mRNA_E_fasciculatus_S2_contig7529.15691.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7529.15691.1
Unique NamemRNA_E_fasciculatus_S2_contig7529.15691.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7529.15691.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK7_9PHAE)

HSP 1 Score: 633 bits (1633), Expect = 5.510e-215
Identity = 324/372 (87.10%), Postives = 345/372 (92.74%), Query Frame = 1
Query:    7 MSSSSVCVHSIQELLELENDMRSDLPSLDRDAKINLLKYLQVQRVQEYQVEYDRLYFTLSRGGNLECLR-DNITSARFTPMEQPKKLQGLQEYLADAQEAQPHLDKLIEDVVATCDGCEGRFVGVKSPDSVMRKAERFHGNMGKVADIARASVVCRTPEDLERAYTVIMARLNPQDVLRVKNGFSSDWMPSGYRDVKVNPVVNGHLCEIQLHLGEFFELKDGQHTVYEWARELRVTTETDPRYLFDDLSSETLEGMIRLAKVNWAGTEHVLPSLQLYTGKYVEAEEAFIKLLAEAEEQMQGAETNSQEWRNSLVNEAEASTKLGLASQLQGQYSKAAPLLQRSLKIREDVFGKDHPDVARSLQDHADLLTEQ 1119
            M SS+    +IQELLELE ++RS +PSLDRDAK+NLLKYLQVQRVQEYQVEYDRLYFTLSRGGNLE LR  N+ +AR  P+EQPKKL GLQEYLADAQEAQPHLDKLIEDVVATCDGCEGRFVG KSPDSVMRKAERF+GN+GK+AD+ARA+VVC TPEDLERAYTVIMARLNPQDVLRVKNGFSSDWMPSGYRDVKVNPVV GHLCEIQLHL EFFELKDGQHTVYEWARELRVTTETDPRYLFDDLSSETLE MIRLA+VNWAG EHVLPSLQLY GKYVEAEEAF KLLA AEEQMQGAE NS+EWRNSL+NEA+AS  LGLASQLQGQYSKAAPLLQRSLKIRED+ GKDHP+VARSLQD+ADLLTEQ
Sbjct:    1 MMSSAAATSNIQELLELEKEIRSKIPSLDRDAKVNLLKYLQVQRVQEYQVEYDRLYFTLSRGGNLEGLRRKNMAAARLKPVEQPKKL-GLQEYLADAQEAQPHLDKLIEDVVATCDGCEGRFVGTKSPDSVMRKAERFNGNVGKIADMARAAVVCGTPEDLERAYTVIMARLNPQDVLRVKNGFSSDWMPSGYRDVKVNPVVCGHLCEIQLHLREFFELKDGQHTVYEWARELRVTTETDPRYLFDDLSSETLEEMIRLAEVNWAGAEHVLPSLQLYMGKYVEAEEAFRKLLAGAEEQMQGAEANSEEWRNSLLNEAQASANLGLASQLQGQYSKAAPLLQRSLKIREDILGKDHPNVARSLQDYADLLTEQ 371          
BLAST of mRNA_E_fasciculatus_S2_contig7529.15691.1 vs.
Match: Kinesin (light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD2_ECTSI)

HSP 1 Score: 332 bits (852), Expect = 4.330e-98
Identity = 168/184 (91.30%), Postives = 174/184 (94.57%), Query Frame = 1
Query:  568 MPSGYRDVKVNPVVNGHLCEIQLHLGEFFELKDGQHTVYEWARELRVTTETDPRYLFDDLSSETLEGMIRLAKVNWAGTEHVLPSLQLYTGKYVEAEEAFIKLLAEAEEQMQGAETNSQEWRNSLVNEAEASTKLGLASQLQGQYSKAAPLLQRSLKIREDVFGKDHPDVARSLQDHADLLTEQ 1119
            MPSGYRDVKVNPVVNGHLCEIQLHL EFFELKDGQHTVYEWARELRVTTETDPRYLFDDLSSETLE MIRLA+VNWAG EHVLPSLQLY G YVEAEEAF KLLAEA+EQMQG ETNS+EWRNSL+NEA+AST LGLASQLQGQYSKAA LLQRSLKIRED+ GKDHPDVARSLQDHADLLTEQ
Sbjct:    1 MPSGYRDVKVNPVVNGHLCEIQLHLREFFELKDGQHTVYEWARELRVTTETDPRYLFDDLSSETLEEMIRLAEVNWAGAEHVLPSLQLYMGNYVEAEEAFRKLLAEAKEQMQGGETNSEEWRNSLLNEAQASTNLGLASQLQGQYSKAALLLQRSLKIREDLLGKDHPDVARSLQDHADLLTEQ 184          
BLAST of mRNA_E_fasciculatus_S2_contig7529.15691.1 vs.
