mRNA_E_fasciculatus_S2_contig7474.15640.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7474.15640.1
Unique NamemRNA_E_fasciculatus_S2_contig7474.15640.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7474.15640.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU8_ECTSI)

HSP 1 Score: 1499 bits (3882), Expect = 0.000e+0
Identity = 1242/1660 (74.82%), Postives = 1271/1660 (76.57%), Query Frame = 1
Query:    1 VPCAATAWSRVANATSPEKDDAGGKGVTTGVAKGSPPTPSVVGAGGATPAAAGGKPRLDWGMGAVSAGFVPSYSAEAASSPQTASAVAVLPGESPGAPAPAAVGGGTADAAPTQPPTLQKRGSRRLGWGMGIGSKLSADEKATEAAAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-PKALEVAPADQSNATSAVSDLATADAVQDGAVKKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMATGATPKTPGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAMKEFGNAANSAVDGGSGGVRRRR----------ERGSGEIRVVGSGVGGKEQQQRMKRAGSDSGKKAKEGLAPGPQKRASSDGIVEGSPTKTGQCAAXXXXXXXXXXXXXXXXXXXXXRKRENDGPATAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------SEDHPVADVDLKRVGEETARRGGDGRASAPNGGHHGKEKRPRRSADAADSGVKTPEAPAAP-TSKEGHAKAADGGSA--LMTAVAGAAATXXXXXXXGRAKETSRAAARQCNPSGTELRRLTSGTEVEERRTLAALRDLEACLEESRIAAADAASTPVAEAERTLVVANASASQAKT-GEANNPGTEKIIASXXXXXXXXXXXXTLTPAVAAAV----AALPAELATALGLAEGDGKRGEGGGSNQPTVAGAGAGGVGLDHEERNGFSPPHVDLVRQARATVEFRVARRRYKGELKIAAAAASLACGSLPSPPVEKAXXXXXXXXXX------RSEHGGPDEASAERLRGPSQSPPGVVTTE---------PSAASAAARKGPSGLRTRVPTGAPVSHLFRARVDAAPGGVPKSGRDVAIARVMRENQARALRRRWEKLGDQYAGLHNAWHVDMLRWEEKMEEEEAXXXXXXXXXXXXXXXXXXAWGPVGXXXXXXXXXXXXXX--HGASLRSERRGGRRLSDVVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDGLPARCRGLPADAACPAGCNCPAAVEAKRKLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKVSIDEDGQPFFPVPQRDDSFATADMHPPSRTRPLLDIQREALSLACSGEVVGAAAAAAKTQVSEALLRRSAAAEAVGAGIPQQRHESPT-EGLDLLSPAEVKAAAARLPPAAINVAAYRLCMRSFPPPDDGXXXXXX-VIYAARDVAAXXXGAGSGAGRFDEGAIMPYRFSDARVTGVPHELAPPRSASATAXXXXXXXXGGIAGDGVDAPYEPDGLSGXXXXXXXXXXXXXXXXXXXXRMGGPGSQSSSAYLAAAAARAVGEEANGNDDEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKRGAPRRKSVVAGXXXXXXXXXXTLGSAAGAQQRPISTKGAKWTEEEREAFFSIHDARPGNKEWERYAELIHTKTPTQVKTFYTNSKNKNLLEAEAITVRKDNLNRRDRQTAEVSAI 4848
            VP +  AWSRVANA SPE D+AGGK V+TG AKGSPPTPSVVGAGG+TPAAAGGKPRLDWGMGAVSAGFVPSYSAEAASSPQT SAVAVL GESPG PAPAAVGGGTADAAP QPPTLQKRGSRRLGWGMGIGSKLSADEKATEAAAALXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXX  PKALEVA ADQSNAT  V D ATA AVQDGAV+KS         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                 XXXXXXXXXXXXXXXKAMKEFGN AN                        ERGSGEIRV     GGKEQQ RMKRAGSDSGKK KEGLAPGPQKR SSDGIVEGSP KTG  A   XXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXX      SEDH + DVDLK VGEE ARRGGDG  SAPNGGHHG+EK                       TSKEG  KAADGGSA             XXXXXXX  +KETS AAARQC+PS  ELRRLTSGTEVEERRTLAALRDLEACLEE RIAAA AASTPVAEAE+  VVA+ASASQAK+ GEANNPGTEK IAS            TLTPAVAA      AALPAELATALGLAEGDGKR EGGGS+QP VAG     VG+DHE RNGFSPPHVDLVRQARA+VEFRVARRRYKGEL+ AA                  XXXXXXXXXX      RSEHGGPDE+SA+ L GPSQSPPGVVTTE          +AASA ARKGPSGLRTRVPTGAPVSHLFRARVDAAPGGVPKSGRDVAIARVMRENQ   LRRRWEKLGDQYAGLHNAWHVDMLRWEEKMEE   XXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXX  HGASLRSERRGGRRLSDVVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDGLPARCRGLPADAACPAGCNCPAAVEA+RKLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKVSIDEDGQPFFPVPQRDDSFATADMHPPSRTRPLLDIQREALSLACS E+VGA AAAAKTQVSE L RR+AAA    AGIPQQ HESPT E LDLLSPAEV+AAAARLPPAAINVAAYRLCMRSFPPPD+G       VIYAARDVA    GAGSGAGRFDEGAIMPYRFSDARVTGVP ELAPPRSAS   XXXXXXXX  +AGD VDAPYEPD   G            XXXXXXXX                     VGEEAN NDD+                         XXXXXXXXX  KRG PRRKS    XXXXXXXXXX           P STKGAKWT EEREAFFSIHDARPGNKEWERYAELIHTKTPTQVKTFYTNSKNKNLLEAEAITVRKDNLNRRD    + +A+
Sbjct:  747 VPASGGAWSRVANAASPEMDNAGGKTVSTGGAKGSPPTPSVVGAGGSTPAAAGGKPRLDWGMGAVSAGFVPSYSAEAASSPQTTSAVAVLAGESPGTPAPAAVGGGTADAAPAQPPTLQKRGSRRLGWGMGIGSKLSADEKATEAAAALXXXXXXXXXXXXXXAAXXXXXXXXXXXXXXXXXXXXPKALEVASADQSNATVEVGDAATAGAVQDGAVEKSASAKKPATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVEDVASGGSKGTATSPALSPPAAGVSPRTISXXXXXXXXXXXXXXXKAMKEFGNTANXXXXXXXXXXXXXXXXXXXXXXXXERGSGEIRV-----GGKEQQ-RMKRAGSDSGKKVKEGLAPGPQKRPSSDGIVEGSPNKTGTTAQATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYMSEXXXXXXXXXXXXXXSEDHAMVDVDLKLVGEEPARRGGDGTVSAPNGGHHGREKXXXXXXXXXXXXXXXXXXXXXXXTSKEGQPKAADGGSAPXXXXXXXXXXXXXXXXXXXXXSKETSNAAARQCHPSRKELRRLTSGTEVEERRTLAALRDLEACLEEGRIAAATAASTPVAEAEKAPVVADASASQAKSSGEANNPGTEKTIASRSSANNDGG---TLTPAVAAXXXXXXAALPAELATALGLAEGDGKRSEGGGSDQPAVAGGDR--VGVDHEGRNGFSPPHVDLVRQARASVEFRVARRRYKGELENAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSEHGGPDESSAKGLPGPSQSPPGVVTTERAGASPGSKAAAASAPARKGPSGLRTRVPTGAPVSHLFRARVDAAPGGVPKSGRDVAIARVMRENQ---LRRRWEKLGDQYAGLHNAWHVDMLRWEEKMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGASLRSERRGGRRLSDVVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDGLPARCRGLPADAACPAGCNCPAAVEAERKLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKVSIDEDGQPFFPVPQRDDSFATADMHPPSRTRPLLDIQREALSLACSEEIVGATAAAAKTQVSETLRRRTAAA----AGIPQQHHESPTTESLDLLSPAEVQAAAARLPPAAINVAAYRLCMRSFPPPDNGDGDGDRGVIYAARDVATAAGGAGSGAGRFDEGAIMPYRFSDARVTGVPDELAPPRSASXXXXXXXXXXXXXVAGDDVDAPYEPDRFGGGGGVRALHDGGRXXXXXXXXXXXXXXXXXXXXXXXXX--XXVGEEANDNDDD---EYGDALGGAGRGLGRRGGMSPGXXXXXXXXXKGKRGLPRRKSAXXXXXXXXXXXXXXXXXXX-XXXXPPSTKGAKWTVEEREAFFSIHDARPGNKEWERYAELIHTKTPTQVKTFYTNSKNKNLLEAEAITVRKDNLNRRDSTIVKEAAV 2377          
