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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1842 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 1149 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842411.5837917-UTR-E_fasciculatus_S2_contig75:130..149 | 1696842411.5837917-UTR-E_fasciculatus_S2_contig75:130..149 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig75 131..149 + |
| 1696842411.6329784-UTR-E_fasciculatus_S2_contig75:2074..2748 | 1696842411.6329784-UTR-E_fasciculatus_S2_contig75:2074..2748 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig75 2075..2748 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842411.594753-CDS-E_fasciculatus_S2_contig75:149..287 | 1696842411.594753-CDS-E_fasciculatus_S2_contig75:149..287 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig75 150..287 + |
| 1696842411.6049619-CDS-E_fasciculatus_S2_contig75:752..1022 | 1696842411.6049619-CDS-E_fasciculatus_S2_contig75:752..1022 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig75 753..1022 + |
| 1696842411.619088-CDS-E_fasciculatus_S2_contig75:1333..2074 | 1696842411.619088-CDS-E_fasciculatus_S2_contig75:1333..2074 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig75 1334..2074 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig75.15660.1 >prot_E_fasciculatus_S2_contig75.15660.1 ID=prot_E_fasciculatus_S2_contig75.15660.1|Name=mRNA_E_fasciculatus_S2_contig75.15660.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=383bp
MNELAKVVAELGVDLWLDGQYLSAQVKDVASKTRAEQLLRHELASKYPNL
LVSVTTVADATGPTVVTGAGAGTLSPPLSEDRERGGSGGDDWKAGLKQAK
APAAAPATVHGGDVAPAVTTGSASQRKGGESAAFGQGEQSTRPTVREAAT
PAAVEVGVLTTPATALRPSRRGTGASSAATAARRGSDAGVGGGDGDGRGA
ACSLSSSFGTASGPPASAVGTGGFSSVGTARVPSPANTGDSGALAPAGVG
QHTLAPTSAAFPARTNGAAAAPTPAAGAGYATDGGEATADSRRAAAAPTA
AVVSDATDASRPAAFAAGSSWPVRQEIDTVVGPERDELLTQVPQEESVGH
GGWEDDEEEQGQRLMMSFAMPPHLTAGDAAWK* back to topmRNA from alignment at E_fasciculatus_S2_contig75:131..2748+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig75.15660.1 ID=mRNA_E_fasciculatus_S2_contig75.15660.1|Name=mRNA_E_fasciculatus_S2_contig75.15660.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2618bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig75:131..2748+ (Ectocarpus fasciculatus EfasUO2)