Match: Kinesin (light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B1_ECTSI)

HSP 1 Score: 325 bits (834), Expect = 2.950e-97
Identity = 179/381 (46.98%), Postives = 246/381 (64.57%), Query Frame = 1
Query:   37 IQELLELENDMRSDLPS----------------LDRDAKINLLKYLQVQRVQEYQVEYDRLYFTLSRGGNLECLRDNITSARFTPMEQPKKLQG------------LQEYLADAQEAQPHLDKLIEDVVATCDGCEGRFVGVKSPDSVMRKAERFHG-NMGKVADIARASVVCRTPEDLERAYTVIMARLNPQDVLRVKNGFSSDWMPSGYRDVKVNPVVNGHLCEIQLHLGEFFELKDGQHTVYEWARELRVTTETDPRYLFDDLSSETLEGMIRLAKVNWAGTEHVLPSLQLYTGKYVEAEEAFIKLLAEAEEQMQGAETN-SQEWRNSLVNEAEASTKLGLASQLQGQYSKAAPLLQRSLKIREDVFGKDHPDVARSL 1089
            I ELL LEN+++ + PS                L+RDAK+NLLK+LQV+ V +Y+  YD LY+ L++ G LECLR    +   + + QP  L+             LQ Y   A+ A+  LD+L+++V+   +GCEG +  +K+ +S  RKA RF+G N+ +VAD+ARA+V+C TPEDLE AY  +MAR+ P DV RV NGF SDWMP+GYRDVK+NPVVNGHLCEIQL L  FF LK GQH VYEWAR+L+VTTET+  +L   LS E  + MIRLA+ NW GT   LP +QL   +Y +AEEAF + L + E++ +G +   S EWR +L +EA A + LG   + QG+  +A  L +RS+ I E ++G +HP++A  L
Sbjct:    7 INELLRLENELQGNAPSVWDKLFECVSIREPPSLERDAKVNLLKFLQVKTVDKYKRAYDNLYYELNKQGGLECLRRIEPAPAKSALLQPIVLEEQRCDADGEFSSQLQFYRKGAECAKEQLDELVQEVINGREGCEGVYPKIKTLESTKRKAVRFYGGNVRRVADMARAAVICNTPEDLETAYIGLMARIQPHDVKRVTNGFDSDWMPNGYRDVKLNPVVNGHLCEIQLQLRSFFNLKAGQHVVYEWARKLKVTTETEANHLIKILSREVTQEMIRLAEQNWRGTGEYLPHIQLDAAQYGQAEEAFRQRLCQVEDERRGIDDQTSNEWRENLQDEAWARSNLGFTLERQGKNDEAEALYRRSITIDEKLYGSNHPEIATDL 387          
BLAST of mRNA_E_fasciculatus_S2_contig7529.15691.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU99_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 8.610e-95
Identity = 179/381 (46.98%), Postives = 242/381 (63.52%), Query Frame = 1
Query:   37 IQELLELENDMRSDLPS----------------LDRDAKINLLKYLQVQRVQEYQVEYDRLYFTLSRGGNLECLRDNITSARFTPMEQPKKLQG------------LQEYLADAQEAQPHLDKLIEDVVATCDGCEGRFVGVKSPDSVMRKAERFHG-NMGKVADIARASVVCRTPEDLERAYTVIMARLNPQDVLRVKNGFSSDWMPSGYRDVKVNPVVNGHLCEIQLHLGEFFELKDGQHTVYEWARELRVTTETDPRYLFDDLSSETLEGMIRLAKVNWAGTEHVLPSLQLYTGKYVEAEEAFIKLLAEAEEQMQGAETN-SQEWRNSLVNEAEASTKLGLASQLQGQYSKAAPLLQRSLKIREDVFGKDHPDVARSL 1089
            I ELL LE +++ + PS                L+RDAK+NLLK+LQV+ V +Y+  YD LY+ L++ G LECLR    +   + + QP  L+             LQ Y   A+ A+  LD L+++V+   +GCEG +  +K+ +S  RKA RF+G N+ +VAD+ARA+V+C TPEDLE AY  +MAR+ P DV RV NGF +DWMP+GYRDVKVN VVNGHLCEIQL L  FF LK GQH VY+WAR L+VTTET+  +L   LS E  + MIRLA+ NW GT   LP +QL   +Y +AEEAF + L +AE++ +G E   S EWR +L +EA A   LG   + QG+  +A  L +RS+ I E V+G +HP++A  L
Sbjct:    7 INELLRLEKELQGNAPSVWDKLFECVSIREKPSLERDAKVNLLKFLQVKTVDKYKRAYDNLYYELNKQGGLECLRRIEPAPAKSALLQPIVLEEQSCDADEELSSQLQFYRKGAECAKEQLDGLVQEVINGREGCEGVYPKIKTLESTKRKAVRFYGGNVRRVADMARAAVICNTPEDLETAYIGLMARIQPHDVKRVSNGFDADWMPNGYRDVKVNLVVNGHLCEIQLQLRSFFNLKAGQHVVYKWARRLKVTTETEANHLIKTLSHEVTQEMIRLAEQNWRGTGEYLPHIQLDAAQYGQAEEAFRQRLCQAEDERRGIEDQTSNEWRENLQDEAWARNNLGFTLERQGKNDEAEALYRRSIAIDEKVYGSNHPEIATDL 387          
BLAST of mRNA_E_fasciculatus_S2_contig7529.15691.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC7_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 2.590e-92
Identity = 182/380 (47.89%), Postives = 243/380 (63.95%), Query Frame = 1
Query:   37 IQELLELENDMRS----DLPSLDRDAKINLLKYLQVQRVQEYQVEYDRLYFTLSRGGNLECLRDNITSARFTPMEQPKKLQG------------LQEYLADAQEAQPHLDKLIEDVVATCDGCEGRFVGVKSPDSVMRKAERF-HGNMGKVADIARASVVCRTPEDLERAYTVIMARLNPQDVLRVKNGFSSDWMPSGYRDVKVNPVVNGHLCEIQLHLGEFFELKDGQHTVYEWARELRVTTETDPRYLFDDLSSETLEGMIRLAKVNWAGTEHVLPSLQLYTGKYVEAEEAFIKLLAEAEEQMQ--GAETNSQEWRNSLVNEAEASTKLGLASQLQGQYSKAAPLLQRSLKIREDVFGKDHPDVARSLQDHADLLTEQ 1119
            I+ELL LEN++++    +      DAK+N+LK LQVQ V ++Q+ YD LY+ L++ G LECLR +I  AR T + QPK L              LQ YLADA+ A+PHLD+LI  V       + +   VKS +S  RKA     G++ KVAD+AR +V+C TPE L+ AY  IM  L   +VLRVKNGF+SDWMPSGYRDVK+NPVVN HLCEIQLHL EFF LK GQH VYEWAREL VTTE     LF ++S E ++ M+RLA  NW  T   LP LQL  G+Y  AEE+  +LL +AE        + +S+E R +L+    A  +L L  + QG++++A PL  R++++ E + G+DHPD+A S+ + A+LL  Q
Sbjct:    5 IEELLRLENELKASCERETSPATPDAKMNILKCLQVQTVVQFQLAYDDLYYELNKEGGLECLR-SIAPARSTGIVQPKVLDPQNCDEGGQLENQLQFYLADAELAKPHLDELITKVAHDSSKYKVQCADVKSWESTRRKASNSCGGDVRKVADMARVAVICATPEALKEAYLAIMG-LPEANVLRVKNGFNSDWMPSGYRDVKLNPVVNDHLCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDRAEESHRELLGDAENDAARVAEDHDSKESRQALLRVNAARARLALVLEKQGKHAEADPLYLRAIEVAEKMLGRDHPDLATSINNRAELLRAQ 382          
BLAST of mRNA_E_fasciculatus_S2_contig7529.15691.1 vs.
