mRNA_E_fasciculatus_S2_contig7394.15572.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7394.15572.1 vs.
Match: Peptidase (S59 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9B1_9PHAE) HSP 1 Score: 1647 bits (4266), Expect = 0.000e+0 Identity = 928/1075 (86.33%), Postives = 958/1075 (89.12%), Query Frame = 1
Query: 1 GAKLVSYDVDIGEWVFDTFHWSRYAMSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGRAGRVPRPARGATSSKGQKRAASEGRRSTKLAMPDTDDEGSVADNASDAGGGAREAASTRRRTSVEGEDGKMGNSDAAGFDSMDTDTPDVVVDGGDGTAWPDSGRVTSNLFPERDPSQTEHMRSSLFGQEERRTPRKATDVGASGXXXXXXXXSRPLSWARLRPEPVARPPALRNPEDARAAAAFRPAAGGLESKVLQSLANAWKPAAEEVKSDAGRRGAVRAGQAVADLGLRMGRGFRASWGPDGKLFCPRALGGGGRKGFHGVSVSRFDPTPSASDRDVYRLYVEPLRNHLGSAVPFAPPKAERHGAVAAAAASPPRWALPRRRNDRPENYETLVHCIHGYVELHRSAGAAATASSREAGAATEDSPEWVLEQSWRLASAMWGQEEGEGRAQDLPMPGDLQRAADFALAGDCDGGSPAARREAAVGDWLARAVSSCVPSPRGGPSAAAAGGRG-----DADRETWRRVLELLSVRRVHDAAAAAMAAGLPRLAVMLTAVATQGGGVGRPPARYGSRFLAQQAGQWQAAGADARMPQEAFSVVQLLGREGFRDVGLRGLICKGASGSLRPSLDWMRQLGLCLWFGAGASAGIGGEDGDRDGGSGGGV-ADAIEAYDALVADGEALSPTARYFLEPTHHESAHLDKVCAELRRVYMPP----TGLSLEKSGGEDRGSGRDRCVLRCLLAMYPSRKAGGGXXXXXXXSGVSLLSALEPMAVTPDVMDYRHSWHLMNVVEALGVAEVQDRAKAAAVTEGLRFQLVSVGLWEWAVYVALTAEGDPDRRAATARELVLRHGYRVLGAPVNSPDAERGRFLEDLGIPRAWLHEAAAVRAGYEXXXXXXXXXXXXXXXXXXXXXSSAHDTKLNLLASAGSAELAREAAKEACVLAPSSMFLGGEALSLLAEKLGEIAWLVEE------VGSLGREERKSGGGGGAGVGKEFYAYKEIVEAAVEERG---AAALRWSRDEVDRLERMWRIVQPSASRVVGAAAAHQTMESFWKNVAPVAAVV 3168
GAKLVSYDVDIGEWVF+TFHWSRYAMSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGRAGRVPRPARG TSSKGQKRAASEGRRSTKLAMPDTDDEGSVADNASDAGGGAREA++TR RT VEGE KM SDAAGFDSMDTDTP+VVVDG DGTAWPDS RVTS LFPERDPSQ EHMRSSLFGQEERR PRKA DVGAS XXXXXXXX RPLSWARL+PEPVARPPALRNPEDA+AAAAFRPAAGGLES+VL+ LANAW+PAA EV SDA RGAVRAGQAVADLGLRMGRGFRASWGPDGKLFCPRA+GGG R GFHGV VSRFDPTPSASDRDV+RLYVEPLRNHLGSA P A +A+RHGA