mRNA_E_fasciculatus_S2_contig75.15661.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig75.15661.1 vs.
Match: Uncharacterized (protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FL08_ECTSI) HSP 1 Score: 379 bits (973), Expect = 1.750e-126 Identity = 195/213 (91.55%), Postives = 204/213 (95.77%), Query Frame = 1
Query: 1 MATSAPASGSGVEVKHVTISPASSNDKLEFTRNFEQVFKPSSSLRGAFEHHAAYKAIFRTEEGRGFRSREPNTTKLPGKIVATSRTTQQTGLTRVPKGLISAIINAYNTHCALVLSPDDVWLTILSQFCAYVNKNAEGLRDRVVEHEGKKKLTVYGYGSLETADYEKVIKDLLGEIRKNIKSPELADWFRPGFSTTTETDEVCAAATAMASLK 639
MATSAPASG+GVEVKHVTISPASSN KLEFTRNFEQVFKPSSSLRGAFEHHAAYKAIFRTEEGRGFRSREP+TTKLPGKIVATSRTTQQTGL+R KGLISAI+ AYNTHCAL +SPDDVWLTILSQFCAYVNKNAEGLRDRVVEHEGKK LTV GYGSLETADY K+IKDLLG+IR+NIKSPELADWFRPGFSTTTETDEVCAAA AMASL+
Sbjct: 1 MATSAPASGTGVEVKHVTISPASSNPKLEFTRNFEQVFKPSSSLRGAFEHHAAYKAIFRTEEGRGFRSREPDTTKLPGKIVATSRTTQQTGLSRASKGLISAIMTAYNTHCALEVSPDDVWLTILSQFCAYVNKNAEGLRDRVVEHEGKKGLTVEGYGSLETADYAKLIKDLLGQIRQNIKSPELADWFRPGFSTTTETDEVCAAAAAMASLQ 213
BLAST of mRNA_E_fasciculatus_S2_contig75.15661.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K056_9PHAE) HSP 1 Score: 322 bits (824), Expect = 1.670e-104 Identity = 147/184 (79.89%), Postives = 163/184 (88.59%), Query Frame = 3
Query: 636 QAYFEYGICLACGIPSVTMMGTVEDWKLLREKIERLLEFEVQDNPEGNVMELWVGYLRKVCDGFVESAEHPDSAATVDFWDKVYPPLGGGSGVTYTTGWVSTFSCFDKEGKFMGKNTSRGGEFPLITSLCHNVVSCPVAIDDNGHEHDATLFTGQVALKAERGAEGGHPTIRPRNDWCLAVAVK 1187
Q YF Y +CL CGIPSV +MGTVEDWKLLREKIER+LEFEV DNPEG VMELWVGYLRKVCDGFVESAEHP+SAATVDFWDKV+ SGVT+TTGWVS FSCFDK+G F+GKNT +GGEFPL+TSLCHNVVSCPVAIDDNG+ +DATL TGQVA +AERGA+ G+PT+ PRNDWCLAVAVK
Sbjct: 177 QEYFNYEMCLRCGIPSVALMGTVEDWKLLREKIERMLEFEVLDNPEGKVMELWVGYLRKVCDGFVESAEHPNSAATVDFWDKVFSHRHFVSGVTFTTGWVSAFSCFDKDGNFIGKNTGKGGEFPLVTSLCHNVVSCPVAIDDNGYGYDATLVTGQVAYRAERGAKAGYPTMCPRNDWCLAVAVK 360
BLAST of mRNA_E_fasciculatus_S2_contig75.15661.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ8_9PHAE) HSP 1 Score: 298 bits (762), Expect = 3.750e-95 Identity = 166/220 (75.45%), Postives = 176/220 (80.00%), Query Frame = 1
Query: 1 MATSAPASGSGVEVKHVTISPASSNDKLEFTRNFEQVFKPSSSLRGAFEHHAAYKAIFRTEE-GRGFRSREPNTTKLPGKIVATSRTTQQTGLTRVPKGLISAIINAYNTHCALVLSPDDVWLTILSQFCAYVNKNAEGLRDRVVEHEGKKKLTVYGYGSLETADYEKVIKDLLGEIRKNIKSPELADWFRPGFSTTTETDEVCAAATAMASLKRTSSME 657