Match: Tetratricopeptide (TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQZ4_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 1.210e-88
Identity = 171/349 (49.00%), Postives = 228/349 (65.33%), Query Frame = 1
Query:  106 INLLKYLQVQRVQEYQVEYDRLYFTLSRGGNLECLRDNITSARFTPMEQPKKLQGLQE-------------YLADAQEAQPHLDKLIEDVVATCDGCEGRFVGVKSPDSVMRKAER-FHGNMGKVADIARASVVCRTPEDLERAYTVIMARLNPQDVLRVKNGFSSDWMPSGYRDVKVNPVVNGHLCEIQLHLGEFFELKDGQHTVYEWARELRVTTETDPRYLFDDLSSETLEGMIRLAKVNWAGTEHVLPSLQLYTGKYVEAEEAFIKLLAEAEEQMQGAETN-SQEWRNSLVNEAEASTKLGLASQLQGQYSKAAPLLQRSLKIREDVFGKDHPDVARSLQDHADL 1107
            +NLLKYLQ++ V +++  YDRL F L + G L CLR +I  AR    +QPK    LQ+             YL DA+ A+  LD+L++DV    +GCE + V VKS +S  RKA+  + GN+ +++D+AR SV+C  PEDL RA++ I+ RL P +V RV NGF SDWMPSGYRDVKVNPVVN H+CEIQL L +F+ELK  QH VYEWAREL VT + +   LF++LS E  E MIRLA+ NW GT + L  L    G+Y +AEE   K L+EAE+  +  E   S+EWR +L+ E+ A   LG A ++QG++++A PL +RS  IRE+V G  HPDVA  L + A L
Sbjct:    2 VNLLKYLQIETVHKFETAYDRLCFELDKDGGLTCLR-SIAPARSEDRQQPKVCSELQDGDEKAQLARQVEFYLQDARLAKSGLDELVKDVANEVEGCETKCVEVKSSESATRKAKSSYGGNVRRLSDMARVSVICDKPEDLARAFSGILGRLQPHEVRRVTNGFKSDWMPSGYRDVKVNPVVNEHVCEIQLQLRQFYELKHDQHAVYEWARELNVTAKMEAEQLFENLSREVTEEMIRLAEGNWRGTGYCLVDLLTMAGQYAKAEEGSRKGLSEAEDAFRCIEDRGSKEWREALLQESTARRNLGYALKMQGKHAEAEPLYERSQAIREEVLGPKHPDVAEVLNNRATL 349          
BLAST of mRNA_E_fasciculatus_S2_contig7529.15691.1 vs.
Match: Kinesin (light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L3_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 2.750e-87
Identity = 185/376 (49.20%), Postives = 239/376 (63.56%), Query Frame = 1
Query:   37 IQELLELENDMRS----DLPSLDRDAKINLLKYLQVQRVQEYQVEYDRLYFTLSRGGNLECLRDNITSARFTPMEQPK-----------KLQG-LQEYLADAQEAQPHLDKLIEDVVATCDGCEGRFVGVKSPDSVMRKAERF-HGNMGKVADIARASVVCRTPEDLERAYTVIMARLNPQDVLRVKNGFSSDWMPSGYRDVKVNPVVNGHLCEIQLHLGEFFELKDGQHTVYEWARELRVTTETDPRYLFDDLSSETLEGMIRLAKVNWAGTEHVLPSLQLYTGKYVEAEEAFIKLLAEAEEQMQGAETN-SQEWRNSLVNEAEASTKLGLASQLQGQYSKAAPLLQRSLKIREDVFGKDHPDVARSLQDHADLL 1110
            I +LL LE ++++    +  S   DAK+NLLKYLQVQ V ++Q  YD LY+ LS+ G L+CLR  I     T + QPK           +L+  LQ YLADA+ A+ HLD+L+ +V       E +FV VKS +S  RKA RF  G++ KVADIAR +V+C TPE L+ AY  IM  L  Q VL +KNGF SDWMPSGYRDVK+NPVVN HLCEIQLHL EFF LK GQH VYEWAR+L VTT+     LF+ LS++  + M+ LA  NW GT +VLP LQL  G+Y  AE++  + L +AE +++  E + S+E R +L  E EA ++L      QG+Y +A  L  RSL I E V+G DHP VA  L + A  L
Sbjct:    6 INDLLRLEAELKTSRERETSSTSLDAKVNLLKYLQVQTVLQFQAAYDDLYYELSKTGGLDCLR-TIAPVPSTGVFQPKVFDPQDCGEDEQLENQLQFYLADAELAKAHLDELVMNVAHDMSKYEVQFVDVKSRESTRRKASRFCDGDVRKVADIARVTVICTTPEALKEAYLAIM-ELPTQQVLLIKNGFKSDWMPSGYRDVKLNPVVNEHLCEIQLHLREFFALKGGQHAVYEWARDLNVTTDMRCEDLFETLSAKVTKEMLHLAGENWRGTGYVLPDLQLAAGEYDLAEKSQRQALTDAENEVREVEDHDSKESRWALDRENEARSRLATVLDKQGKYEEAETLCVRSLAIDEKVYGPDHPKVAIGLNNRAGFL 379          
BLAST of mRNA_E_fasciculatus_S2_contig7529.15691.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM9_9PHAE)

HSP 1 Score: 304 bits (778), Expect = 4.650e-86
Identity = 174/375 (46.40%), Postives = 240/375 (64.00%), Query Frame = 1
Query:   34 SIQELLELENDMRSDLP------SLDRDAKINLLKYLQVQRVQEYQVEYDRLYFTLSRGGNLECLRDNITSARFTPMEQPKKL--------QGLQEYLADAQEAQPHLDKLIEDVVATCDGCEGRFVGVKSPDSVMRKAERFH-GNMGKVADIARASVVCRTPEDLERAYTVIMARLNPQDVLRVKNGFSSDWMPSGYRDVKVNPVVNGHLCEIQLHLGEFFELKDGQHTVYEWARELRVTTETDPRYLFDDLSSETLEGMIRLAKVNWAGTEHVLPSLQLYTGKYVEAEEAFIKLLAEAEEQMQGAETNS-QEWRNSLVNEAEASTKLGLASQLQGQYSKAAPLLQRSLKIREDVFGKDHPDVARSLQDHADLL 1110
            SI++LL++E D++ D P      SL+R AKINLLK+LQV+ V  ++ +YD+L +  ++ G LEC+R  I  AR   M QP+K+        + L  YLA A+ A+  LD+L+++VV   +GCE +F  VKS +S  RK   F+ G++ KVAD+AR SVVC+ PEDL++AY  I   L P+D+ RV NGF SDWMPSGYRDVK+N VVNGHLCEIQLHL EF+ LK  QH VYEWAR+L VT       LF++LS E  + MIRLA+ NW  T  +LP LQL  G+Y  AE+   K L+EAE  ++G + N+  EW+     + +A+  LG   + QG+Y +A  L  R++   E   G  HP++A  + D A +L
