mRNA_E_fasciculatus_S2_contig757.15732.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig757.15732.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K090_9PHAE) HSP 1 Score: 751 bits (1939), Expect = 5.830e-272 Identity = 375/406 (92.36%), Postives = 386/406 (95.07%), Query Frame = 3
Query: 24 MSNGAPPWPQSSMGPMLRRRHEAVNPALGNGAAPREGTLLARTIKQLDVYARVDEDLQVRTEAGAAVTIGFWVLMVVLCVGEVLAYRKVQAPTERVVVDSSMGQKLRINIDMTFHSIPCLDVHVDAMDVAGDNQIDIDHGMWKQRLDPDGSAIGEAFMEVPGEIDDDPAQSLPEGYCGSCFGAKEGCCNMCRDVVDAYTAKGWSVQDIRRTAEQCIRDNHIETPIVDGEGCNLSGFMSVNKVSGNFHVATGEGVMREGRHVHLYTMEQAVGFNTSHSINLLSFGEPFPGMKPNPLDSTSRIIDADVGTGAFQYYIKLVPTMHSLSPQSKTKGKSLPKGKGEEAEQQ-HSSITSQFTYTYKFRSLKGLTEYHTDHEEGEEKTKEAEKGSS---GVNSIANSALLPGV 1229
MSNGAPPWPQSSMGPMLRRRHEAVNPA GNGAAPREGTLL RTIKQLDVYARVDEDLQVRTE GAAVTIGFWVLMVVLCVGEV AYRKVQAPTERVVVDS+MGQKLRINIDMTFHSIPCLDVHVDAMDVAGDNQIDIDHGMWKQRLDPDGSAIGEAFMEVPG++DDDPAQSLPE YCGSCFGAKEGCCNMCRDVV+AYTAKGWSVQDIRRTAEQCIRDNHIETPIV GEGCNLSGFMSVNKVSGNFHVATGEGVMREGRHVHLYTMEQAVGFNTSHSINLLSFGEP+PGMKPNPLDSTSRIID DVGTGAFQYYIKLVPT+HSL+PQS+T LPKGK EEAEQQ HSS+TSQFTYTYKFRSLKGLTEYH DHEEGEE+ KEAEKGS+ GVNS ANS LLPGV
Sbjct: 1 MSNGAPPWPQSSMGPMLRRRHEAVNPASGNGAAPREGTLLERTIKQLDVYARVDEDLQVRTETGAAVTIGFWVLMVVLCVGEVQAYRKVQAPTERVVVDSTMGQKLRINIDMTFHSIPCLDVHVDAMDVAGDNQIDIDHGMWKQRLDPDGSAIGEAFMEVPGKVDDDPAQSLPEDYCGSCFGAKEGCCNMCRDVVEAYTAKGWSVQDIRRTAEQCIRDNHIETPIVIGEGCNLSGFMSVNKVSGNFHVATGEGVMREGRHVHLYTMEQAVGFNTSHSINLLSFGEPYPGMKPNPLDSTSRIIDEDVGTGAFQYYIKLVPTVHSLNPQSETSRSPLPKGKREEAEQQQHSSLTSQFTYTYKFRSLKGLTEYHADHEEGEEQAKEAEKGSTKDGGVNSFANSVLLPGV 406
BLAST of mRNA_E_fasciculatus_S2_contig757.15732.1 vs.
