mRNA_E_fasciculatus_S2_contig7438.15610.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7438.15610.1
Unique NamemRNA_E_fasciculatus_S2_contig7438.15610.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7438.15610.1 vs.
Match: Oxidoreductase, (NAD-binding, myo-inositol 2-dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHR9_ECTSI)

HSP 1 Score: 588 bits (1515), Expect = 5.830e-211
Identity = 288/293 (98.29%), Postives = 292/293 (99.66%), Query Frame = 2
Query:    5 QGMEVITDPDVEAVWICSPSQFHADQIKAAAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRRFDPSFSRLQAMIEAGEVGTPVSAVLQSRDPAAPPFDYVKGGGGLFKDMAIHDLDIARWLMGSCGTNEPVRVYATGACNVDKSILELKDSNPSEAIDTANILIEFESGSTATIQVCRKATYGYDQRVEFFGTDGLVKHENHFPSAVQKWTGTSVQQADLPHAFFMTRYADAYKNETRAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEITA 883
            +GMEVI DPDVEAVWICSPSQFHADQIKA+AKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRRFDPSFSRLQAMIEAGEVGTPVSAVLQSRDPAAPPFDYVKGGGGLFKDMAIHDLDIARWLMGSCGTNEPVRVYATGACNVDKSILELKDSNPSEAIDTANILIEFESGSTATIQVCRKATYGYDQRVEFFGTDGLVKHENHFPSAVQKWTGTSVQQADLPHAFFMTRYADAYKNETRAFCKILEEGG+VTPSGEDGLAALKMAMACDKSLKEGRPV+LSEITA
Sbjct:   79 EGMEVINDPDVEAVWICSPSQFHADQIKASAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRRFDPSFSRLQAMIEAGEVGTPVSAVLQSRDPAAPPFDYVKGGGGLFKDMAIHDLDIARWLMGSCGTNEPVRVYATGACNVDKSILELKDSNPSEAIDTANILIEFESGSTATIQVCRKATYGYDQRVEFFGTDGLVKHENHFPSAVQKWTGTSVQQADLPHAFFMTRYADAYKNETRAFCKILEEGGDVTPSGEDGLAALKMAMACDKSLKEGRPVNLSEITA 371          
BLAST of mRNA_E_fasciculatus_S2_contig7438.15610.1 vs.
Match: Oxidoreductase (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z516_9STRA)

HSP 1 Score: 505 bits (1300), Expect = 3.460e-178
Identity = 244/288 (84.72%), Postives = 264/288 (91.67%), Query Frame = 2
Query:   14 EVITDPDVEAVWICSPSQFHADQIKAAAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRRFDPSFSRLQAMIEAGEVGTPVSAVLQSRDPAAPPFDYVKGGGGLFKDMAIHDLDIARWLMGSCGTNEPVRVYATGACNVDKSILELKDSNPSEAIDTANILIEFESGSTATIQVCRKATYGYDQRVEFFGTDGLVKHENHFPSAVQKWTGTSVQQADLPHAFFMTRYADAYKNETRAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEI 877
            EVI  PDVEAVWICSPSQFHADQIK  AKAGKHIFCEKPIATDLAGTIEA++VAKDCGVKLMTAFQRRFDPSF+RLQ +I AGEVG PVSAVLQSRDP APPF YVKGGGGLFKDMAIHDLDIARWLMGSCG NEPV+VYATGACNVD++ILELK SNPSEAIDTANIL+EFESGSTATIQVCRKATYGYDQRVEFFGT+GLVKH+N FP+ V  W G SV+ AD  H FFMTRYADAYKNET+AFC+IL+ GGEV+PSG+DG AAL+MAMACDKSLKEGRPV +SE+
Sbjct:   83 EVIHHPDVEAVWICSPSQFHADQIKTCAKAGKHIFCEKPIATDLAGTIEAIKVAKDCGVKLMTAFQRRFDPSFARLQKVIAAGEVGKPVSAVLQSRDPGAPPFAYVKGGGGLFKDMAIHDLDIARWLMGSCGKNEPVQVYATGACNVDQAILELKGSNPSEAIDTANILVEFESGSTATIQVCRKATYGYDQRVEFFGTEGLVKHDNVFPNTVSVWDGKSVRHADAIHNFFMTRYADAYKNETKAFCEILKSGGEVSPSGDDGRAALEMAMACDKSLKEGRPVKISEV 370          
BLAST of mRNA_E_fasciculatus_S2_contig7438.15610.1 vs.