BLAST of mRNA_E_fasciculatus_S2_contig7474.15640.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H2_9PHAE)

HSP 1 Score: 1484 bits (3842), Expect = 0.000e+0
Identity = 1171/1717 (68.20%), Postives = 1202/1717 (70.01%), Query Frame = 1
Query:   19 AWSRVANATSPEKDDAGGKGVTTGVAKGSPPTPSVVGAGGATPAAAGGKPRLDWGMGAVSAGFVPSYSAEAASSPQTASAVAVLPGESPGAPAPAAVGGGTADAAPTQPPTLQKRGSRRLGWGMGIGSKLSADEKATEAAAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPKALEVAPADQSNATSAVSDLATADAVQDGAVKKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMATGATPKTPGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAMKEFGNAANSAVDGGSGGVRRRR--ERGSGEIRVVGSGVGGKEQQQRMKRAGSDSGKKAKEGLAPGPQKRASSDGIVEGSPTKTGQCAAXXXXXXXXXXXXXXXXXXXXXRKRENDGPATAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SEDHPVADVDLKRVGEETARRGGDGRASAPNGGHHGKEKRPRRSADAADSGVKTPEAPAAP-TSKEGHAKAADGGSALMTAVAGAAATXXXXXXXGRAKETSRAAARQCNPSGTELRRLTSGTEVEERRTLAALRDLEACLEESRIAAADAASTPVAEAERTLVVANASASQAKTG-EANNPGTEKIIASXXXXXXXXXXXXTLTPAVA----AAVAALPAELATALGLAEGDGKRGEGGGSNQPTVAGAGAGGVGLDHEERNGFSPPHVDLVRQARATVEFRVARRRYKGELK-IAAAAASLACGSLPSPPVEKAXXXXXXXXXXRSEHGGPDEASAERLRGPSQSPPGVVTTEPSAASAA---------ARKGPSGLRTRVPTGAPVSHLFRARVDAAPGGVPKSGRDVAIARVMRENQARA----------------------------------------------------------------------------------LRRRWEKLGDQYAGLHNAWHVDMLRWEEKMEEEEAXXXXXXXXXXXXXXXXXXAWGPVGXXXXXXXXXXXXXXHG---ASLRSERRGGRRLSDVVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDGLPARCRGLPADAACPAGCNCPAAVEAKRKLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKVSIDEDGQPFFPVPQRDDSFATADMHPPSRTRPLLDIQREALSLACSGEVVGAAAAAAKTQVSEALLRRSAAAEAVGAGIPQQRHES-PTEGLDLLSPAEVKAAAARLPPAAINVAAYRLCMRSFPPPDD-GXXXXXXVIYAARDVAAXXXGAGSGAGRFDEGAIMPYRFSDARVTGVPHELAPPRSASATAXXXXXXXXGGIAGDGVDAPYEPDGLSGXXXXXXXXXXXXXXXXXXXXRMGGPGSQSSSAYLAAAAARAVGEEANGNDDEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKRGAPRRKSVVAGXXXXXXXXXXTLGSAAGAQQRPISTKGAKWTEEEREAFFSIHDARPGNKEWERYAELIHTKTPTQVKTFYTNSKNKNLLEAEAITVRKDNLNRRDRQTAEVSAI 4848
            AWSRVANA  PE ++AGGK V+T  AKGSPPTPSVVGAGG+TPA A GKPRLDWGMGAVSAGFVPSYSAEA SSPQT SA AVL GESPG       GGGTADAAP QPPTL KRGSRRL WGMGIGSKLSADEKATEAAAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KA EVA ADQSNAT  V D ATA A QDGAVKK    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                   XXXXX        KAM E GNAANS               ERGSGE+RV G          RMKRAGSDSGKK KEG APGPQKR+SSDGIVEG P KTGQC +                     RK E DGPA    XXXXXXXX                               SEDHP+ D DLKR GEE ARRGG GR SAPNGGHHG+E+                       TSK+G AKAA GGS            XXXXXXXGRAKETS AAARQC+PS  ELRRLTSGTEVEERRTLAALRDLEACLEE RIAAA AASTP  EAE+ LVV +AS+SQAK+  EANNPGTE+II    XXXXXXXX  TLTPAV      AVAALPAELATALGLAEGDGKRGEGGGSNQP VAG G  GVGLDHE RNGFSPPHVDLVRQARA+VEFRVARRR+KGEL+  AAAAA+L  G  P PPV KA          RSEHGGPDEASA+ L GPSQSPP VV TE + AS           ARKGPSGLRTRVPTGAPVSHLFRARVDAAPGGVPKSGRDVAIARVMRENQARA                                                                                  LRRRWEKLGD+YAGLHNAWHVDMLRWEEKMEEE  XXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXX     ASLRSERRGGRRLSDVVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTD LPARCRGLPADAACPAGCNCPAAVEA+RKL NLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKVSIDEDGQPFFPVPQRDDSFATADMHPPSRTRPLLDIQREALSLACSGE+VGAAAAAAKTQVSEALLRR+ AA    AGIPQQ  ES  TEGLDLLSPAEV+AAAARLPP AINVAAYRLCMRSFPPP D        +IYAA DVAA   GAGSGAGRF+EGAIMPYRFSDARVTGVP ELAPPRSASA  XX      G + GD VDAPYEPD LSG               XX   RMGGPGSQS                        XX                                 KRG  R       XXXXXX    T GSAAGAQQRP STKGAKWT EEREAFFSIHDARPGNKEWERYAELIHTKTPTQVKTFYTNSKNKNLLEAEAITVRKDNLNRRDRQ AEVSAI
Sbjct:  907 AWSRVANAACPEMENAGGKAVSTSGAKGSPPTPSVVGAGGSTPATAVGKPRLDWGMGAVSAGFVPSYSAEATSSPQTTSAAAVLAGESPGXXXXXXXGGGTADAAPAQPPTLHKRGSRRLDWGMGIGSKLSADEKATEAAAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPEVASADQSNATFQVGDAATAGAAQDGAVKKFAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVEDFASGGSNGTAKSPALSPPAAGVSPRTISSSXXXXXDATTGGARKAMNECGNAANSXXXXXXXXXXXXXXXERGSGEVRV-GXXXXXXXXXXRMKRAGSDSGKKVKEGFAPGPQKRSSSDGIVEGFPNKTGQCGSPKTPHPPAPCP----------RKHEKDGPAAXXXXXXXXXXXSKDQRRGEPERLMHMSERRNNKSEGSGGTGGSEDHPMVDGDLKRAGEEPARRGGGGRVSAPNGGHHGRERXXXXXXXXXXXXXXXXXXXXXXXTSKDGQAKAAVGGSXXXXXXXXXXXXXXXXXXXGRAKETSNAAARQCHPSRKELRRLTSGTEVEERRTLAALRDLEACLEEGRIAAATAASTPAVEAEKALVVPDASSSQAKSSREANNPGTEEII---PXXXXXXXXGGTLTPAVXXXXXTAVAALPAELATALGLAEGDGKRGEGGGSNQPAVAGGG--GVGLDHEGRNGFSPPHVDLVRQARASVEFRVARRRHKGELENAAAAAATLVVGGTPGPPVGKAAGAAPVAVTARSEHGGPDEASAKGLPGPSQSPPAVVATERAGASPGSKAAXXXXXARKGPSGLRTRVPTGAPVSHLFRARVDAAPGGVPKSGRDVAIARVMRENQARAVAAQAELDERLLGLPRNTSPSLSGEAAAAAAAAQASALGTXXXXXXXXXXXXXXXXXXXIHAARLRELKPVMTRAIRRRQLELRRRWEKLGDEYAGLHNAWHVDMLRWEEKMEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLRSERRGGRRLSDVVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDALPARCRGLPADAACPAGCNCPAAVEAERKLLNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKVSIDEDGQPFFPVPQRDDSFATADMHPPSRTRPLLDIQREALSLACSGEIVGAAAAAAKTQVSEALLRRAVAA----AGIPQQHQESLATEGLDLLSPAEVQAAAARLPPPAINVAAYRLCMRSFPPPGDCDGDGDGGIIYAALDVAAAAGGAGSGAGRFNEGAIMPYRFSDARVTGVPDELAPPRSASAAXXXAA----GDVTGDDVDAPYEPDRLSGGGVRALHDGGRGGRGXX---RMGGPGSQSXXXXXXX---XXXXXXXXXXXXXXXXEFGDALGGAGRGLGRRGGMSPGEEGGGGRAGKGKRGLSRXXXXXX-XXXXXXAGGSTPGSAAGAQQRPPSTKGAKWTVEEREAFFSIHDARPGNKEWERYAELIHTKTPTQVKTFYTNSKNKNLLEAEAITVRKDNLNRRDRQMAEVSAI 2588          
BLAST of mRNA_E_fasciculatus_S2_contig7474.15640.1 vs.