Match: Endoplasmic (reticulum vesicle transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGD9_9STRA) HSP 1 Score: 317 bits (811), Expect = 8.850e-101 Identity = 170/383 (44.39%), Postives = 244/383 (63.71%), Query Frame = 3
Query: 69 MLRRRHEAVNPALGNGAAPRE---GTLLARTIKQLDVYARVDEDLQVRTEAGAAVTIGFWVLMVVLCVGEVLAYRKVQAPTERVV-VDSSMGQKLRINIDMTFHSIPCLDVHVDAMDVAGDNQIDIDHGMWKQRLDPDGSAIGEAFMEVPGEIDDDPAQSLPEGYCGSCFG-------------AKEG----CCNMCRDVVDAYTAKGWSVQDIRRTAEQCIRDNHIETPIVDGEGCNLSGFMSVNKVSGNFHVATGEGVMREGRHVHLYTMEQAVGFNTSHSINLLSFGEPFPGMKPNPLDSTSRIIDADVGTGAFQYYIKLVPTMHSLSPQSKTKGKSLPKGKGEEAEQQHSSITSQFTYTYKFRSLKGLTEY--HTDHEE 1148
MLRRR A N + + LA+T++++D+YARV+EDL V+TE+GA VT+ FWVL+V+L EV + + E ++ VD+S+G+KL I ++MTFH+I CLD+HVDAMDVAGDNQ+D++H M KQRL G + A E +++ +LP YCG+C+G A G CCN C VV+++ +GWS ++R+TAEQCIR+ H+E P+ + EGCNLSG M VNKV+GNFH+A GE ++++GRHVH++ ++ + FN SH+I+ LSFG+ +P M NPLD R++ D GTG QYYI LVP ++ K +G S GE+ E +T+QFTYT KFRS+ G ++ H H++
Sbjct: 10 MLRRRASAAGKRPSNLRVDDDEDADSKLAKTLRRMDLYARVNEDLTVKTESGATVTVVFWVLLVLLVTSEVRTFLATRTSREELMRVDTSLGRKLEIGLNMTFHAINCLDLHVDAMDVAGDNQLDVEHAMLKQRLSAAGEPLAPAISEEVSQLEH--RATLPRDYCGNCYGSDSRGRAAAAAERAASGGSIRCCNTCHAVVESFALRGWSTAEVRKTAEQCIREAHLEVPMQEMEGCNLSGKMRVNKVAGNFHMAMGESMVKDGRHVHIFNIDDSDTFNISHTIHSLSFGDTYPDMPANPLDGVVRMVGEDTGTGLMQYYINLVPAVY------KAEGSS-----GEKTE----LVTTQFTYTMKFRSVYGYDDFQAHEHHDQ 375
BLAST of mRNA_E_fasciculatus_S2_contig757.15732.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7C1_9STRA) HSP 1 Score: 271 bits (692), Expect = 7.150e-84 Identity = 137/294 (46.60%), Postives = 195/294 (66.33%), Query Frame = 3
Query: 126 REGTLLARTIKQLDVYARVDEDLQVRTEAGAAVTIGFWVLMVVLCVGEVLAYRKVQAPTERVVVDSSMGQKLRINIDMTFHSIPCLDVHVDAMDVAGDNQIDIDHGMWKQRLDPDGSAIGEAFMEVPGEIDDDPAQSLPEGYCGSCFGAKEG---CCNMCRDVVDAYTAKGWSVQDIRRTAEQCIRDN--HIETPIVDGEGCNLSGFMSVNKVSGNFHVATGEGVMREGRHVHLYTMEQAVGFNTSHSINLLSFGEPFPGMKPNPLDSTSRIIDADVGTGAFQYYIKLVPTMHS 992
+ G + R+IK D+Y ++DE +V+T GA ++I W+L+ +L + EV Y + E ++VD+S+GQ+LRIN+++TFHS+ C +VH+DAMDVAGDNQ++++H M KQR+ G IG A +E+ GE + + P YCG CFGA CCN C ++ AY K WSV +I R + QCI D H D EGC +SG MSVNKV+GNFH+A GE ++R+GRH+H + A FN SH+I+ LSFG+P+P M NPLDS RII D TG FQY+I+++PT+++
Sbjct: 13 KSGGGMFRSIKNFDIYPKIDESYRVQTSGGAILSILGWILIAILALAEVRNYMTPKFK-EHMIVDTSLGQQLRINVNITFHSLTCNEVHLDAMDVAGDNQLNVEHEMVKQRMSRHGIPIGAAGVEIIGEGPIE-VEDHPPNYCGDCFGADTPEIRCCNTCDQLIQAYQLKQWSVSEILRNSTQCIHDRAKHFANIGAD-EGCTVSGKMSVNKVAGNFHIAHGESIVRDGRHIHQFNPALAPKFNVSHTIHSLSFGDPYPSMPANPLDSVKRIIAEDESTGLFQYFIRVIPTIYT 303
BLAST of mRNA_E_fasciculatus_S2_contig757.15732.1 vs.
