mRNA_E_fasciculatus_S2_contig750.15664.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig750.15664.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW7_ECTSI) HSP 1 Score: 352 bits (904), Expect = 4.830e-122 Identity = 189/203 (93.10%), Postives = 196/203 (96.55%), Query Frame = 1
Query: 1 MKAKAVLLSLWAILLFSGLPACTGKRAAKDWSKMDLDELEKQWEDGDEEEELKTEEQAKFENLERRRKQAQANAGKFDPSSLGSMTAAQVGAMAAGQKDATGPTMLFAQVGSGGLGETGGSGDDDGPISKEETEKVGGRLQQLAQLGSLEVSVYALDAGSVLVSSQRGWEGKEILDFLLSRPEVFKVTWNSRDFYPPKEGEEE 609
MKAKAVLLSL +LLFSGLPAC GKR+AKDWSKMDL+ELEKQWEDGDE+EELKTEEQAKFENLERRRKQAQANAGKFDPSSLGSMTAAQVGAMAAGQKDATGPTMLFAQV SGGLGETGGSGD+ G ISKEETEKVGGRLQQLAQLGSLEVSVYALDAGSVLVSSQRGWEG++ILDFLLSRPEV KVTWNSRDFYPPKEGEEE
Sbjct: 1 MKAKAVLLSLGTMLLFSGLPACMGKRSAKDWSKMDLNELEKQWEDGDEDEELKTEEQAKFENLERRRKQAQANAGKFDPSSLGSMTAAQVGAMAAGQKDATGPTMLFAQVRSGGLGETGGSGDNGGSISKEETEKVGGRLQQLAQLGSLEVSVYALDAGSVLVSSQRGWEGQQILDFLLSRPEVSKVTWNSRDFYPPKEGEEE 203
BLAST of mRNA_E_fasciculatus_S2_contig750.15664.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHB1_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 6.740e-19 Identity = 62/193 (32.12%), Postives = 105/193 (54.40%), Query Frame = 1
Query: 10 KAVLLSLWAILLFSGLPACTGKRAAKDWSKMDLDELEKQWEDGDEEEELKTEEQAKFENLERRRKQAQANAGKFDPSSLGSMTAAQVGAMAAGQKDATGPTMLFAQVGSGGLGETGGSGDDDGPISKEETEKVGGRLQQLAQLGSLEVSVYALDAGSVLVSSQRGWEGKEILDFLLSRPEVFKVTWNSRDFYP 588
+AV+L+L A+L A R++KDW K+D D LE++W+ GDEE+EL T+++ F ++RRR+Q D +L Q+ GPTM+F ++ +G ++EE + G + L G L V+ + ++ VL S Q+GW+G ++ +FLL++ +V KVTW+++D+ P
Sbjct: 5 EAVVLALLALL------ALAWGRSSKDWGKVDFDALEEEWKYGDEEDELITDDELLFREMQRRREQG------IDIKNLDVERVKH-------QQSMAGPTMMFIELRP-----------REGGYAEEELYNITGIWKDLMYTGGLTVTFFNIENDKVLCSMQKGWDGIQVKEFLLTQSQVAKVTWDNQDYVP 167
BLAST of mRNA_E_fasciculatus_S2_contig750.15664.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G5Y1_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 1.290e-10 Identity = 57/186 (30.65%), Postives = 87/186 (46.77%), Query Frame = 1
Query: 34 AILLFSGLPACTGKRAAKDWSKM---DLDELEKQWEDGDEEEELKTEEQAKFENLERRRKQAQANAGKFDPSSLGSMTAAQVGAMAAGQKDATGPTMLFAQVGSGGLGETGGSGDDDGPISKEETEKVGGRLQQLAQLGSLEVSVYALDAGSVLVSSQRGWEGKEILDFLLSRPEVFKVTWNSRDF 582
A L PA GK +DWSK D + ++ W +GDEEEEL TE++ + +E RR A A P L M + + + A GPTM+FA + T + P + +E ++ + + L + V+ Y + VL + Q GW G E+L FLL +P+ +V WN +
Sbjct: 29 ACALLCATPALAGK--PRDWSKFRESDWEAVDNDWREGDEEEELVTEDELEVRRMEARR----AAAPNVSPEQLEVMPTEALEYIKQSEAQA-GPTMMFAAL-------TDVNAATGKPWTDDERNELAFQWRDLLATNGVTVTCYDIGDNRVLTTLQHGWRGFELLRFLLDQPDATEVEWNQHTY 200
BLAST of mRNA_E_fasciculatus_S2_contig750.15664.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L517_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 8.370e-7 Identity = 43/162 (26.54%), Postives = 79/162 (48.77%), Query Frame = 1
Query: 88 DWSKMDLDELEKQWEDGDEEEELKTEEQAKFENLERRRKQAQANAGKFDPS-SLGSMTAAQVGAMAAGQKDATGPTMLFAQVGSGGLGETGGSGDDDGPISKEETEKVGGRLQQLAQLGSLEVSVYALDAGSVLVSSQRGWEGKEILDFLLSRPEVFKVTWN 570
DWS DL+ELE+QWE+GD+ +L + + +E+ ++ ++ F G + + M +A P M+F ++ S E + V Q +++ + ++ Y +++ ++V+ +GW GKE+ FLL+R EV +VTWN
Sbjct: 26 DWSNQDLEELERQWEEGDDPGDLIAPDDEFHKLVEKVQESSRRKLEYFRKGYDTGKYSRQTLEKMETEYSNAGKPAMIFVKLRS----------------EFTEVDGVSTFCQSWSEMIAHDIKCYPIESNDLMVTVAKGWVGKEVHKFLLTRTEVLEVTWN 171
BLAST of mRNA_E_fasciculatus_S2_contig750.15664.1 vs.