AAAA PPRWALPRRRNDRP+NY+TLV CIHGYVE+HR AGAAAT+SSREAGAATEDSPEWVLEQSWRLASAMWGQEEGEGR QDLP+PGDLQRAAD LAGDCDGGSPAARREAAVGDWLARAVSSCVPSP GGPS DADRETWRRVLELLSVRRVHDAA AAMAAGLPRLAVMLTAVATQGGG GRPPARYGS+FLAQQA QWQAAGADARMPQEAFSVVQLLGREGFRDVGLRGLI KG GSLRPSLDWMRQLGLCLWFGAGASAGIGGEDGDRDGGSGGGV A+AIEAYD LVADGEAL PTARYFLEPTHHESAHLDKVC ELRRVYMPP GLSLEKSGGEDRG GRDRCVLRCLLAMYPSRKAGGG SGVSLLSALEPMAVTPDVMDYRHSWHLMNVVEALGVAEVQDRAKAAAVTEGLRFQLVSVGLWEWAVYVALTAEG PDRRAATARELVLRHGYRVLGAPVNSPDAERGRFLE+LGIP AWLHEAAAVRAGYE SAHDTKL LL SAGSAELA EAAKEAC++APSSMFLGGE LSLLAEKLGEIAWLVEE +GSLG E RK+GG AGVGKEFYAYKEIVEAAVEER AAALR SRDE+DRLERMWRIVQPSASRV+GAAAAHQTME+FW+N+APVAA V
Sbjct: 1144 GAKLVSYDVDIGEWVFETFHWSRYAMSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGRAGRVPRPARGTTSSKGQKRAASEGRRSTKLAMPDTDDEGSVADNASDAGGGAREASNTRSRTGVEGES-KMAGSDAAGFDSMDTDTPEVVVDGDDGTAWPDSQRVTSTLFPERDPSQMEHMRSSLFGQEERRMPRKAADVGASXXXXXXXXX-RPLSWARLQPEPVARPPALRNPEDAKAAAAFRPAAGGLESRVLRLLANAWEPAAGEVVSDAAARGAVRAGQAVADLGLRMGRGFRASWGPDGKLFCPRAMGGGARNGFHGVRVSRFDPTPSASDRDVHRLYVEPLRNHLGSAGPLAEAQAKRHGA--AAAAVPPRWALPRRRNDRPQNYDTLVRCIHGYVEVHRLAGAAATSSSREAGAATEDSPEWVLEQSWRLASAMWGQEEGEGRVQDLPLPGDLQRAADLTLAGDCDGGSPAARREAAVGDWLARAVSSCVPSPSGGPSXXXXXXXXXXXXXDADRETWRRVLELLSVRRVHDAAVAAMAAGLPRLAVMLTAVATQGGGGGRPPARYGSKFLAQQAAQWQAAGADARMPQEAFSVVQLLGREGFRDVGLRGLISKGPGGSLRPSLDWMRQLGLCLWFGAGASAGIGGEDGDRDGGSGGGVVANAIEAYDTLVADGEALLPTARYFLEPTHHESAHLDKVCTELRRVYMPPPRPPAGLSLEKSGGEDRGYGRDRCVLRCLLAMYPSRKAGGGVGGA---SGVSLLSALEPMAVTPDVMDYRHSWHLMNVVEALGVAEVQDRAKAAAVTEGLRFQLVSVGLWEWAVYVALTAEGGPDRRAATARELVLRHGYRVLGAPVNSPDAERGRFLENLGIPGAWLHEAAAVRAGYEHKSAVPSPTYPRESGSAVPAVGSAHDTKLKLLTSAGSAELALEAAKEACMVAPSSMFLGGETLSLLAEKLGEIAWLVEEGGKQEEIGSLGGEGRKNGG---AGVGKEFYAYKEIVEAAVEERAGGAAAALRRSRDEMDRLERMWRIVQPSASRVLGAAAAHQTMETFWQNLAPVAAAV 2208
BLAST of mRNA_E_fasciculatus_S2_contig7394.15572.1 vs.
