mRNA_E_fasciculatus_S2_contig7425.15598.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7425.15598.1 vs.
Match: Amidohydrolase (2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ24_ECTSI) HSP 1 Score: 450 bits (1158), Expect = 3.600e-158 Identity = 214/247 (86.64%), Postives = 226/247 (91.50%), Query Frame = 3
Query: 102 RVDNSYLVRQLRGRPWLRGVIGVTNADGTLDYDAVSPPLLESMHKVGVRGVRLNLLKKSGEDMTRLNAAMDAETGEDGFVSLWAFNREHGWHIEAQQESDGWVDLIETLISRPFLSSGTGCRIVVDHFSRPDPALNLDDPGWKAVLRAARDNDNVYMKVTGTYRLGVCPETLAGMAQVARESFGIERLLWGSDYPHTGCTGPDIRHCEDSQDYAALLGTVRDWYPDEDGQKSVLYSNAARVFSFPSL 842
RVDNSYLVRQLR PWLRGVI VTNADGTLD +AVSPPLLE MH+VGVRGVRLNLLKKS EDMTRLNAAM+ ETG+DGFV+LWAF +EH WHIEAQQESDGWVDLIETL+ GTGCRIVVDHFSRPDPALNL+DPGW+AVLRAARDNDN+YMKVTGTYRLGVCPE LAGMAQ+ARESFGIERLLWGSDYPHTGC GPDIRHCEDSQDYAALL TVRDWYPDE+ QK VLYSNAARVFSFPSL
Sbjct: 36 RVDNSYLVRQLRKHPWLRGVIVVTNADGTLDSEAVSPPLLEDMHRVGVRGVRLNLLKKSEEDMTRLNAAMNVETGDDGFVNLWAFIKEHDWHIEAQQESDGWVDLIETLV-------GTGCRIVVDHFSRPDPALNLEDPGWRAVLRAARDNDNIYMKVTGTYRLGVCPEILAGMAQIARESFGIERLLWGSDYPHTGCAGPDIRHCEDSQDYAALLQTVRDWYPDEEDQKRVLYSNAARVFSFPSL 275
BLAST of mRNA_E_fasciculatus_S2_contig7425.15598.1 vs.
Match: Amidohydro-rel (domain-containing protein n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-12 TaxID=2013703 RepID=A0A2N2VC32_9PROT) HSP 1 Score: 259 bits (663), Expect = 4.130e-82 Identity = 127/243 (52.26%), Postives = 162/243 (66.67%), Query Frame = 3
Query: 108 DNSYLVRQLRGRPWLRGVIGVTNADGTLDYDAVSPPLLESMHKVGVRGVRLNLLKKSGEDMTRLNAAMDAETGEDGFVSLWAFNREHGWHIEAQQESDGWVDLIETLISRPFLSSGTGCRIVVDHFSRPDPALNLDDPGWKAVLRAARDNDNVYMKVTGTYRLGVCPETLAGMAQVARESFGIERLLWGSDYPHTGCTGPDIRHCEDSQDYAALLGTVRDWYPDEDGQKSVLYSNAARVFSFP 836
DNSY+V ++ LRGV+ +TNADG+LD + +L+ H +G+RG+RLNL + E + +NAAMD ETG GF LW F R+H WHIEAQQ + WV LI TL+ T CRIVVDHFSRPD LNL+DPGWKAVL+A ++ V+MKV+G+YRLGV E + A+ ARE FGI RLLWGSDYP+TGC CEDS+DYA L + W+P + Q+++L N A VF FP
Sbjct: 102 DNSYIVDLVKKHDHLRGVLVLTNADGSLDEASFDDHILQRYHDIGIRGIRLNLQGQKPEQLAAINAAMDMETGTPGFRKLWKFMRDHDWHIEAQQGGEQWVGLIATLLK-------TNCRIVVDHFSRPDKKLNLNDPGWKAVLKAG-ESGRVWMKVSGSYRLGVSEEIMTEYARQAREHFGINRLLWGSDYPYTGCKNMPTA-CEDSEDYALLFKRLETWFPSKTEQRAILQDNPAEVFGFP 335
BLAST of mRNA_E_fasciculatus_S2_contig7425.15598.1 vs.