Match: Oxidoreductase (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N2_9STRA)

HSP 1 Score: 494 bits (1272), Expect = 5.100e-174
Identity = 235/288 (81.60%), Postives = 262/288 (90.97%), Query Frame = 2
Query:   14 EVITDPDVEAVWICSPSQFHADQIKAAAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRRFDPSFSRLQAMIEAGEVGTPVSAVLQSRDPAAPPFDYVKGGGGLFKDMAIHDLDIARWLMGSCGTNEPVRVYATGACNVDKSILELKDSNPSEAIDTANILIEFESGSTATIQVCRKATYGYDQRVEFFGTDGLVKHENHFPSAVQKWTGTSVQQADLPHAFFMTRYADAYKNETRAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEI 877
            +VI  PDV+AVWICSPSQFHADQIKA A+AGKHIFCEKPIATDLAGT+EA+QVAKDCGVKLMTAFQRRFDPSF+RLQ  +  GEVG P+SAVLQSRDPA PPF YVKGGGGLFKDMAIHDLDIARWLMGSCG NEPV++YATGACNVDK+ILELKDSNPSEAIDTANILIEFESGSTATIQVCR+ATYGYDQRVE FGT+GLVKHEN FP+ V+KW G +V++AD  H FFMTRYADAYKNET+AFC +L+ GGEV+PSG+DG  AL+MAMACD SL+ GRPV +SE+
Sbjct:   69 DVINHPDVQAVWICSPSQFHADQIKACARAGKHIFCEKPIATDLAGTLEAIQVAKDCGVKLMTAFQRRFDPSFARLQKAVADGEVGRPISAVLQSRDPAPPPFAYVKGGGGLFKDMAIHDLDIARWLMGSCGKNEPVKIYATGACNVDKAILELKDSNPSEAIDTANILIEFESGSTATIQVCRRATYGYDQRVELFGTEGLVKHENVFPNTVEKWNGDAVRRADPMHNFFMTRYADAYKNETKAFCALLKAGGEVSPSGDDGARALEMAMACDLSLRLGRPVLMSEV 356          
BLAST of mRNA_E_fasciculatus_S2_contig7438.15610.1 vs.
Match: Oxidoreductase (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z446_9STRA)

HSP 1 Score: 494 bits (1273), Expect = 1.490e-173
Identity = 238/288 (82.64%), Postives = 260/288 (90.28%), Query Frame = 2
Query:   14 EVITDPDVEAVWICSPSQFHADQIKAAAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRRFDPSFSRLQAMIEAGEVGTPVSAVLQSRDPAAPPFDYVKGGGGLFKDMAIHDLDIARWLMGSCGTNEPVRVYATGACNVDKSILELKDSNPSEAIDTANILIEFESGSTATIQVCRKATYGYDQRVEFFGTDGLVKHENHFPSAVQKWTGTSVQQADLPHAFFMTRYADAYKNETRAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEI 877
            +VI  PDV+AVWICSPSQFHADQIKA A AGKHIFCEKPIATDLAGTIEA+Q A DCGVKLMTAFQRRFDPSFSRLQ +I AGEVG PVSAVLQSRDP APPF YVKGGGGLFKDMAIHDLDIARWLMGSCG NEPV++YATG+CNVD +ILELK+SNPSEAIDTANIL+EFESGSTATIQVCRKATYGYDQRVEFFGT+GLVKH+N FPS V  W GTSV+ AD  H FFMTRYADAYKNET+AFC+IL+ GG V+PSG+DG AAL+MAMACD SL+ GRPV +SE+
Sbjct:  100 DVINHPDVQAVWICSPSQFHADQIKACAAAGKHIFCEKPIATDLAGTIEAIQYANDCGVKLMTAFQRRFDPSFSRLQKVIAAGEVGKPVSAVLQSRDPGAPPFAYVKGGGGLFKDMAIHDLDIARWLMGSCGKNEPVKIYATGSCNVDPAILELKESNPSEAIDTANILVEFESGSTATIQVCRKATYGYDQRVEFFGTEGLVKHDNVFPSTVSVWDGTSVRHADAIHNFFMTRYADAYKNETKAFCEILKSGGAVSPSGDDGRAALEMAMACDMSLRLGRPVLMSEV 387          
BLAST of mRNA_E_fasciculatus_S2_contig7438.15610.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRG6_9STRA)

HSP 1 Score: 411 bits (1057), Expect = 2.460e-141
Identity = 197/285 (69.12%), Postives = 228/285 (80.00%), Query Frame = 2
Query:    8 GMEVITDPDVEAVWICSPSQFHADQIKAAAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRRFDPSFSRLQAMIEAGEVGTPVSAVLQSRDPAAPPFDYVKGGGGLFKDMAIHDLDIARWLMGSCGTNEPVRVYATGACNVDKSILELKDSNPSEAIDTANILIEFESGSTATIQVCRKATYGYDQRVEFFGTDGLVKHENHFPSAVQKWTGTSVQQADLPHAFFMTRYADAYKNETRAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPV 862