Match: Nuclear (protein 96-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2A3_9STRA) HSP 1 Score: 181 bits (458), Expect = 3.770e-42 Identity = 177/608 (29.11%), Postives = 247/608 (40.62%), Query Frame = 1
Query: 859 VADLGLRMGRGFRASWGPDGKLFC------PRALGGGGRKGFHGVSVSRFDPTPSASDRDVYRLYVEPLRNHLGSAVPFAPPKAERHGAVAAAAASPPRWALPRRRNDRPENYETLVHC-IHGYVELHRSAGAAATASSREAGAATEDSPEWVLEQSWRLASAMWGQEEGEGRAQDLPMPGDLQRAADFALAGDCDGGSPAARREAAVGDWLARAVSSCVPSPRGGPSAAAAGGRGDADRETWRRVLELLSVRRVHDAAAAAMAAGLPRLAVMLTAVATQGGGVGRPPARYGSRFLAQQAGQWQAAGADARMPQEAFSVVQLLGREGFR---DVGLRGLICKGASGSLRPSLDWMRQLGLCLWFGAGASAGIGGEDGDRDGGSGGGVADAIEAYDALVADGEALSPTARYFLEPTHHESAHLDKVCAELRRVYMPPTGLSLEKSGGEDRGSGRDRCVLRCLLAMYPSRKAGGGXXXXXXXSGVSLLSAL--EPMAVTPDVMDYRHSWHLMNVVEALGVAEVQDRAKAAAVTEGLRFQLVSVGLWEWAVYVALTAEGDPDRRAATARELVLRHGYRVLGAPVNSPDAERGRFLEDLGIPRAWLHEAAAV 2646
D L +G FRA WG DGKL G + +SV + TPS + D LY L HL A ER AV+A A P W L E+ + LVH I EL ++ G A P+W + Q WRL +A+WG E+ + ++ P DL R+ V WL+ A + C+ AAA G T ++LELLSV ++ AA A GL RL+ +L GVG R + +Q Q + + + ++LL E D G G L+W+R LGLCLW+ G +A A+ Y V G A +P ARY ++PTH L + C L + ++P E G R C+L L+ + G L L +P+ TPDV+DYRH+WHL+ V++A+ V V + L QLV GLW WA YV L + D R++ +LVLRHGY VL ++ E + L +L IP WL+E+ A+
Sbjct: 812 TCDAALLLGCSFRAGWGADGKLVVVTRRRVAAVSDSGSLRTIRSISVRKLTATPSRHE-DAAALYQTALTLHLQHAKCSEAVLPER--AVSAEIAVAPSWGLEN------ESAQQLVHDHISRSAELGQARGVPAQ-------------PDWAVAQGWRLVNALWGSEK---QLEEGQAPADLSFE----------------HRQRFVSAWLSSATADCL---------AAAASDGAEKPSTMAQILELLSVHQIDGAAELAAETGLLRLSTVLAFA-----GVGNAVVR---QEAVEQLAQLLSVDENKYDNTAFTNALRLLSGEELACLSDFAPHAAARDGVQG-----LNWLRHLGLCLWYQYGGVE----------------LAAALARYAQQVVKGGADAPIARYIVDPTHFSQDQLPRKCDLLEKQFLP-----------EGVGGSRGLCLLYRLMRLAV---------------GEDTLQPLYLDPLCCTPDVLDYRHAWHLLTVLQAMQVTVCMP-GTVMLVADALVSQLVGSGLWHWAAYVLLNID-DEQVRSSRVHDLVLRHGYAVLH-DMSDAGLEVKQVLTELRIPVQWLYESTAL 1311
BLAST of mRNA_E_fasciculatus_S2_contig7394.15572.1 vs.
Match: Hypothetical (protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6I5_9STRA) HSP 1 Score: 154 bits (389), Expect = 4.170e-34 Identity = 198/656 (30.18%), Postives = 256/656 (39.02%), Query Frame = 1