Sbjct:   48 SIEDLLQVEADLKHDAPGSGIAMSLERRAKINLLKFLQVETVLHFERQYDQLCYERNKDGGLECVR-GIPPARMKDMLQPQKMKRQKCELAEKLHFYLAAAKVAKRCLDELVQNVVGGLEGCEVQFADVKSLESTERKTVNFYSGDVRKVADMARLSVVCQEPEDLKQAYVSITRTLKPRDIFRVTNGFISDWMPSGYRDVKLNAVVNGHLCEIQLHLREFYNLKRHQHVVYEWARDLNVTKAMVADQLFENLSGEVTDEMIRLAESNWHETGFLLPRLQLAAGRYAHAEDGHRKALSEAERAVRGLKDNATMEWKWVFRQQIQATADLGDCLERQGKYDEAETLYTRAIIDGEKTLGAGHPEIAVWMNDKAIVL 421          
BLAST of mRNA_E_fasciculatus_S2_contig7529.15691.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L226_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 1.920e-84
Identity = 172/412 (41.75%), Postives = 236/412 (57.28%), Query Frame = 1
Query:   37 IQELLELENDMR----SDLPSLDRDAKINLLKYLQVQRVQEYQVEYDRLYFTLSRGGNLECLRDNITSARFTPMEQPKKLQGLQE-------------YLADAQEAQPHLDKLIEDVVATCDGCEGRFVGVKSPDSVMRKAER-FHGNMGKVADIARASVVCRTPEDLERAYTVIMARLNPQDVLRVKNGFSSDWMPSGYRDVKVNPVVNGHLCEIQLHLGEFFELKDGQHTVYEWARELRVTTETDPRYLFDDLSSETLEGMIRLAKVNWAGTEHVLPSLQLYTGKYVEAEEAFIKLLAEAEEQMQGAETNSQEWRNSLVNEAEASTKLGLASQLQ------------------------------------GQYSKAAPLLQRSLKIREDVFGKDHPDVARSLQDHADLL 1110
            I+ L  LE+D++    S   S++RDA +NLLKYLQ++ V +++  YDRL F L + G L CLR +I   +    +QPK    LQ+             YL DA+ A+  LD+L++DV    +GCE + V VKS +S  RKA+  + GN+  ++D+AR SV+C  PEDL RA++ I+ RL P +V RV NGF+SDWMPSGYRDVKVNP VN H+CEIQL L +F+ELK  QH VYEWAREL VT + +   LF++LS E  E MIRLA+ NW GT + L  L    G+Y +AEE   K+          +  + ++WR +L+ E+ A   LG A ++Q                                    G++++A PL +RS  IRE V G  HPDVA  L + A LL
Sbjct:    5 IKALRRLEDDLKAGKISATTSVERDAMVNLLKYLQIETVHQFETAYDRLCFELDKDGGLACLR-SIAPIQSADRQQPKVCLELQDGDKEAQLARQVDFYLQDARLAKSGLDELVKDVANEVEGCEAKCVEVKSSESTTRKAKSSYGGNVRMLSDMARVSVICDKPEDLARAFSSILGRLQPHEVRRVTNGFTSDWMPSGYRDVKVNPAVNEHVCEIQLQLRQFYELKHDQHAVYEWARELSVTAKMEAEQLFENLSGEVTEEMIRLAEGNWRGTGYCLVDLLTMAGQYAKAEEGSRKV----------SHLDVKDWREALLQESTARRNLGYALKMQAKFQKSHLVITGPIFGCELFVFGVLKFRSITDTAVQGKHAEAEPLYERSQAIREKVLGPKHPDVAEVLNNRATLL 405          
BLAST of mRNA_E_fasciculatus_S2_contig7529.15691.1 vs.
Match: TPR (repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT0_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 2.240e-84
Identity = 185/383 (48.30%), Postives = 236/383 (61.62%), Query Frame = 1
Query:   52 ELENDMRSDLPSLDRDAKINLLKYLQVQRVQEYQVEYDRLYFTLSRGGNLECLRDNITSARFTPMEQPKKLQ------------GLQEYLADAQEAQPHLDKLIEDVVATCDGCEGRFVGVKSPDSVMRKAERFHG-NMGKVADIARASVVCRTPEDLERAYTVIMARLNPQDVLRVKNGFSSDWMPSGYRDVKVNPVVNGHLCEIQLHLGEFFELKDGQHTVYEWARELRVTTETDPRYLFDDLSSETLEGMIRLAKVNWAGTEHVLPSLQLYTGKYVEAEEAFIKLLAEAEEQMQGAET-NSQEWRNSLVNEAEASTK--LGLAS-----------QLQGQYSKAAPLLQRSLKIREDVFGKDHPDVARSLQDHADLLTEQ 1119
            ELEN         DRDAK+NLLK+LQ++ V +++  YD+LY+ L++ G L+CLR+ IT AR   + QPK L+             L  YLADA+ A+ HLD+L+ D+     GC+ +   VKS  S  RKA + +G ++ KVAD+AR SV+C TPE  +RAY  I+      DVLRV NGF+SDWMPSGYRDVKVNPVVN HLCEIQLHL +FF LK  QH VYEWAR+L+VTT      LFD LS +  E MIRLA+ NW GT   LP LQL  G+Y +AE+ F + L+EAE+  +G E  +++E R   +  A+AS    LGL S             +G+Y +A  L QRS  I E   G DHPDVA SL   A LL  Q
Sbjct:   14 ELENSCEECQNPYDRDAKLNLLKFLQIKAVLQFERAYDQLYYELNKDGGLKCLRE-ITPARPKDLLQPKVLELQDCHEDVRFAAQLDFYLADAKLAKNHLDELVADITKGTGGCQVQCAEVKSRASTQRKARKSYGADVRKVADMARVSVICDTPETFKRAYLAIVESFQG-DVLRVANGFNSDWMPSGYRDVKVNPVVNEHLCEIQLHLHDFFTLKSDQHAVYEWARDLKVTTMLRAENLFDFLSRDITEEMIRLAQRNWHGTGRFLPRLQLDAGQYDQAEKGFRQELSEAEDNKRGVEDKDNKESRKKSLRSAKASLGCVLGLKSPGLEHGISRGHHGEGKYEEARALHQRSHSIFEKALGPDHPDVATSLTSLAGLLQSQ 394          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7529.15691.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized5.510e-21587.10protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Kinesin4.330e-9891.30light chain-like protein n=1 Tax=Ectocarpus silicu... [more]