MATSAPASG GVEVK Q FKPSSSL GAFEHH AYKAIFRTEE G F SR P+TT LPGKIVA SRTT QTGL+R P GLISAI+ AYNTHCALV+SPDDVWLTILSQFCAYVNKNAEGLRDRVVEHEGKKKLTVYGYGSLETADY ++IKDLLG+IR+NIKSPEL F PGFSTTTETDEVCAAATAMASL+ + E
Sbjct: 1 MATSAPASGRGVEVK--------------------QAFKPSSSLSGAFEHHVAYKAIFRTEEDGTQFISRRPDTTNLPGKIVAISRTTHQTGLSRAPMGLISAIMTAYNTHCALVVSPDDVWLTILSQFCAYVNKNAEGLRDRVVEHEGKKKLTVYGYGSLETADYARLIKDLLGQIRQNIKSPEL---FLPGFSTTTETDEVCAAATAMASLQECFNYE 197
BLAST of mRNA_E_fasciculatus_S2_contig75.15661.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F2_ECTSI) HSP 1 Score: 287 bits (734), Expect = 1.500e-88 Identity = 134/202 (66.34%), Postives = 157/202 (77.72%), Query Frame = 3
Query: 636 QAYFEYGICLACGIPSVTMMGTVEDWKLLREKIERLLEFEVQDNPEGNVMELWVGYLRKVCDGFVESAEHPDSAATVDFWDKVYPPLGGGSGVTYTTGWVSTFSCFDKEGKFMGKNTSRGG----------------EFPLI--TSLCHNVVSCPVAIDDNGHEHDATLFTGQVALKAERGAEGGHPTIRPRNDWCLAVAVK 1187
QAYF Y I CG+PSVT+MGTV+DWKLLR K+ERLL+FEV DNPEG+VME+WVGYLRKVCDGFVESAEHPDS T+ FWDKV +GGGSGV+Y TGW+S F+CF+K+GKFMG+NT G E+PLI + +CHNVVSCPV I+DNG E+D+TLF GQVAL+A G EGG+PTIRPRNDWCLAV K
Sbjct: 334 QAYFSYEIHAECGLPSVTLMGTVQDWKLLRAKVERLLDFEVIDNPEGDVMEVWVGYLRKVCDGFVESAEHPDSTETLQFWDKVVSHIGGGSGVSYITGWLSAFACFNKDGKFMGRNTEIPGTGSYRDTAVPDKSNECEYPLIETSQICHNVVSCPVKINDNGVEYDSTLFVGQVALEARNGGEGGYPTIRPRNDWCLAVPAK 535
BLAST of mRNA_E_fasciculatus_S2_contig75.15661.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H3_9PHAE) HSP 1 Score: 271 bits (692), Expect = 9.930e-83 Identity = 129/203 (63.55%), Postives = 155/203 (76.35%), Query Frame = 3
Query: 636 QAYFEYGICLACGIPSVTMMGTVEDWKLLREKIERLLEFEVQDNPEGNVMELWVGYLRKVCDGFVESAEHPDSAATVDFWDKVYPPLGGGSGVTYTTGWVSTFSCFDKEGKFMGKNTS-------RGG----------EFPLITS--LCHNVVSCPVAIDDNGHEHDATLFTGQVALKAERGAEGGHPTIRPRNDWCLAVAVK 1187
QAYF Y I L CG+PSVT+MGTV+DWKLLR K+ERLL+FEV+DNPE +VME+WVGYLR+VCDGFVESAEHPDS T+ WDKV P +GGGSGV+Y TGW+ F+CF+K+GKFMG+NT+ RGG ++PLI + +CHN VSCPV I+DNG E+D TLF GQVAL+A G EGG+P RPRN WCLAV K
Sbjct: 283 QAYFSYEIHLECGLPSVTLMGTVQDWKLLRAKVERLLDFEVKDNPEEDVMEVWVGYLREVCDGFVESAEHPDSTETLQVWDKVVPHIGGGSGVSYITGWLPAFACFNKDGKFMGRNTNKARIGLNRGGNAVRDESGECKYPLIDTGEICHNAVSCPVKINDNGVEYDGTLFVGQVALEARNGGEGGYP--RPRNGWCLAVPAK 483