Query: 847 AGQAVA-----DLGLRMGRGFRASWGPDGKLFCP---------RALGGGGRKGF-------HGVSVSRFDPTPSASDRDVYRLYVEPLRNHLGSAVPFAPPKAERHGAVAAAAASPPRWALPRR-RNDR---PENYETLVHCIHGYVELHRSAGAAATASSREAGAATEDSPEWVLEQSWRLASAMWGQEEG-------EGRAQDLPMPGDLQRAA-DFALAG-DCDGG--SPAARREAAVGDWLARAV---SSCVPSPRGGPSAAAAGGRGDADRETWRRVLELLSVRRVHDAAAAAMAAGLPRLAVML-----TAVATQG-GGVGRPPARYGSRFLA-QQAGQWQAAGADARMPQEAFSVVQLLGREGFR----DVGL--RGLICKGASGSLRPSLDWMRQLGLCLWFGAGASAGIGGEDGDRDGGSGGGVADAIEAYDALVADGEALSPTARYFLEPTHHESAHLDKVCAELRRVYMPPTGLSLEKSGGEDRGSGRDRCVLRCLLAMYPSRKAGGGXXXXXXXSGVSLLSALEPMAVTPDVMDYRHSWHLMNVVEALGVAEVQDRAKAAAVTEGLRFQLVSVGLWEWAVYVALTAEGDPDRRAATARELVLRHGYRVLGAPVNSPDAERGRFLEDLGIPRAWLHEAAAVRAGY 2658
AGQA A DLGL MGR FRAS+GP G+L P R +G + H V++ R P +D Y L H V + A A PR+ LP R DR P Y LV +H EL E A + EW + Q WRLA A+WGQE+ E A LP G D A DC G P+ RR A + WLA V + P+P G + A + + LS RV DA +A++AG RLA ML ++ T+G GGVG S LA +Q +W A D + + V LL + VG G++ S +LDW R LGL LWF A GE+L + + + A R + P E S R CVL LL +Y G V + AL P A T D +DYRH+W L+ ++EA+ E AA V + QL++VGLW W+VY A DP R+ R VLRHG A ++ FL+DLG+P AWLHEA A G+
Sbjct: 334 AGQASASRMSLDLGLSMGRSFRASFGPQGQLILPFLAPRGSTRRTVGATPSEAAAAMTGLAHAVTIERVAPRAQVAD-----AYTPLLAEHHRFRVRAGEADEAEEEGPSGAEARVPRFHLPTGFRPDRTMDPTAYPKLVDFLHRCAEL------------TEGHALSWHEEEWPVAQMWRLAGALWGQEQRTVVVPRLEAGAAALPGAGAAPLPVYDHARERQDCRNGLHRPSDRRAALLSRWLAHCVRGRAQEAPAPVAGAAPA------------FLEIFGSLSEGRVPDAVVSAISAGEVRLAGMLACHGASSAGTRGPGGVGAGDEETQSAVLAAEQLAKWLAEQHDDFVDKGLQLVYSLLTDDLQHLDPDQVGHLESGVLSPEDCRSTAAALDWQRGLGLRLWF--------------------------------EQAPGESLQFPFQQYTDAFRTCKAAPPLPAYAARHWHEAP----------EFSASPRHLCVLYRLLELYCL-----GEEDCRPVDVV--VQALMPQAATADPLDYRHAWQLLTLLEAVNFYERLPEDTAAMVIDSFASQLIAVGLWTWSVY-AYAHLRDPRLRSHAIRSTVLRHGPDATPAEMD--------FLQDLGVPVAWLHEARAYARGH 902
BLAST of mRNA_E_fasciculatus_S2_contig7394.15572.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FW32_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.410e-20 Identity = 66/175 (37.71%), Postives = 91/175 (52.00%), Query Frame = 1
Query: 2140 GLSLEKSGGEDRGSGRDRCVLRCLLAMYPSRKAGGGXXXXXXXSGVSLLSALEPMAVTPDVMDYRHSWHLMNVVEALGVAEVQDRAKAAA--VTEGLRFQLVSVGLWEWAVYVALTAEGDPDRRAATARELVLRHGYRVLGAPVNSPDAERGRFLEDLGIPRAWLHEAAAVRAGY 2658
G+ L GG R + C+L LL +Y A G A+ P AVTPD +DYRHSW L V +AL ++ R K +A +T+ QL++VGLW+WAVYV + + D RR+A+ R LVLR G+ PD ++ L +L +P WL EA A +GY
Sbjct: 1 GVGLMGHGGGGRSLPKQGCILYHLLQLYCGGDADGNAENATE-------QAMAPGAVTPDKLDYRHSWQLSTVFDAL---DLYPRPKESADRITDAFASQLIAVGLWKWAVYVYMHLD-DNTRRSASIRGLVLRFGW-------TDPDDKQYPTLSELQVPSVWLDEAIAYASGY 157
