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Homology
BLAST of mRNA_E_fasciculatus_S2_contig7565.15726.1 vs.
Match: Peptidase (A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFF6_9PHAE) HSP 1 Score: 490 bits (1261), Expect = 6.070e-164 Identity = 274/343 (79.88%), Postives = 285/343 (83.09%), Query Frame = 1
Query: 1 MIADMIGAMCIKFTEVMEASSSSSVEVIQCMDDPREVQLILVECATDFADINFYFGGDDFALTETELLQPLTDFATTDSQFDPMCIFGMVGADLTDTWVLGDPFLRTFYTAYNVQTQTVGLAKATGSRTGEACAADAALDSSAPSTAVPADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGVVAGLGTMALLALGVVVLAVRQRWKRTGGGVYRSAMSQVGXXXXXXXXXFEMSKGMSSSMAARHGGEAVEREEDFLQASPCDSSFRSSSNASAG-GARSKRVVRTGQGGDEVAAGGAAAGAGAPGVFGRLLGGAPARAGFAAFEDDADDGDAGVQ 1026
MIADMIGAMCIKFTEVMEASSSSS ++I+CM+DPREV+LILVECATDF DINF+FGGDDFALTETELLQPLTDFA+TDS FDPMCIFGM+GADLTDTWVLGDPFLRTFYTAYNVQTQTVG+A+ATGSRTGEAC ADAALDS APS AVPAD VGVVAGLGTMALL LGVV LAVRQRWKRTGGGVYRSAMSQVG FEMSKGMSSSMAARHG EAVEREEDFLQASPCDSSFRSSSNASAG G RSKRV+RTGQGGDEVAAGG A GAGAPGVFGRLLGGAPARAGFAAFED ADDGDAGVQ
Sbjct: 297 MIADMIGAMCIKFTEVMEASSSSSADIIECMNDPREVELILVECATDFDDINFFFGGDDFALTETELLQPLTDFASTDSVFDPMCIFGMIGADLTDTWVLGDPFLRTFYTAYNVQTQTVGIARATGSRTGEACEADAALDSGAPSAAVPAD----GDDDGAGLGVASAPEGANSSEVVEGETSVVTVGVVAGLGTMALLGLGVVALAVRQRWKRTGGGVYRSAMSQVGGGGGSGG--FEMSKGMSSSMAARHGEEAVEREEDFLQASPCDSSFRSSSNASAGSGGRSKRVIRTGQGGDEVAAGGTATGAGAPGVFGRLLGGAPARAGFAAFED-ADDGDAGVQ 632
BLAST of mRNA_E_fasciculatus_S2_contig7565.15726.1 vs.
Match: Peptidase (A1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9J8_ECTSI) HSP 1 Score: 425 bits (1093), Expect = 7.470e-143 Identity = 255/344 (74.13%), Postives = 267/344 (77.62%), Query Frame = 1
Query: 1 MIADMIGAMCIKFTEVMEASSSSSVEVIQCMDDPREVQLILVECATDFADINFYFGGDDFALTETELLQPLTDFATTDSQFDPMCIFGMVGADLTDTWVLGDPFLRTFYTAYNVQTQTVGLAKATGSRTGEACAADAALDSSAPSTAVPADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGVVAGLGTMALLALGVVVLAVRQRWKRTGGGVYRSAMSQV-GXXXXXXXXXFEMSKGMSSSMAARHGGEAVEREEDFLQASPCDSSFRSSSNASAGGARSKRVVRTGQGGDEVAAGGAA-AGAGAPGVFGRLLGGAPARAGFAAFEDDADDGDAGVQ 1026
MIADMIGAMCIKFTEVMEASSSSSVEVI+CM+DPR+VQLILVECATDF DINF+FGGDDFALTETELLQPLTDFATTDS FDPMCIFGM+GAD+TDTWVLGDPFLR+FYTAYNVQTQTVG+A+ATGSRTGEAC ADAALDS+AP+ AVPAD VGVVAGLGTMALLALGVV LAVRQRWKRTGGGVYRSAMSQV XXXXXXXX EMSKGMSSSMAARHGGEAVEREEDFLQASPC+SSFR AGAGAPGVFGRLLGGAPARAGFAAFED ADDGDAGVQ
Sbjct: 1 MIADMIGAMCIKFTEVMEASSSSSVEVIECMNDPRDVQLILVECATDFDDINFFFGGDDFALTETELLQPLTDFATTDSMFDPMCIFGMIGADMTDTWVLGDPFLRSFYTAYNVQTQTVGIARATGSRTGEACEADAALDSAAPAAAVPAD----GDDDGAGLGIASAPEGSSSSEVVGEETSVVTVGVVAGLGTMALLALGVVALAVRQRWKRTGGGVYRSAMSQVDSGXXXXXXXXXEMSKGMSSSMAARHGGEAVEREEDFLQASPCNSSFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGAPGVFGRLLGGAPARAGFAAFED-ADDGDAGVQ 339
BLAST of mRNA_E_fasciculatus_S2_contig7565.15726.1 vs.