            G EVI  PDV+AVWICSPSQFHADQIK  AKAGKH+FCEKPIATDL GTIEA++VA + G+KLMTAFQRRFDPSF+RL   I  G VG P+SA+LQSRDP+ PPF YVKGGGGLFKDMAIHDLDIARWLMG+ G N+ V+VYATG C +D  I +L+ SNPSEAIDTA I + FE+G   TI VCR+ATYGYDQRVEFFG +G + H+N +P+ V  W G S  + DLPH FFM+RYA+AYKNET AFC+ L+EG   +PSG DG  AL +AMACDKS KE RPV
Sbjct:   81 GDEVINHPDVQAVWICSPSQFHADQIKKCAKAGKHVFCEKPIATDLNGTIEAIKVADEAGIKLMTAFQRRFDPSFARLHKAIAEGSVGEPISAILQSRDPSPPPFSYVKGGGGLFKDMAIHDLDIARWLMGARGKNDVVQVYATGHCFIDPEIKQLEKSNPSEAIDTAFIQLTFENGGNVTINVCRRATYGYDQRVEFFGKEGTLMHDNLYPNNVHLWNGQSTGRIDLPHNFFMSRYAEAYKNETIAFCQTLQEGKAPSPSGHDGKMALVLAMACDKSFKEKRPV 365          
BLAST of mRNA_E_fasciculatus_S2_contig7438.15610.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZW6_9STRA)

HSP 1 Score: 328 bits (842), Expect = 1.300e-108
Identity = 166/291 (57.04%), Postives = 213/291 (73.20%), Query Frame = 2
Query:    5 QGMEVITDPDVEAVWICSPSQFHADQIKAAAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRRFDPSFSRLQAMIEAGEVGTPVSAVLQSRDPAAPPFDYVKGGGGLFKDMAIHDLDIARWLMGSCGTNEPVRVYATGACNVDKSILELKDSNPSEAIDTANILIEFESGSTATIQVCRKATYGYDQRVEFFGTDGLVKHENHFPSAVQKWTGTSVQQADLPHAFFMTRYADAYKNETRAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEI 877
            +  +VI DP+V+AVWICSPSQFHA QI+ AA AGKHIFCEKPIAT+L  T+EAV+   +  VKLMTA QRRFDPSF R++A I   EVGTP+   L SRDPA PPF+YVKGGGG+FKDMAIHDLD++R LMGS    EPV V A G+C++DK+I EL++  P+E  DTA+IL+++E G +A I VCR+A YGYDQR E  GT G+V+ +N +P++V+K+T T    ADLP  FFM+RY DAY+ ET +F   +     V  +G DG+ AL MAMA  +S  + R V +SE+
Sbjct:   76 EASDVINDPEVDAVWICSPSQFHAAQIREAAAAGKHIFCEKPIATNLEETVEAVRYCDEKQVKLMTALQRRFDPSFDRIKAAIANDEVGTPIVVKLCSRDPAPPPFEYVKGGGGIFKDMAIHDLDMSRHLMGS----EPVEVLALGSCHIDKAITELEE--PTERFDTASILVKYEDGKSAIIDVCRQAPYGYDQRAEVLGTKGMVQSDNLYPNSVKKFTSTFTGNADLPFDFFMSRYKDAYRLETLSFIDSVFNEKPVAVTGYDGIMALAMAMAAGESAAQNRWVKISEV 360          
BLAST of mRNA_E_fasciculatus_S2_contig7438.15610.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0U7F2_9STRA)

HSP 1 Score: 325 bits (833), Expect = 9.510e-108
Identity = 162/288 (56.25%), Postives = 205/288 (71.18%), Query Frame = 2
Query:   14 EVITDPDVEAVWICSPSQFHADQIKAAAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRRFDPSFSRLQAMIEAGEVGTPVSAVLQSRDPAAPPFDYVKGGGGLFKDMAIHDLDIARWLMGSCGTNEPVRVYATGACNVDKSILELKDSNPSEAIDTANILIEFESGSTATIQVCRKATYGYDQRVEFFGTDGLVKHENHFPSAVQKWTGTSVQQADLPHAFFMTRYADAYKNETRAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEI 877
            +VI +PDV+AVWICSPS FHADQIK  A AGKH+FCEKPIATDLA TIEA+ +    GVKL TA QRRFDP+F R++  IE GEVG  +   L SRDP+ PPF+YVKGGGG+F DMA+HDLD++R+LMG     EPV + A G+C++DK I+EL+ S   EA DTA  LI++E+G TA I VCR+A YGYDQR E  GT G+++ +N +P+  + +T      AD+P  FFM+RY +AY  ET +FC  L     V  +GEDGL AL M++A D+S  EGR V  SEI