Match: Nuclear (receptor corepressor 1-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1T9_9STRA)

HSP 1 Score: 152 bits (383), Expect = 4.010e-33
Identity = 91/213 (42.72%), Postives = 120/213 (56.34%), Query Frame = 1
Query: 3046 RGGRRLSDVVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDGLPARCRGLPADAACPAGCNCPAAVEAKRKLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKVSI--DEDGQPFFPV--PQRDDSFATADMHPPSR 3672
            RGG    D   S+Y+ + + ++ E K K + RI +G  E+P+ML+   R    E+ D+ +   T+DG P RC        C A CNCP AVE + +  N W+D+EKCIFLDKFL +PKNF +IASFL RKS  DV++FYYDSK  I YK LLKE   R +G          A R VGA + +  D DG     +  P  D  + T + HP SR
Sbjct:  947 RGG----DFAGSEYDVSLITREIEKKEKMKIRIEQGGAEIPTMLSLSGRFGTHEFSDTSSGPLTSDGGPMRCASRTLTEKCTADCNCPRAVERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVWLKHAARQVGATIDLRCDNDGHEVLRLYPPGNDYLYTTFNKHPGSR 1155          
BLAST of mRNA_E_fasciculatus_S2_contig7474.15640.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ43_9STRA)

HSP 1 Score: 149 bits (375), Expect = 2.760e-32
Identity = 90/213 (42.25%), Postives = 119/213 (55.87%), Query Frame = 1
Query: 3046 RGGRRLSDVVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDGLPARCRGLPADAACPAGCNCPAAVEAKRKLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKVSI--DEDGQPFFPV--PQRDDSFATADMHPPSR 3672
            RGG    D   S+ +   + ++ E+K K + RI +G  E+P+ML+   R    E+ D+ +   T+DG P RC        C A CNCP AVE + +  N W+D+EKCIFLDKFL +PKNF +IASFL RKS  DV++FYYDSK  I YK LLKE   R +G          A R VGA + +  D DG     +  P  D  + T + HP SR
Sbjct:  644 RGG----DFAGSENDVTLITREIEEKEKMKVRIEQGGAEIPTMLSLSGRFGTHEFFDTSSGPLTSDGGPMRCASRTLTEKCTADCNCPRAVERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVWLKHAARQVGATIDLRCDNDGHEVLRLYPPGNDYLYTTFNKHPGSR 852          
BLAST of mRNA_E_fasciculatus_S2_contig7474.15640.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFX8_9STRA)

HSP 1 Score: 120 bits (302), Expect = 3.230e-27
Identity = 72/181 (39.78%), Postives = 95/181 (52.49%), Query Frame = 1
Query: 3139 RIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDGLPARCRGLPADAACPAGCNCPAAVEAKRKLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKVSIDEDGQPF-FPVPQRDDSFATADMHPPSRTR 3678
            RI +G + VP M+ A E R  P Y   W+ R           G   D         P   E KR     W+D+EKCIFLDKFL +PKNF +IASFL +K  +D V+FYYDSK  +DYK LL+E   R +G    W  T KA+   GAK++  E+ Q   F +P    ++ T + HP  + R
Sbjct:   12 RIEQGTIGVPPMMLAPEVRHTPAY---WDDRN----------GFVHD---------PLTDERKRMNDRPWSDLEKCIFLDKFLQYPKNFGKIASFLRQKDAKDCVKFYYDSKKDVDYKALLREYQQRRRGLRLLWTETAKAVERFGAKLTFHEETQEVDFELPASHRTYKTFNRHPKRKRR 170          
BLAST of mRNA_E_fasciculatus_S2_contig7474.15640.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TBG9_9STRA)

HSP 1 Score: 132 bits (331), Expect = 5.830e-27
Identity = 85/226 (37.61%), Postives = 116/226 (51.33%), Query Frame = 1
Query: 3028 SLRSERRG--------GRRLSDVVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDGLPARCRGLPADAACPAGCNCPAAVEAKRKLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAG-QWNATFKAIRSVGAKVSIDEDGQP--FFPVPQRDDSFATADMHPPSR 3672
            S R  RRG        G   SDVVRS+YE+ +++ +   K   E+RI  G   +P     +E+     YR+S +SR   D                     P   E +R+  + W+D+EKCIFLD+FL HPK+F +IASFL  K+ +D V FYYDSK SI YK  LKE + R K      W AT +A  SVGA ++     +    F +PQ D++F T + HP  R
Sbjct: 1002 SYRRPRRGMGAACSQSGMGASDVVRSEYEQEQIIAEITAKEAMEKRITHGGSALPRQRCQLEKELYVSYRNSQSSRRIFD---------------------PLLEEEERRNVSAWSDMEKCIFLDRFLQHPKDFRKIASFLRNKTTKDCVSFYYDSKQSIPYKAALKEHLQRKKRRGDVSWEATIQAALSVGAVITAGTSPEKPLVFKLPQGDNTFYTRNFHPMKR 1206          
BLAST of mRNA_E_fasciculatus_S2_contig7474.15640.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MIR1_9STRA)

HSP 1 Score: 127 bits (318), Expect = 4.240e-26
Identity = 83/220 (37.73%), Postives = 112/220 (50.91%), Query Frame = 1
Query: 3022 GASLRSERRGGRRLSD-----VVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDGLPARCRGLPADAACPAGCNCPAAVEAKRKLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKVSIDEDGQPFFPVPQRDDSFATADMHPP 3666
            G S  S RRG   L       ++RSDYE+ +++K+       ++RI  G VEVP M    E   +P Y D  N             GL  D         P   E +R     W+D+EKCIFLDKFL HPK F +IA +L  K+ +D V+FYYDSK  I YK LL+E   R +G    W+ T +A+ SVG  +++ +D    F +P  D +F T   HPP