Kinesin2.950e-9746.98light chain-like protein n=1 Tax=Ectocarpus silicu... [more]
Uncharacterized8.610e-9546.98protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.590e-9247.89protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Tetratricopeptide1.210e-8849.00TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosu... [more]
Kinesin2.750e-8749.20light chain-like protein n=1 Tax=Ectocarpus silicu... [more]
Uncharacterized4.650e-8646.40protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.920e-8441.75protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
TPR2.240e-8448.30repeat-containing protein n=1 Tax=Ectocarpus silic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7529contigE_fasciculatus_S2_contig7529:189..6398 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score335.1
Seed ortholog evalue9.3e-89
Seed eggNOG ortholog2880.D7FUD2
Model size2514
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
Exons15
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
Cds size2514
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842414.384109-CDS-E_fasciculatus_S2_contig7529:188..3141696842414.384109-CDS-E_fasciculatus_S2_contig7529:188..314Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7529 189..314 -
1696842414.3999276-CDS-E_fasciculatus_S2_contig7529:649..8021696842414.3999276-CDS-E_fasciculatus_S2_contig7529:649..802Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7529 650..802 -
1696842414.4143574-CDS-E_fasciculatus_S2_contig7529:1176..12841696842414.4143574-CDS-E_fasciculatus_S2_contig7529:1176..1284Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7529 1177..1284 -
1696842414.4295967-CDS-E_fasciculatus_S2_contig7529:1691..18171696842414.4295967-CDS-E_fasciculatus_S2_contig7529:1691..1817Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7529 1692..1817 -
1696842414.441733-CDS-E_fasciculatus_S2_contig7529:1994..21201696842414.441733-CDS-E_fasciculatus_S2_contig7529:1994..2120Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7529 1995..2120 -
1696842414.450967-CDS-E_fasciculatus_S2_contig7529:2293..24191696842414.450967-CDS-E_fasciculatus_S2_contig7529:2293..2419Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7529 2294..2419 -
1696842414.4604757-CDS-E_fasciculatus_S2_contig7529:2733..28591696842414.4604757-CDS-E_fasciculatus_S2_contig7529:2733..2859Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7529 2734..2859 -
1696842414.4763908-CDS-E_fasciculatus_S2_contig7529:3011..31371696842414.4763908-CDS-E_fasciculatus_S2_contig7529:3011..3137Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7529 3012..3137 -
1696842414.486351-CDS-E_fasciculatus_S2_contig7529:3301..34271696842414.486351-CDS-E_fasciculatus_S2_contig7529:3301..3427Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7529 3302..3427 -
1696842414.4957094-CDS-E_fasciculatus_S2_contig7529:3784..39101696842414.4957094-CDS-E_fasciculatus_S2_contig7529:3784..3910Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7529 3785..3910 -
1696842414.5045743-CDS-E_fasciculatus_S2_contig7529:4134..42601696842414.5045743-CDS-E_fasciculatus_S2_contig7529:4134..4260Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7529 4135..4260 -
1696842414.5133011-CDS-E_fasciculatus_S2_contig7529:4570..46961696842414.5133011-CDS-E_fasciculatus_S2_contig7529:4570..4696Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7529 4571..4696 -
1696842414.521857-CDS-E_fasciculatus_S2_contig7529:4794..49141696842414.521857-CDS-E_fasciculatus_S2_contig7529:4794..4914Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7529 4795..4914 -
1696842414.5303974-CDS-E_fasciculatus_S2_contig7529:5118..54691696842414.5303974-CDS-E_fasciculatus_S2_contig7529:5118..5469Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7529 5119..5469 -