Sbjct:   10 DVIENPDVDAVWICSPSSFHADQIKRCAAAGKHVFCEKPIATDLAETIEAINLCNQAGVKLFTALQRRFDPNFRRVKEAIEGGEVGETIMVKLCSRDPSPPPFEYVKGGGGIFADMAVHDLDMSRFLMGC----EPVEILAFGSCHIDKRIMELEGS---EAYDTAACLIKYENGKTAIIDVCRQAPYGYDQRAEVLGTTGMIQTDNMYPNTARIYTKDFTGNADMPFDFFMSRYKEAYVQETLSFCDSLVNDAPVGCTGEDGLMALIMSIAADRSASEGRWVKFSEI 290          
BLAST of mRNA_E_fasciculatus_S2_contig7438.15610.1 vs.
Match: Oxidoreductase (domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRS1_NANGC)

HSP 1 Score: 328 bits (842), Expect = 1.050e-107
Identity = 163/289 (56.40%), Postives = 209/289 (72.32%), Query Frame = 2
Query:   11 MEVITDPDVEAVWICSPSQFHADQIKAAAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRRFDPSFSRLQAMIEAGEVGTPVSAVLQSRDPAAPPFDYVKGGGGLFKDMAIHDLDIARWLMGSCGTNEPVRVYATGACNVDKSILELKDSNPSEAIDTANILIEFESGSTATIQVCRKATYGYDQRVEFFGTDGLVKHENHFPSAVQKWTGTSVQQADLPHAFFMTRYADAYKNETRAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEI 877
            M+VI  PDV+AVWICSPSQ+HADQIKA A AGKH+FCEKPIAT LA TIEA+   ++ GVKLMTA QRRFDP+F+R++  I  GEVG  VS  L SRDP+ PPF+YV+GGGG+FKDMA+HDLD++R+LMG+    EP  + A G+C++D+ I  L  +   EA DTA +++++  G TATI VCR+A YGYDQR E  G  G++  +N +P+  + +T  S + ADLP+ FFM+RY DAY  ET+ F K L E G V  +GEDGL AL MA+A +KS  EGR V   EI
Sbjct:  106 MKVIQHPDVDAVWICSPSQYHADQIKACAAAGKHVFCEKPIATGLAETIEAINTCREAGVKLMTALQRRFDPNFARVKRAILEGEVGNVVSVKLTSRDPSPPPFEYVRGGGGIFKDMAVHDLDMSRFLMGT----EPESILALGSCHIDERIGSLPGA---EAFDTAVVIVKYPGGKTATIDVCRQAPYGYDQRAEVLGLKGMIATDNMYPNTARIFTKDSTRNADLPYDFFMSRYKDAYLQETKEFVKCLSEDGPVPCTGEDGLIALVMAIAAEKSALEGRWVDFKEI 387          
BLAST of mRNA_E_fasciculatus_S2_contig7438.15610.1 vs.
Match: Hypothetical (protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAZ2_9STRA)

HSP 1 Score: 325 bits (834), Expect = 1.600e-106
Identity = 163/289 (56.40%), Postives = 207/289 (71.63%), Query Frame = 2
Query:   11 MEVITDPDVEAVWICSPSQFHADQIKAAAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRRFDPSFSRLQAMIEAGEVGTPVSAVLQSRDPAAPPFDYVKGGGGLFKDMAIHDLDIARWLMGSCGTNEPVRVYATGACNVDKSILELKDSNPSEAIDTANILIEFESGSTATIQVCRKATYGYDQRVEFFGTDGLVKHENHFPSAVQKWTGTSVQQADLPHAFFMTRYADAYKNETRAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEI 877
            ++VI +PDV+AVWICSPS FHADQIK  A AGKHIFCEKPIATDLA TIEA+ +    GVKL TA QRRFDP+F R+++ IEAGEVG      L SRDP+ PPF+YVKGGGG+F DMA+HDLD++R+LMG     EPV + ATG+C +DK I+EL+ S   EA DTA  +I++E+G TA I VCR+A YGYDQR E  GT+G+++ +N +P+  + +T      AD+P  FFM+RY +AY  ET +FC  L     V  +GEDGL AL M++A D+S  E R V  SEI
Sbjct:  109 VDVIENPDVDAVWICSPSSFHADQIKRCAAAGKHIFCEKPIATDLAETIEAINLCNKAGVKLFTALQRRFDPNFRRVKSAIEAGEVGEHHMVKLCSRDPSPPPFEYVKGGGGIFADMAVHDLDMSRFLMGC----EPVEILATGSCQIDKKIMELEGS---EAYDTATCVIKYENGKTAIIDVCRQAPYGYDQRAEVLGTEGMIQTDNMYPNTARIFTKDFTGNADMPFDFFMSRYKEAYVQETLSFCDSLVTDAPVQCTGEDGLMALIMSIAADRSAAENRWVKFSEI 390          
BLAST of mRNA_E_fasciculatus_S2_contig7438.15610.1 vs.