Match: Uncharacterized (protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAM5_9STRA) HSP 1 Score: 260 bits (665), Expect = 1.970e-79 Identity = 136/315 (43.17%), Postives = 195/315 (61.90%), Query Frame = 3
Query: 72 LRRRHEAVNPALGNGA-APREGTLLARTIKQLDVYARVDEDLQVRTEAGAAVTIGFWVLMVVLCVGEVLAYRKVQAPTERVVVDSSMGQKLRINIDMTFHSIPCLDVHVDAMDVAGDNQIDIDHGMWKQRLDPDGSAIGEAFMEVPGEIDDDPAQSL----PEGYCGSCFGAKE---GCCNMCRDVVDAYTAKGWSVQDIRRTAEQCIRDNHIETP---IVDGEGCNLSGFMSVNKVSGNFHVATGEGVMREGRHVHLYTMEQAVGFNTSHSINLLSFGEPFPGMKPNPLDSTSRIIDADVGTGAFQYYIKLVPT 983
+RRR A G A P+ A+ ++++DV+ + ++ +++T GA++ + WVL++VL E E +VVD+S+G KL I +DMTFH++ C DVHVDAMDVAGDNQ+ ++H M KQRL G IG F+E P + D A +L P YCGSCF A+ CCN C+D+ AY +G + I+ TA QC+ P + GEGCNL GFMSVNKV+GNFH+A G+ V+++GRH+H + +A FN SH+I +SFG+ +PG + NPLD + + + VGTG FQY+IK++PT
Sbjct: 6 MRRRAPMNAGAWGADADKPKAPIASAKVLERMDVFTKFHDEDKIQTSRGASMALFSWVLVLVLLCSEAYEAFLTSRTKEHLVVDTSLGDKLNITLDMTFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLSSQGERIGFPFLEDPTDFDSKKADALLGAAPWDYCGSCFQARTHTGACCNSCQDLEQAYLTQGLPMGKIKTTAPQCLPGFQAPAPSGPMQKGEGCNLKGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHTIQHVSFGDEYPG-RVNPLDGKVKYVSSTVGTGLFQYFIKVIPT 319
BLAST of mRNA_E_fasciculatus_S2_contig757.15732.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HLA8_9STRA) HSP 1 Score: 228 bits (580), Expect = 7.900e-69 Identity = 119/262 (45.42%), Postives = 176/262 (67.18%), Query Frame = 3
Query: 153 IKQLDVYARVDEDLQVRTEAGAAVTIGFWVLMVVLCVGEVLAYRKVQAPT-ERVVVDSSMGQKLRINIDMTFHSIPCLDVHVDAMDVAGDNQIDIDHGMWKQRLDPDGSAIGEAFMEVPGEIDDDPAQSLPEGYCGSCFGA-KEG-CCNMCRDVVDAYTAKGWSVQDIRRTAEQCIRDNHIETPIV-DGEGCNLSGFMSVNKVSGNFHVATGEGVMREGRHVHLYTMEQAVGFNTSHSINLLSFGEPFPGMKPNPLDSTSRI 926
+++LD+Y++V+ + +V T G +++ W L ++L + E Y + + T E +VVDS +GQKLRI+++++F ++ C+++HVDAMDVAGD ++ M KQRLD +G IGE E +++ +P+ YCGSC+GA +G CCN C V+ Y KGW+ +DIRR +EQC R+ V DGEGCNL+GFM VNKV+GNFHVA GE V+R+GR +H + E A FNTSH ++ L+FGE +PG+ NPLDS ++
Sbjct: 10 VRKLDMYSKVESEFKVTTATGGYLSLIGWALTLILTLSETWGYWRSRTTTKEHMVVDSFLGQKLRIDMNISFPALSCVEMHVDAMDVAGDYHPYVEQNMVKQRLDRNGVPIGETVEEQVNVVENKD-DIMPKDYCGSCYGAGADGECCNTCEQVLSRYATKGWATKDIRRDSEQCKREQTNPLGAVEDGEGCNLAGFMLVNKVAGNFHVALGESVVRDGRFIHQFQPEDAPRFNTSHIVHHLTFGENYPGIV-NPLDSVVKM 269
BLAST of mRNA_E_fasciculatus_S2_contig757.15732.1 vs.
