mRNA_E_fasciculatus_S2_contig7441.15617.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7441.15617.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI7_9PHAE) HSP 1 Score: 635 bits (1638), Expect = 3.590e-218 Identity = 414/463 (89.42%), Postives = 422/463 (91.14%), Query Frame = 1
Query: 25 EEDVEDGEINNGFLGEAEMENRKTLAAAYGDDVSWVEAVLLGAKHLAPAGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRLEAALVHKVTALLAGGGDDKNGRHDPAETLVETLAEAEADGVDVARWLGHGRSSIRGRTPLMEAARQDQTGCCSVLAEAACAQGAGLNAGNETQGRNSALHYACHEGSGGSVCELLVRGADPRLRNRDGETALQAALANGQAECADLVRDFLRRPTFEPEPQSGEIFTTAATTAAGVAPPADPALPYRHGKSGSPQEAEKVGNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGGGVAGVAPEVRRANAVFCLGRRRRRLCRGFGVRPGRGLXXXXXTAAAEIGLGARRGARLHATNPCPGTAMEAFVLWSIADGQDPFRGEAGGDEGGAEDEFGEAKGKGEDRGAADVWLEHYA 1413
EEDVEDGEINNGFLGEAEME+RKTLAAAYGD+VSWVEAVLLGAKHLAPA NAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RLEAALVHKVTALLAGGG+DKNG+HDPAE LVETLAEAEADGVDVARWLGHGRSSIRGRTPLMEAAR DQTGCCSVLAEAACAQGAGLNAGNETQGRNSALHYACHEGSGGSVCELLVRGADPRLRN DGETALQAALANGQAECADLVRDFLRRPTFEP+PQSG++FTTA T AGVAPPADPA P RHG SGSP AEK G AGXXXXXXXXXXXXXXXXXXXXXXXXXX IGGGVAGVAPEVRRANAVFCLGRRRRRLCRGFGVRPGRGLXXXXX AEIGLGARRGARLHATNPCPGTAMEAFVLWSIADGQDPFR EAGGDEG AEDEFGEA+GK EDRGAADVWLEHYA
Sbjct: 6 EEDVEDGEINNGFLGEAEMEDRKTLAAAYGDEVSWVEAVLLGAKHLAPATNAATSGNGDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--ARLEAALVHKVTALLAGGGEDKNGQHDPAEALVETLAEAEADGVDVARWLGHGRSSIRGRTPLMEAARMDQTGCCSVLAEAACAQGAGLNAGNETQGRNSALHYACHEGSGGSVCELLVRGADPRLRNSDGETALQAALANGQAECADLVRDFLRRPTFEPDPQSGDLFTTA--TVAGVAPPADPAFPRRHGTSGSPLVAEKAGVAGXXXXXXXXXXXXXXXXXXXXXXXXXX---------IGGGVAGVAPEVRRANAVFCLGRRRRRLCRGFGVRPGRGLXXXXXXXXAEIGLGARRGARLHATNPCPGTAMEAFVLWSIADGQDPFRSEAGGDEG-AEDEFGEARGKEEDRGAADVWLEHYA 454
BLAST of mRNA_E_fasciculatus_S2_contig7441.15617.1 vs.