Match: Hypothetical (protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J312_9EUKA)

HSP 1 Score: 323 bits (827), Expect = 6.940e-106
Identity = 165/292 (56.51%), Postives = 204/292 (69.86%), Query Frame = 2
Query:    2 AQGMEVITDPDVEAVWICSPSQFHADQIKAAAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRRFDPSFSRLQAMIEAGEVGTPVSAVLQSRDPAAPPFDYVKGGGGLFKDMAIHDLDIARWLMGSCGTNEPVRVYATGACNVDKSILELKDSNPSEAIDTANILIEFESGSTATIQVCRKATYGYDQRVEFFGTDGLVKHENHFPSAVQKWTGTSVQQADLPHAFFMTRYADAYKNETRAFCKILEEGGEVTPSGEDGLAALKMAMACDKSLKEGRPVSLSEI 877
            A  MEVI  PDVEAVWICSPSQ+HADQIKA A AGKH+FCEKPIATDL  TIEA+    + GVKLMTA QRRFDP+F R++  IEAGEVG  V   L SRDP+ PPF+YVKGGGG+FKDMA+HDLD+AR+LM S    EPV + A+G+C +D++I  L  +   EA DTA++L+ F +G  A I VCR+A YGYDQR E  G   ++  +N +P+  + ++ T    AD+P+ FFM+RY +AY  ET AF   L     V  SGEDGL AL MA+A  KS  E R V LSE+
Sbjct:  102 ADAMEVINHPDVEAVWICSPSQYHADQIKACAAAGKHVFCEKPIATDLPETIEAINACNEAGVKLMTALQRRFDPNFRRVKTAIEAGEVGDIVQVKLCSRDPSPPPFEYVKGGGGIFKDMAVHDLDMARFLMDS----EPVSILASGSCTIDEAIKVLPGA---EAFDTASVLMRFANGKEAMIDVCRQAPYGYDQRAEVLGKKAMIMTDNTYPNTARIYSATFTGNADMPYDFFMSRYKEAYVQETLAFVDSLVNDTPVPCSGEDGLVALVMAIAAGKSADERRWVDLSEL 386          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7438.15610.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Oxidoreductase,5.830e-21198.29NAD-binding, myo-inositol 2-dehydrogenase n=2 Tax=... [more]
Oxidoreductase3.460e-17884.72n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z... [more]
Oxidoreductase5.100e-17481.60n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z... [more]
Oxidoreductase1.490e-17382.64n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z... [more]
Uncharacterized2.460e-14169.12protein n=1 Tax=Nannochloropsis salina CCMP1776 Ta... [more]
Hypothetical1.300e-10857.04protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical9.510e-10856.25protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=1... [more]
Oxidoreductase1.050e-10756.40domain protein n=2 Tax=Monodopsidaceae TaxID=42507... [more]
Hypothetical1.600e-10656.40protein n=2 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Hypothetical6.940e-10656.51protein n=1 Tax=Calcidiscus leptoporus TaxID=12754... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7438contigE_fasciculatus_S2_contig7438:249..4370 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Stop1
Start0
Model size885
Hectar predicted targeting categoryother localisation
Exons6
Cds size723