Match: CopII (vesicle protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4Z337_PHYSP) HSP 1 Score: 229 bits (584), Expect = 1.210e-67 Identity = 126/288 (43.75%), Postives = 188/288 (65.28%), Query Frame = 3
Query: 147 RTIKQLDVYARVDEDLQVRTEAGAAVTIGFWVLMVVLCVGEVLAYRKVQAPTERVVVDSSMGQKLRINIDMTFHSIPCLDVHVDAMDVAGDNQIDIDHGMWKQRLDPDGSAIGEAFMEVPGEIDDDPAQS-LPEGYCGSCFGAK----EGCCNMCRDVVDAYTAKGWSVQDIRRTAEQCIRD-NHIETPIVDGEGCNLSGFMSVNKVSGNFHVATGEGVMREGRHVHLYTMEQAVGFNTSHSINLLSFGEPFPGMKPNPLDSTSRIIDADVGTGAFQYYIKLVPTMHS 992
R +K++DVY ++ + +V+TE GA V+I ++M +L + E+ AY + E +VVDSS+G+KL++N+D++F ++ C D H++AMDVAG+ Q+++ + K RLD DG+ IG + E ++ A++ LPEGYCGSC GA+ + CCN C DV +A+ +S++D + EQC+R+ E DGEGC +G M VN+V+GNFHVA G R+GR VH + Q +N+SH I+ LSFGEP PG+ PLD S+I A+ G FQYYIK+VPT++S
Sbjct: 29 RVLKKVDVYPKMHREFKVQTEFGATVSIVAGIVMAILFLSELSAYWSLNTH-EHMVVDSSLGEKLQVNLDVSFLAVNCRDAHINAMDVAGELQVNMHQTVVKTRLDADGNTIGRPISMITDEGAEEQAKTALPEGYCGSCHGAQHPAGKECCNTCEDVKEAFIYSDFSLEDAEQK-EQCVREIMEAEKLAQDGEGCRFTGKMFVNRVAGNFHVALGRTFHRQGRLVHQFRPGQEHTYNSSHIIHSLSFGEPMPGVA-GPLDGVSKI--AEQSGGVFQYYIKIVPTIYS 311
BLAST of mRNA_E_fasciculatus_S2_contig757.15732.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK81_PYTOL) HSP 1 Score: 228 bits (580), Expect = 4.250e-67 Identity = 131/287 (45.64%), Postives = 185/287 (64.46%), Query Frame = 3
Query: 147 RTIKQLDVYARVDEDLQVRTEAGAAVTIGFWVLMVVLCVGEVLAYRKVQAPTERVVVDSSMGQKLRINIDMTFHSIPCLDVHVDAMDVAGDNQIDIDHGMWKQRLDPDGSAIGEAFMEVPGEIDDDPAQSLPEGYCGSCFG----AKEGCCNMCRDVVDAYTAKGWSVQDIRRTAEQCIRDNHIETPIV-DGEGCNLSGFMSVNKVSGNFHVATGEGVMREGRHVHLYTMEQAVGFNTSHSINLLSFGEPFPGMKPNPLDSTSRIIDADVGTGAFQYYIKLVPTMHS 992
R +K++DVY ++ + +V+TE GA V+I V+M+VL + E+ AY V E +VVDS++ +KL+IN+DM+F +I C D HV+AMDVAGD Q+++ + K RLDP+G IG+ V E + P LP GYCGSC+ A + CCN C +V +A+ S++D + EQCIR+ E + +GEGC G MSVN+V+GNFHVA G REGR VH + Q + FN SH I+ LSFG P+PG + PLD T +I A +G G FQY++K+VPT++S
Sbjct: 32 RALKRVDVYPKMHREFKVQTEFGATVSIVMAVVMIVLFLSELNAYLYVHTH-EHMVVDSTINEKLQINVDMSFLAINCKDAHVNAMDVAGDLQMNMHQTIKKTRLDPNGRPIGKPISMVSSE--NAPKTQLPPGYCGSCYDLPHPAGKKCCNTCDEVKEAFIHNDLSLEDADQK-EQCIREGLAEEELAQEGEGCRFQGNMSVNRVAGNFHVALGRTFHREGRLVHQFRPGQELSFNASHIIHSLSFGTPYPG-QVGPLDGTKKIA-AQIG-GVFQYFVKVVPTIYS 311