1696842414.5387425-CDS-E_fasciculatus_S2_contig7529:5876..63981696842414.5387425-CDS-E_fasciculatus_S2_contig7529:5876..6398Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7529 5877..6398 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7529.15691.1prot_E_fasciculatus_S2_contig7529.15691.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7529 189..6398 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7529.15691.1

>prot_E_fasciculatus_S2_contig7529.15691.1 ID=prot_E_fasciculatus_S2_contig7529.15691.1|Name=mRNA_E_fasciculatus_S2_contig7529.15691.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=838bp
MMMSSSSVCVHSIQELLELENDMRSDLPSLDRDAKINLLKYLQVQRVQEY
QVEYDRLYFTLSRGGNLECLRDNITSARFTPMEQPKKLQGLQEYLADAQE
AQPHLDKLIEDVVATCDGCEGRFVGVKSPDSVMRKAERFHGNMGKVADIA
RASVVCRTPEDLERAYTVIMARLNPQDVLRVKNGFSSDWMPSGYRDVKVN
PVVNGHLCEIQLHLGEFFELKDGQHTVYEWARELRVTTETDPRYLFDDLS
SETLEGMIRLAKVNWAGTEHVLPSLQLYTGKYVEAEEAFIKLLAEAEEQM
QGAETNSQEWRNSLVNEAEASTKLGLASQLQGQYSKAAPLLQRSLKIRED
VFGKDHPDVARSLQDHADLLTEQGKFDQAMPLLTRSTAIRERALGPGHPE
VGASLISTALLLDSQAEYEKAYELHRKAVDIFQHVLSADHPFVAMAHINR
AVALDNQGKYEEADALLGCAQGTLRAAHGSEHPMLVRTENIRAKFLARQG
KYDEAEQVYRETVAKMESVLGCDHPTVAKALASWAAVCSIQGKYKEADEI
LQKALEIFERSVGNSHPSIAAILHNVAKVHEQQDNFAEAGRVYERAQAIM
SATLGENHPSFARTLNNRAMLLQKQGHYAAAKELMLKSVEIFEGALGPSH
PELAEGLDNLAGVLGCQNNYEQANPLYQRALPMLEKAYGPDHEKVTAALN
NWAGLLIQQAKYDEADPLYRRALASDEKNLGGEHPAVAKDLNNLGASHLY
LSQGRNLDEANSLLGRSLAIRQKALGPDHLHVAQTHHNRAGLMYKMGNYE
EADCHYEQCLAIKVRARGPRHPDVAVSLHDWAVMLYMK
back to top

mRNA from alignment at E_fasciculatus_S2_contig7529:189..6398-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7529.15691.1 ID=mRNA_E_fasciculatus_S2_contig7529.15691.1|Name=mRNA_E_fasciculatus_S2_contig7529.15691.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6210bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7529:189..6398- (Ectocarpus fasciculatus EfasUO2)
ATGATGATGAGCAGCAGCTCTGTATGTGTGCATAGTATACAGGAGCTTCT CGAGCTGGAGAACGACATGAGAAGCGATCTACCGTCCCTTGATCGAGATG CCAAGATCAACCTTCTCAAGTATCTCCAAGTCCAGCGGGTGCAAGAGTAC CAGGTGGAGTATGACCGCTTGTACTTCACGCTGAGCCGAGGTGGGAACCT TGAATGCCTGCGGGATAACATCACCTCGGCTCGATTCACGCCCATGGAAC AGCCGAAGAAATTGCAGGGCCTCCAGGAATACCTTGCGGATGCCCAGGAA GCGCAACCGCATCTGGACAAGCTAATTGAGGACGTGGTTGCGACTTGCGA CGGTTGCGAGGGCCGATTTGTTGGCGTCAAGTCACCGGATAGTGTCATGC GCAAGGCGGAAAGGTTCCATGGGAACATGGGGAAAGTTGCCGATATAGCC CGTGCTTCTGTCGTCTGCAGAACACCCGAGGATCTGGAACGAGCCTACAC GGTCATCATGGCCCGCCTTAATGTATGCATACGACAGCGGAATGAAGACG ATTCGCAAGCTCACCCTTTGCATGCATGCGCACATCCAATATAGTTGAGA TTTCTGGTTGGACAGCAAGAAATCCCCAAATCAGATGGTTGCTCCGAATG CGGAGTTCAATTGTTTTCAAAATACGCGAAACGCGACCAGTTGGCGTTGT CCAGTGTCATCTTGTGGTTGTTTCCCGCGTCGGAATCCTGGCAGACTGAT GACATCCACCGTATCGATACTTGTTCGATATCACTACGGATACCACACCA CATGAGGTGGGCATTCGTATACTAGTCGGAAGTGGATGCTGCAAGGCCCA ACAGGTTTGCAACTAACATCGAAAATCACCTGCTTGCACCTGGCTCTATG CTTCTAACGACCACATCCTTTCCCCGCAGCCGCAAGACGTTCTGAGGGTG AAGAACGGCTTCAGCTCTGACTGGATGCCTAGCGGCTATCGGGATGTGAA AGTGAACCCCGTTGTCAATGGTCATCTTTGTGAGATCCAGTTGCACCTTG GCGAGTTCTTCGAGCTCAAGGACGGGCAGCACACGGTGTACGAGTGGGCG CGGGAGCTACGAGTCACTACCGAGACCGATCCTAGATACTTGTTCGACGA CCTCTCCAGCGAAACCCTCGAGGGAATGATCAGGCTGGCCAAGGTGAATT GGGCGGGAACCGAGCACGTCCTCCCATCCCTGCAGCTCTACACCGGGAAA TATGTCGAGGCTGAGGAGGCCTTCATAAAGGTAGAGGCCAAGCGGCTGGA TTCGGGGAATTATTGCGCGCCTTCGCCGTACCTGCTGCCCCCCTCCCGGT CGTTAGTGGATTGAGAGATGCTGGCTTTTGCCCAATACGCAAACCTCAAG GAAATGTGGACGTCTCACGCACGAAACACGCGTGATCGGTTGTTTGCGTT CTTCTCCCACCTCCTCGTTCGTTTGTGGCTAAAGCTTCTCGCCGAAGCGG AAGAACAGATGCAGGGAGCGGAGACTAACAGCCAGGAATGGAGAAACTCC TTGGTGAATGAAGCGGAAGCAAGCACCAAGCTTGGACTCGCGTCTCAGCT GCAGGTACTTTGATACGGCATCTAAATTTTATCCAGCGACAGCCTTGCAC CGCGGGGAGAGCTGAACTGCTGTGCTTCGTTGATGCATCTCTCTCGCCAC AGGGTCAGTATTCGAAGGCAGCTCCACTGCTCCAGCGTTCCTTGAAGATC