BLAST of mRNA_E_fasciculatus_S2_contig7394.15572.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MBH2_9STRA) HSP 1 Score: 102 bits (253), Expect = 6.780e-18 Identity = 176/727 (24.21%), Postives = 280/727 (38.51%), Query Frame = 1
Query: 859 VADLGLRMGRGFRASWGPDGKLFCPRALGGGGRKGFHGVSVSRFDPTPSASDRDVYRLYVEPL------RNHLGSAV------------PFAPPKAERHGAVAAAAASPPRWALPRRRN---------DRPENYETLVHCIHGYVELHRSAGAAATASSREAGAATEDSPEWVLEQSWRLASAMWGQE------EGEGRAQDL-PMPGDLQRAADFALAGDCDGGSPAARREAAVGDWLARAVSSCVPSPRGGPSAAAAGGRGDADRETWRRVLELLSVRRVHDAAAAAMAAGLPRLAVMLTAVATQGGGVGRPPARYGSRFLAQQAGQWQAAGADARMPQEAFSVVQLLGREGFRDVGLRGLICKGASGSLRPS---LDWMRQLGLCLWFGAGASAGIGGEDGDRDGGSGGGVADAIEAYDALVADGEALSPTARYFLEPTHHESAHLDKVCAELRRVYMPPTGLSLEKSGGEDRGSGRDRCVLRCLLAMYPSRKAGG---GXXXXXXXSGVSLLSALEPMAVTPDVMDYRHSWHLMNVVEALGVAEVQDRAKAAAVTEGLRFQLVSVGLWEWAVYVALTAEGDPDRRAATARELVLRHGYRVLGAPVNSPDAERG--------RFLED-LGIPRAWLHEAAAVRAGYEXXXXXXXXXXXXXXXXXXXXXSSAHDTKLNLLASAGSAELAREAAKEACVLAPSSMFLGGEALSLLAEKLGEIAWLV 2892
+ + L MGR FR W DGK+ G+ F G +V+ P + V+R+ VE + RNH A P H AV A + A R + P + +H ++ + +S+ AA +A A P+W + ++ L A +GQE + RA +L P+ D Q+ A RR + W+ S+ V + A G+ +T+ R+ ELLS RR++DA + A AG+ RLA +L+ Q G P + Q W+ + AD + E + +LL +I + A G+ S L W+R +G+ W+ + + I E+ ++ ++E Y ++ D +P + Y + A+ V P T L L ++PS A G ++++A++P T D +D+R S+ L+ ++E+ G++ + + A A + + FQL+S GLW+WA++VAL D R ++VLR G A +G FL L +P A LHEA+A RAGY S H+ ++ L SAG LA E LAP++M G A L L I L
Sbjct: 884 ITNYALSMGRSFRVGWSKDGKIVHA------GKFTFSGANVAEAVPAVGS----VHRVVVEKVDTMRWARNHKPDADFRSAAPETILEDPLVAMLTASHQAVQAKNLTETEAAAQRTVSASLGKLPLWQLPAADPSQLHEYIPFLTMLKSSIAA-----YQAHAPHHRHPDWTVGKALELIDATYGQEKTTFSADAATRAMELIPLYEDRQQYAPEIWE----------RRRTMLSCWIESVTSTQVKQ-----TDEADNGQFGQSAKTYNRMFELLSCRRLNDAVSLAEKAGMFRLATLLS----QLDGDATIPT-----LIRNQLAMWKVSEADLTIAPELVKLYRLLAGT---------VITEDADGTTESSMLGLGWLRGIGVLFWYCSSTDSFI--ENVST-------LSSSLENYRIVLQDSVVDAPVSPYLQDKD-----------AQGADVSYPNTVHGL----------------YALLELLFPSAAATNMDLGEAELEMDIRNNVIAAVKPNGYTRDALDHRASFLLLVMLESAGISHI-NAAHACIIRQHYIFQLLSAGLWQWALFVALQIP-DLSARYCIVSDIVLRFGGECDWE--EEKRASKGGHAYPSLYAFLTTALNVPEALLHEASAYRAGY----------------------SHQHNQQVRSLISAGRYRLATEVT--VTHLAPTAMLASGAAAEQLLHLLESITDLA 1498
BLAST of mRNA_E_fasciculatus_S2_contig7394.15572.1 vs.
