mRNA_E_fasciculatus_S2_contig7568.15728.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7568.15728.1 vs.
Match: Similar (to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQT5_ECTSI) HSP 1 Score: 691 bits (1784), Expect = 3.980e-245 Identity = 403/515 (78.25%), Postives = 418/515 (81.17%), Query Frame = 1
Query: 1 MAQNTPLPAAAPLHDAAGVGDPVAVAGMLKDGADHNAKVDRQGYSYNDGVTALHIAAREDHLPVAVALLAAGAWPDGRASDDEDCQDPTPLXXXXXXXXXXXXXXXXXXXXXXXLFASFGED-LTLTALSRAVENGHLEVVRTLAEAGADVNLLPEDNWDEIPPLVAAAXXXXXXXXXXXXXXXXXXXGFGHDGFSALHQAKDVRXXXXXXXXXXXIEQGINSDYDSHGCDEATPIGWLCLKTHQRFSPLQRLGCELEAGEAALSSESEIERATAMVQLLLIRGAKIDSKAGCVGHCLLTGARGPPLSAAVYNGTAAICAALIDKGADLDATDWALQDFEADGDVKIRPIHDAARFGDVDILRLLLVAGAGANCLSNFRQDDHLGRWGTPLHVACRYSQLGCVRELLRWGADVWAEEKHCSGEGXXXXXXXXXXPCQCESCLPQLAGCGKTPAEVIGLRDVVTNGEIKARLSDSTTVGDSDGIRRELLWWRRCAVVLLADRLAKQRVSADAGKST 1542
MAQNTPLPAAAPLHDAAGVGD VAVA +LKDGAD NA+VDR+GYSY+DG TALHIAAREDHL VAVALLAAGAWPDGRASD EDC DPTPL +FASFG LTAL AVENGHLEVVRTLAEAGADVNL+ ED + E+PPLV XXXXXXXXXXXXXXXXXXX SALHQAKDVR IEQGI +DYDSHGCDEATPIGWL LKTHQRFSPLQ LG LE G AALSSE EI RATAMVQLLL RGAKIDSKAGCVGHCL TGARGPPLSAAVYNGT AICAALID GADLDATDW LQDF+ADGDVKIRPIHDAARFGDVDILRLLL AGAGAN LSNFR+ D L RWGTPLHVACRYSQLGCVRELLRWGADVWAEE+ SGE XXXXXXX PC+CESCL + AGCGKTPAEVIGLRDVVTN EI AR SDSTTVGD D IRRELLWWRRCAVVLLA RLAKQ VSAD G +T
Sbjct: 1 MAQNTPLPAAAPLHDAAGVGDAVAVADLLKDGADRNARVDREGYSYSDGATALHIAAREDHLSVAVALLAAGAWPDGRASD-EDCNDPTPLHEASARGGVEVTKALLKAGAGKDIFASFGTGGPCLTALDLAVENGHLEVVRTLAEAGADVNLIYEDGYAEVPPLVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALHQAKDVRVMEVLLNAGADIEQGITTDYDSHGCDEATPIGWLSLKTHQRFSPLQNLGYGLEVG-AALSSEDEIGRATAMVQLLLRRGAKIDSKAGCVGHCLRTGARGPPLSAAVYNGTTAICAALIDNGADLDATDWELQDFDADGDVKIRPIHDAARFGDVDILRLLLGAGAGANSLSNFRRGDDLERWGTPLHVACRYSQLGCVRELLRWGADVWAEERQSSGE-EXXXXXXXKAPCECESCLSKSAGCGKTPAEVIGLRDVVTNLEINARPSDSTTVGDGDEIRRELLWWRRCAVVLLAARLAKQ-VSADGGTTT 511
BLAST of mRNA_E_fasciculatus_S2_contig7568.15728.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KST3_9PHAE) HSP 1 Score: 684 bits (1765), Expect = 2.750e-241 Identity = 414/594 (69.70%), Postives = 437/594 (73.57%), Query Frame = 1