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7438.15610.1prot_E_fasciculatus_S2_contig7438.15610.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7438 249..3343 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842406.4718757-CDS-E_fasciculatus_S2_contig7438:248..4171696842406.4718757-CDS-E_fasciculatus_S2_contig7438:248..417Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7438 249..417 +
1696842406.482372-CDS-E_fasciculatus_S2_contig7438:1316..13911696842406.482372-CDS-E_fasciculatus_S2_contig7438:1316..1391Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7438 1317..1391 +
1696842406.492411-CDS-E_fasciculatus_S2_contig7438:1946..20641696842406.492411-CDS-E_fasciculatus_S2_contig7438:1946..2064Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7438 1947..2064 +
1696842406.5070794-CDS-E_fasciculatus_S2_contig7438:2514..27081696842406.5070794-CDS-E_fasciculatus_S2_contig7438:2514..2708Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7438 2515..2708 +
1696842406.520442-CDS-E_fasciculatus_S2_contig7438:3176..33431696842406.520442-CDS-E_fasciculatus_S2_contig7438:3176..3343Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7438 3177..3343 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842406.5298204-UTR-E_fasciculatus_S2_contig7438:3343..33651696842406.5298204-UTR-E_fasciculatus_S2_contig7438:3343..3365Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7438 3344..3365 +
1696842406.5453002-UTR-E_fasciculatus_S2_contig7438:4232..43701696842406.5453002-UTR-E_fasciculatus_S2_contig7438:4232..4370Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7438 4233..4370 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7438.15610.1

>prot_E_fasciculatus_S2_contig7438.15610.1 ID=prot_E_fasciculatus_S2_contig7438.15610.1|Name=mRNA_E_fasciculatus_S2_contig7438.15610.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=241bp
GTGHGGDHRPRRGGRVDLLPLAVPRRPDQGRGQGREAHLLREAHRHRPRG
HHRGCPGSEGLRREAHDGLPATLRPFLQPTPGYDRSGRGRYAGVRRPAVE
GPRRPSVRLRQGRRRPLQGHGHPRPRHRALAHGLVRHQRAGARVRNRRVQ
RGQEHPGAQGLEPFGGHRHGQHPHRVRKRLHCHNPGVPQGYLRVRPARRV
LRHGRARQARKPLPKRGAEVDGDLGAAGRPAARLLHDALR*
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mRNA from alignment at E_fasciculatus_S2_contig7438:249..4370+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7438.15610.1 ID=mRNA_E_fasciculatus_S2_contig7438.15610.1|Name=mRNA_E_fasciculatus_S2_contig7438.15610.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4122bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7438:249..4370+ (Ectocarpus fasciculatus EfasUO2)