Match: LOW (QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96-like n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A3DFD2) HSP 1 Score: 96.3 bits (238), Expect = 3.560e-16 Identity = 97/361 (26.87%), Postives = 144/361 (39.89%), Query Frame = 1
Query: 1573 VLELLSVRRVHDAAAAAMAAGLPRLAVMLTAVATQGGGVGRPPARYGSRFLAQQAGQWQAAGADARMPQEAFSVVQLLGREGFRDVGLRGLICKGASGSLRPSLDWMRQLGLCLWFGAGASAGIGGEDGDRDGGSGGGVADAIEAYDALVADGEALSPTARYFLEPTHHESAHLDKVCAELRRVYMPPTGLSLEKSGGEDRGSGRDRCVLRCLLAMYPSRKAGGGXXXXXXXSGVSLLSALEPMAVTPDVMDYRHSWHLMNVVEALGVAEVQDRAKAAAVTEGLRFQLVSVGLWEWAVYVALTAEGDPDRRAATARELVLRHGYRVLGAPVNSPDAERGRFLED-LGIPRAWLHEAAAVRA 2652
V L+ +R+ +A A +G RLA++L A GG R L Q W AD + +E + LL + + G I ++ LDW R L + LW+ + I ADA+ Y E + ARY L P Y+ T L ++ + +G + + LL +Y R L L P VTPD +DYR SWHL V++A+ + ++ +A T QL +VGLWEWA++V L D +R +E + RH E+ FL++ LGIP AW+H A ++RA
Sbjct: 831 VFSYLTGKRISEACKLAQQSGDHRLALLLAQAA--GGQQVR-------ELLNLQLADWSQMKADPFIQEERLKIFALLAGKAVW-ISSEGYI------NICSQLDWKRCLAVHLWYMLPPRSSI---------------ADALNMYSEAFQGSEDVQRYARYPLPP------------------YLEDTKADLIEASENEEEAGPHQDICYHLLKLYSDRY-------------YELHPLLNPRTVTPDHLDYRLSWHLWMVLQAMNYTHLSEKHQAMVHTS-FAAQLEAVGLWEWAIFVLLHIP-DSQQRGNAVQEQLNRH----CTLDETEEQKEKELFLQEKLGIPSAWIHNAKSLRA 1123
BLAST of mRNA_E_fasciculatus_S2_contig7394.15572.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKT2_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 4.850e-16 Identity = 145/552 (26.27%), Postives = 197/552 (35.69%), Query Frame = 1
Query: 1132 PRWALPRR----RNDRPE------NYETLVHCIHGYVELHRSAGAAATASSREAGAATEDSPEWVLEQSWRLASAMWGQEEGEGRAQDLPMPGDLQRAADFALAGDCDGGSPAA---------------RREAAVGDWLARAVSSCVPSPRGGPSAAAAGGRGDADRETWRRVLELLSVRRVHDAAAAAMAAGLPRLAVMLTAVATQGGGVGRPPARYGSRFLAQQAGQWQAAGADARMPQEAFSVVQLLGREGFRDVGLRGLICKGASGSL-------------RPSLDWMRQLGLCLWFGAGASAGIGGEDGDRDGGSGGGVADAIEAYDALVADGEALSPTARYFLEPTHHESAHLDKVCAELRRVYMPPTGLSLEKSGGEDRGSGRDRCVLRCLLAMYPSRKAGGGXXXXXXXSGVSLLS-ALEPMAVTPDVMDYRHSWHLMNVVEALGV-AEVQDRAKAAAVTEGLRF---QLVSVGLWEWAVYVALTAEGDPDRRAATARELVLRHGYRVLGAPVNSPDAERGRFLEDLGIPRAWLHEAAAVRAGY 2658
P+W LPR +DR Y LV +H +L ++ A AS+ +W + WRL A++GQE+ + QR A A G+ A RR+A + +WL C RG D D+ + LL+ R+ +A A P + L ++ Q GV + +AQQ W + P AF F D LR I SG L LDW R+LGL WF S A + Y A P A+L G E++ G S C L LL +Y GG ++ AL P AVTP +DYRH++ L+ V++AL + + + AK V L QLVSVGLW WAVYV++ RR+A R LVLRH + A + A + L +P WLHEA A AGY
Sbjct: 23 PQWRLPRAFVSVGSDRSSLEVEETEYGMLVELMHHCADLTAASAAKDWASNPS---------DWTVAHMWRLLLALFGQEDRPSSSSSSS-----QRPAMLASGQQRARGTTAIKVYAKATKETHCIFDRRQAMISEWLR-----CSVKGRGANRPVF-----DGDKR-GSLLFSLLAEGRIPEAVKEASG---PLSSPRLASIVAQSTGVSARSS------IAQQIQHWARPDNPTKFP--AFD---------FMDEPLR-FIYPMLSGDLAVLDHAYALDKDTHRLLDWQRRLGLHGWFQQNES-----------------FAQQMHKYQTAYRKDCAAPPL-----------PAYLQXXXXXXXXXXXXRDG---ERADGPPSSSSSQFCALYHLLELY----CGGEDNHQGGNCSADIIKRALTPAAVTPARLDYRHAFSLVTVLQALHLYVSLNEEAKGGVVNTVLHSAAGQLVSVGLWPWAVYVSMMLPDAVHRRSAV-RGLVLRHCHAADPASLTGERA----LMRRLRVPECWLHEAQAYAAGY 488
BLAST of mRNA_E_fasciculatus_S2_contig7394.15572.1 vs.