Query: 1 MAQNTPLPAAAPLHDAAGVGDPVAVAGMLKDGADHNAKVDRQGYSYNDGVTALHIAAREDHLPVAVALLAAGAWPDGRASDDEDCQDPTPLXXXXXXXXXXXXXXXXXXXXXXXLFASFGEDLT-LTALSRAVENGHLEVVRTLAEAGADVNLLPEDNWDEIPPLVAAAXXXXXXXXXXXXXXXXXXXGFGHDGFSALHQAKDVRXXXXXXXXXXXIEQGINSDYDSHGCDEATPIGWLCLKTHQRFSPLQRLGCELEAGEAALSSESEIERATAMVQLLLIRGAKIDSKAGCVGHCLLTGARGPPLSAAVYNGTAAICAALIDKGADLDATDWALQDFEADGDVKIRPIHDAARFGDVDILRLLLVAGAGANCLSNFRQDDHLGRWGTPLHVA----------------------------------CRYSQLGCVRELLRWGADVWAEEKHCSGEGXXXXXXXXXXPCQCESCLPQLAGCGKTPAEVIGLRDVVTNGEIKARLSDSTTVGDSDGIRRELLWWRRCAVVLLADRLAKQRVSADAGKSTAASSANTAQRSQVLVGDDELLAIAGRMANLGEPSQGVFRHIVTFL 1677
MAQNTPL AAAPLHDAAGVGD VAVAG+LKD A NA+VDR+GYSY+DG TALHIAAREDHL VAVALLAAGAWPDGRASD EDC+DPTPL +FASFG D LTAL AVENGHLEVVRTL EAGADVNL+ ED DE+PPLV AA XXXXXXXXXXXXXXXXXX FGHDGFSALH+AKDVR IEQGI++DYDSHGCDEATP+GWLCLKTHQRFSPLQ +G E AG AALSSE EIERATAMV+LLL RGAKIDSKAGCVGHCL TGARGPPLSAAVYNGT AICAAL+DKGADLDATDW LQDF +D DVKIRPIHDAARFGDVDILRLLLVAGAGAN LSN +DD L RWGTPLHVA CRYSQ+GCVRELLRWGAD+WAEEK SG XXXXXXX PC+CESC AGCGK P EVI LRD VTN EI AR SDS +LLA RLAKQ VSAD G +TAASSA T +RSQVL DDELLAIAGRMANLG QG FRHIVTFL
Sbjct: 7 MAQNTPLSAAAPLHDAAGVGDAVAVAGLLKDSAHRNARVDREGYSYSDGATALHIAAREDHLSVAVALLAAGAWPDGRASD-EDCEDPTPLHEASARGGVEVTKALLQAGARKDIFASFGRDGPFLTALDLAVENGHLEVVRTLVEAGADVNLIYEDGCDEVPPLVTAAKXXXXXXXXXXXXXXXXXXXFGHDGFSALHEAKDVRVMEVLLDAGADIEQGISTDYDSHGCDEATPVGWLCLKTHQRFSPLQSVGYECTAG-AALSSEDEIERATAMVKLLLRRGAKIDSKAGCVGHCLRTGARGPPLSAAVYNGTTAICAALVDKGADLDATDWELQDFGSDLDVKIRPIHDAARFGDVDILRLLLVAGAGANSLSNVHRDDDLKRWGTPLHVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACRYSQVGCVRELLRWGADMWAEEKQ-SGXXXXXXXXXEKVPCECESCFSNSAGCGKIPEEVIALRDAVTNEEINARPSDS---------------------ILLAARLAKQ-VSADGGATTAASSAKTVKRSQVLA-DDELLAIAGRMANLGGSRQGAFRHIVTFL 574
BLAST of mRNA_E_fasciculatus_S2_contig7568.15728.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN5_9PHAE) HSP 1 Score: 541 bits (1394), Expect = 2.160e-187 Identity = 308/396 (77.78%), Postives = 325/396 (82.07%), Query Frame = 1
Query: 1 MAQNTPLPAAAPLHDAAGVGDPVAVAGMLKDGADHNAKVDRQGYSYNDGVTALHIAAREDHLPVAVALLAAGAWPDGRASDDEDCQDPTPLXXXXXXXXXXXXXXXXXXXXXXXLFASFGEDLT-LTALSRAVENGHLEVVRTLAEAGADVNLLPEDNWDEIPPLVAAAXXXXXXXXXXXXXXXXXXXGFGHDGFSALHQAKDVRXXXXXXXXXXXIEQGINSDYDSHGCDEATPIGWLCLKTHQRFSPLQRLGCELEAGEAALSSESEIERATAMVQLLLIRGAKIDSKAGCVGHCLLTGARGPPLSAAVYNGTAAICAALIDKGADLDATDWALQDFEADGDVKIRPIHDAARFGDVDILRLLLVAGAGANCLSNFRQDDHLGRWGTPLHVACR 1185