Match: Peptidase (A1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFQ5_9PHAE) HSP 1 Score: 152 bits (384), Expect = 1.780e-35 Identity = 81/139 (58.27%), Postives = 100/139 (71.94%), Query Frame = 1
Query: 4 IADMIGAMCIKFTEVMEASSSSSVEVIQCMDDPREVQLILVECATDFADINFYFGGDDFALTETELLQPLTDFA---TTDSQFDPMCIFGMVGADLTDTWVLGDPFLRTFYTAYNVQTQTVGLAKATGSRTGEACAADA 411
+A+ IGA C+ FT V SSSVE + C+ +PREV+LIL+EC ++F DINF FGGDDFALT ELLQPLTDF + S +P C+FGM+G + W+LGD FLRTFYTAYNV+ +TVGLA+AT R G C ADA
Sbjct: 309 LAEEIGATCVYFTGV----DSSSVETMDCVSNPREVELILMECDSEFDDINFSFGGDDFALTSNELLQPLTDFVPSTVSSSSTEPWCLFGMLGHQ-ENMWILGDSFLRTFYTAYNVEDKTVGLARATALRIGGECEADA 442
BLAST of mRNA_E_fasciculatus_S2_contig7565.15726.1 vs.
Match: Peptidase (A1 domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162TTD8_PHYB8) HSP 1 Score: 56.6 bits (135), Expect = 7.410e-5 Identity = 31/90 (34.44%), Postives = 48/90 (53.33%), Query Frame = 1
Query: 121 LVECAT--DFADINFYFGGDDFALTETELLQPLTDFATTDSQFDPMCIFGMVGADLTDT----WVLGDPFLRTFYTAYNVQTQTVGLAKA 372
+++CA D + F FGG D+ LT + + + D CI G +G D+ + W++GD FLR FY+ Y+++ VGLAKA
Sbjct: 321 ILDCAKIPDLPEFCFVFGGKDYCLTGQDYVLKVQD----------QCISGFIGMDIPEPAGPLWIVGDVFLRKFYSVYDLKNNRVGLAKA 400
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7565.15726.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
| Match Name | E-value | Identity | Description | |
|---|
| Peptidase | 6.070e-164 | 79.88 | A1 domain-containing protein n=1 Tax=Ectocarpus sp... | [more] |
| Peptidase | 7.470e-143 | 74.13 | A1 domain-containing protein n=1 Tax=Ectocarpus si... | [more] |
| Peptidase | 1.780e-35 | 58.27 | A1 domain-containing protein n=2 Tax=Ectocarpus Ta... | [more] |
| Peptidase | 7.410e-5 | 34.44 | A1 domain-containing protein n=1 Tax=Phycomyces bl... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 154.1 |
| Seed ortholog evalue | 1.2e-34 |
| Seed eggNOG ortholog | 2880.D7FJG5 |
| Model size | 1719 |
| KEGG ko | ko:K01378,ko:K01379,ko:K06002,ko:K08245 |
| KEGG Pathway | ko04071,ko04140,ko04142,ko04210,ko04915,ko04974,ko05152,map04071,map04140,map04142,map04210,map04915,map04974,map05152 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| EggNOG free text desc. | aspartic-type endopeptidase activity |
| EggNOG OGs | KOG1339@1,KOG1339@2759 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-00_009120.1 |
| EC | 3.4.23.1,3.4.23.4,3.4.23.40,3.4.23.5 |
| Cds size | 1029 |