Sbjct:  362 GQSHTSRRRGSSLLGTGRGVTIIRSDYEQEQLLKELSAAEALKKRISTGTVEVPCMEYKPELEIVPRYSDKVN-------------GLVLD---------PYQDELERAPVKPWSDLEKCIFLDKFLQHPKKFSKIAGYLRYKTAKDCVRFYYDSKRYIHYKALLREHQQRRRGLKLSWSETIRAVESVGGAMAL-QDETIDFALPPDDTTFTTFVRHPP 558          
BLAST of mRNA_E_fasciculatus_S2_contig7474.15640.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YC29_9STRA)

HSP 1 Score: 126 bits (317), Expect = 6.020e-26
Identity = 74/206 (35.92%), Postives = 111/206 (53.88%), Query Frame = 1
Query: 3058 RLSDVVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDGLPARCRGLPADAACPAGCNCPAAVEAKRKLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNK--GYAGQWNATFKAIRSVGA--KVSIDEDGQPFFPVPQRDDSFATADMHP 3663
            R  + VR++YE+ +++ +  +K   +++I  G   +P  +  +E      +  ++ S                          P AVEA+  ++N+WTD+EKCIFLD+F+HHPK+F +IASFL  KS  D V FYYDSK ++ YK  LKE + R K  G    W+AT +A  SVGA  K    ED    F +P  +D +AT+ +HP
Sbjct:  116 RRGNEVRTEYEQEQIIAEIAEKEAMDKKIAFGGSALPRQIGELESSLTASFHQNFTSHRFD----------------------PVAVEAEVSITNVWTDMEKCIFLDRFMHHPKDFRKIASFLRNKSTIDCVAFYYDSKQTVPYKGALKEFIMRRKRRGDYHVWDATIQAALSVGAVIKEGPSEDKPLLFLLPAHEDGYATSALHP 299          
BLAST of mRNA_E_fasciculatus_S2_contig7474.15640.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6N9_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.630e-25
Identity = 60/124 (48.39%), Postives = 80/124 (64.52%), Query Frame = 1
Query: 3214 DSWNSRGTTDGLPARCRGLPADAACPAGCNCPAAVEAKRKLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKV 3585
            D+ N R TTDG    C  +P   ACP  CNC   V+  +KL  +W+D EKCIF+DKFL  PKNF RI++FL  +S +D ++FYYD+K +I++K LLKE  +R K +   WN T KA   VGA +
Sbjct: 1235 DTNNHRLTTDGKKQACSMIPLAKACPINCNCALQVDKLQKLERIWSDTEKCIFIDKFLQFPKNFHRISTFLTNRSTKDCIKFYYDAKGTIEFKFLLKEFDSRRKTFKSTWNYTTKAAHMVGATI 1358          
BLAST of mRNA_E_fasciculatus_S2_contig7474.15640.1 vs.
Match: Nuclear (receptor co-repressor 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JC82_FISSO)

HSP 1 Score: 126 bits (316), Expect = 3.220e-25
Identity = 74/208 (35.58%), Postives = 111/208 (53.37%), Query Frame = 1
Query: 3058 RLSDVVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDGLPARCRGLPADAACPAGCNCPAAVEAKR--KLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNK--GYAGQWNATFKAIRSVGA--KVSIDEDGQPFFPVPQRDDSFATADMHP 3663
            R  + VRS+YE+ +++ +   K   E+RI  G  + P  + AVER+    + +++ ++                            VE ++   + N+WTD EKCIFLD+FL HPK+F +IASFL  K+  D ++FYYDSK ++ YK  LKE + R K  G    W AT +A  SVGA  K   DE+    F +P+ D ++ T D+HP
Sbjct:  970 RRGNEVRSEYEQEQIIAEIAAKEAMEKRIAFGGCKTPRQIGAVERQLTANFYNTFTAQKVD------------------------VVEQEKLCAMENMWTDTEKCIFLDRFLQHPKDFRKIASFLRNKTTRDCIKFYYDSKQTVSYKGALKEHIMRRKRRGEYHVWEATIQAALSVGAVVKAGTDEENPLVFTLPENDCTYNTRDLHP 1153          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7474.15640.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized0.000e+074.82protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized0.000e+068.20protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Nuclear4.010e-3342.72receptor corepressor 1-like protein n=1 Tax=Nannoc... [more]
Uncharacterized2.760e-3242.25protein n=1 Tax=Nannochloropsis salina CCMP1776 Ta... [more]
Hypothetical3.230e-2739.78protein (Fragment) n=1 Tax=Rhizochromulina marina ... [more]
Hypothetical5.830e-2737.61protein n=2 Tax=Ditylum brightwellii TaxID=49249 R... [more]
Hypothetical4.240e-2637.73protein (Fragment) n=1 Tax=Dictyocha speculum TaxI... [more]
Hypothetical6.020e-2635.92protein (Fragment) n=1 Tax=Amphiprora paludosa Tax... [more]
Hypothetical1.630e-2548.39protein (Fragment) n=1 Tax=Spumella elongata TaxID... [more]
Nuclear3.220e-2535.58receptor co-repressor 1 n=2 Tax=Fistulifera solari... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7474contigE_fasciculatus_S2_contig7474:271..7380 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score1525.4
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LGU8
Model size4848
KEGG koko:K04650
KEGG Pathwayko01522,ko04919,ko05202,map01522,map04919,map05202