Match: Amidohydro-rel (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L419_9PHAE) HSP 1 Score: 197 bits (500), Expect = 2.270e-60 Identity = 99/133 (74.44%), Postives = 107/133 (80.45%), Query Frame = 3
Query: 444 LSSGTGCRIVVDHFSRPDPALNLDDPGWKAVLRAARDNDNVYMKVTGTYRLGVCPETLAGMAQVARESFGIERLLWGSDYPHTGCTGPDIRHCEDSQDYAALLGTVRDWYPDEDGQKSVLYSNAARVFSFPSL 842
L SGTGCR+VVDHFSRPDPALNL+DPGW+AVLRAARDNDN+ MK+TGTYRLGVCPE LAGMAQ+ARESFGIERLL GS QD+AALL TVRD YPDE+ QK VLYSNAARVFSFPSL
Sbjct: 15 LFSGTGCRMVVDHFSRPDPALNLEDPGWRAVLRAARDNDNIDMKITGTYRLGVCPEILAGMAQIARESFGIERLLRGS------------------QDFAALLQTVRDGYPDEEDQKRVLYSNAARVFSFPSL 129
BLAST of mRNA_E_fasciculatus_S2_contig7425.15598.1 vs.
Match: Amidohydro-rel (domain-containing protein n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A1E3ZM14_9BORD) HSP 1 Score: 119 bits (299), Expect = 1.550e-28 Identity = 87/245 (35.51%), Postives = 123/245 (50.20%), Query Frame = 3
Query: 108 DNSYLVRQLRGRP-WLRGVIGVTNADGTLDYDAVSPPLLESMHKVGVRGVRLNLLKKSGEDMTRLNAAMDAETGEDGFVSLWAFNREHGWHIEAQQESDGWVDLIETLISRPFLSSGTGCRIVVDHFSRPDPALNLDDPGWKAVLRAARDNDNVYMKVTGTYRLGVCPETLAGM--AQVARESFGIERLLWGSDYPHTGCTGPDIRHCEDSQDYAALLGTVRDWYPDEDGQKSVLYSNAARVFSF 833
DNSYL+ +R P LRGV V + VSP LE + G+ G+RLNL+ G+ + L+ + G+ L A R WH+E E+ D++ L CR++VDHF RPDPAL DPG++ +L AARD D V++K++G YR P A A++ E G +RL+WGSD+PHT G YA + DW D D + +L +N +R F+F
Sbjct: 67 DNSYLLDAIRRAPNRLRGVAVVD--------EHVSPADLERLAHGGIAGIRLNLI---GQPLPMLD--------QGGWPRLLACLRALDWHVEVHVEAARLSDIVGPL-------RAAQCRVMVDHFGRPDPALGETDPGFQWLLEAARD-DGVWVKLSGAYRNWSEPIGPAARQAARLLVEHAGPDRLVWGSDWPHTQHPGVT---------YAQTYQALADWIGDIDLRLRILAANPSRCFTF 275
BLAST of mRNA_E_fasciculatus_S2_contig7425.15598.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5G1_9PHAE) HSP 1 Score: 114 bits (285), Expect = 6.560e-28 Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 3
Query: 105 VDNSYLVRQLRGRPWLRGVIGVTNADGTLDYDAVSPPLLESMHKVGVRGVRLNLLKKSGE-DMTRLNAA 308
VDN+YLVRQLR PWL+GVIGVTNADGTLD DAVSPPLLE MH+VGVRGVRLNL KKS E D+TRLNAA
Sbjct: 75 VDNNYLVRQLREHPWLQGVIGVTNADGTLDSDAVSPPLLEDMHRVGVRGVRLNLTKKSEEEDITRLNAA 143
BLAST of mRNA_E_fasciculatus_S2_contig7425.15598.1 vs.
Match: Amidohydro-rel (domain-containing protein n=4 Tax=Pigmentiphaga TaxID=152267 RepID=A0A3G8GK84_9BURK) HSP 1 Score: 117 bits (294), Expect = 7.440e-28 Identity = 84/245 (34.29%), Postives = 122/245 (49.80%), Query Frame = 3
Query: 108 DNSYLVRQLRGRP-WLRGVIGVTNADGTLDYDAVSPPLLESMHKVGVRGVRLNLLKKSGEDMTRLNAAMDAETGEDGFVSLWAFNREHGWHIEAQQESDGWVDLIETLISRPFLSSGTGCRIVVDHFSRPDPALNLDDPGWKAVLRAARDNDNVYMKVTGTYRLGVCPETLAGM--AQVARESFGIERLLWGSDYPHTGCTGPDIRHCEDSQDYAALLGTVRDWYPDEDGQKSVLYSNAARVFSF 833
DN Y++ +R P LRGV V + +P LE + + G+ G+RLNL+ G+ + RL+ + G+ L A R WH+E E+ ++ L CR+VVDHF RP PAL DPG++ +L AARD D V++K++G YR G P A A++ E G +RL+WGSD+PHT G YA + DW D D + +L +N +R F+F
Sbjct: 62 DNGYMLDAIRQAPNRLRGVAVVD--------EHAAPAELERLARGGIVGIRLNLI---GQPLPRLD--------QGGWPRLLACLRALDWHVEVHVEAARLSAIVGPL-------RAAQCRVVVDHFGRPAPALGAADPGFRWLLEAARD-DGVWVKLSGAYRNGSEPAGPAARQAARLLVEHAGPDRLVWGSDWPHTQHPGVT---------YAQTFQALADWIGDIDLRLRILAANPSRCFAF 270
BLAST of mRNA_E_fasciculatus_S2_contig7425.15598.1 vs.