| COG Functional cat. | M |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01002,ko04147 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842417.740905-CDS-E_fasciculatus_S2_contig7565:3703..3784 | 1696842417.740905-CDS-E_fasciculatus_S2_contig7565:3703..3784 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7565 3704..3784 + |
| 1696842417.7526748-CDS-E_fasciculatus_S2_contig7565:4620..4728 | 1696842417.7526748-CDS-E_fasciculatus_S2_contig7565:4620..4728 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7565 4621..4728 + |
| 1696842417.7641008-CDS-E_fasciculatus_S2_contig7565:5374..5478 | 1696842417.7641008-CDS-E_fasciculatus_S2_contig7565:5374..5478 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7565 5375..5478 + |
| 1696842417.775632-CDS-E_fasciculatus_S2_contig7565:5972..6708 | 1696842417.775632-CDS-E_fasciculatus_S2_contig7565:5972..6708 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7565 5973..6708 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842417.7861578-UTR-E_fasciculatus_S2_contig7565:6708..7398 | 1696842417.7861578-UTR-E_fasciculatus_S2_contig7565:6708..7398 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig7565 6709..7398 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7565.15726.1 >prot_E_fasciculatus_S2_contig7565.15726.1 ID=prot_E_fasciculatus_S2_contig7565.15726.1|Name=mRNA_E_fasciculatus_S2_contig7565.15726.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=343bp
MIADMIGAMCIKFTEVMEASSSSSVEVIQCMDDPREVQLILVECATDFAD
INFYFGGDDFALTETELLQPLTDFATTDSQFDPMCIFGMVGADLTDTWVL
GDPFLRTFYTAYNVQTQTVGLAKATGSRTGEACAADAALDSSAPSTAVPA
DDDDDGDDGAGLGVASAPEDASSSGEVEEEETSVVAVGVVAGLGTMALLA
LGVVVLAVRQRWKRTGGGVYRSAMSQVGGGGGGGGGGFEMSKGMSSSMAA
RHGGEAVEREEDFLQASPCDSSFRSSSNASAGGARSKRVVRTGQGGDEVA
AGGAAAGAGAPGVFGRLLGGAPARAGFAAFEDDADDGDAGVQ* back to topmRNA from alignment at E_fasciculatus_S2_contig7565:3704..7398+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig7565.15726.1 ID=mRNA_E_fasciculatus_S2_contig7565.15726.1|Name=mRNA_E_fasciculatus_S2_contig7565.15726.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3695bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7565:3704..7398+ (Ectocarpus fasciculatus EfasUO2)
ATGATTGCCGACATGATCGGTGCCATGTGTATCAAGTTCACCGAGGTTAT
GGAGGCATCCTCCTCGTCCTCTGTTGAAGTGGTGAGTACCTGCATCGGCT
GCTGCTATGCGTAGCTTTATCTCTGTGCTGCTTTGTTTTGTTCGTTGCGG
TTGCTCTCTCTCTCTCTCTCTCTCTGTTCTGGTTTCTGCGTTTTCTTTTC
TGTACGGTTTGGAGAAGGTGCCTGATTTCTTTGGGGGTCGGGGATGGATT
GCGAGGTCTCCGCCTCGAAGCGCGTCTGCGCTTCTCCAGTGGTGGAGGGA
ATCATCGCTCGCACATGCCGCTTGCTCTGCGTGTTGGCAGTCTAGTTCCA