AGGGAGGATGTGTTCGGCAAAGATCATCCGGATGTGGCACGATCGCTCCA GGACCACGCAGATCTTTTGACGGAGCAGGTGGCGAGATAGACCACGATAT TTCCAAATACTCTCCGGTTTTGAGCCAAAGACCTATATTTGGCCATACGA GCATGAGGACGCGATATAGAAGTTGGTGTTCGCTGGCGGTGGATTCGATC ACCAGAGCCTATCGTTGTTAATGGTAGGCAGGGGTAACATTCTACCCATA TACTCTTATTGCTGAGAAGAAGGTTCGACCTACAGTACGTGCTGCCGAAG CATCAAACTCCGCTAAGAATTGAACTGTCTCGACATTTTGTGTGTACAAA CCTTGGACATTCCGTGTGTCGATGTTCTGCTATTGCAGGGCAAGTTTGAC CAAGCGATGCCGTTGTTGACAAGGTCGACGGCAATCCGCGAACGGGCCCT CGGCCCTGGCCACCCTGAAGTGGGGGCATCGCTCATCAGTACGGCACTCT TGCTAGATAGCCAGGTACGTTGGACAGAATATAACGAGTTGGGTGCTTAT CGTCTGTTCCATATAATATTTGGTTGACCATCACTCTTGCTTTGGCAGCA ACCAATTTGCCTGGTTTGTGCACAAAGTGGAGTGGACACGATCGGCAACC TGAGTTTCTTTTCGTGGGGCTTGTTGAATCGGATGCAGTTGGCAGTTCCC TAATGGCATGCGAAAAATTTCCCTGGGTTCACGCGCAGGCTGAGTACGAG AAAGCCTACGAGCTCCACCGGAAAGCAGTGGACATTTTCCAACATGTACT CAGCGCAGACCATCCCTTCGTCGCTATGGCGCACATCAACCGCGCGGTGG CGCTTGACAATCAGGTGTGTAGAAACTATTTCGCATTTTAATAAAGCATG TTCTGGTGTCTTGTCCTTGTCCCTCGCCGACTTGAACTGGTAGCCCTTGT CCACTACATTATCCGAGGGAAATCTTTGAGAGATGCACATCGAACTCCCG AATAGTGCGGGAAGCTACGCTGAGAGGAAGGCATACGGCCTCTGGAGAAT TTTTCCGCTACAATTAAGCTAGCCTTGCCGGAGAGAATGTTGTCCAAGCA CACCTGTCGTTGTTCGAGGGGGTTGTTGCCGTAGTCGTTTTGCGGCAGAT CATAGCATGCCTTTGCACATCCATCGGTTGCTAATATGCTCGTCCTCCAC GTTTTCGTGTCTTGCCCCTAGGGTAAGTACGAGGAGGCAGACGCCTTGCT TGGTTGCGCGCAAGGCACTTTGCGAGCCGCTCATGGGTCCGAACACCCGA TGCTGGTGCGCACGGAGAACATCAGGGCCAAATTCTTAGCGCGACAGGTG ACAAACCCCGTCCCTAGTATTTGCCCTCCTCCACGCCGTGATCTACACCG TAGCGGAGCCATGGGGGCAAGCCGTCGAAGCCCACAGGTGTCCCAAAATC TACCTTTTCGGTTTCCGCTTCCTGACCGTCGTTTGGCGGGTTTGCTGGCT GCTCTTGGCAGGGCAAGTACGACGAGGCTGAGCAGGTGTATCGGGAAACG GTGGCGAAGATGGAGAGTGTCCTCGGGTGTGACCATCCCACTGTGGCGAA AGCCCTCGCGAGTTGGGCGGCAGTCTGCTCGATCCAGGTATGCTAGATGT CCCAATAGTGTTTGCCTACACGGTTTCGGGTTGCAGTGTTTTGGAGTAAA GGGCTTCAGACTATCGGGGTCAGAACAGTGGAAACTTACGAATGGCTCGC AGAACCGACACCTGTTTATTCGCCCTTCCCTACATACAGGGAAAATACAA AGAAGCCGACGAAATACTGCAGAAGGCGCTGGAGATATTCGAGAGGAGTG TCGGCAACAGCCACCCGAGTATCGCCGCTATACTCCACAACGTCGCCAAA GTACACGAGCAGCAGGTGATACCCAACGCAACGATTAAGTTGGAATGGCA AAGGGTTGCAACATGTCTGAAACTGGCCCGATTGTGGGCTGCTAAGGCAG CCAACCGGCGATTTGGTAACATAATTTTGGCCCTTAGCGTGGCTATAGTA GTTTTTTCAGGTGTATGGAAATTGGTAAGTCGTTGCCCGTTGTAGGCAGA CGGAAGTATACACAAACAATCACAATTTTTTTTCATCATATCACCTGAAC ATGGTGGCTTGTACCCACATATGTCCATTCTCTTGATCCGAACCTAGAGC CCATGTTCTGATTCTGTGCGTGCTAAAAGGACAACTTTGCGGAAGCTGGG CGTGTTTATGAACGGGCGCAAGCCATCATGAGTGCTACACTAGGGGAGAA CCACCCTTCGTTTGCACGGACACTCAACAATCGAGCGATGCTACTTCAAA AGCAGGTGAGTGCGACGAGCTTGCTCCGCGTTCCAGCCATGTCTCGGACG CGGGTGCGAACGTCATGCGTATATGCCTGCTATCGATTGGTGCGTCTTTT TTCAGCTGCTCACTCCTGGAAAATGTCGCATGTTCCGATTGCTGTCCCCT TTGCGTACTATGCACATAACGGCTGAAGGGCCACTACGCCGCAGCGAAAG AGTTGATGTTGAAGTCCGTGGAGATTTTCGAAGGAGCTCTCGGGCCAAGT CACCCAGAGCTTGCTGAAGGACTCGACAACCTTGCTGGTGTACTAGGATG TCAGGTGAAAATGATGCACATATCTGGGGTGATGCTCGATCTTTCGTATA CTCATATGATAGCAGTGGTGGTGCTTTGTGCTCGGGTTTGCCGGGCTTTA TGCTCACCGAGAATTACTCACACGCGTGCTCGCCCGTAACCCGGCGTCAC GACTAGTCTTTTCTCGTCGCTACGTACGAAGAACAACTACGAGCAGGCAA ATCCTCTGTACCAGCGGGCTCTCCCAATGCTTGAGAAGGCTTACGGGCCG GACCACGAGAAAGTGACTGCCGCGCTCAACAACTGGGCCGGGCTGTTGAT ACAACAGGTGAAACACGTTCCACGGACTTGGAGCATTGGCAACTGGTTTC AAGCTTGCGTTTGGTAGGAGGATGACTTGTAAGAGAATCACAGGGCGCCT CGGAGTTATTTTGCGCGTAAAGGGCGCAAAAAGATGCTCTTCGTTAGTTA CGAGGAAAAGATGCTGCTAAACCGCGTTGACACTGCACTTGGTGGTATTA CTATTCCTGGGGACCGTGTGCTACGACGGCTGAGGGGGATGTTCTTGGAA CTAAATTCGGGCGAAAAGTTCCTGGTCATCCTAGCTCTGTGGGGTGCTGT GGGCGAATATTGAAACGCTAGAATGGCTATAGGTTGGCAACACCGCAACG GCTGCTCTAAATACGCGCCGCACTCGTGCACCGCGACCTCCCTCTCTTTG TTCCCGTGAACAAGGCAAAGTACGACGAGGCGGACCCTTTGTATCGCCGC GCCCTCGCCAGCGATGAGAAAAATCTCGGCGGCGAGCATCCGGCTGTCGC GAAGGATCTAAACAACCTAGGAGTCTCAATGACAAAGCAGGCGAGAAGGT GTACCATGGCTTAGTGATTTCCTTGATCCGTCGGTATGGACAGATACTGC ATCGCCGTTGAACTCCAGTGGTGGTTTGTTCACGACACTCTTTTAGAATG CGATTTATTGGTGCTTGGCCGAATACCAATGATGGGGAGTGAACGCTGAG GCCGAACCAGTTGTCCTCCGCCTACAATAGAGATGCCCTCAGAATGAAAA