BLAST of mRNA_E_fasciculatus_S2_contig75.15661.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX2_9PHAE) HSP 1 Score: 253 bits (646), Expect = 3.860e-78 Identity = 121/200 (60.50%), Postives = 143/200 (71.50%), Query Frame = 3
Query: 636 QAYFEYGICLACGIPSVTMMGTVEDWKLLREKIERLLEFEVQDNPEGNVMELWVGYLRKVCDGFVESAEHPDSAATVDFWDKVYPPLGGGSGVTYTTGWVSTFSCFDKEGKFMGKNTS------------RGGEFPLI--TSLCHNVVSCPVAIDD--NGHEHDATLFTGQVALKAERGAEGGHPTIRPRNDWCLAVAVK 1187
Q YFE+ + CGIPSVT+ GTV DWKLLREK+ERLLEFEV NPEG VM++WVGYLRKVCDGFVESAEHP S T++FWD+V GGSGV Y TGWVS F+CF+ +GKF+GK T + EFP+I +CHNVVSCPV I D + E+D TLF GQ +AER GHPT+RPR+DWC+AVAVK
Sbjct: 128 QNYFEFRMRRGCGIPSVTLRGTVRDWKLLREKVERLLEFEVDGNPEGEVMQIWVGYLRKVCDGFVESAEHPGSPETLEFWDRVLTDKRGGSGVNYITGWVSAFTCFNSDGKFLGKRTKLRSFDENLKIVEKEVEFPIIGGRDICHNVVSCPVKIVDVSDRREYDGTLFAGQTVCEAERPGATGHPTVRPRSDWCMAVAVK 327
BLAST of mRNA_E_fasciculatus_S2_contig75.15661.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB67_ECTSI) HSP 1 Score: 244 bits (622), Expect = 8.840e-75 Identity = 120/200 (60.00%), Postives = 140/200 (70.00%), Query Frame = 3
Query: 636 QAYFEYGICLACGIPSVTMMGTVEDWKLLREKIERLLEFEVQDNPEGNVMELWVGYLRKVCDGFVESAEHPDSAATVDFWDKVYPPLGGGSGVTYTTGWVSTFSCFDKEGKFMGKNTS------------RGGEFPLITS--LCHNVVSCPVAIDDN--GHEHDATLFTGQVALKAERGAEGGHPTIRPRNDWCLAVAVK 1187
QAYFEY + CGIPSVT+MGTV DWKLLREKIERLLEFEV NP+G VM+ WVGYLRKVCDGFVESAEHP S T++FWD+V GSGV+Y TGWVS F+CF + F+GK T + FP+I +C +VVSCPV I D G E+D TLF GQ +AER E GHPT+RPR+DWC+AVAVK
Sbjct: 110 QAYFEYTMMYRCGIPSVTLMGTVGDWKLLREKIERLLEFEVDGNPQGKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRVLTHEPEGSGVSYITGWVSAFTCFGSDVNFLGKRTKFMSRDENRNIVEKDWGFPMIPDQEICIDVVSCPVKIIDATVGREYDGTLFAGQTVCEAERPGETGHPTVRPRSDWCMAVAVK 309
BLAST of mRNA_E_fasciculatus_S2_contig75.15661.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL09_ECTSI) HSP 1 Score: 199 bits (505), Expect = 8.350e-59 Identity = 98/110 (89.09%), Postives = 105/110 (95.45%), Query Frame = 1
Query: 310 INAYNTHCALVLSPDDVWLTILSQFCAYVNKNAEGLRDRVVEHEGKKKLTVYGYGSLETADYEKVIKDLLGEIRKNIKSPELADWFRPGFSTTTETDEVCAAATAMASLK 639
+ AYNTHCAL +SPDDVWLTILSQFCAYVNKNAEGLRDRVVEHEGKK LTV GYGSLETADY K+IKDLLG+IR+NIKSPELADWFRPGFST+TETDEVCAAATAMASL+
Sbjct: 1 MTAYNTHCALEVSPDDVWLTILSQFCAYVNKNAEGLRDRVVEHEGKKGLTVEGYGSLETADYAKLIKDLLGQIRQNIKSPELADWFRPGFSTSTETDEVCAAATAMASLQ 110
