mRNA_E_fasciculatus_S2_contig7518.15679.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7518.15679.1 vs.
Match: VOC (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0L5_9PHAE) HSP 1 Score: 339 bits (870), Expect = 3.940e-114 Identity = 184/204 (90.20%), Postives = 187/204 (91.67%), Query Frame = 1
Query: 1 MRRHLPAIGALSLATGAVGFLSTSLLPRSSSSSKLAGRRHHDLCRMCASSADDAQQEGVGASQALTREGWLKATTAAAALGVGIAVSPGSSTAADGGTPKGLPASGYFVQHAVFKVPDMDEEVKFFTEGLGMKVVRQREVNGARNVFVAYGDESLQTKDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTLDSTLATIAYKVDAA 612
MRR L IG+LSLATG VGFLSTSLLPR S KLAGR HHDLCRMCA S+D QEG+GAS ALTREGWLKATTAAAALGVGIAVSPGSSTAADGG PKGLPASGYFVQHAVFKVPDMDEEVKFFTEGLGMKVVRQREVNG RNVFVAYGDESLQTKDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTL STLATIAYKVDAA
Sbjct: 1 MRRQL-LIGSLSLATGTVGFLSTSLLPRPPS--KLAGR-HHDLCRMCAPSSD--AQEGLGASPALTREGWLKATTAAAALGVGIAVSPGSSTAADGGAPKGLPASGYFVQHAVFKVPDMDEEVKFFTEGLGMKVVRQREVNGVRNVFVAYGDESLQTKDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTLSSTLATIAYKVDAA 198
BLAST of mRNA_E_fasciculatus_S2_contig7518.15679.1 vs.
Match: Metal (ion binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V5_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.230e-27 Identity = 62/141 (43.97%), Postives = 85/141 (60.28%), Query Frame = 1
Query: 193 LTREGWLKATTAAAALGVGIAVSPG-SSTAADGGTPKGLPASGYFVQHAVFKVPDMDEEVKFFTEGLGMKVVRQREVNGARNVFVAYGDESLQTKDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTLDSTLATIAYKVDAA 612
++R WL A+ +G+ P + AA +GLPASG+F+QHAV KV D+ +KF+ EGLGMK+VR+R ++ R VF+AYG E+L + DGGYF+LEL K P Y G F+YLGLTL T+ + A
Sbjct: 8 VSRRAWLTTAAVGPAIALGVGAQPVLAKQAAVAQGVQGLPASGFFIQHAVLKVNDLSANIKFWCEGLGMKLVRERTIDNVRTVFLAYGKETLSSGDGGYFALELTQAQK--PVYGVGSSFKYLGLTLPDKPMTLGIRATDA 146
BLAST of mRNA_E_fasciculatus_S2_contig7518.15679.1 vs.
Match: VOC (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIX3_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 8.300e-14 Identity = 71/201 (35.32%), Postives = 93/201 (46.27%), Query Frame = 1
Query: 85 SSSSSKLAGRRHHDLCRMCASSADDAQQEGVGASQALTREGWLKATTAAAALGVGIAVSPGSSTAADGGTPKGLPASGYFVQHAVFKVPDMDEEVKFFTEGLGMKVVRQREVNGARN--VFVAYGDESLQT-KD-----------GGYFSLELVYDPKAPPG------YSTGGPFQYLGLTLDSTLATIAYKVDAAVSFGW 627
SSSS+ + +R H SS D++ G GA +A A L +A SP A G P+ L + FVQHAV VPD++ ++F+TEGLGM+VVR R A FVAYG E L KD GG+FSLELV P PP Y G QY+ + +D+ + V FG+
Sbjct: 34 SSSSAGIQSKRQHPCTLGSQSSNDESSLAGAGAXXXXXXXFXXXXASACAVL---VAGSPEGCNAI-GELPETL-SQKRFVQHAVVNVPDIEAAIRFYTEGLGMRVVRSRADTSANTNTTFVAYGPEQLTVPKDWAPGVSSFAAYGGHFSLELV-GPLNPPADGELPFYDPGNGVQYIQIAVDTYRISKVIAAGGEVIFGY 228
BLAST of mRNA_E_fasciculatus_S2_contig7518.15679.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4N634_HEMAN) HSP 1 Score: 79.0 bits (193), Expect = 1.420e-13 Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 322 FVQHAVFKVPDMDEEVKFFTEGLGMKVVRQREVNGARNVFVAYGDESLQTKDGGYFSLELVYDPKA 519
FVQHAV K D+DEEV F+T+GLGMKV+R R+V G FV YG E+L+ GG+ SLE+V KA
Sbjct: 122 FVQHAVIKAVDVDEEVDFWTQGLGMKVLRTRKVGGRETKFVGYGPETLRNNRGGHVSLEIVQSSKA 187
BLAST of mRNA_E_fasciculatus_S2_contig7518.15679.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U7W2_HEMAN) HSP 1 Score: 74.7 bits (182), Expect = 1.410e-12 Identity = 44/107 (41.12%), Postives = 57/107 (53.27%), Query Frame = 1
Query: 298 KGLPASGYFVQHAVFKVPDMDEEVKFFTEGLGMKVVRQREVNGARNVFVAYGDESLQTKDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTLDSTLATIAYKVDAAVS 618
KG + VQHAV D+D+EV F+T GLGM+ +R R V G FV YG ESL + GG+FSLE+ P+ + G Q+L L L + I DA S
Sbjct: 104 KGALEAPGLVQHAVILAKDLDDEVDFWTNGLGMRELRSRTVKGVTTRFVGYGPESLTSPIGGHFSLEITEGPRK---FDIGTGLQHLNLVLPPSTDRILKVEDAGGS 207
BLAST of mRNA_E_fasciculatus_S2_contig7518.15679.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W5Z1_9CRYP) HSP 1 Score: 71.2 bits (173), Expect = 2.940e-11 Identity = 42/98 (42.86%), Postives = 54/98 (55.10%), Query Frame = 1
Query: 325 VQHAVFKVPDMDEEVKFFTEGLGMKVVRQREVNGARNVFVAYGDESLQTKDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTLDSTLATIAYKVDAAVS 618
VQHAV D+D+EV+F+T+GLGMK +R R V G FV YG ES + GG+FSLE+ P+ G Q+L L L + I DA S
Sbjct: 105 VQHAVILAKDLDDEVEFWTKGLGMKELRSRTVKGVVTRFVGYGPESPASPVGGHFSLEITEGPRKA---DIGTGLQHLDLVLPPSTDRILKVEDAGGS 199
BLAST of mRNA_E_fasciculatus_S2_contig7518.15679.1 vs.