Match: Arf-GAP (with GTPase, ANK repeat and PH domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJ56_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 1.970e-6 Identity = 31/88 (35.23%), Postives = 48/88 (54.55%), Query Frame = 1
Query: 304 GPTMLFAQVGSGGLGETGGSGDDDGPISKEETEKVGGRLQQLAQLGSLEVSVYALDAGSVLVSSQRGWEGKEILDFLLSRPEVFKVTW 567
G TM+F Q+ G + ++ET G RL++LA+ G ++VSVY L+ G ++V+ Q+GW I D + +PEV V W
Sbjct: 94 GATMMFVQL--------------RGKLDEQETIGFGDRLKRLAKTGGVDVSVYKLEPGKLVVTLQKGWVATGIYDLISDQPEVDNVHW 167
BLAST of mRNA_E_fasciculatus_S2_contig750.15664.1 vs.
Match: Uncharacterized (protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SP59_9ARCH) HSP 1 Score: 52.8 bits (125), Expect = 4.170e-5 Identity = 48/175 (27.43%), Postives = 86/175 (49.14%), Query Frame = 1
Query: 85 KDWSKMDLDELEKQWEDGDEEEELKTEEQAKFENLERRRKQAQANAGKFDPSSLGSMTAAQVGAMAAGQKD----ATGPTMLFAQVGSGGLGETGGSGDDDGPISKEETEKVGGRLQQLAQLGSLEVSVYALDAGSVLVSSQRGWEGKEILDFLLSRPEVFKVTWNSRDFYPPKE 597
K+W+K+D ++L+KQWE GD++EEL+ + FE++ + +++ + D ++ + A Q+D + G M+F + D K TE + R L + G + +VY +D +L++ + W+ K++L FL + EV T NS+ Y PKE
Sbjct: 22 KNWNKIDYNDLDKQWESGDDQEELEHD----FEHIRKIQEKKRPKLNMEDGHAIRN----------AYQQDPFLFSGGGMMVFVDLKP--------KQPDGKEWDKRSTELLSKRYSTLLRSGGVVGTVYNIDEKRLLINVDKSWQTKDMLTFLAKQAEVESFTANSKT-YSPKE 173 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig750.15664.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig750.15664.1 >prot_E_fasciculatus_S2_contig750.15664.1 ID=prot_E_fasciculatus_S2_contig750.15664.1|Name=mRNA_E_fasciculatus_S2_contig750.15664.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=205bp MKAKAVLLSLWAILLFSGLPACTGKRAAKDWSKMDLDELEKQWEDGDEEEback to top mRNA from alignment at E_fasciculatus_S2_contig750:4694..9243- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig750.15664.1 ID=mRNA_E_fasciculatus_S2_contig750.15664.1|Name=mRNA_E_fasciculatus_S2_contig750.15664.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4550bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig750:4694..9243- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig750:4694..9243- >mRNA_E_fasciculatus_S2_contig750.15664.1 ID=mRNA_E_fasciculatus_S2_contig750.15664.1|Name=mRNA_E_fasciculatus_S2_contig750.15664.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=615bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig750:4694..9243- (Ectocarpus fasciculatus EfasUO2)back to top |