BLAST of mRNA_E_fasciculatus_S2_contig75.15661.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F1_ECTSI) HSP 1 Score: 189 bits (481), Expect = 6.030e-54 Identity = 86/127 (67.72%), Postives = 101/127 (79.53%), Query Frame = 3
Query: 636 QAYFEYGICLACGIPSVTMMGTVEDWKLLREKIERLLEFEVQDNPEGNVMELWVGYLRKVCDGFVESAEHPDSAATVDFWDKVYPPLGGGSGVTYTTGWVSTFSCFDKEGKFMGKNTSRGGEFPLIT 1016
QAYF Y I CG+PSVT+MGTV+DWKLLR K+ERLL+FEV DNPEG+VME+WVGYLRKVCDGFVESAEHPDS T+ FWDKV +GGGSGV+Y TGW+S F+CF+K+GKFM R I+
Sbjct: 149 QAYFSYEIHAECGLPSVTLMGTVQDWKLLRAKVERLLDFEVIDNPEGDVMEVWVGYLRKVCDGFVESAEHPDSTETLQFWDKVVSHIGGGSGVSYITGWLSAFACFNKDGKFMDGEEHRNSRNRFIS 275
BLAST of mRNA_E_fasciculatus_S2_contig75.15661.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ89_ECTSI) HSP 1 Score: 179 bits (455), Expect = 7.780e-51 Identity = 87/110 (79.09%), Postives = 99/110 (90.00%), Query Frame = 1
Query: 310 INAYNTHCALVLSPDDVWLTILSQFCAYVNKNAEGLRDRVVEHEGKKKLTVYGYGSLETADYEKVIKDLLGEIRKNIKSPELADWFRPGFSTTTETDEVCAAATAMASLK 639
+ AYNTHC LV+SPDDVWL IL+QFCAYVNKNAEGLRDR+V+HEGKK+L V G+L TADY ++I+DLLG IR+NIKSPELADWFRPGFSTTTE DEVCAAATAMASL+
Sbjct: 1 MTAYNTHCNLVISPDDVWLAILAQFCAYVNKNAEGLRDRIVQHEGKKELVVASDGTLRTADYPRMIRDLLGLIRQNIKSPELADWFRPGFSTTTERDEVCAAATAMASLQ 110 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig75.15661.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig75.15661.1 >prot_E_fasciculatus_S2_contig75.15661.1 ID=prot_E_fasciculatus_S2_contig75.15661.1|Name=mRNA_E_fasciculatus_S2_contig75.15661.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=231bp MATSAPASGSGVEVKHVTISPASSNDKLEFTRNFEQVFKPSSSLRGAFEHback to top mRNA from alignment at E_fasciculatus_S2_contig75:18086..20676- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig75.15661.1 ID=mRNA_E_fasciculatus_S2_contig75.15661.1|Name=mRNA_E_fasciculatus_S2_contig75.15661.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2591bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig75:18086..20676- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig75:18086..20676- >mRNA_E_fasciculatus_S2_contig75.15661.1 ID=mRNA_E_fasciculatus_S2_contig75.15661.1|Name=mRNA_E_fasciculatus_S2_contig75.15661.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=693bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig75:18086..20676- (Ectocarpus fasciculatus EfasUO2)back to top |