mRNA_E_fasciculatus_S2_contig737.15556.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig737.15556.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDV6_ECTSI) HSP 1 Score: 2347 bits (6082), Expect = 0.000e+0 Identity = 1281/1547 (82.81%), Postives = 1331/1547 (86.04%), Query Frame = 1
Query: 1 ENQQGLVEDDPGGAVKDQENSKNEDSARSQVDLVLLQTRTLPNCEGLSRLAVLFPPPSPGTTPAIDPPQEGNEKRS-EGPLGGHRVAPHEIVSDAENVRVLVGPVIGRVGPTSAVVLVEVGAKCPVAAQRAASAARQRQGLTGTERTSPEDDVGVRLLDTLTSESREMFGGRRTGGQPGMGPRVFEFEGLTPGRRYTLRLLGVRQHDQEALEEILADVQTARPTATATLAIGAMVDASKIAKALYPLVMAEKGSGSSKPEGVPVGVRALNAFRELYRHTWNDPQMRKLLANTSATPCSVGAGDLLLPLLRRFPSGWLPLHSAPVNPACGNLKGTRARGSTTATRKWSRRRGRRRRVSMREAKEVSRCQHEGAGVAGALGVVAKAALQASKEYQEPLLGGSANYNGGNGGGFERFRKTARGESACRGPLPTFQRWGAVGVLSISVASSQVGWAFGGRDAGHGLLSRETWAWLEDFFRAPELGLQEGSGVNTLVVVTDSPLLWRSTSSFSPSVAAXXXXXXXXXXEEDHHLDEGIGRRQLPPAGRADGVASLLSLLFSWASADNDDGDKDTPTEAHTATAEGEVPAAAVVPTVASGASXXXXXXXXXXXSQRRNRAVAAGTGQARGARGRVFSVVCPATRVRMNIQSYVKDRETGRVATQWCLASKDTGDEACIPMNGSIGPRFSFTHYPQAGKAIGPGATLVRPIPDPSAPCVMFLGMVALGGXXXXXXXXXX------SGPGFAFGTLGPILGEVGTTTARVLVEVSVPMELCLTVKKSGIARNSNVSQPKGHRQELTKVIPTAHRPVVFEVSGLIADTRYELDFWPLANANEFRANLRTRPLRPSSFRIAAFGGSRHPFGFIAPTITTTAAAVTAGRVKIANYNSGRDTVDTDSGAGENVSSPGKNLLVRERWPFRALEAGAGLRVNSSGAGSEAAAISRPELNRLAAAKAESERARKHDXXXXXRXGGGYAAELSRAEDYGGGWRHPGSTALAMRLVTNESSLAEMSRESLLGNGGSDAISVCVGFGRLSAWQAMTDEVELPVQGLDLVIHLGNEINAAASLNRDEVAQVAERFAQHARLVGEKLPSKEAVDQSAGTEVSGAKVGRSPLVRPPQLPVEDPMALGERDEEDISQLEAFFIKLHDEAEKDRKRDDGDFRHRRIEEPPLVIHTQLPEDEGKENGGVSSHGVPGPDSXXXXXXXXXXXXXXXXXXXXXXXXGTITKRFDNKSVAGVDGAWELVTEEVAERVRDPYRVAWGLPWAKAVMASAPNTLLAFTPLDLDDGCQPLSSVQPVNEQGANVPLQRASTDAGRGQHLDHPACAARVREERLRAWVEYQTALASGGGKTTKKTPGLDTAXXXXXXXXXXXXXXXXXXXSDKKEADRGSYQEYGGVGVLMLDVWGNQPWRLDEAGMATAKGSDAEGPGFHPKALLSKKQEKLVKKALTSSTTNALLICSGTPMVAEPIVHPKAPPLSEAEQKSRDKALDFAKKELKKLGKAGLAEIKRMAEEEKIPKLAMLSPEEVGAMDAFYDELRPSYHWSYHSPYLQ 4620