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.regulation of glycolytic process by negative regulation of transcription from RNA polymerase II promoter
EggNOG OGsKOG1878@1,KOG1878@2759
Ec32 ortholog descriptionSANT/Myb domain transcription factor
Ec32 orthologEc-28_001270.1
Cds size4848
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7474.15640.1prot_E_fasciculatus_S2_contig7474.15640.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7474 271..7380 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842409.403452-CDS-E_fasciculatus_S2_contig7474:270..15931696842409.403452-CDS-E_fasciculatus_S2_contig7474:270..1593Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7474 271..1593 -
1696842409.4180825-CDS-E_fasciculatus_S2_contig7474:2194..29201696842409.4180825-CDS-E_fasciculatus_S2_contig7474:2194..2920Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7474 2195..2920 -
1696842409.4295833-CDS-E_fasciculatus_S2_contig7474:3121..45641696842409.4295833-CDS-E_fasciculatus_S2_contig7474:3121..4564Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7474 3122..4564 -
1696842409.4534175-CDS-E_fasciculatus_S2_contig7474:5081..60741696842409.4534175-CDS-E_fasciculatus_S2_contig7474:5081..6074Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7474 5082..6074 -
1696842409.4689817-CDS-E_fasciculatus_S2_contig7474:6634..67691696842409.4689817-CDS-E_fasciculatus_S2_contig7474:6634..6769Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7474 6635..6769 -
1696842409.4806855-CDS-E_fasciculatus_S2_contig7474:7152..73801696842409.4806855-CDS-E_fasciculatus_S2_contig7474:7152..7380Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7474 7153..7380 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7474.15640.1

>prot_E_fasciculatus_S2_contig7474.15640.1 ID=prot_E_fasciculatus_S2_contig7474.15640.1|Name=mRNA_E_fasciculatus_S2_contig7474.15640.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=1616bp
VPCAATAWSRVANATSPEKDDAGGKGVTTGVAKGSPPTPSVVGAGGATPA
AAGGKPRLDWGMGAVSAGFVPSYSAEAASSPQTASAVAVLPGESPGAPAP
AAVGGGTADAAPTQPPTLQKRGSRRLGWGMGIGSKLSADEKATEAAAALA
AEKAAAEKAEADKAAAAKKAADEAAAAAAVAAAPPKALEVAPADQSNATS
AVSDLATADAVQDGAVKKSAAAKKPAAAAAAAAATAGKEDSSARGASADG
AAASLPPSSSSSGVDQTAAASPPTPMATGATPKTPGEAAGRRKKDGGAAA
ASAGSAGSLKRRPPQQPRDEDVASGGKGTATTTSPALSPPPAVVSPRTLS
SSTPPSADATTGGARKAMKEFGNAANSAVDGGSGGVRRRRERGSGEIRVV
GSGVGGKEQQQRMKRAGSDSGKKAKEGLAPGPQKRASSDGIVEGSPTKTG
QCAAAAAAAAASGSPKTPQPPAPCPRKRENDGPATAATTAGGSSKDQRRR
ERERLMHMSERRNKKSGGGGGGAGGSEDHPVADVDLKRVGEETARRGGDG
RASAPNGGHHGKEKRPRRSADAADSGVKTPEAPAAPTSKEGHAKAADGGS
ALMTAVAGAAATGGAGAAGGRAKETSRAAARQCNPSGTELRRLTSGTEVE
ERRTLAALRDLEACLEESRIAAADAASTPVAEAERTLVVANASASQAKTG
EANNPGTEKIIASSSSSSSANDDGGTLTPAVAAAVAALPAELATALGLAE
GDGKRGEGGGSNQPTVAGAGAGGVGLDHEERNGFSPPHVDLVRQARATVE
FRVARRRYKGELKIAAAAASLACGSLPSPPVEKAAGAAAAAAATRSEHGG
PDEASAERLRGPSQSPPGVVTTEPSAASAAARKGPSGLRTRVPTGAPVSH
LFRARVDAAPGGVPKSGRDVAIARVMRENQARALRRRWEKLGDQYAGLHN
AWHVDMLRWEEKMEEEEAKEAASASGGAGEGDDGDAAWGPVGGGGGGGGG
SGSGGGHGASLRSERRGGRRLSDVVRSDYEEAEVVKKFEDKHKEEERIRK
GAVEVPSMLTAVERRQLPEYRDSWNSRGTTDGLPARCRGLPADAACPAGC
NCPAAVEAKRKLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDV
VQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKVSIDED
GQPFFPVPQRDDSFATADMHPPSRTRPLLDIQREALSLACSGEVVGAAAA
AAKTQVSEALLRRSAAAEAVGAGIPQQRHESPTEGLDLLSPAEVKAAAAR
LPPAAINVAAYRLCMRSFPPPDDGDGDGGGVIYAARDVAAAAGGAGSGAG
RFDEGAIMPYRFSDARVTGVPHELAPPRSASATAAAAAAAVAGGIAGDGV
DAPYEPDGLSGGGGGGIRALHDGGRGGRGGRRMGGPGSQSSSAYLAAAAA
RAVGEEANGNDDEYGDDEFQGRGGAGRGLGRRGGMSPGGEGGAGRGGKAK
RGAPRRKSVVAGGQEDGGGGGSTLGSAAGAQQRPISTKGAKWTEEEREAF
FSIHDARPGNKEWERYAELIHTKTPTQVKTFYTNSKNKNLLEAEAITVRK
DNLNRRDRQTAEVSAI
back to top

mRNA from alignment at E_fasciculatus_S2_contig7474:271..7380-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7474.15640.1 ID=mRNA_E_fasciculatus_S2_contig7474.15640.1|Name=mRNA_E_fasciculatus_S2_contig7474.15640.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7110bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7474:271..7380- (Ectocarpus fasciculatus EfasUO2)