TTTCGTCCGGCAAGGGTTCATGAACGAACTGGCAAAGGTCGTGGCCGAGT
TGGGGGTGGACTTGTGGCTCGACGGCCAATATTTATCTGCACAAGTCAAA
GACGTTGCTTCGAAGACGCGTGCTGAACAACTTCTTCGACACGAGCTCGC
TTCCAAGGTAGGTACTCTTAGAAGACCTCGGTGACGTCATGGAAACGTAA
CCACGTTATGGAGCGTCGAACGGGAGGCCTCAGGAGAGAGAGGATACAGG
TTTCAGTCCTGGCTTGTGCCGTCCCGCGTGCTCTGTACGCCTATGTTGTG
TTAACTCTGCGGTTGACGAGTCTCGAGCGGTGTGTACATGGCGTAGTTTC
CCATGCAAATCATGCCCCGGAAGGAATGGCCTCTGGCACCACTTTTACGT
TCGACCGTTGGCACCAATTAAGTTTATGGTAGGCAGGGGTGACGCTGCAA
CAGTTTGAAACGCGTGCAGACGTTGCAGGACCGCGAATGATTCTGACACC
AGCTCCTTTCCTGCACCGCACCCTCCCTGCCACGGCGTCTTGCCTCGGTG
CCGGCAATCGCGTGAAAACTATCGCATCCACAACGCCACTTGCTCAACAA
ATACCCGGGGATACCATCGCAGTATCCTAACCTTCTGGTGAGCGTTACGA
CCGTTGCCGACGCGACGGGCCCTACGGTGGTGACCGGCGCTGGGGCCGGA
ACTCTTTCTCCCCCCCTGTCCGAGGATCGAGAGCGCGGCGGCAGCGGCGG
GGATGATTGGAAGGCTGGCTTGAAGCAAGCCAAGGCTCCTGCTGCCGCTC
CTGCCACAGTGCACGGTGGTGACGTTGCTCCAGCTGTTACCACGGGTTCG
GCTTCACAGCGGAAAGGCGGAGAGAGTGCGGCGTTTGGTCAGGTATGTAA
TGGTAGCCTTTGGGGAAGCCTGACGGAAAACACTGATGCATCATGTTTGC
CTCCGGCTTTTGTGGAACCAAACGAAAGAATGTCGGCATCAATAACCCAC
CCGTTCGCCAAACATGTTGTGCGTGTCAGTATCACGTTAGGAGACTCTTC
CGGCTTTTGCTTTGGTAAGCTGATAACGGGTATGTTTGCCGTGCTGTGCT
GTGACTCGGACGGCTACGCAGAAACGATGGTTGCCACTTATCATTGTGGG
TCTTTGACGGAACCTGACCACGACCAATGTTACGTTTGCCGGTGGATGTT
TAGGGAGAGCAATCTACGCGACCCACCGTGAGGGAAGCAGCGACGCCGGC
GGCGGTGGAGGTGGGAGTGTTGACGACGCCTGCGACGGCACTGAGACCTT
CAAGACGGGGGACTGGCGCTTCTTCAGCCGCTACCGCTGCTCGACGTGGT
AGCGATGCTGGTGTTGGCGGTGGCGATGGGGACGGTCGTGGTGCTGCTTG
CTCTTTATCGTCGAGTTTCGGGACAGCCTCCGGTCCGCCAGCAAGTGCAG
TGGGTACGGGGGGCTTCAGCAGCGTGGGAACGGCACGGGTTCCCTCCCCC
GCCAACACGGGAGATTCTGGAGCTCTGGCTCCGGCGGGAGTGGGGCAGCA
CACGTTGGCGCCGACATCAGCAGCGTTTCCGGCAAGGACAAACGGGGCAG
CTGCCGCCCCTACCCCTGCTGCTGGTGCCGGATATGCTACAGATGGCGGC
GAAGCTACTGCGGACAGCAGGCGAGCTGCTGCTGCACCCACTGCTGCTGT
TGTATCCGACGCTACTGACGCCTCTCGCCCGGCGGCGTTTGCTGCTGGTT
CTTCTTGGCCGGTCCGGCAGGAGATCGACACGGTGGTTGGCCCGGAGCGT
GACGAGTTGTTGACACAAGTACCGCAGGAGGAGTCTGTCGGACACGGCGG
TTGGGAAGACGACGAGGAGGAGCAAGGGCAGAGGCTCATGATGTCCTTTG
CCATGCCACCCCACTTAACAGCTGGAGATGCTGCGTGGAAATGACGAGGA
GGGTGGCATTTGTCAATATGCCATGAGCACAGGAAGGTGGGGGATGACCC
CAATAGGTTCACCATATCCGGGGTAGGGGGGGGTGAGCTGCGGGTACGCG