MAQNTPL AAAPLHDAAGVGD VAVAG+LKD A NA+VDR+GYSY+DG TALHIAAREDHL VAVALLAAGAWPDGRASD EDC+DPTPL +FASFG D LTAL AVENGHLEVVRTL EAGADVNL+ ED DE+PPLV AA XXXXXXXXXXXXXXXXXX FGHDGFSALH+AKDVR IEQGI++DYDSHGCDEATP+GWLCLKTHQRFSPLQ +G E AG AALSSE EIERATAMV+LLL RGAKIDSKAGCVGHCL TGARGPPLSAAVYNGT AICAAL+DKGADLDATDW LQDF +D DVKIRPIHDAARFGDVDILRLLLVAGAGAN LSNFR+ D L RWGTPLHVACR
Sbjct: 7 MAQNTPLSAAAPLHDAAGVGDAVAVAGLLKDSAHRNARVDREGYSYSDGATALHIAAREDHLSVAVALLAAGAWPDGRASD-EDCEDPTPLHEASARGGVEVTKALLQAGARKDIFASFGRDGPFLTALDLAVENGHLEVVRTLVEAGADVNLIYEDGCDEVPPLVTAAKXXXXXXXXXXXXXXXXXXXFGHDGFSALHEAKDVRVMEVLLDAGADIEQGISTDYDSHGCDEATPVGWLCLKTHQRFSPLQSVGYECTAG-AALSSEDEIERATAMVKLLLRRGAKIDSKAGCVGHCLRTGARGPPLSAAVYNGTTAICAALVDKGADLDATDWELQDFGSDLDVKIRPIHDAARFGDVDILRLLLVAGAGANSLSNFRRGDVLQRWGTPLHVACR 400
BLAST of mRNA_E_fasciculatus_S2_contig7568.15728.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQT4_ECTSI) HSP 1 Score: 531 bits (1369), Expect = 2.620e-183 Identity = 329/464 (70.91%), Postives = 346/464 (74.57%), Query Frame = 1
Query: 1 MAQNTPLPAAAPLHDAAGVGDPVAVAGMLKDGADHNAKVDRQGYSYNDGVTALHIAAREDHLPVAVALLAAGAWPDGRASDDEDCQDPTPLXXXXXXXXXXXXXXXXXXXXXXXLFASFGED-LTLTALSRAVENGHLEVVRTLAEAGADVNLLPEDNWDEIPPLVAAAXXXXXXXXXXXXXXXXXXXGFGHDGFSALHQAKDVRXXXXXXXXXXXIEQGINSDYDSHGCDEATPIGWLCLKTHQRFSPLQRLGCELEAGEAALSSESEIERATAMVQLLLIRGAKIDSKAGCVGHCLLTGARGPPLSAAVYNGTAAICAALIDKGADLDATDWALQDFEADGDVKIRPIHDAARFGDVDILRLLLVAGAGANCLSNFRQDDHLGRWGTPLHVACRYSQLGCVRELLRWGADVWAEEKHCSGE-GXXXXXXXXXXPCQCESCLPQLAGCGKTPAEVIGLRDVVT 1386
MAQNTPLPAAAPLHDAAGVGD VAVA +LKDGAD NA+VDR+GYSY+DG TALHIAAREDHL VAV LLAAGAWPD P +FASFG LTAL AVENGHLEVVRTLAEAGADVNL+ ED + E+PPLV A XXXXXXXXXXXXXXXXXXXGFG DGFSALHQAKDVR IEQGI +DYDSHG W+ + +G AALSSE +IERATAMVQLLL RGAKIDSKAGCVGHCL TGARGPPLSAAVY+GT AICAALIDKGADLDATDW LQDF+ D DVKIRPIHDAARF VDILRLLL AGAGAN LSNFR+ D L RWGTPLHVACRYSQLGCVRELLRWGADVWAEEK GE XXXXXXXX PC+CESCLPQ AGCGK PAEVIGLRDVVT
Sbjct: 1 MAQNTPLPAAAPLHDAAGVGDAVAVADLLKDGADRNARVDREGYSYSDGATALHIAAREDHLSVAVVLLAAGAWPDVTKIAKIQLHFTRP----PRGGRVEVAKALLKAGAGKDIFASFGTGGPRLTALDLAVENGHLEVVRTLAEAGADVNLIYEDRYVEVPPLVTAXXXXXXXXXXXXXXXXXXXXGFGQDGFSALHQAKDVRVMEVLLNAGADIEQGITTDYDSHGM-------WVT---------------DWRSG-AALSSEDDIERATAMVQLLLRRGAKIDSKAGCVGHCLRTGARGPPLSAAVYSGTTAICAALIDKGADLDATDWELQDFDVDSDVKIRPIHDAARFRGVDILRLLLGAGAGANSLSNFRRGDDLERWGTPLHVACRYSQLGCVRELLRWGADVWAEEKQSGGEEXXXXXXXXXKAPCECESCLPQSAGCGKAPAEVIGLRDVVT 437
BLAST of mRNA_E_fasciculatus_S2_contig7568.15728.1 vs.