Match: Nuclear (pore complex protein Nup98-Nup96 (Fragment) n=1 Tax=Xenopus laevis TaxID=8355 RepID=B3DLM1_XENLA) HSP 1 Score: 95.5 bits (236), Expect = 5.830e-16 Identity = 100/363 (27.55%), Postives = 151/363 (41.60%), Query Frame = 1
Query: 1573 VLELLSVRRVHDAAAAAMAAGLPRLAVMLTAVATQGGGVGRPPARYGSRFLAQQAGQWQAAGADARMPQEAFSVVQLL-GREGFRDVGLRGL-ICKGASGSLRPSLDWMRQLGLCLWFGAGASAGIGGEDGDRDGGSGGGVADAIEAYDALVADGEALSPTARYFLEPTHHESAHLDKVCAELRRVYMPPTGLSL-EKSGGEDRGSGRDRCVLRCLLAMYPSRKAGGGXXXXXXXSGVSLLSALEPMAVTPDVMDYRHSWHLMNVVEALGVAEVQDRAKAAAVTEGLRFQLVSVGLWEWAVYVALTAEGDPDRRAATARELVLRHGYRVLGAPVNSPDAERGRFLEDLGIPRAWLHEAAAVRA 2652
V L+ R+ DA A +G RL+++L+ + VG R ++ Q W D + +E V LL G +R + + +C LDW R L + LW+ +A I A A+ Y+ + E P A Y L P Y+ G+SL ++ + RD CV LL +Y R+ L L+P +VTPD +DYR SWHL V++AL + + + + QL +VGLWEWA++V L P R A REL++RH V +P + A+ + L +P W+HEA A+R+
Sbjct: 799 VFSFLTGGRISDACRLAQKSGDHRLSLLLSQM------VGSQEMR---ELISLQLVDWNKLQVDHYIQEERLRVFCLLSGTPVWRSSDNKSINVCS--------QLDWKRTLAVHLWYMLPPTATI---------------AQALRLYERAFQEHEEGEPYACYPLPP------------------YLEDCGISLGDEPSAKFSSLQRDVCVH--LLKLYSERQ-------------YDLCQLLDPSSVTPDPLDYRLSWHLWMVLQALNYTHLSEH-RQGTLHASYAAQLENVGLWEWAIFVLLHIP-HPHVREAGVRELLIRHCV-VRESPESL--AKENFLIHRLCVPAQWVHEAKAIRS 1091
BLAST of mRNA_E_fasciculatus_S2_contig7394.15572.1 vs.
Match: Nuclear (pore complex protein Nup98-Nup96 n=13 Tax=Xenopus TaxID=8353 RepID=J7I6Y1_XENTR) HSP 1 Score: 93.6 bits (231), Expect = 2.650e-15 Identity = 102/367 (27.79%), Postives = 150/367 (40.87%), Query Frame = 1
Query: 1573 VLELLSVRRVHDAAAAAMAAGLPRLAVMLTAVATQGGGVGRPPARYGSRFLAQQAGQWQAAGADARMPQEAFSVVQLL-GREGFRDVGLRGL-ICKGASGSLRPSLDWMRQLGLCLWFGAGASAGIGGEDGDRDGGSGGGVADAIEAYDALVADGEALSPTARYFLEPTHHESAHLDKVCAELRRVYMPPTGLSLEKSGGEDRGSG-----RDRCVLRCLLAMYPSRKAGGGXXXXXXXSGVSLLSALEPMAVTPDVMDYRHSWHLMNVVEALGVAEVQDRAKAAAVTEGLRFQLVSVGLWEWAVYVALTAEGDPDRRAATARELVLRHGYRVLGAPVNSPDAERGRFLEDLGIPRAWLHEAAAVRA 2652
V L+ R+ DA A +G RL+++L+ + VG R + Q W D + +E V LL G +R R + +C LDW R LG+ LW+ +A VA A+ Y+ + E P A Y L P Y+ G S G+D + RD CV LL +Y R+ L L+P + TPD +DYR SWH+ V++AL + + + QL +VGLWEWA++V L + DP R A REL+ RH V +P + A+ ++ L +P W+H+A AVR+
Sbjct: 1307 VFSYLTGGRISDACRLAQKSGDHRLSLLLSQM------VGSQEVRD---LITLQLVDWNKLQVDHYIQEERLRVFCLLSGTPVWRSSDNRSINVCS--------QLDWKRTLGIHLWYMLPPTAT---------------VAQALHMYEQAFQEQEGGEPYACYPLPP------------------YLEDCGFSF----GDDPSAKFCSLQRDVCVH--LLKLYSERQ-------------YDLCQLLDPSSATPDPLDYRLSWHMWMVLQALNYTHLSGH-RQGMLHASYAAQLENVGLWEWAIFVLLHIQ-DPHVREAAVRELLNRHCV-VHDSPESL--AKENFLIQRLCLPAQWIHKAKAVRS 1599
BLAST of mRNA_E_fasciculatus_S2_contig7394.15572.1 vs.