CGCATTTACCAGTTCTGTGCTTCCGCGGGAAGAGGTTGCCGCAGCACCGC CGAAGTATTCATGTACTCGACACTGCTGCATATTGGACAGAGCGAAAAAC GTTTTCGACTCTGCTCTCGGAATCAAATCTCATGTGTCTTACGCAGGCTT CTCACCTCTACCTATCGCAGGGTCGTAATCTCGACGAAGCAAACTCTCTT TTGGGGCGATCCCTGGCAATCCGGCAAAAGGCTCTTGGACCAGACCATCT ACATGTGGCTCAGACACATCACAACCGAGCAGGTCTCATGTACAAAATGG TGAGTGGAGGGTGACGACGAAATATGCCATGAGGAGAAACCTGGCAATAG GTGACAAAGGCGAACTGCTTGTGTTTTGTCCTTTTCATGTTTTGTGTGAT TCGCGCACAGCACAGTTTAGTACACTACAATATTGCTTGCGTGGTGCGTG TGAGTGCTTCGCGAACATCTATTCGATTTTTTAATGAGTTCCCGTTCTCA TGCTTGCAGTTTAGACTGCAGATGCTACGAGTGGTTGAGGCTACGCGCCT CTCTTCGTCGTGCTCCGATCCCGCCACTGGCTGGCAAAGTTTGTCATATG AGACATCAGACGTTCGCGTCGTGGTGCCTTACAGGGTAATTATGAGGAGG CAGACTGTCACTATGAGCAGTGTCTGGCGATAAAAGTGCGGGCTCGGGGG CCACGACATCCCGATGTTGCCGTTTCGCTGCACGACTGGGCGGTCATGCT GTACATGAAG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7529:189..6398-

>mRNA_E_fasciculatus_S2_contig7529.15691.1 ID=mRNA_E_fasciculatus_S2_contig7529.15691.1|Name=mRNA_E_fasciculatus_S2_contig7529.15691.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2514bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7529:189..6398- (Ectocarpus fasciculatus EfasUO2)
ATGATGATGAGCAGCAGCTCTGTATGTGTGCATAGTATACAGGAGCTTCT
CGAGCTGGAGAACGACATGAGAAGCGATCTACCGTCCCTTGATCGAGATG
CCAAGATCAACCTTCTCAAGTATCTCCAAGTCCAGCGGGTGCAAGAGTAC
CAGGTGGAGTATGACCGCTTGTACTTCACGCTGAGCCGAGGTGGGAACCT
TGAATGCCTGCGGGATAACATCACCTCGGCTCGATTCACGCCCATGGAAC
AGCCGAAGAAATTGCAGGGCCTCCAGGAATACCTTGCGGATGCCCAGGAA
GCGCAACCGCATCTGGACAAGCTAATTGAGGACGTGGTTGCGACTTGCGA
CGGTTGCGAGGGCCGATTTGTTGGCGTCAAGTCACCGGATAGTGTCATGC
GCAAGGCGGAAAGGTTCCATGGGAACATGGGGAAAGTTGCCGATATAGCC
CGTGCTTCTGTCGTCTGCAGAACACCCGAGGATCTGGAACGAGCCTACAC
GGTCATCATGGCCCGCCTTAATCCGCAAGACGTTCTGAGGGTGAAGAACG
GCTTCAGCTCTGACTGGATGCCTAGCGGCTATCGGGATGTGAAAGTGAAC
CCCGTTGTCAATGGTCATCTTTGTGAGATCCAGTTGCACCTTGGCGAGTT
CTTCGAGCTCAAGGACGGGCAGCACACGGTGTACGAGTGGGCGCGGGAGC
TACGAGTCACTACCGAGACCGATCCTAGATACTTGTTCGACGACCTCTCC
AGCGAAACCCTCGAGGGAATGATCAGGCTGGCCAAGGTGAATTGGGCGGG
AACCGAGCACGTCCTCCCATCCCTGCAGCTCTACACCGGGAAATATGTCG
AGGCTGAGGAGGCCTTCATAAAGCTTCTCGCCGAAGCGGAAGAACAGATG
CAGGGAGCGGAGACTAACAGCCAGGAATGGAGAAACTCCTTGGTGAATGA
AGCGGAAGCAAGCACCAAGCTTGGACTCGCGTCTCAGCTGCAGGGTCAGT
ATTCGAAGGCAGCTCCACTGCTCCAGCGTTCCTTGAAGATCAGGGAGGAT
GTGTTCGGCAAAGATCATCCGGATGTGGCACGATCGCTCCAGGACCACGC
AGATCTTTTGACGGAGCAGGGCAAGTTTGACCAAGCGATGCCGTTGTTGA
CAAGGTCGACGGCAATCCGCGAACGGGCCCTCGGCCCTGGCCACCCTGAA
GTGGGGGCATCGCTCATCAGTACGGCACTCTTGCTAGATAGCCAGGCTGA
GTACGAGAAAGCCTACGAGCTCCACCGGAAAGCAGTGGACATTTTCCAAC
ATGTACTCAGCGCAGACCATCCCTTCGTCGCTATGGCGCACATCAACCGC
GCGGTGGCGCTTGACAATCAGGGTAAGTACGAGGAGGCAGACGCCTTGCT
TGGTTGCGCGCAAGGCACTTTGCGAGCCGCTCATGGGTCCGAACACCCGA
TGCTGGTGCGCACGGAGAACATCAGGGCCAAATTCTTAGCGCGACAGGGC
AAGTACGACGAGGCTGAGCAGGTGTATCGGGAAACGGTGGCGAAGATGGA
GAGTGTCCTCGGGTGTGACCATCCCACTGTGGCGAAAGCCCTCGCGAGTT
GGGCGGCAGTCTGCTCGATCCAGGGAAAATACAAAGAAGCCGACGAAATA
CTGCAGAAGGCGCTGGAGATATTCGAGAGGAGTGTCGGCAACAGCCACCC
GAGTATCGCCGCTATACTCCACAACGTCGCCAAAGTACACGAGCAGCAGG
ACAACTTTGCGGAAGCTGGGCGTGTTTATGAACGGGCGCAAGCCATCATG
AGTGCTACACTAGGGGAGAACCACCCTTCGTTTGCACGGACACTCAACAA
TCGAGCGATGCTACTTCAAAAGCAGGGCCACTACGCCGCAGCGAAAGAGT
TGATGTTGAAGTCCGTGGAGATTTTCGAAGGAGCTCTCGGGCCAAGTCAC
CCAGAGCTTGCTGAAGGACTCGACAACCTTGCTGGTGTACTAGGATGTCA
GAACAACTACGAGCAGGCAAATCCTCTGTACCAGCGGGCTCTCCCAATGC
TTGAGAAGGCTTACGGGCCGGACCACGAGAAAGTGACTGCCGCGCTCAAC
AACTGGGCCGGGCTGTTGATACAACAGGCAAAGTACGACGAGGCGGACCC
TTTGTATCGCCGCGCCCTCGCCAGCGATGAGAAAAATCTCGGCGGCGAGC
ATCCGGCTGTCGCGAAGGATCTAAACAACCTAGGAGCTTCTCACCTCTAC
CTATCGCAGGGTCGTAATCTCGACGAAGCAAACTCTCTTTTGGGGCGATC
CCTGGCAATCCGGCAAAAGGCTCTTGGACCAGACCATCTACATGTGGCTC
AGACACATCACAACCGAGCAGGTCTCATGTACAAAATGGGTAATTATGAG
GAGGCAGACTGTCACTATGAGCAGTGTCTGGCGATAAAAGTGCGGGCTCG
GGGGCCACGACATCCCGATGTTGCCGTTTCGCTGCACGACTGGGCGGTCA
TGCTGTACATGAAG
back to top