Match: Similar (to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI67_ECTSI) HSP 1 Score: 82.4 bits (202), Expect = 8.750e-13 Identity = 98/334 (29.34%), Postives = 127/334 (38.02%), Query Frame = 1
Query: 697 TPIGWLCLKTHQRFSPLQRLGCELEAGEAALSSESEIERATAMVQLLLIRGAKIDSKAGCVGHCLL--------TGARGPPLSAAVYNGTAAICAALIDKGADLDATD---WALQDFEADGDVKIRPIHDAARFGDVDILRLLLVAGAGANCLSNFRQDDHLGRWGTPLHVACRYSQLGCVRELLRWGADVWAEEKHCS------GEGXXXXXXXXXXPC---QCESCLPQLA--------GCGKTPAEVIGLRDVVT-------NGEIKARLSDS----------------------TTVGDSDGIRR----ELLWWRRCAVVLLADRLAKQR 1515
TP+G C H+ LE + + + ATA V+ LL GA + + G A P LS A NG I +AL+ G D + D WA PIHDA + VD+LRLLL AGA + G W TPLH+ACRY+ + CV ELLRW A + E+ S G P E P+ G GKTPAEV+GL+++ +G R S T VG+ + IRR E W RR VL+ L +QR
Sbjct: 304 TPLGSYCTLIHR-----------LETDDRGMRN------ATAKVEALLRYGASVHIRPTTAGDLSFLPHASPATVAAASPILSCAAKNGVPGIVSALLGAGLDPNERDRDGWA-------------PIHDAVQGDHVDVLRLLLRAGAERDA------PTRSGGW-TPLHLACRYTSVECVVELLRWNASLGPAERPSSFNARAEGSAVHRPGNNETKPIFGVALEDYPPEXXXXXXXXXNGYGKTPAEVVGLKNLAAASTGPAGSGGSGHRADPSLDEXXXXXXXXXXXXXETGDRNTGVGERNAIRRALRREAAWRRRRGAVLVKVCLERQR 600 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7568.15728.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7568.15728.1 >prot_E_fasciculatus_S2_contig7568.15728.1 ID=prot_E_fasciculatus_S2_contig7568.15728.1|Name=mRNA_E_fasciculatus_S2_contig7568.15728.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=560bp MAQNTPLPAAAPLHDAAGVGDPVAVAGMLKDGADHNAKVDRQGYSYNDGVback to top mRNA from alignment at E_fasciculatus_S2_contig7568:810..2804- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7568.15728.1 ID=mRNA_E_fasciculatus_S2_contig7568.15728.1|Name=mRNA_E_fasciculatus_S2_contig7568.15728.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1995bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7568:810..2804- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7568:810..2804- >mRNA_E_fasciculatus_S2_contig7568.15728.1 ID=mRNA_E_fasciculatus_S2_contig7568.15728.1|Name=mRNA_E_fasciculatus_S2_contig7568.15728.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1680bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7568:810..2804- (Ectocarpus fasciculatus EfasUO2)back to top |