BLAST of mRNA_E_fasciculatus_S2_contig757.15732.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6HM67_9STRA) HSP 1 Score: 227 bits (579), Expect = 1.440e-66 Identity = 124/306 (40.52%), Postives = 188/306 (61.44%), Query Frame = 3
Query: 144 ARTIKQLDVYARVDEDLQVRTEAGAAVTIGFWVLMVVLCVGEVLAYRKVQAP-TERVVVDSSMGQKLRINIDMTFHSIPCLDVHVDAMDVAGDNQIDIDHGMWKQRLDPDGSAIGEAFMEVP----GEID----DDPAQSLPEGYCGSCFGA---KEGCCNMCRDVVDAYTAKGWSVQDIRRTAEQCIRDNHIETP---IVDGEGCNLSGFMSVNKVSGNFHVATGEGVMREGRHVHLYTMEQAVGFNTSHSINLLSFGEPFP----------GMKPNPLDSTSRII-DADVGTGAFQYYIKLVPT 983
++ ++ LD++ +V+ DL V+T+ G + + + ++ VL + EV++YR + E V VD S+G+++R+++++TF ++ C D+HVDAMDVAGD+QID++ + K+RL DG + ++V E D D + LPE YCG C+GA ++ CCN C DVV+AY K WS + AEQC R+ + + GEGCNLSG+M+ N+V+GNFH+A GEGV R+GRH+H + E A FN SH+I+ LSFG F G L S+I+ + + TG FQY+IK+VPT
Sbjct: 4 SKVMRSLDMFPKVESDLTVKTDRGGMMALAGYGVIAVLLLAEVVSYRSENSSFKEHVRVDKSLGKRMRVDLNITFPALHCDDLHVDAMDVAGDSQIDVEDTLVKKRLHLDGRRLSSGEIKVETNKAAEADKKSRDISMKGLPEDYCGPCYGAHQTEDQCCNTCDDVVEAYKVKKWSDHGVLGVAEQCKREGRTKLEPKRMSKGEGCNLSGYMTFNRVAGNFHIAMGEGVERDGRHIHQFVPEDAPNFNASHTIHKLSFGPEFEVFGSTGTDKRGFARADLSGVSKIVTEVNGNTGLFQYFIKVVPT 309
BLAST of mRNA_E_fasciculatus_S2_contig757.15732.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WEL7_9STRA) HSP 1 Score: 224 bits (571), Expect = 4.410e-66 Identity = 135/361 (37.40%), Postives = 208/361 (57.62%), Query Frame = 3
Query: 138 LLARTIKQLDVYARVDEDLQVRTEAGAAVTIGFWVLMVVLCVGEVLAYRKVQAPT-ERVVVDSSMGQKLRINIDMTFHSIPCLDVHVDAMDVAGDNQIDIDH-GMWKQRLDPDGSAIGEAFMEVPGEIDD----------DPAQSLPEGYCGSCFGAK---EGCCNMCRDVVDAYTAKGWSVQDIRRTAEQCIRDNHIETPIVD-GEGCNLSGFMSVNKVSGNFHVATGEGVMREGRHVHLYTMEQAVGFNTSHSINLLSFGEPFPGM----------KPNPLDSTSRII-DADVGTGAFQYYIKLVPTMHSLSPQSKTKGKSLPKGKGEEAEQQHSSITSQFTYTYKFRSLKGLTEYHTD 1139
L RT+++LD + +V+ DL V+TE G T+ ++++ +L + EVL++R A E VVVD+S+G+K+R+++++TF ++ C D+HVD MDVAGD Q ++D M K RL DG+++ + E+ E++ D +S YCG C+GA+ E CCN C +++ Y K W+ + +R+T+EQC R+ + + GEGCNLSG M+ N+V+GNFH+A GEGV R+GRHVH + + V FN SH I+ L FG F + N LD +I+ D D TG FQY++K+VPT + S +L E Q S T+++ T F+ L + + H D
Sbjct: 21 LSPRTVRRLDFFQKVESDLTVKTERGGKATLVGYLIIAILILAEVLSWRASNAELMEHVVVDTSLGKKMRVSLNITFPALHCNDLHVDLMDVAGDAQFNVDEDSMIKLRLHMDGTSLRKE--EIKAEMNTAHAAEEKFQIDLGKSQHADYCGPCYGAQGTPEECCNTCDSIIELYKKKRWNFEHVRQTSEQCKREGKTKPKRMSKGEGCNLSGSMAFNRVAGNFHIAMGEGVERDGRHVHTFQPDDTVNFNASHIIHELRFGPDFDAQLKGKNEKLKWEINTLDGVRKIVTDEDGTTGMFQYFLKIVPTTYKGSEVVNAVDPNLSANTNE----QISLETNRYFTTEVFKPLMAVEDEHRD 375