GTGCCATGCGCCGCCACAGCATGGTCGAGGGTCGCGAACGCCACCTCCCC GGAGAAGGACGATGCAGGAGGGAAGGGTGTTACGACTGGCGTAGCCAAGG GTTCGCCACCGACCCCGTCCGTGGTCGGCGCTGGCGGCGCCACGCCTGCC GCTGCGGGCGGTAAACCCCGCTTGGACTGGGGCATGGGAGCCGTTTCGGC GGGCTTCGTGCCCTCTTATTCCGCGGAGGTGACGTGGTTGTGTTCGTTCG GTCGGTGGACGGGGAGGTGTCGGGCATTCGGGGATTGGGCTTGCTGCTGG AAGAAGCGCTGGGAGCGTACATAGCGTGACACCCTCTCTCGCTGGCTCGA AATATTATCTCCTGTGGCCGTTCTGCTCTTTTGCGGCCGAGAGTTGAAAC ACCCCCGCCATAGACGTTTCGCTACTCGAAGCGGAGCCGCCGCCAAAAAA AAACTGCAACTTGTCTATCTAGAGAAGCGTCTGTATTTTACGGGGAGAGG GTTTGCCTTTTAGACTTGAGCTAGTTATAGCTGGGGCTGGCCGACTAGGT CATGTCGTTATACAGACCCTGTTTTGTTTTTTTTCTCTTTCTTTCTTTCG AATCGAAACAGGCGGCGTCCTCCCCCCAGACGGCGTCCGCGGTGGCGGTA TTACCTGGAGAATCGCCGGGGGCTCCGGCACCAGCGGCGGTGGGCGGTGG GACAGCGGACGCGGCACCCACCCAACCGCCTACTCTGCAGAAGAGGGTAC GGGGCAACGCCGTGTTTTGGATGTGTCTTGTTGTTCCACCTGGTTTTTTT TTTGTGTTGTGCCTCTGTTGTCGGGGCTCGAAGCACTGTTAATTGTTTTC TGTTTGGGCGCATGATGTGTGTTGCTCTCACCTCCACAGAATTTGCCCCG CGCTTGCCCGGTGTGCCATGACTCTTGCGAGCATGGCGGGATTGCCTTTC CCATGAGACCGATGTCGTGTTGCTAAACACGCGCACACGGCCTGTGTAAT TGAATGGGTTACGTAGTTTCGAGACAAGAATGAGAAGGTGCTATCTGCAA TAGGAGACCGTTTGGCGGCCACGCGAAAGCCGAAAGCACGGGGGAAGACA AGGAATGTTTCCCCAAGTACATTGGGGCGGAAGCTTGCAGAGCGTCTGGT TGCCGGCTTTTTTCTCCACATGAGGAGAATGAGCATTGGCCAATCTCGAA GGCCATTGTTGGCCAATGGTGCTGAGCCGTATGGCAAGGGATAAGTGTCA GTAGTCGCATTCCCGTGTTCTTATCTCGCTGTTTTTTCTTTTCGTGTCTT GAGCAGGGCTCTAGGAGGCTAGGCTGGGGCATGGGTATCGGGTCCAAGCT ATCCGCGGACGAGAAGGCCACCGAAGCGGCAGCAGCGCTAGCGGCCGAAA AGGCGGCAGCGGAGAAGGCAGAGGCCGACAAGGCCGCCGCTGCAAAGAAG GCAGCGGACGAGGCTGCTGCTGCTGCGGCGGTGGCGGCGGCACCGCCGAA GGCGCTCGAGGTTGCTCCTGCCGACCAGAGCAACGCAACGAGTGCAGTCA GCGATTTGGCCACCGCCGATGCTGTGCAAGATGGCGCCGTTAAAAAGTCT GCTGCTGCGAAAAAGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTACTGC TGGGAAAGAAGACTCCAGTGCCAGAGGCGCATCCGCCGACGGCGCTGCGG CTTCCTTGCCACCGTCGTCTTCCAGCAGCGGCGTTGACCAGACGGCAGCG GCAAGCCCGCCAACGCCGATGGCGACGGGAGCAACGCCGAAGACGCCCGG CGAAGCAGCGGGCCGTCGAAAGAAGGACGGCGGCGCGGCGGCGGCGAGTG CGGGTAGCGCTGGAAGCTTGAAGCGGAGGCCGCCGCAGCAGCCGCGAGAT GAAGACGTTGCCAGCGGTGGCAAGGGAACGGCAACAACAACATCGCCCGC CTTGTCGCCCCCCCCGGCGGTTGTCTCTCCGCGGACGCTGTCGTCGTCAA CGCCGCCCTCGGCTGATGCCACCACGGGCGGCGCTCGGAAGGCCATGAAA GAATTCGGCAACGCGGCGAACAGTGCTGTCGACGGCGGCAGCGGCGGCGT AAGAAGACGGCGGGAGAGAGGCAGCGGGGAGATTAGGGTGGTGGGGAGCG GGGTGGGCGGGAAGGAGCAACAACAACGGATGAAGCGAGCGGGCTCTGAT TCCGGCAAGAAGGCCAAGGAAGGGCTGGCGCCAGGGCCGCAGAAGCGTGC GTCGAGCGATGGGATCGTGGAGGGCTCCCCGACCAAAACCGGTCAGTGTG TGTGCGTGTGTCAATTTTGTGTCAGGATCGACCGCGCTGCTGATCATTAT GTGTATGAGTGACGTTCCGGCCGGGGGCATAGCATTGTTTCGATCCCATT GCCTGCTGATGTGGAGCATCCAAGTCCCGTCCAACGCCACGACAGTTGTG CCTACCCAGTCTGAGTTTATTGTTTTCTCCACGAGAATCGGGTAACCATC TGGCCCCCCGCCAAGCACGTCTTCGGAGGTCCTAGTTGCTGATCGTCTCT GAACACACAGACGGGAAACGGAAATTGAGAGAAATTGTTGCAGGTCTTGT GGGATGCCATGGGTACGAAGATAAAGATATTAATCCCCGACCCCTTGCGG CTCAAAACAACGGTGCCCACACCATCCCACTCTAAACAATCTAACGCTGG AACAAACCGGTTATCAACGGTGAACGTTCCGTCTCACCATTCATCTCTTG TGTATTTTGTGTAAAACGCCTCGCGTGTCGTGTCGGTTTTTTTTTGCAAT AGGAACAACAGCACAGGCAGCAGCAGCAGCAGCAGCTGCCGCAAGTGGAT CCCCGAAAACCCCGCAGCCTCCGGCACCGTGCCCGCGAAAGCGCGAGAAC GACGGCCCCGCCACCGCTGCGACAACGGCCGGTGGGTCGTCGAAAGACCA GCGCCGGAGAGAACGGGAGCGGCTGATGCACATGTCGGAGCGGCGTAACA AGAAGAGCGGAGGGGGTGGAGGCGGCGCTGGGGGCAGCGAGGACCATCCC GTGGCTGACGTCGATCTGAAGCGGGTGGGGGAGGAAACTGCGAGGCGTGG GGGGGATGGCCGGGCGTCAGCACCAAACGGCGGTCACCACGGCAAGGAAA AACGCCCCCGTCGGAGCGCCGATGCCGCGGATTCGGGGGTGAAGACACCC GAGGCGCCGGCGGCCCCCACCTCGAAGGAGGGGCATGCGAAGGCTGCAGA TGGCGGTAGCGCTCTGATGACGGCAGTGGCCGGAGCGGCCGCCACCGGCG GGGCAGGAGCAGCAGGCGGCCGCGCGAAGGAGACCAGCAGGGCAGCAGCG CGGCAGTGCAACCCATCGGGGACGGAGCTCCGGCGACTCACGTCCGGAAC GGAGGTCGAGGAGCGGCGGACGCTTGCCGCCCTGCGCGACCTAGAGGCTT GTCTGGAGGAAAGCAGGATAGCGGCTGCTGACGCCGCGAGTACGCCGGTG GCGGAGGCGGAGAGGACTCTAGTCGTCGCCAACGCGAGCGCCTCACAAGC AAAGACCGGGGAAGCGAACAACCCCGGTACGGAGAAGATCATCGCTAGCA GCAGCAGCAGCAGCAGCGCCAACGACGACGGCGGAACCCTCACGCCTGCC GTCGCGGCCGCCGTTGCGGCCCTCCCGGCGGAGCTGGCGACGGCGTTGGG GCTCGCGGAAGGCGACGGAAAGCGGGGTGAAGGCGGCGGCAGCAACCAGC CGACGGTCGCCGGCGCCGGCGCCGGCGGTGTCGGGTTGGACCACGAAGAA AGGAACGGCTTCTCTCCCCCGCACGTGGACCTCGTCCGGCAGGCGAGAGC GACCGTGGAATTCCGGGTGGCTCGCCGGAGGTACAAGGGAGAGCTGAAGA TTGCAGCTGCCGCGGCCTCGCTCGCCTGCGGCAGTCTTCCAAGCCCTCCT GTAGAGAAAGCGGCGGGAGCAGCGGCGGCAGCGGCAGCGACACGTTCTGA GCATGGCGGGCCGGACGAAGCATCAGCCGAACGTCTTCGCGGCCCGTCTC AGTCACCGCCTGGCGTCGTGACGACTGAACCCTCGGCCGCTTCCGCTGCT GCCAGGAAAGGGCCGAGTGGCCTCCGCACTCGGGTGCCCACCGGCGCGCC GGTGTCCCACCTCTTCCGCGCCAGGGTGGATGCGGCGCCGGGGGGAGTCC CCAAGTCCGGCCGCGACGTGGCGATCGCCAGGGTCATGCGAGAGAACCAG