mRNA_E_fasciculatus_S2_contig7556.15718.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7556.15718.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC06_9PHAE) HSP 1 Score: 856 bits (2211), Expect = 3.580e-302 Identity = 506/702 (72.08%), Postives = 539/702 (76.78%), Query Frame = 1
Query: 1 ATAKASHDPADPSSVFVDLLVNGDPAPLVFRVPPKKAPRRQPRLSDGGVSERQGGTGQQQGKXXXXXXX-WGLEKEWEED--ENIDEAIAAAAAAWCREFGANRPEDIAFVEAEIEKAVESAATAAXXXXXXXXXXRPTAATVGGNGR-HAPTAASEARNEGPSAAVSGA-PELLQGKNSELSDKDGVGRNRSDREDGSSSRRRAGRGTGEERLTLSSVLAPDVETGTSIFWVKVDPSLPEVYVTAGSSALEISERFCRTHNLGPSQVPLVAWKLLDAYPAQMEAARRDGTLLPERVTLRHAACQREVAFVLIVAVLWVARSRRWWLFKRGTPAPADYRRRKKGAALILSRAYRLMARAWGRRRSKSARGRRAVIPSPGECKGETPPVSQDRGGVHTSFIGRYLFGRVLRTAQEKNIAASCAEVNGDGLATAVAPTIAAKSAPRKGVMAPTEAAVDFATVHDENNDHRSSNKNGDDED-NRSDESLPSGGWLSS--LLSSWAEAALFEAGRVVGTFVRVAVMRPLTYVRRRGTKPDTPASPSKAKSKPVSVKSRRRIAKSNNPRRPGVVTPKRPRIAATGDGKTRE-------PRTERPVNGDVNLPGTCEGAGTCGVLPASV-------PPGRMIGAGRDIAEQVAAKPDPVSGRGSWTSVLDGLSRDPGNRFMQAAVLSSVGKVLARTDSFDIETHEACD 2040
ATA+ASHDP+DP+SVFVDLLVNGDPAPLVFR+PPKKAP RQPRLSDGGVSE+QG TGQQQ XXXXXXX WGL E+ +N EAI AAAAAWCREFG NRPED+AFVEAEIEKA+ES TAA G N R HAPTAA E R EG SAAVSGA ELLQ K+SELSD+ GV NRSDR D SSSRRR RGT E+RLTLSSVLAPDVETGTSIFWVKVDPSLPE YVTAGSSALEISERFCRTHNLGPSQV AWKLLDAYP QMEAARRDGTLLP RVTLRHAACQREVAFV IVAVLWVAR RRWWLFKR TPAPAD RRRKKG ALILSRAYRL+AR WGR R K+ RGRR VIPSPG C GE PPVS D+G V T FIGRY FGRVLRTA+ KN+ A+ AEV DG AT APTIAAK APRKG + TE AVD T NNDHRSS K DD D N S ESL GW S LLSSWAEAALFEAGRV GTFVRVAV+RPL YV RGTKP TPASP++ +SKPVS KSRRR A +NPRR G+V P RPRI A KT+E P T P +GDVN P T EGA C + P+SV PP M+GAG D AE+VAA D VSG GSWTSVLDGLS+DPGNRFMQ AVLSSVGKVLA+TDSF IETHEACD
Sbjct: 126 ATAEASHDPSDPASVFVDLLVNGDPAPLVFRIPPKKAPHRQPRLSDGGVSEQQGETGQQQXXXXXXXXXXWGLXXXXXEEAEKNKKEAIGAAAAAWCREFGTNRPEDMAFVEAEIEKAIESG----------------TAAAAGVNERQHAPTAALEPREEGRSAAVSGAREELLQSKDSELSDEGGVRPNRSDRGD-SSSRRRTKRGTAEKRLTLSSVLAPDVETGTSIFWVKVDPSLPEAYVTAGSSALEISERFCRTHNLGPSQV---AWKLLDAYPVQMEAARRDGTLLPARVTLRHAACQREVAFVSIVAVLWVARKRRWWLFKRATPAPADCRRRKKGTALILSRAYRLLARLWGRMRGKNTRGRRPVIPSPGGCMGERPPVSHDQGDVRTGFIGRYFFGRVLRTARGKNVTAARAEVGSDGPATTAAPTIAAKRAPRKGAITSTETAVDTTTAPGVNNDHRSSYKTDDDNDVNGSGESLLGNGWWPSSPLLSSWAEAALFEAGRVAGTFVRVAVIRPLAYVSGRGTKPHTPASPTRTRSKPVSGKSRRRNANGSNPRRTGIVAPNRPRIDAKECAKTQEKPAGIRKPPTGCPADGDVNAPDTFEGADACRMPPSSVAGVNQHVPPRCMVGAGTDKAEEVAANTDSVSGSGSWTSVLDGLSKDPGNRFMQVAVLSSVGKVLAKTDSFAIETHEACD 807
BLAST of mRNA_E_fasciculatus_S2_contig7556.15718.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G977_ECTSI) HSP 1 Score: 812 bits (2097), Expect = 3.490e-284 Identity = 484/711 (68.07%), Postives = 514/711 (72.29%), Query Frame = 1