BLAST of mRNA_E_fasciculatus_S2_contig757.15732.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZET6_9STRA) HSP 1 Score: 228 bits (580), Expect = 8.760e-66 Identity = 119/302 (39.40%), Postives = 184/302 (60.93%), Query Frame = 3
Query: 156 KQLDVYARVDEDLQVRTEAGAAVTIGFWVLMVVLCVGEVLAYRKVQAPT-ERVVVDSSMGQKLRINIDMTFHSIPCLDVHVDAMDVAGDNQIDIDHGMWKQRLDPDGSAIGEAFMEVPGEIDDDP--------AQSLPEGYCGSCFGAKEG---CCNMCRDVVDAYTAKGWSVQDIRRTAEQCIRDN--HIETPIVD-GEGCNLSGFMSVNKVSGNFHVATGEGVMREGRHVHLYTMEQAVGFNTSHSINLLSFGEPFPGMKPNPLD---------STSRIIDADVGTGAFQYYIKLVPTMH 989
K LD++ +V+ D VRTE G T+ + ++ +L + E++ +R T E VVVD+S+G+++++N+++TF S+ C D+HVD MD+AGD+Q+ +D M K+RL PDGS +G ++V + A+ + + YCG C+GA E CCN C DV AY K W+ ++ + AEQCIR+ ++ P++ GEGCNLSG M VN+VSGNFH+A GEG+ ++GRH+H +T E FN SH ++ L+FG + + +T + + D TG FQY+IK+VPT +
Sbjct: 67 KNLDLFPKVERDYTVRTERGGFATLVGYGMVALLVLAEIITWRNQNQQTVEHVVVDTSLGKRMKVNVNITFPSLHCNDLHVDVMDIAGDSQLGVDDSMVKRRLHPDGSPLGTKEIKVEANKAAEEHSKREGILAEEVGDNYCGPCYGAHETEDQCCNTCDDVQKAYKKKRWNSGEVVKLAEQCIREGVTSLQLPLMSKGEGCNLSGHMEVNRVSGNFHIAMGEGIEKDGRHIHQFTPEDTPNFNASHIVHELTFGPSLDSIFKKSIGVGQIAAMNGATKIVTEKDGTTGLFQYFIKVVPTSY 368 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig757.15732.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig757.15732.1 >prot_E_fasciculatus_S2_contig757.15732.1 ID=prot_E_fasciculatus_S2_contig757.15732.1|Name=mRNA_E_fasciculatus_S2_contig757.15732.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=404bp MSNGAPPWPQSSMGPMLRRRHEAVNPALGNGAAPREGTLLARTIKQLDVYback to top mRNA from alignment at E_fasciculatus_S2_contig757:23373..27388+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig757.15732.1 ID=mRNA_E_fasciculatus_S2_contig757.15732.1|Name=mRNA_E_fasciculatus_S2_contig757.15732.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4016bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig757:23373..27388+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig757:23373..27388+ >mRNA_E_fasciculatus_S2_contig757.15732.1 ID=mRNA_E_fasciculatus_S2_contig757.15732.1|Name=mRNA_E_fasciculatus_S2_contig757.15732.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1212bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig757:23373..27388+ (Ectocarpus fasciculatus EfasUO2)back to top |