GCGAGAGCTGTCGCGGCGCAGGCCGAGTTAGATGGGCGACTGCTGCGCCT GCCGGGGAACACGCCGCCTTTGTCGGGTGAAGCAGCAGCAGCAGCAGCGC AAGCTTCGGCCCCTGGGACGGCGGCGTGGAGCGCGTCAGAGATCCACGCG GCGCGCCTTCGGGAGCTAAAACCCGTCATGACCCGGGCCATCCGGCGGCG GCGCCTGGAGCTGCGGCGGCGCTGGGAGAAGCTCGGCGACCAGTACGCAG GCCTCCACAACGCGTGGCACGTCGACATGCTCCGCTGGGAGGAGAAGATG GAGGAGGAGGAGGCCAAGGAAGCCGCCTCCGCGTCCGGCGGCGCCGGAGA GGGCGACGACGGGGACGCGGCGTGGGGGCCAGTCGGCGGCGGTGGCGGCG GCGGCGGCGGCAGCGGCAGCGGAGGGGGCCACGGCGCCAGTCTCAGGAGC GAGCGCAGGGGGGGGCGGCGGCTTAGCGACGTGGTCCGCTCGGACTACGA AGAGGCCGAGGTGGTGAAGAAGTTCGAGGACAAGCACAAGGAGGAGGAGC GCATCCGGAAGGGGGCCGTGGAGGTGCCGTCCATGCTGACCGCGGTGGAG CGGCGGCAGCTGCCGGAGTACCGGGACTCGTGGAACTCGAGGGGCACGAC GGACGGGCTCCCGGCGAGGTGCCGCGGCCTCCCCGCGGACGCGGCGTGCC CGGCCGGGTGCAACTGCCCCGCGGCGGTCGAGGCCAAGCGGAAGCTATCG AACCTCTGGACGGACGTCGAGAAGTGCATCTTCCTGGACAAGTTCCTGCA CCACCCGAAGAACTTCATGCGGATAGCCTCGTTCCTGCCCAGGAAGTCGC CCGAAGACGTGGTCCAGTTCTACTACGACAGCAAGACGTCGATCGACTAC AAGACCCTGCTCAAGGAGGCCGTCAACCGCAACAAGGTTAGTCAACGAAC CACCTTCTGCGGTAGCTTTTTTTTTTTTAGGTGGTGGTCGTTGCTGCTGT ACCTTTTTTGGATGCTGTGGCTGAATTGTTTTTATTATTTGTGTGGTGGT GGCCATGTGCTGCTACGCCGTTTTGAGGTTGCTCAGAGGTGAATCGTCTT TCCCCTGCCGGGCGTTGCCCTTGGTGGAGGGACGATGACGAAGTGAGTCC CTCTCCACAACAGGCTGAGAACCATTGCTCGAGACTTGCGAATCGCTTGC AGCGCGCGCGAAGTTAGTATCGCCGGAAGAAAACGAACATGCACACACAG GGATAGCCATCACGCCGCCCTGACGCGTTACCATCAAGCAAGCGTCGCCG CGGTTGGTGTTGTTTCACCGGCTTGTGGGAGTCAATGGCTATCGTTGCTC TCCTTCTGGTGTACTACCCCGCCCGCCCACACACACAGAGATCCCTTCAG GAGCACTTTCTGTTTTCGAATCGCACGTCTTTTCACTTGTCAGCCGGTGA GAATGCCGTATTTTCATTGGTCCGCCGGTGTACATAGCGCGGTCGAACAA AAAAACAAACACACGCTACCGCACCCTCCAAACCCAGGGCTACGCGGGGC AATGGAACGCCACCTTCAAGGCGATCCGCAGCGTCGGCGCCAAGGTGTCC ATCGACGAGGACGGCCAGCCTTTCTTCCCGGTGCCTCAGCGGGACGACTC CTTCGCGACGGCCGACATGCACCCGCCCTCGAGGACCCGCCCGCTGCTCG ACATCCAGCGCGAGGCCCTGTCTCTGGCGTGCTCCGGGGAGGTCGTTGGG GCGGCCGCGGCGGCGGCAAAGACGCAGGTCTCCGAGGCGCTGCTGCGCCG TAGCGCGGCGGCGGAGGCGGTGGGGGCAGGTATCCCGCAACAGCGCCACG AGTCGCCGACAGAGGGCTTGGACCTGCTGAGCCCGGCGGAGGTGAAGGCC GCGGCCGCCCGACTTCCACCGGCGGCGATCAACGTGGCGGCCTACCGCCT GTGCATGCGGTCGTTCCCGCCACCCGACGACGGCGACGGCGACGGAGGCG GCGTCATCTACGCCGCCCGGGATGTCGCCGCGGCCGCGGGCGGGGCGGGG TCCGGAGCGGGGAGGTTCGACGAGGGCGCGATCATGCCGTACCGGTTCTC GGACGCGAGGGTTACCGGCGTTCCCCATGAGCTGGCGCCGCCACGCTCGG CTTCTGCGACGGCGGCGGCGGCGGCGGCGGCGGTAGCGGGGGGCATCGCC GGGGACGGCGTTGACGCTCCCTACGAACCGGATGGTCTCAGCGGCGGCGG CGGCGGTGGCATCCGCGCCCTGCACGATGGCGGCAGAGGGGGCAGGGGAG GGAGGAGGATGGGCGGGCCAGGGTCCCAGTCATCATCGGCGTATCTGGCG GCGGCTGCAGCACGGGCCGTTGGGGAGGAGGCCAACGGCAACGACGACGA GTACGGGGATGACGAGTTCCAGGGCAGGGGAGGGGCGGGGCGGGGGTTGG GTCGGAGAGGCGGAATGTCGCCGGGAGGGGAAGGCGGGGCCGGCAGGGGG GGTAAGGCGAAGCGGGGCGCGCCCAGGAGGAAGTCGGTGGTGGCCGGCGG GCAGGAGGACGGGGGGGGCGGGGGGAGCACGCTGGGGTCGGCCGCCGGGG CGCAGCAGAGGCCGATCTCCACCAAGGGGGCCAAGTGGACGGAGGAGGAG AGGGAGGCGTTCTTCAGCATCCACGACGCGCGGCCAGGGAACAAGGAGTG GGAACGGTACGCCGAGCTGATCCACACCAAGACGCCCACGCAGGTGAAGA CGTTCTACACGAACTCGAAGAACAAGAACCTGCTCGAGGCTGAGGCAATC ACGGTCCGGAAGGACAACCTTAACCGGAGGGACAGGCAGACGGCCGAAGT CTCGGCGATT
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7474:271..7380-

>mRNA_E_fasciculatus_S2_contig7474.15640.1 ID=mRNA_E_fasciculatus_S2_contig7474.15640.1|Name=mRNA_E_fasciculatus_S2_contig7474.15640.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=4848bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7474:271..7380- (Ectocarpus fasciculatus EfasUO2)
GTGCCATGCGCCGCCACAGCATGGTCGAGGGTCGCGAACGCCACCTCCCC
GGAGAAGGACGATGCAGGAGGGAAGGGTGTTACGACTGGCGTAGCCAAGG
GTTCGCCACCGACCCCGTCCGTGGTCGGCGCTGGCGGCGCCACGCCTGCC
GCTGCGGGCGGTAAACCCCGCTTGGACTGGGGCATGGGAGCCGTTTCGGC
GGGCTTCGTGCCCTCTTATTCCGCGGAGGCGGCGTCCTCCCCCCAGACGG
CGTCCGCGGTGGCGGTATTACCTGGAGAATCGCCGGGGGCTCCGGCACCA
GCGGCGGTGGGCGGTGGGACAGCGGACGCGGCACCCACCCAACCGCCTAC
TCTGCAGAAGAGGGGCTCTAGGAGGCTAGGCTGGGGCATGGGTATCGGGT
CCAAGCTATCCGCGGACGAGAAGGCCACCGAAGCGGCAGCAGCGCTAGCG
GCCGAAAAGGCGGCAGCGGAGAAGGCAGAGGCCGACAAGGCCGCCGCTGC
AAAGAAGGCAGCGGACGAGGCTGCTGCTGCTGCGGCGGTGGCGGCGGCAC
CGCCGAAGGCGCTCGAGGTTGCTCCTGCCGACCAGAGCAACGCAACGAGT
GCAGTCAGCGATTTGGCCACCGCCGATGCTGTGCAAGATGGCGCCGTTAA
AAAGTCTGCTGCTGCGAAAAAGCCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTACTGCTGGGAAAGAAGACTCCAGTGCCAGAGGCGCATCCGCCGACGGC
GCTGCGGCTTCCTTGCCACCGTCGTCTTCCAGCAGCGGCGTTGACCAGAC