Query: 1 ATAKASHDPADPSSVFVDLLVNGDPAPLVFRVPPKKAPRRQPRLSDGGVSERQGGTGQ-QQGKXXXXXXXWGLEKEWEEDENIDEAIAAAAA-AWCREFGANRPEDIAFVEAEIEKAVESAATAAXXXXXXXXXXRPTAATVGGNGR-HAPTAASEARNEGPSAAVSGAPELLQGKNSELSDKDGVGRNRSDREDGSSSRRRAGRGTGEERLTLSSVLAPDVETGTSIFWVKVDPSLPEVYVTAGSSALEISERFCRTHNLGPSQVPLVAWKLLDAYPAQMEAARRDGTLLPERVTLRHAACQREVAFVLIVAVLWVARSRRWWLFKRGTPAPADYRRRKKGAALILSRAYRLMARAWGRRRSKSARGRRAVIPSPGECKGETPPVSQDRGGVHTSFIGRYLFGRVLRTAQEKNIAASCAEVNGDGLATAVAPTIAAKSAPRKGVMAPTEAAVDFATVHDENNDHRSSNKNGD---DED-NRSDESLPSGGWLSSLLSSWAEAALFEAGRVVGTFVRVAVMRPLTYVRRRGTKPDTPASPSKAKSKPVSVKSRRRIAKSNNPRRPGVVTPKRPRIAATGDGKTREPRTE--RPVNG---DVNLPGTCEGAGTCGVLPASV---------PPGRMIGAGRDIAEQVAAKPDPVSGRGSWTSVLDGLSRDPGNRFMQAAVLSSVGKVLARTDSFDIETHEACDWVRLFKSKKA 2070
ATA+ASHDPADP+SVFVDLLVNGDPAPLVFR+PPKKAP RQPRLSDGGVSE QG TGQ QQG+ WG+E WEE AWCREFGANRPE+IAFVE EIEKAVESAA AA RP AAT G NGR HAPTAAS AR EG SAAVSGA ELLQ K SELSDKDGV RSD ED SSSR + RGT EERLTLSSVLAPDVE GTSIFWVKV AWKLLDAYPAQMEAARRDGTLLP RVTLRHAACQREVAFVLIVAVLWVARSRRWWLFKR TPAPADYRRRKKG LILSRAYRL+ARAWGR R K+ RGRR VIPSPG CK ETPPV DRG V T F+GRY FGRVLRTA+ KN+ A+ AEV+GDG A++ APTIAAK APRKG + PTE AVD T D NNDHRSS+ D D D N S ESLP GW SSWAEAALFEAGRV GTFVRV V+RPL Y RGTKP TPA PS+ KSKPVS KSRRR +NPRR G+V PKRPRI A GKT+E + P+ G DVN T EGA C + P+SV PPG M G GRD AE+VAAK D V G GSWTSVLDGLSRDPGNRFMQAAVLSSVGKVLA+TDSF+IETHEACDWVRLFKSKKA
Sbjct: 170 ATAEASHDPADPASVFVDLLVNGDPAPLVFRIPPKKAPHRQPRLSDGGVSELQGETGQPQQGREGEEKEEWGMEDAWEEXXXXXXXXXXXXXXAWCREFGANRPEEIAFVETEIEKAVESAAEAAEASAAV----RPAAATAGVNGRYHAPTAASGAREEGHSAAVSGARELLQRKESELSDKDGVRPKRSDLED-SSSRGKMRRGTVEERLTLSSVLAPDVEKGTSIFWVKV------------------------------------AWKLLDAYPAQMEAARRDGTLLPARVTLRHAACQREVAFVLIVAVLWVARSRRWWLFKRATPAPADYRRRKKGTPLILSRAYRLLARAWGRTRGKNTRGRRTVIPSPGGCKVETPPVCHDRGDVRTGFVGRYFFGRVLRTARGKNVTAARAEVDGDGPASSAAPTIAAKRAPRKGTITPTETAVDTTTAPDVNNDHRSSSYKNDXXXDGDVNGSGESLPGNGWS----SSWAEAALFEAGRVAGTFVRVGVIRPLAYFSGRGTKPHTPALPSRTKSKPVSAKSRRRNVIGSNPRRTGIVAPKRPRIDAKECGKTQEKPADIREPLAGFPADVNAQRTFEGADACRMPPSSVAAVKQNQYVPPGCMAGTGRDKAEEVAAKTDSVPGSGSWTSVLDGLSRDPGNRFMQAAVLSSVGKVLAKTDSFEIETHEACDWVRLFKSKKA 835 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7556.15718.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7556.15718.1 >prot_E_fasciculatus_S2_contig7556.15718.1 ID=prot_E_fasciculatus_S2_contig7556.15718.1|Name=mRNA_E_fasciculatus_S2_contig7556.15718.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=690bp ATAKASHDPADPSSVFVDLLVNGDPAPLVFRVPPKKAPRRQPRLSDGGVSback to top mRNA from alignment at E_fasciculatus_S2_contig7556:366..4204+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7556.15718.1 ID=mRNA_E_fasciculatus_S2_contig7556.15718.1|Name=mRNA_E_fasciculatus_S2_contig7556.15718.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3839bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7556:366..4204+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7556:366..4204+ >mRNA_E_fasciculatus_S2_contig7556.15718.1 ID=mRNA_E_fasciculatus_S2_contig7556.15718.1|Name=mRNA_E_fasciculatus_S2_contig7556.15718.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2070bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7556:366..4204+ (Ectocarpus fasciculatus EfasUO2)back to top |