mRNA_E_fasciculatus_S2_contig738.15562.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig738.15562.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ4_ECTSI) HSP 1 Score: 760 bits (1963), Expect = 1.820e-270 Identity = 423/473 (89.43%), Postives = 433/473 (91.54%), Query Frame = 1
Query: 667 VANEKDRVPPLTSGARMGLDVISSLEGMVADEGEVFDSCFRELVRQERCACRQRGDLMEVMRGHYASLVEEVVRHLSRLKGSLETTLAEEERLKQQVYHVQRLAKLLAEDAKVNDDHRQTLATMAPTELERYIDSRIRPGATAANATVPSPTSPTKLNGEGGAGNAVEGSASNISGPSNEEIGGKTAPRESAESLAGVLSEVRRAHNRVEARNATEQTDRTRHMMASMKVDMLQDMIEERAAARREQERREKWRQYNAATAIKNWWRKVNPPEWEDEDRQYAATLIQANIRGKIARIKRKRLLEKFRMTRGATMLQNMYRRYLAVRERRRRARIVKLALGAGLRTLGRAMNELEAKAAALQACEQSSKKRGTKTSGVPDGSPPSPALPATECTAEAVARGAG---EKPEEGSVSSLVARLKALEHVLEQQEERHRRELSVDVEGEHGSGGWRNSAASVNSSTGGARGVAKRRR 2076
ANEKDRVP L SGARMGLDVISSLEGMV DEGEVFDSCFRELVR ERCACRQRGDLMEVMRGHYASLVEEVV+HLSRLKGSLETTLAEEERLKQQVYHVQRLAKLLAEDAKVNDDHRQ LA+MAPTELE YIDSRIRPGATAANATVPSPT PTK NGEGGAGNA EGSAS+ISGP+NEE GG APRES ESLAGVLSEVR AH RVEARNATE+TDRTRHMMASMKVDMLQDMIEERAAARREQERREKWRQYNAATAIKNWWRKVNPPEWEDEDRQYAATLIQANIRGKIARI RKRLLE+FRMTRGA MLQNMYRRYLAVRERRRRARIVKLALG+GLRTLGRAMNELEAKAAALQACEQS KKRGTKTSGV D SPPSPA ATE T EAV G G EK +E SV SLVARLKALEHVLEQ+EERHRREL D EGEHGSGGWRNS+AS NSS GGARGV KRRR
Sbjct: 2 AANEKDRVPHLMSGARMGLDVISSLEGMVTDEGEVFDSCFRELVRHERCACRQRGDLMEVMRGHYASLVEEVVKHLSRLKGSLETTLAEEERLKQQVYHVQRLAKLLAEDAKVNDDHRQKLASMAPTELELYIDSRIRPGATAANATVPSPTPPTKKNGEGGAGNAKEGSASSISGPANEETGGNAAPRESVESLAGVLSEVRPAH-RVEARNATEETDRTRHMMASMKVDMLQDMIEERAAARREQERREKWRQYNAATAIKNWWRKVNPPEWEDEDRQYAATLIQANIRGKIARIMRKRLLEEFRMTRGAIMLQNMYRRYLAVRERRRRARIVKLALGSGLRTLGRAMNELEAKAAALQACEQSRKKRGTKTSGVLDDSPPSPAGLATERTVEAVTDGIGGIGEKLKEDSVPSLVARLKALEHVLEQEEERHRRELLADSEGEHGSGGWRNSSASANSSAGGARGVPKRRR 473 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig738.15562.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig738.15562.1 >prot_E_fasciculatus_S2_contig738.15562.1 ID=prot_E_fasciculatus_S2_contig738.15562.1|Name=mRNA_E_fasciculatus_S2_contig738.15562.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=685bp MAVVFTPFKPEVDRRIARRRRRPDFQGRHHDVHAKRGGIKAGCLNVGSHCback to top mRNA from alignment at E_fasciculatus_S2_contig738:4551..14675- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig738.15562.1 ID=mRNA_E_fasciculatus_S2_contig738.15562.1|Name=mRNA_E_fasciculatus_S2_contig738.15562.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=10125bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig738:4551..14675- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig738:4551..14675- >mRNA_E_fasciculatus_S2_contig738.15562.1 ID=mRNA_E_fasciculatus_S2_contig738.15562.1|Name=mRNA_E_fasciculatus_S2_contig738.15562.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2055bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig738:4551..14675- (Ectocarpus fasciculatus EfasUO2)back to top |