GGCACAGGGCATGGAGGTGATCACAGACCCCGACGTGGAGGCCGTGTGGA TCTGCTCCCCCTCGCAGTTCCACGCCGACCAGATCAAGGCCGCGGCCAAG GCCGGGAAGCACATCTTCTGCGAGAAGCCCATCGCCACCGACCTCGCGGG CACCATCGAGGCTGTCCAGGTGTGTTTTTCTCACAGCCAACATGTCCGTC CATTGGGCGCGCCGAGCGTACGAGCGGCTGGCATGCCGCCACCGCCACCG CCACGGCAATGGGTAGGGGCAGGAGGGGCACATTGTGTTCTCATTCATAT GTCTAGGTTGTGATTTTAGGGGGGGCACGGGGTGTTTGCTTCCGTGTGTC TGGTGTTTGTGAATCTTTTAGTAGGTACCCATTTCGCGGGCACCTGTGGA GGATGTCCAGTTATCTTGGCGTGCTTCGTTCATGTTTTTGTTTTATTTTT CCCTTTAATTTGTTGCTATAATAGTTTGTGACTTTGTCAGTCGATGCTGT ATTTGGCGGACACCCATTGAGGCTGTCCGAGTGTTTTTGTTGGGCGTTTC ATGCTTGCGTTTTTTTCTTCTGTCTGTTGGTGTGGTGTGTGATTTTTTGT CCGTTGCCGTCCCTTCCGGCTTTTCGGGGAGAGTACCCGGATGAGGTTTT GTGGGCGTTTTTTCGAAGGGGACGGCACATGCTGCACTGCTGTGGCCGTT CCCTGAATCCCGGTATGGGAGGTATGTACAGTATGAACAAAGAGCAACAC CTTTGGGTGTCGAAGGTGTGTTTTATCCTTCCACCCGAGCCATGCACTGC TGCGGTGCAACGGTGAGATGAGCCAACCGTAGTCAGTGCGCATCGCTGGT TGGTGATTTTGGACTGAGGTGTTGTTTGTTCTCCGAACCTTTTTGTCTTG AGTTGTTTCGGATGAGCTGGAATACGACACCTCAGCGTTAGTGCCTGCAT GGTGTCGGGCTTGCTAATATCGCCGCCGCTTTCGTGCCCCCCTCCGCCCT TGGTTGGATGAACCCGGTTGCGGATCGGATGGTATGGGATGGGATGTTGA ACTGGTGGACGAACGCAGGTAGCGAAGGACTGCGGCGTGAAGCTCATGAC GGCCTTCCAGCGACGCTTCGACCCTTCCTTCAGCCGACTCCAGGTACTTG TATTAGTATTACCCCTTTCTGTTTTGGTTCGTCTTGGCAGTCGGCGGTGT TGCTCTTGTTGTTGATGCTGCCGTTGCTCTTGTTGCTGCTTGTGTGGTCT GTTGTGCATGAATGTGTTGCGGAAGGATAGTGTTGTGCAACCGGAGCTCG GCCGCTCACATAAGTACCGTTCCGTGCTTCTCATCCGTGCCCGCGCAACA TACACCACCAATACACCTTGTACGTTATGGCGCTCTAAGAAATTCGCTCT TGTTCGTGTGGGTGGCTAGTTTCGGTGTTTGGGCCTTATCAATTGTTCCC TCCGTCCTCCCCCCCGTCCATTCGAAGTACCAGCGTGGTCCCTGCGTGTC GTCGATTCTCCGCTTACCACGACGTGCAAATTTCCTATCCGATTCTCGCA CGTGACAACAACGTCTTTTCGCCAACTCTGCCACGAAGGTTCTACCGTAG AAAGGAGTGGCGAAGAACTTCGTCCACACTGTGTTGCAAAGTAGACAATT TTACACCATATTTCCTTCCCCCCACCCCCCCGCCAATTTGGTGGTTAGGC TATGATCGAAGCGGGAGAGGTCGGTACGCCGGTGTCCGCCGTCCTGCAGT CGAGGGACCCCGCCGCCCCTCCGTTCGACTACGTCAAGGGCGGCGGCGGC CTCTTCAAGGACATGGGTGAGGGCGAGCAACTTGTGGCGTAGTGTTGTTG CAGTCGAGGCGTAATGTTGTGGGCGAGAGCGAGCGAGTTATGGTCGTGGT ATCGTAGTCACGGCGAATTTTTGTGGGTGAGAGCGAGCTAGTGGCGTAGT GTTCGTGGCGTATGTTGTTCTTGTTGTCTTTTGTTGCTCTTTGACTTGGA AGCTCAGGCACGTCGACACTCGACTTTTGTTGCTCTTTGACTTGGAAGCT CAGGCACGTCGACACTCGAATCGATGTCGTATTCGTCTCCCCCCCCCCCC CCCCCCCCCACAAAACCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCC TNNNNNNNNNNCCTCTGGTTTTTCTCCTCTTTCCCCCGAAACGCCCGTCC CGTCTACACTAAATTTCACCTCGTTTTCTTCCCCCCCCCCCCCCTCCCAC CACAAAATCCCGCCAGCCATCCACGACCTCGACATCGCGCGCTGGCTCAT GGGCTCGTGCGGCACCAACGAGCCGGTGCGCGTGTACGCAACCGGCGCGT GCAACGTGGACAAGAGCATCCTGGAGCTCAAGGACTCGAACCCTTCGGAG GCCATCGACACGGCCAACATCCTCATCGAGTTCGAAAGCGGCTCCACTGC CACAATCCAGGTGGGGGGTTCGATGTAAATGAGGGAGGTTGTCCTGGAGC AGCCGTGCCAGCTCTCGTAAGGACAGCAGTGTTGGGGACGCTTGGCCGGG AGACCATGTTAATCAGCAGCGTGGTGCCCCGCAGAATGTAGAAATTGTTT TGTTTTGGCGTGCACCCATGAGTGGCCTTGAAGCGGGGACGACTGCTGTA CTGTTCACCGTGCTGCTTGTACCGGCATTTCTAAGGGCTGTTTTGGCAAA GACGGCCTTGTGGACGGGCCAGTGCCGGGGGAGGTGGTCCACTGGTAGGA