATGCA
CGCGCACGCTTGGACCGGCTGGACAGAGATCATATTTTAGAGCCGAAACT
CGCTGAAGAGCTATGGAGTCCAGAGCTCGCACCGCATCTCCTCCTGGCTC
TGAAGAGTGCAGGGCTGACGTTTCCCTTCCCGAACGACCGCAATGGGGGC
TTGGTGATCCTTCTACGCATGGACACAACGCCCCCACCTGAGTATGGTCT
CAAGCTCGAGCAAGTACACAAAGCTAGTGAGCCCGACCTGAGGCTCACTG
TGAAATGTTCGTTCAGTCTAGGGTTGCCCCCGGGTTTTGTCGAACGTCTC
CTTGCACGGTGCTGCCATTTGGGCTATCCTCACCCGTTCTGGCGATACGG
GGCTCTGATAGTGGGCGGCGGTGATGGAAAACGGCGGTTGTTCTCACTGA
GTATAGAGTACTCTGAGGAGGGCAACATCCTGACGTTGGAGGTGTTCGGA
GGAAGTGCAGAGGTCCATGCGTGGGCGGCTCTGTCGACAGTCCTCTCCGT
CACGATCAAGATGCTCTCGGAGTTCCCTGGTCTTCCATGCGAGCTGATGT
TCTTCTGCCCACAGCACAAGACCAAGGGCATGCCGATCAGGACAACAGCT
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