Match: Putative (TIM-barrel fold metal-dependent hydrolase n=2 Tax=Herbaspirillum sp. SJZ107 TaxID=2572881 RepID=A0A542MDC2_9BURK) HSP 1 Score: 118 bits (295), Expect = 9.080e-28 Identity = 82/246 (33.33%), Postives = 122/246 (49.59%), Query Frame = 3
Query: 108 DNSYLVRQLRGRPW-LRGVIGVTNADGTLDYDAVSPPLLESMHKVGVRGVRLNLLKKSGEDMTRLNAAMDAETGEDGFVSLWAFNREHGWHIEAQQESDGWVDLIETLISRPFLSSGTGCRIVVDHFSRPDPALNLDDPGWKAVLRAARDNDNVYMKVTGTYRLGVC---PETLAGMAQVARESFGIERLLWGSDYPHTGCTGPDIRHCEDSQDYAALLGTVRDWYPDEDGQKSVLYSNAARVFSF 833
DNSYL+ L+ P LRG I V D T P L +M G+ G+RLNL+ NAA+ + + + +L + GW +E +E+ +++ L+ G ++VVDHF RPDPAL +DDPG++ +L AA V++K++G YR G + + R +FG+ERLLWGSD+PHT E+ DY + + W PD D ++ VL +F F
Sbjct: 83 DNSYLLAGLKLLPGRLRG-IAVVGPDAT-------PAALGAMQAAGIAGIRLNLVG---------NAAVP-DFADGRWRALLRQVADLGWQVEVHREAGRLPAVLQPLLD-------AGVKVVVDHFGRPDPALGVDDPGFRFLLDAASTR-RVWIKLSGAYRNGAGGRGQQIALDAIPLLRHAFGMERLLWGSDWPHT--------QFENQADYGSARQALDTWLPDPDERRIVLADTPKALFGF 294
BLAST of mRNA_E_fasciculatus_S2_contig7425.15598.1 vs.
Match: Putative (TIM-barrel fold metal-dependent hydrolase n=1 Tax=Cupriavidus gilardii J11 TaxID=936133 RepID=A0A562BPD0_9BURK) HSP 1 Score: 116 bits (291), Expect = 2.470e-27 Identity = 80/246 (32.52%), Postives = 121/246 (49.19%), Query Frame = 3
Query: 108 DNSYLVRQLRGRPW-LRGVIGVTNADGTLDYDAVSPPLLESMHKVGVRGVRLNLLKKSGEDMTRLNAAMDAETGEDGFVSLWAFNREHGWHIEAQQESDGWVDLIETLISRPFLSSGTGCRIVVDHFSRPDPALNLDDPGWKAVLRAARDNDNVYMKVTGTYR---LGVCPETLAGMAQVARESFGIERLLWGSDYPHTGCTGPDIRHCEDSQDYAALLGTVRDWYPDEDGQKSVLYSNAARVFSF 833
DN YL+ LR P LRGV+ V +V LE+M + GV G+RLNL+ + + + + +L + GWH+E + +++ TL+ TGCR+VVDHF RPD AL + DPG++ +LR A D V++K++G YR C + A+ +FG +RL+WGSD+PHT +H S Y + DW D D ++++L R+F F
Sbjct: 65 DNGYLLDALRQAPQRLRGVVVVD--------PSVPAGQLEAMTRAGVVGMRLNLIGLAAPKLD-----------DPAWQALLSTIDALGWHVEVHLPAGRLQEVVPTLLD-------TGCRVVVDHFGRPDAALGVRDPGFQFLLRQA-DTGRVWVKLSGAYRNWDAAQCADAPREAARQLLSAFGAQRLMWGSDWPHT-------QHGHVS--YRPTREWLDDWIDDSDQRRTLLADTPLRLFQF 274
BLAST of mRNA_E_fasciculatus_S2_contig7425.15598.1 vs.