Match: Putative (glyoxalase n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYG2_9CHLO) HSP 1 Score: 68.9 bits (167), Expect = 4.110e-10 Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = 1
Query: 322 FVQHAVFKVPDMDEEVKFFTEGLGMKVVRQREVNGARNVFVAYGDESLQTKDGGYFSLELVYDPKAPPGYSTGGPFQY 555
F+QHAV +V D+D+ VKF+T+GLGMKV R R FV++G E+L DGG F+LELV +P S G FQ+
Sbjct: 154 FLQHAVLEVKDLDKSVKFWTQGLGMKVNRTR----GNQAFVSFGPETLTAADGGKFALELVENPSTTQDNS-GQFFQF 226
BLAST of mRNA_E_fasciculatus_S2_contig7518.15679.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VVD7_9CRYP) HSP 1 Score: 68.9 bits (167), Expect = 4.210e-10 Identity = 35/73 (47.95%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 322 FVQHAVFKVPDMDEEVKFFTEGLGMKVVRQREVNGARNVFVAYGDESLQTKDGGYFSLELVYDPKAPPGYSTG 540
F+QHAV K ++D EV F+TEGLGMKV+R R+V G FV YG E+L GG+ SLE+V + +G
Sbjct: 125 FLQHAVIKAVNVDLEVAFWTEGLGMKVLRTRKVGGRVTKFVGYGKETLLDNRGGHVSLEIVQSSRGRVDVGSG 197
BLAST of mRNA_E_fasciculatus_S2_contig7518.15679.1 vs.
Match: Lactoylglutathione (lyase n=2 Tax=Trifolieae TaxID=163742 RepID=A0A2Z6LJV4_TRISU) HSP 1 Score: 62.4 bits (150), Expect = 5.260e-8 Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 1
Query: 331 HAVFKVPDMDEEVKFFTEGLGMKVVRQREVNGAR--NVFVAYGDESLQTKDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTLDSTLATIAYKVDAAVSFGWLV 633
H V++V D+D+ +KF+TEGLGMKV+R+R+ R N F+ YG E +FS+EL Y+ Y G F + G+ +D I+ VD + G ++
Sbjct: 89 HVVYRVGDLDKSIKFYTEGLGMKVLRKRDRTEERYTNAFLGYGQEDA------HFSIELTYNYGIET-YDIGTGFGHFGIAMDD----ISRVVDIVRAKGGII 180
BLAST of mRNA_E_fasciculatus_S2_contig7518.15679.1 vs.
Match: Lactoylglutathione (lyase (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392NHN5_9FABA) HSP 1 Score: 60.1 bits (144), Expect = 5.710e-8 Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 1
Query: 331 HAVFKVPDMDEEVKFFTEGLGMKVVRQREVNGAR--NVFVAYGDESLQTKDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTLD 573
H V++V D+D+ +KF+TEGLGMKV+R+R+ R N F+ YG E +FS+EL Y+ Y G F + G+ +D
Sbjct: 52 HVVYRVGDLDKSLKFYTEGLGMKVLRKRDRTEERYMNAFLGYGPEDS------HFSIELTYNYGIET-YDIGTGFGHFGIAMD 127 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7518.15679.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7518.15679.1 >prot_E_fasciculatus_S2_contig7518.15679.1 ID=prot_E_fasciculatus_S2_contig7518.15679.1|Name=mRNA_E_fasciculatus_S2_contig7518.15679.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=213bp MRRHLPAIGALSLATGAVGFLSTSLLPRSSSSSKLAGRRHHDLCRMCASSback to top mRNA from alignment at E_fasciculatus_S2_contig7518:105..4206- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7518.15679.1 ID=mRNA_E_fasciculatus_S2_contig7518.15679.1|Name=mRNA_E_fasciculatus_S2_contig7518.15679.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4102bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7518:105..4206- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7518:105..4206- >mRNA_E_fasciculatus_S2_contig7518.15679.1 ID=mRNA_E_fasciculatus_S2_contig7518.15679.1|Name=mRNA_E_fasciculatus_S2_contig7518.15679.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=639bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7518:105..4206- (Ectocarpus fasciculatus EfasUO2)back to top |