CTTCATTTTTGAGTGCGTTCGTCAACCGTCAGTACGTGCGGGTTGGCCTA
TGAAAACGCGTTTCGGTCTTTTCTCCCTGCGTATGTGCGTTTTTTTGTGC
TTGTGGGCCATAACGGCGTTCACAGGCACGCATGTGCGTTTTTTGCCCAG
TGGTTGTGGTTGGACAAACAAAAACGTCGGATGGGATGGGATGGGATGGG
ATGGGATGGGATGGGATGGGATGGGATGGATGAGGACCGTGTTCTCGACC
GTCACACAGTACGTGCGGTCCTCCCGTCACGGCGAGGAGGACAAAAAAGC
CTCCGTGCCTTTCACCAGCCGGCGGAAACCCAGCTCCCCCCGCCCGGTCT
ACTGACGTGTGGGATGCCCCCCCCTTGCCTGCTGGCGTGAGGGATGTTCT
GCATCAGGGAGCACATGACGGCATGTACGTGGTGTACACATGTTCACCAC
GTAAGCGCGCCGAGAATGCCGAGGAAAAACGGTGGATAATGTTGAAACAT
GCCGCTTATTTATCTATATACAATGTCCCCCCTTTCTCTCGCTCCCCCCA
CGGCACCATGCCCACAGATCCAATGCATGGATGACCCTCGCGAGGTGCAA
TTGATCTTGGTGGAGTGTGCCACCGACTTCGCCGACATCAACTTCTACTT
CGGCGGGGATGACTTCGCCCTCACGGTAATTTACCGCAATCTTAATCTTC
TTTTAGCGCCCACCCTCGCACGCGGTCACCTGATTTCACCCCAGCGTAGC
CCGACCACGCGCCAACCTACTTGGTTGTTTTTAACGACGGCGGCGCTGTG
TATTCCATACTTTCCATGGAGAGAGTTTCCTTCGCCGCAGAAACCCTCCC
CCCACCCCTGTTTTGATTTTTTTTTCTCATTGGCTCTTTTCCCCACGCGC
CAGCAAATTGTTGTGTTGTGCCCCTCTCTCTGGTGATGCCACTCTCTTCT
CTATCCGTTCGTCTTCTCGACCTGGCTCGCTCGCCGTTTGCAACGTTCGT
TACATTTGTTTCCTTCTCTCCATTGTGTTATACCTCTGTTTGTGTTTATG
GACGATGCGATACGATGCTGCTGCTGTAGGCTTATGTTCTCTGTCTGTCG
TTGCTCATTTTCTGCCTGCCTGTCTGTCGCGCTTGTCTGTTCTGTCTCGC
TTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCT
GTCTGTCTGTCTGTCTGTCTGTTTGTTTGTGTCATCATCTGTCTGTTTAC
ACCTCTTTGCCTCCTCTTGTCTCTGCTCCCGCCTATTCCCATGACATTCC
ATGATATCAAACGCAATGCAGGAGACGGAGCTGCTCCAACCCTTGACTGA
CTTCGCAACAACGGACTCACAGTTCGACCCCATGTGTATCTTCGGCATGG
TCGGGGCAGATCTGACTGACACTTGGTGAGTTATTAGCAGACCACCGCCC
CTTTCGAAGCAAGAGGGCGATCGATGGCTTTGCTACTTAAGGTAGACGGT
TGCCGACGAAGGGGAAGGGGACTCGGATACCGCGAGAAGCTTCGATCATA
ACCTAACCATGGCACAAAAACTGTCTCTCTTTCTTTGATGGTATGTATCC
TTCCGACGGCAACCACGGCACGAAAGAAAAGCTCTCTGTCTTTCTTGGAT
GGTACGGTACTTCTGTATCCTGCCCACGGTATCCACGGGACGAAAACGTT
GGTCTTTCGTTGATGGTATGTATGTATCCTCTCTAATAAATGGAGAGCTT
CTCACCCTCCCGCCGTGGTAGTCACTGCAAGCCTTGACGATTTTTGGTCC
CCCTCTTGCCCCCCCCCCCCCTCTTGTTGCGTGTGCCTTTTGCTGGCATC
GGGACGGCGGCTGCTGGATGACGACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAGGGTCCTGGGCGATCCGTTCCTGCGCACCTTC
TACACGGCGTACAACGTGCAGACCCAAACGGTAGGGTTAGCCAAGGCCAC
GGGCAGCCGCACCGGCGAAGCGTGCGCGGCGGATGCCGCCCTCGATTCGT
CGGCACCATCAACGGCTGTTCCTGCGGACGATGATGATGACGGTGATGAT
GGTGCTGGGTTAGGCGTTGCGAGCGCGCCGGAGGACGCAAGCAGCAGCGG
CGAGGTGGAGGAGGAGGAGACGAGCGTGGTGGCCGTTGGCGTGGTCGCGG
GTCTGGGAACGATGGCCTTGCTCGCCCTCGGCGTGGTGGTGCTGGCGGTG
CGGCAGCGCTGGAAGAGAACGGGGGGAGGCGTGTACCGGTCTGCCATGAG
CCAGGTCGGCGGGGGCGGCGGCGGCGGGGGCGGGGGTTTCGAGATGTCGA
AGGGTATGTCCTCATCCATGGCGGCGCGCCACGGGGGGGAGGCCGTCGAG