Match: Ankyrin (repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ9_ECTSI) HSP 1 Score: 603 bits (1556), Expect = 1.380e-206 Identity = 408/471 (86.62%), Postives = 414/471 (87.90%), Query Frame = 1
Query: 1 MDAAEVEEEEDVEDGEINNGFLGEAEMENRKTLAAAYGDDVSWVEAVLLGAKHLAPAGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRLEAALVHKVTALLAGGGDDKNGRHDPAETLVETLAEAEADGVDVARWLGHGRSSIRGRTPLMEAARQDQTGCCSVLAEAACAQGAGLNAGNETQGRNSALHYACHEGSGGSVCELLVRGADPRLRNRDGETALQAALANGQAECADLVRDFLRRPTFEPEPQSGEIFTTAATTAAGVAPPADPALPYRHGKSGSPQEAEKVGNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGGGVAGVAPEVRRANAVFCLGRRRRRLCRGFGVRPGRGLXXXXXTAAAEIGLGARRGARLHATNPCPGTAMEAFVLWSIADGQDPFRGEAGGDEGGAEDEFGEAKGKGEDRGAADVWLEHYA 1413
MDA EEEEDVEDGEINNGFLGEAEMENRKTLAAAYGD+VSWVEAVLLGAKHLAPA NAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KN RHDPAETLVETLAEAEADGVDVARWL HGRSSIRGRTPLMEAARQDQTGCCSVLAEAACAQGAGLNAGNETQGRNSALHYACHEGSGGSVCELLVRGADPRLRNRDGETALQAALANGQAECADLVRDFLRRPTFEPEPQSG++F TA T AGVAPPADPALP RHGKSGSPQEAEK A XXXXXXXXXXXXXXXXXXXXXXX IG GVAGVAPEVRRANAVFCLGRRRRRLCRGFGVRPGRGLXXXXXTAAAEIGLGARRGARLHATNPCPGTAMEAFVLWSIADGQDPFR EAGG+EG AEDEFG+ +GKGEDRGAADVWLEHYA
Sbjct: 1 MDA---EEEEDVEDGEINNGFLGEAEMENRKTLAAAYGDEVSWVEAVLLGAKHLAPASNAAASEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KNRRHDPAETLVETLAEAEADGVDVARWLWHGRSSIRGRTPLMEAARQDQTGCCSVLAEAACAQGAGLNAGNETQGRNSALHYACHEGSGGSVCELLVRGADPRLRNRDGETALQAALANGQAECADLVRDFLRRPTFEPEPQSGDLFATATT--AGVAPPADPALPRRHGKSGSPQEAEKARAA--------XXXXXXXXXXXXXXXXXXXXXXXKRNNTIGEGVAGVAPEVRRANAVFCLGRRRRRLCRGFGVRPGRGLXXXXXTAAAEIGLGARRGARLHATNPCPGTAMEAFVLWSIADGQDPFRSEAGGEEG-AEDEFGQGRGKGEDRGAADVWLEHYA 456
BLAST of mRNA_E_fasciculatus_S2_contig7441.15617.1 vs.
Match: Serine/threonine-protein (phosphatase 6 regulatory ankyrin repeat subunit C (Fragment) n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8MG88_CULPI) HSP 1 Score: 52.0 bits (123), Expect = 7.760e-5 Identity = 29/61 (47.54%), Postives = 36/61 (59.02%), Query Frame = 1
Query: 610 RNSALHYACHEGSGGSVCELLVRGADPRLRNRDGETALQAALANGQAECADLV-----RDF 777
R LHYA EG+ +V ELL +G + +RDGETAL A+ANGQ E D + RDF
Sbjct: 28 RADTLHYAAAEGNVEAVHELLAKGVNVYRTDRDGETALHVAIANGQREIYDALVGVYERDF 88 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7441.15617.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7441.15617.1 >prot_E_fasciculatus_S2_contig7441.15617.1 ID=prot_E_fasciculatus_S2_contig7441.15617.1|Name=mRNA_E_fasciculatus_S2_contig7441.15617.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=473bp MDAAEVEEEEDVEDGEINNGFLGEAEMENRKTLAAAYGDDVSWVEAVLLGback to top mRNA from alignment at E_fasciculatus_S2_contig7441:3464..6939+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7441.15617.1 ID=mRNA_E_fasciculatus_S2_contig7441.15617.1|Name=mRNA_E_fasciculatus_S2_contig7441.15617.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3476bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7441:3464..6939+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7441:3464..6939+ >mRNA_E_fasciculatus_S2_contig7441.15617.1 ID=mRNA_E_fasciculatus_S2_contig7441.15617.1|Name=mRNA_E_fasciculatus_S2_contig7441.15617.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1419bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7441:3464..6939+ (Ectocarpus fasciculatus EfasUO2)back to top |