GCGGCGTGTTCTGACTGCACCGCTCCTTCTGTGCTGTTGATGCGCACGCC GGCAGGACCGATTGGTGAACTTCGTCTCCTTGTTCTTTTCGCCGGTAACT CTTTGCTCTCTTGTCTCCGTTTCTCCTTGTCCCCCTCTGCGTGTGTGTGA TCGCCAACCAACTTCTTCGTTCCTGCAGGTGTGCCGCAAGGCTACCTACG GGTACGACCAGCGCGTAGAGTTCTTCGGCACGGACGGGCTCGTCAAGCAC GAAAACCACTTCCCAAGCGCGGTGCAGAAGTGGACGGGGACCTCGGTGCA GCAGGCCGACCTGCCGCACGCCTTCTTCATGACGCGTTACGCTGACGCGT ACAAGAACGAGACCCGGGTAAGACGGCGGTAACACGGCGGCGTCGTAACG CCTACTTGCGTTTTCGTCTCGGTTGCAGGATCAGTCTTGCTTTCCGGGGC TGGGACTGTTCGGGTTGGCCTGGCCCGAAACCCACGGCTAGATTGGCAGA GCTGCCTGCGAACAGCGAGGAAAGTTCGATCGCACACCCCTTCTTGCACG CTACGCCAACGCACTCGAGACTTGTCAAGCGGGACGGGTACTTCCGGGGA ATGCAAGCATCGTGCTGATGTGCTCGTAACCCTTCTCGCTGCCGCGTGGT TGGCGGGTTCTGTTTCCTCGTCTTCTGGAGGATGTCGTAATTTAACAATC AATCTCACGAAATCGAATCACTTGCATGCTTGGCCGACCCTCTAGGACAC CATACGCCCGGTTGGCCGGTGACCGCACATCCTACCGCGGGAAATACGTA TCCTACCAGGGTTGTCCGTACATGCTACATTCTATCCATGTCCGACCCCC TCCCACGATACTAGGAGAGAGTGGTCCGGTTTCATCTCTTGGGTTGACCC GTGGCCTCTTTTTTTGTGCATCTGGACGTGATTATGTTCCCGTCTGTTAC CGTCCCTCTCCCCGCTCGCCTTTGGGTTTCCACTGTCACGTTTTTTAGGC GTTATCTCCCTGACTCGCCCCCTCCCCCCCCCCGCTCCCCCCGGAACAGC CCACCTCGGAACTCCAGTCACCACACTACCTCATATGCCGTCNNNNNNNN NNTTCCCCTTTTTTTTGCCCCCCCCCCCCCCCTCTGTGGTTTTCTTTTCC CTTTTTTTTTTTTTTTGTTTTCTCTCTTCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCTGGGTTTCCATTGATACGTTTTGCAGGCATTCTGCAAGATCT TGGAGGAGGGTGGTGAAGTCACTCCTTCGGGAGAAGACGGCTTGGCCGCC CTCAAGATGGCCATGGCATGCGACAAGTCCCTTAAGGAGGGCCGCCCAGT CAGCCTCTCCGAGATCACTGCT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7438:249..4370+

>mRNA_E_fasciculatus_S2_contig7438.15610.1 ID=mRNA_E_fasciculatus_S2_contig7438.15610.1|Name=mRNA_E_fasciculatus_S2_contig7438.15610.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=723bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7438:249..4370+ (Ectocarpus fasciculatus EfasUO2)
GGCACAGGGCATGGAGGTGATCACAGACCCCGACGTGGAGGCCGTGTGGA
TCTGCTCCCCCTCGCAGTTCCACGCCGACCAGATCAAGGCCGCGGCCAAG
GCCGGGAAGCACATCTTCTGCGAGAAGCCCATCGCCACCGACCTCGCGGG
CACCATCGAGGCTGTCCAGGTAGCGAAGGACTGCGGCGTGAAGCTCATGA
CGGCCTTCCAGCGACGCTTCGACCCTTCCTTCAGCCGACTCCAGGCTATG
ATCGAAGCGGGAGAGGTCGGTACGCCGGTGTCCGCCGTCCTGCAGTCGAG
GGACCCCGCCGCCCCTCCGTTCGACTACGTCAAGGGCGGCGGCGGCCTCT
TCAAGGACATGGCCATCCACGACCTCGACATCGCGCGCTGGCTCATGGGC
TCGTGCGGCACCAACGAGCCGGTGCGCGTGTACGCAACCGGCGCGTGCAA
CGTGGACAAGAGCATCCTGGAGCTCAAGGACTCGAACCCTTCGGAGGCCA
TCGACACGGCCAACATCCTCATCGAGTTCGAAAGCGGCTCCACTGCCACA
ATCCAGGTGTGCCGCAAGGCTACCTACGGGTACGACCAGCGCGTAGAGTT
CTTCGGCACGGACGGGCTCGTCAAGCACGAAAACCACTTCCCAAGCGCGG
TGCAGAAGTGGACGGGGACCTCGGTGCAGCAGGCCGACCTGCCGCACGCC
TTCTTCATGACGCGTTACGCTGA
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