CGCGAGGAAGACTTCCTGCAGGCCTCGCCCTGTGACAGCAGCTTCCGCTC
GTCGTCCAATGCCTCCGCGGGAGGCGCCCGCTCGAAGAGAGTCGTCCGCA
CGGGCCAGGGCGGAGACGAGGTGGCGGCGGGCGGCGCCGCTGCCGGCGCC
GGAGCGCCGGGGGTGTTCGGAAGACTGCTCGGCGGGGCCCCCGCGCGGGC
GGGTTTCGCCGCCTTCGAGGACGACGCTGACGACGGGGATGCGGGGGTAC
AGTAGGAGGAGGAGTAGGAGTAGCGTGAGCGCACATGGATGTAGCGCGTA
GGAAGTCTGGCACGAAATGTGAGACGGAAGGAGGGCGGCGGGTTTTTGTG
GTGCTGCTGTCACAGCAGGCCAGCGGTTTTCCATGTGGAACGACGCGAGC
GAGCGGCTTGTGGCGCCTCGCATCTCTTCTCCTTGTTTCTGAACGTTGTT
GTTTTCGTTCCATGTGTTTGGCGTGCTTGCTTCCGAATATCTTGTTGTCG
GTGGAAGCTTTAACTTTTGGCTTGTATGCATATCCAGACTTGTTTTAGTA
TGAATGTTGTCCGCATCCTAGGGTTTCTATACATAACGTTTGTTGGACTT
AGGCGACTGTTTGTTTTGACGTCTCTTGGTTGGTGTTGATCGATCGGATG
GTGGGACAATCTTACCCTGGTTATCTCGTTTAGTTGGGCGAAAACAAGGG
TCGGCACACGGCGGTGTCCGTTGATATTGAACAGTAACTTTGCTAGCGGA
GCCAAACGTGACCAACATATAGATACATTCCTGGCCGGTCGCCCCGGTGG
TTTAGTTGGTATCCACGTAATCTTCTAGCGACCAGGTCACGGGTTCAAAT
CTCGGCGGGAGTGGGTTTTTCTCACTTTCGTATCTGGTAGTGGAAAGCGA
TAAAAAGCTGAAAAGCTTCGTGAGTAAACAAAATTCGACTTCACT back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig7565:3704..7398+ >mRNA_E_fasciculatus_S2_contig7565.15726.1 ID=mRNA_E_fasciculatus_S2_contig7565.15726.1|Name=mRNA_E_fasciculatus_S2_contig7565.15726.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1029bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7565:3704..7398+ (Ectocarpus fasciculatus EfasUO2)
ATGATTGCCGACATGATCGGTGCCATGTGTATCAAGTTCACCGAGGTTAT
GGAGGCATCCTCCTCGTCCTCTGTTGAAGTGATCCAATGCATGGATGACC
CTCGCGAGGTGCAATTGATCTTGGTGGAGTGTGCCACCGACTTCGCCGAC
ATCAACTTCTACTTCGGCGGGGATGACTTCGCCCTCACGGAGACGGAGCT
GCTCCAACCCTTGACTGACTTCGCAACAACGGACTCACAGTTCGACCCCA
TGTGTATCTTCGGCATGGTCGGGGCAGATCTGACTGACACTTGGGTCCTG
GGCGATCCGTTCCTGCGCACCTTCTACACGGCGTACAACGTGCAGACCCA
AACGGTAGGGTTAGCCAAGGCCACGGGCAGCCGCACCGGCGAAGCGTGCG
CGGCGGATGCCGCCCTCGATTCGTCGGCACCATCAACGGCTGTTCCTGCG
GACGATGATGATGACGGTGATGATGGTGCTGGGTTAGGCGTTGCGAGCGC
GCCGGAGGACGCAAGCAGCAGCGGCGAGGTGGAGGAGGAGGAGACGAGCG
TGGTGGCCGTTGGCGTGGTCGCGGGTCTGGGAACGATGGCCTTGCTCGCC
CTCGGCGTGGTGGTGCTGGCGGTGCGGCAGCGCTGGAAGAGAACGGGGGG
AGGCGTGTACCGGTCTGCCATGAGCCAGGTCGGCGGGGGCGGCGGCGGCG
GGGGCGGGGGTTTCGAGATGTCGAAGGGTATGTCCTCATCCATGGCGGCG
CGCCACGGGGGGGAGGCCGTCGAGCGCGAGGAAGACTTCCTGCAGGCCTC
GCCCTGTGACAGCAGCTTCCGCTCGTCGTCCAATGCCTCCGCGGGAGGCG
CCCGCTCGAAGAGAGTCGTCCGCACGGGCCAGGGCGGAGACGAGGTGGCG
GCGGGCGGCGCCGCTGCCGGCGCCGGAGCGCCGGGGGTGTTCGGAAGACT
GCTCGGCGGGGCCCCCGCGCGGGCGGGTTTCGCCGCCTTCGAGGACGACG
CTGACGACGGGGATGCGGGGGTACAGTAG back to top
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