GGCAGCGGCAAGCCCGCCAACGCCGATGGCGACGGGAGCAACGCCGAAGA
CGCCCGGCGAAGCAGCGGGCCGTCGAAAGAAGGACGGCGGCGCGGCGGCG
GCGAGTGCGGGTAGCGCTGGAAGCTTGAAGCGGAGGCCGCCGCAGCAGCC
GCGAGATGAAGACGTTGCCAGCGGTGGCAAGGGAACGGCAACAACAACAT
CGCCCGCCTTGTCGCCCCCCCCGGCGGTTGTCTCTCCGCGGACGCTGTCG
TCGTCAACGCCGCCCTCGGCTGATGCCACCACGGGCGGCGCTCGGAAGGC
CATGAAAGAATTCGGCAACGCGGCGAACAGTGCTGTCGACGGCGGCAGCG
GCGGCGTAAGAAGACGGCGGGAGAGAGGCAGCGGGGAGATTAGGGTGGTG
GGGAGCGGGGTGGGCGGGAAGGAGCAACAACAACGGATGAAGCGAGCGGG
CTCTGATTCCGGCAAGAAGGCCAAGGAAGGGCTGGCGCCAGGGCCGCAGA
AGCGTGCGTCGAGCGATGGGATCGTGGAGGGCTCCCCGACCAAAACCGGT
CAGTGTGCAGCAGCAGCAGCAGCAGCTGCCGCAAGTGGATCCCCGAAAAC
CCCGCAGCCTCCGGCACCGTGCCCGCGAAAGCGCGAGAACGACGGCCCCG
CCACCGCTGCGACAACGGCCGGTGGGTCGTCGAAAGACCAGCGCCGGAGA
GAACGGGAGCGGCTGATGCACATGTCGGAGCGGCGTAACAAGAAGAGCGG
AGGGGGTGGAGGCGGCGCTGGGGGCAGCGAGGACCATCCCGTGGCTGACG
TCGATCTGAAGCGGGTGGGGGAGGAAACTGCGAGGCGTGGGGGGGATGGC
CGGGCGTCAGCACCAAACGGCGGTCACCACGGCAAGGAAAAACGCCCCCG
TCGGAGCGCCGATGCCGCGGATTCGGGGGTGAAGACACCCGAGGCGCCGG
CGGCCCCCACCTCGAAGGAGGGGCATGCGAAGGCTGCAGATGGCGGTAGC
GCTCTGATGACGGCAGTGGCCGGAGCGGCCGCCACCGGCGGGGCAGGAGC
AGCAGGCGGCCGCGCGAAGGAGACCAGCAGGGCAGCAGCGCGGCAGTGCA
ACCCATCGGGGACGGAGCTCCGGCGACTCACGTCCGGAACGGAGGTCGAG
GAGCGGCGGACGCTTGCCGCCCTGCGCGACCTAGAGGCTTGTCTGGAGGA
AAGCAGGATAGCGGCTGCTGACGCCGCGAGTACGCCGGTGGCGGAGGCGG
AGAGGACTCTAGTCGTCGCCAACGCGAGCGCCTCACAAGCAAAGACCGGG
GAAGCGAACAACCCCGGTACGGAGAAGATCATCGCTAGCAGCAGCAGCAG
CAGCAGCGCCAACGACGACGGCGGAACCCTCACGCCTGCCGTCGCGGCCG
CCGTTGCGGCCCTCCCGGCGGAGCTGGCGACGGCGTTGGGGCTCGCGGAA
GGCGACGGAAAGCGGGGTGAAGGCGGCGGCAGCAACCAGCCGACGGTCGC
CGGCGCCGGCGCCGGCGGTGTCGGGTTGGACCACGAAGAAAGGAACGGCT
TCTCTCCCCCGCACGTGGACCTCGTCCGGCAGGCGAGAGCGACCGTGGAA
TTCCGGGTGGCTCGCCGGAGGTACAAGGGAGAGCTGAAGATTGCAGCTGC
CGCGGCCTCGCTCGCCTGCGGCAGTCTTCCAAGCCCTCCTGTAGAGAAAG
CGGCGGGAGCAGCGGCGGCAGCGGCAGCGACACGTTCTGAGCATGGCGGG
CCGGACGAAGCATCAGCCGAACGTCTTCGCGGCCCGTCTCAGTCACCGCC
TGGCGTCGTGACGACTGAACCCTCGGCCGCTTCCGCTGCTGCCAGGAAAG
GGCCGAGTGGCCTCCGCACTCGGGTGCCCACCGGCGCGCCGGTGTCCCAC
CTCTTCCGCGCCAGGGTGGATGCGGCGCCGGGGGGAGTCCCCAAGTCCGG
CCGCGACGTGGCGATCGCCAGGGTCATGCGAGAGAACCAGGCGAGAGCTC
TGCGGCGGCGCTGGGAGAAGCTCGGCGACCAGTACGCAGGCCTCCACAAC
GCGTGGCACGTCGACATGCTCCGCTGGGAGGAGAAGATGGAGGAGGAGGA
GGCCAAGGAAGCCGCCTCCGCGTCCGGCGGCGCCGGAGAGGGCGACGACG
GGGACGCGGCGTGGGGGCCAGTCGGCGGCGGTGGCGGCGGCGGCGGCGGC
AGCGGCAGCGGAGGGGGCCACGGCGCCAGTCTCAGGAGCGAGCGCAGGGG
GGGGCGGCGGCTTAGCGACGTGGTCCGCTCGGACTACGAAGAGGCCGAGG
TGGTGAAGAAGTTCGAGGACAAGCACAAGGAGGAGGAGCGCATCCGGAAG
GGGGCCGTGGAGGTGCCGTCCATGCTGACCGCGGTGGAGCGGCGGCAGCT
GCCGGAGTACCGGGACTCGTGGAACTCGAGGGGCACGACGGACGGGCTCC
CGGCGAGGTGCCGCGGCCTCCCCGCGGACGCGGCGTGCCCGGCCGGGTGC
AACTGCCCCGCGGCGGTCGAGGCCAAGCGGAAGCTATCGAACCTCTGGAC
GGACGTCGAGAAGTGCATCTTCCTGGACAAGTTCCTGCACCACCCGAAGA
ACTTCATGCGGATAGCCTCGTTCCTGCCCAGGAAGTCGCCCGAAGACGTG
GTCCAGTTCTACTACGACAGCAAGACGTCGATCGACTACAAGACCCTGCT
CAAGGAGGCCGTCAACCGCAACAAGGGCTACGCGGGGCAATGGAACGCCA
CCTTCAAGGCGATCCGCAGCGTCGGCGCCAAGGTGTCCATCGACGAGGAC
GGCCAGCCTTTCTTCCCGGTGCCTCAGCGGGACGACTCCTTCGCGACGGC
CGACATGCACCCGCCCTCGAGGACCCGCCCGCTGCTCGACATCCAGCGCG
AGGCCCTGTCTCTGGCGTGCTCCGGGGAGGTCGTTGGGGCGGCCGCGGCG
GCGGCAAAGACGCAGGTCTCCGAGGCGCTGCTGCGCCGTAGCGCGGCGGC
GGAGGCGGTGGGGGCAGGTATCCCGCAACAGCGCCACGAGTCGCCGACAG
AGGGCTTGGACCTGCTGAGCCCGGCGGAGGTGAAGGCCGCGGCCGCCCGA
CTTCCACCGGCGGCGATCAACGTGGCGGCCTACCGCCTGTGCATGCGGTC
GTTCCCGCCACCCGACGACGGCGACGGCGACGGAGGCGGCGTCATCTACG
CCGCCCGGGATGTCGCCGCGGCCGCGGGCGGGGCGGGGTCCGGAGCGGGG
AGGTTCGACGAGGGCGCGATCATGCCGTACCGGTTCTCGGACGCGAGGGT
TACCGGCGTTCCCCATGAGCTGGCGCCGCCACGCTCGGCTTCTGCGACGG
CGGCGGCGGCGGCGGCGGCGGTAGCGGGGGGCATCGCCGGGGACGGCGTT
GACGCTCCCTACGAACCGGATGGTCTCAGCGGCGGCGGCGGCGGTGGCAT
CCGCGCCCTGCACGATGGCGGCAGAGGGGGCAGGGGAGGGAGGAGGATGG
GCGGGCCAGGGTCCCAGTCATCATCGGCGTATCTGGCGGCGGCTGCAGCA
CGGGCCGTTGGGGAGGAGGCCAACGGCAACGACGACGAGTACGGGGATGA
CGAGTTCCAGGGCAGGGGAGGGGCGGGGCGGGGGTTGGGTCGGAGAGGCG
GAATGTCGCCGGGAGGGGAAGGCGGGGCCGGCAGGGGGGGTAAGGCGAAG
CGGGGCGCGCCCAGGAGGAAGTCGGTGGTGGCCGGCGGGCAGGAGGACGG
GGGGGGCGGGGGGAGCACGCTGGGGTCGGCCGCCGGGGCGCAGCAGAGGC
CGATCTCCACCAAGGGGGCCAAGTGGACGGAGGAGGAGAGGGAGGCGTTC
TTCAGCATCCACGACGCGCGGCCAGGGAACAAGGAGTGGGAACGGTACGC
CGAGCTGATCCACACCAAGACGCCCACGCAGGTGAAGACGTTCTACACGA
ACTCGAAGAACAAGAACCTGCTCGAGGCTGAGGCAATCACGGTCCGGAAG
GACAACCTTAACCGGAGGGACAGGCAGACGGCCGAAGTCTCGGCGATT
back to top