Match: amidohydrolase (family protein n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=UPI000D65D623) HSP 1 Score: 116 bits (291), Expect = 3.740e-27 Identity = 82/242 (33.88%), Postives = 113/242 (46.69%), Query Frame = 3
Query: 108 DNSYLVRQLRGRPWLRGVIGVTNADGTLDYDAVSPPLLESMHKVGVRGVRLNLLKKSGEDMTRLNAAMDAETGEDGFVSLWAFNREHGWHIEAQQESDGWVDLIETLISRPFLSSGTGCRIVVDHFSRPDPALNLDDPGWKAVLRAARDNDNVYMKVTGTYRLGVCPETLAGMAQVARESFGIERLLWGSDYPHTGCTGPDIRHCEDSQDYAALLGTVRDWYPDEDGQKSVLYSNAARVFSF 833
DNSYL+ LR W R + G+ D P L ++ GV GVRLNL+ + +T D + + GW +E Q E+ L L L +G G +V+DHF RPDPAL +DDPG++ VL R V++K++G YR G A + Q+ R FG+ERLLWGSD+PHT G +A + DW PD + +VL +F F
Sbjct: 65 DNSYLLAALR--RWPRRLRGIAVLD-----PGAPPARLRGLNDAGVVGVRLNLIGRPDPALTL-----------DPWPLFLTRIADLGWQVEVQAEARRLPGLAAGL-----LRAGVG--VVLDHFGRPDPALGVDDPGFRGVLDLGRSG-RVWVKLSGAYRCGGAGTARAALPQLKRY-FGVERLLWGSDWPHTQFEGETC--------HAEARARLDDWLPDAAERAAVLVDTPRALFRF 271
BLAST of mRNA_E_fasciculatus_S2_contig7425.15598.1 vs.
Match: amidohydrolase (family protein n=3 Tax=Cupriavidus gilardii TaxID=82541 RepID=UPI00157471BF) HSP 1 Score: 115 bits (289), Expect = 1.130e-26 Identity = 87/253 (34.39%), Postives = 119/253 (47.04%), Query Frame = 3
Query: 108 DNSYLVRQLRGRPW-LRGVIGVTNADGTLDYDAVSPPLLESMHKVGVRGVRLNLLKKSGEDMTRLNAAMDAETGEDGFVSLWAFNREHGWHIEAQQESDGWVDLIETLISRPFLSSGTGCRIVVDHFSRPDPALNLDDPGWKAVLRAARDNDNVYMKVTGTYRL---GVCPETLAGMAQVARESFGIERLLWGSDYPHTGCTGPDIRHCEDSQDYAALLGTVRDWYPDEDGQKSVLYSNAARVFSFPSLAGDL 854
DN YL+ LR +P LRGV V A G + DA M GV G+RLNL+ + G + L GWH+E + +++ TL++ GCRIVVDHF RPDPAL++ DPG+ +LR A D+ V++K++G YR C + AQ E+F RLLWGSD+PHT P + Y A + DW D ++ +L A +F F GDL
Sbjct: 106 DNCYLLAALRAQPARLRGVAVVDPAIGETELDA--------MAAAGVVGIRLNLIGLPAPAL-----------GSAPWRGLLERINARGWHVELHLPAARLQEVMPTLLA-------AGCRIVVDHFGRPDPALDVADPGFLDLLRKA-DSGRVWVKLSGAYRNWPDARCAQAGRRAAQRLLEAFTASRLLWGSDWPHT--QHPHVA-------YGATRQWLDDWIDDAAQRRQLLGDTALTLFQF-EFQGDL 321 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7425.15598.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7425.15598.1 >prot_E_fasciculatus_S2_contig7425.15598.1 ID=prot_E_fasciculatus_S2_contig7425.15598.1|Name=mRNA_E_fasciculatus_S2_contig7425.15598.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=213bp MHKVGVRGVRLNLLKKSGEDMTRLNAAMDAETGEDGFVSLWAFNREHGWHback to top mRNA from alignment at E_fasciculatus_S2_contig7425:2084..3308- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7425.15598.1 ID=mRNA_E_fasciculatus_S2_contig7425.15598.1|Name=mRNA_E_fasciculatus_S2_contig7425.15598.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1225bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7425:2084..3308- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7425:2084..3308- >mRNA_E_fasciculatus_S2_contig7425.15598.1 ID=mRNA_E_fasciculatus_S2_contig7425.15598.1|Name=mRNA_E_fasciculatus_S2_contig7425.15598.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=639bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7425:2084..3308- (Ectocarpus fasciculatus EfasUO2)back to top |