GTGAGGGTAGGTAGCCGCTGGTATAAGGTGCATCCCTCGTTGCCTGTGCG
TGCATGCAGGGGAAGCAGCTCTTCACCCCTCTGAGACATTTTACAGGAGT
TTGGTCGGCTTCGAAATTGCAACCAAGATGCGGCGTTCTTGGTGGACATT
TGAAGGCGATCAAACAACGTGTCCATGCGTGCAACTGCCGCACCAAGGGG
CAACGGGAGGTCAGGCAGTTGACGTAGGGGCGGGGTGAATGGCCTAGAGA
GAGGGGCCGAGGGGGACAAAACAGCATGGAGGGCATGGAGAACGGTGGTG
CCATCGATGAATACGAAGCGGCACGTTGGATGTCACCAGAGTCTTCTGCT
CCCCTGCCTGGTTGATGTTGTCGCGGGCATTAGAAAAGCGGCGAAAATCA
AGTCATTCTAGCTGCCGGCCGACTACTACTGTAAACAAGCTGGATTTTTC
CCTGACGGGATCAACCTTGTATATGCACGGCGGCAGTGGACCACCGTCAC
GAGCCCAGCAAGTCGTCACGGCGGCCAAGTGCGGAGATCCAGACCGGAAA
AGGGCGACAAGCACCGAC back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig75:131..2748+ >mRNA_E_fasciculatus_S2_contig75.15660.1 ID=mRNA_E_fasciculatus_S2_contig75.15660.1|Name=mRNA_E_fasciculatus_S2_contig75.15660.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1149bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig75:131..2748+ (Ectocarpus fasciculatus EfasUO2)
ATGAACGAACTGGCAAAGGTCGTGGCCGAGTTGGGGGTGGACTTGTGGCT
CGACGGCCAATATTTATCTGCACAAGTCAAAGACGTTGCTTCGAAGACGC
GTGCTGAACAACTTCTTCGACACGAGCTCGCTTCCAAGTATCCTAACCTT
CTGGTGAGCGTTACGACCGTTGCCGACGCGACGGGCCCTACGGTGGTGAC
CGGCGCTGGGGCCGGAACTCTTTCTCCCCCCCTGTCCGAGGATCGAGAGC
GCGGCGGCAGCGGCGGGGATGATTGGAAGGCTGGCTTGAAGCAAGCCAAG
GCTCCTGCTGCCGCTCCTGCCACAGTGCACGGTGGTGACGTTGCTCCAGC
TGTTACCACGGGTTCGGCTTCACAGCGGAAAGGCGGAGAGAGTGCGGCGT
TTGGTCAGGGAGAGCAATCTACGCGACCCACCGTGAGGGAAGCAGCGACG
CCGGCGGCGGTGGAGGTGGGAGTGTTGACGACGCCTGCGACGGCACTGAG
ACCTTCAAGACGGGGGACTGGCGCTTCTTCAGCCGCTACCGCTGCTCGAC
GTGGTAGCGATGCTGGTGTTGGCGGTGGCGATGGGGACGGTCGTGGTGCT
GCTTGCTCTTTATCGTCGAGTTTCGGGACAGCCTCCGGTCCGCCAGCAAG
TGCAGTGGGTACGGGGGGCTTCAGCAGCGTGGGAACGGCACGGGTTCCCT
CCCCCGCCAACACGGGAGATTCTGGAGCTCTGGCTCCGGCGGGAGTGGGG
CAGCACACGTTGGCGCCGACATCAGCAGCGTTTCCGGCAAGGACAAACGG
GGCAGCTGCCGCCCCTACCCCTGCTGCTGGTGCCGGATATGCTACAGATG
GCGGCGAAGCTACTGCGGACAGCAGGCGAGCTGCTGCTGCACCCACTGCT
GCTGTTGTATCCGACGCTACTGACGCCTCTCGCCCGGCGGCGTTTGCTGC
TGGTTCTTCTTGGCCGGTCCGGCAGGAGATCGACACGGTGGTTGGCCCGG
AGCGTGACGAGTTGTTGACACAAGTACCGCAGGAGGAGTCTGTCGGACAC
GGCGGTTGGGAAGACGACGAGGAGGAGCAAGGGCAGAGGCTCATGATGTC
CTTTGCCATGCCACCCCACTTAACAGCTGGAGATGCTGCGTGGAAATGA back to top
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