Match: nuclear (pore complex protein Nup98-Nup96 isoform X1 n=4 Tax=Galeoidea TaxID=119195 RepID=UPI001B7EB1D4) HSP 1 Score: 91.7 bits (226), Expect = 1.030e-14 Identity = 96/362 (26.52%), Postives = 141/362 (38.95%), Query Frame = 1
Query: 1573 VLELLSVRRVHDAAAAAMAAGLPRLAVMLTAVATQGGGVGRPPARYGSRFLAQQAGQWQAAGADARMPQEAFSVVQLL-GREGFRDVGLRGLICKGASGSLRPSLDWMRQLGLCLWFGAGASAGIGGEDGDRDGGSGGGVADAIEAYDALVADGEALSPTARYFLEPTHHESAHLDKVCAELRRVYMPPTGLSLEKSGGEDRGSGRDRCVLRCLLAMYPSRKAGGGXXXXXXXSGVSLLSALEPMAVTPDVMDYRHSWHLMNVVEALGVAEVQDRAKAAAVTEGLRFQLVSVGLWEWAVYVALTAEGDPDRRAATARELVLRHGYRVLGAPVNSPDAERGRFLED-LGIPRAWLHEAAAVRA 2652
V L+ +R+ +A A +G RLA++L A GG R L+ Q W AD + +E + LL G+ ++ +C LDW R L + LW+ A I ADA+ Y E + ARY L P Y+ T + L + ++ S + + LL +Y R L L P VTPD +DYR SWHL V++A+ + ++ +A T QL +VGLWEWAV+V L R A ++L R E+ FL++ L IP W+H A ++RA
Sbjct: 1343 VFSYLTGKRISEACKLAQQSGDHRLALLLAQAA--GGHEVR-------ELLSMQLADWNHLQADPFIQEERLKIFALLAGKAVWQSSESYINVCS--------QLDWKRCLAVHLWYMLPPRASI---------------ADALNMYSEAFQGSEDIQRYARYPLPP------------------YLEDTDIDLIEVPESEKESDPHQDICYHLLKLYSDRHH-------------ELHLLLNPRTVTPDHLDYRLSWHLWMVLQAMNYTHLSEKHQAMVHTS-FAAQLEAVGLWEWAVFVLLHIPNSQQRGNAVRQQL-----NRHCTLDETEEQKEKELFLQEKLSIPPEWIHNAKSLRA 1635 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7394.15572.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7394.15572.1 >prot_E_fasciculatus_S2_contig7394.15572.1 ID=prot_E_fasciculatus_S2_contig7394.15572.1|Name=mRNA_E_fasciculatus_S2_contig7394.15572.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=1032bp MSDDDDDDDDDNDPGAAGKKAADSAKKMPPPPALGRAGRVPRPARGATSSback to top mRNA from alignment at E_fasciculatus_S2_contig7394:2109..7454- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7394.15572.1 ID=mRNA_E_fasciculatus_S2_contig7394.15572.1|Name=mRNA_E_fasciculatus_S2_contig7394.15572.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5346bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7394:2109..7454- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7394:2109..7454- >mRNA_E_fasciculatus_S2_contig7394.15572.1 ID=mRNA_E_fasciculatus_S2_contig7394.15572.1|Name=mRNA_E_fasciculatus_S2_contig7394.15572.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=3096bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7394:2109..7454- (Ectocarpus fasciculatus EfasUO2)back to top |