EN+Q V+DDPGGAVK QE S++E+SA S +D VLLQTRT+PNCEGLSRLAV F PPSPGTTPA+ PPQE NEKRS EG L GHRV PH+ V E VRVLVGPVIGRVGPTSAVVLVEVGAKCPVAAQR A+AARQRQGLT ++T PEDDVGVRL+DTLTSESREMFGGRRTGG+PG+GPRVFEFEGLTPGRRYTLRLLGVRQHDQEALEEILADVQT+RPTATA LAIG MV+ASKI ALYPLVMAEKGS SS+PEGVP+GVRALNAFRELYRHTWNDPQMRKLLANTS TPCSVGAGDLLLPLLRRFPSGWLPLHSAPVNPA GNLKG RARGSTT TRKWSRRRGRRR V REAKEVSRCQHEG GVAGALG VA+AALQASKEYQE LLGGSANY GFERF ARG SACRGPLPTFQRWGAVGVL+ISVASSQVGWAFGGRDAGHGLLSRETWAWLEDFFRAPELGLQEG GVNTL++ TDSPLLWRS SSFS SV XXXX EEDHHLDEG+G RQ P GR DGV A+ADN DGDKD P EA TAE EVPAAAV PTVASGA SQRRNRA AAGTGQARG RGRVFSVVCPATRVRMNIQSYVKDRETGRVATQWCLASKDTGDEACIPMNGSIGPRFSFTHYPQAGKAIGPGATLVRPIPDPSAPCVMFLGMVALGGXXXXXXXXXX SGPGFAFGTLGPILGEVGTTTARVLVEVSVPMELCLTV+KSGIARN NVSQPKGHRQ++TKVI AHRPVVFEVSGLIADTRYELDFWPLANANEFRANLRTRPLRPSSFRIAAFGGSRHPFGFI PT+TTT AV+AGR K+ANYN+GRD D DSGAGEN +SPGK LLVRERWPFRALEAG GLRV SG E AAISRPE NR+AAAKAESERA KHD XXXX X A L AED GGGWRHP STALAM L+TN L EMSRESL GNGGSDAISVC+ FGRLSAWQAM DEVELPVQGLDL+IHLGNEINAAASLNRDEVA+VAE F+QHARL G +LPSKEAVDQSA E SGAK GRS LV+PPQLPVEDPMALGERDEEDI+QLEAF IKLHDEAEKDRKRDDGDFRHRRIEEPPL IHTQLPED+GKE+GGV SHG PDS XX GTITKRFD+ V GVDGAWELV EEVAERVRDPYRVAWGLPWAKAVMASAPNTLLAFTPLDLDDGCQ LS +Q V+E GA VP QRASTD LDHPA ARVREERLRAWVEYQTALASGGGKTTKKTPGLDTA XXXXXXXX SDK+E DRGSYQEYGGVGVLMLDVWGNQ WRLDEAGMATAKG DAEGPGFHPKALLSKKQEKLVKKALTSST NAL+ICSGTPMVAEPIVHPKAPPLSEAEQKSRDKAL+FAKKELKKLGKAGLAEIKRM EEEKIPKLAMLSPEEVGAMDAFYDELRP YHWSYHSPYLQ
Sbjct: 1255 ENRQRSVDDDPGGAVKGQEKSESEESAHSHLDQVLLQTRTVPNCEGLSRLAVAFRPPSPGTTPAVFPPQEENEKRSSEGTLEGHRVVPHQNVPHVEKVRVLVGPVIGRVGPTSAVVLVEVGAKCPVAAQRTAAAARQRQGLTDADKTPPEDDVGVRLVDTLTSESREMFGGRRTGGEPGIGPRVFEFEGLTPGRRYTLRLLGVRQHDQEALEEILADVQTSRPTATARLAIGTMVNASKIGNALYPLVMAEKGSESSRPEGVPIGVRALNAFRELYRHTWNDPQMRKLLANTSTTPCSVGAGDLLLPLLRRFPSGWLPLHSAPVNPAYGNLKGARARGSTTTTRKWSRRRGRRRTVLTREAKEVSRCQHEGGGVAGALGAVARAALQASKEYQEALLGGSANYGXXXXXGFERFSMIARGGSACRGPLPTFQRWGAVGVLNISVASSQVGWAFGGRDAGHGLLSRETWAWLEDFFRAPELGLQEGPGVNTLIIATDSPLLWRSASSFSSSVXXXXXXREPADGEEDHHLDEGVGGRQRMPPGRIDGVG---------AAADNYDGDKDAPAEAPFTTAEREVPAAAVAPTVASGALSPGGSSTQGASSQRRNRAAAAGTGQARGTRGRVFSVVCPATRVRMNIQSYVKDRETGRVATQWCLASKDTGDEACIPMNGSIGPRFSFTHYPQAGKAIGPGATLVRPIPDPSAPCVMFLGMVALGGXXXXXXXXXXXXXXATSGPGFAFGTLGPILGEVGTTTARVLVEVSVPMELCLTVQKSGIARNGNVSQPKGHRQQITKVIRIAHRPVVFEVSGLIADTRYELDFWPLANANEFRANLRTRPLRPSSFRIAAFGGSRHPFGFIVPTVTTTTPAVSAGRRKVANYNTGRDMADPDSGAGENTASPGKTLLVRERWPFRALEAGGGLRVIGSGVDGEDAAISRPESNRVAAAKAESERAWKHDSXXXXXXXXXDTAGLECAEDSGGGWRHPVSTALAMGLLTNGPCLEEMSRESLFGNGGSDAISVCLRFGRLSAWQAMADEVELPVQGLDLIIHLGNEINAAASLNRDEVAKVAEHFSQHARLGGVELPSKEAVDQSARKEASGAKAGRSLLVKPPQLPVEDPMALGERDEEDIAQLEAFIIKLHDEAEKDRKRDDGDFRHRRIEEPPLAIHTQLPEDQGKEDGGVPSHGGASPDSERGGGARDSXXGDGGGGECN----GTITKRFDDNRVDGVDGAWELVAEEVAERVRDPYRVAWGLPWAKAVMASAPNTLLAFTPLDLDDGCQSLS-MQRVDEHGATVPRQRASTDGV--VDLDHPASVARVREERLRAWVEYQTALASGGGKTTKKTPGLDTAASADDKGVNDXXXXXXXXKSDKRETDRGSYQEYGGVGVLMLDVWGNQSWRLDEAGMATAKGGDAEGPGFHPKALLSKKQEKLVKKALTSSTANALVICSGTPMVAEPIVHPKAPPLSEAEQKSRDKALNFAKKELKKLGKAGLAEIKRMEEEEKIPKLAMLSPEEVGAMDAFYDELRPCYHWSYHSPYLQ 2785
BLAST of mRNA_E_fasciculatus_S2_contig737.15556.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY9_9PHAE) HSP 1 Score: 1878 bits (4865), Expect = 0.000e+0 Identity = 1117/1643 (67.99%), Postives = 1176/1643 (71.58%), Query Frame = 1
Query: 4 NQQGLVEDDPGGAVKDQENSKNEDSARSQVDL---------------------------------------------------------------------VLLQTRTLPNCEGLSRLAVLFPPPSPGTTPAIDPPQEGNEKRS-EGPLGGHRVAPHEIVSDAENVRVLVGPVIGRVGPTSAVVLVEVGAKCPVAAQRAASAARQRQGLTGTERTSPEDDVGVRLLDTLTSESREMFGGRRTGGQPGMGPRVFEFEGLTPGRRYTLRLLGVRQHDQ------------------EALEEILADVQTARPTATATLAIGAMV---DASKIAKALYPLVMAEKGSGSSKPEGVPVGVRALNAFRELYRHTWNDPQ--MRKLLANTSATPCSVGAGDLLLPLLRRFPSGWLPLHSAPVNPACGNLKGTRARGSTTATRKWSRRRGRRRRVSMREAKEVSRCQHEGAGVAGALGVVAKAALQASKEYQEPLLGGSANYNGGNGGGFERFRKTARGESACRGPLPTFQRWGAVGVLSISVASSQVGWAFGGRDAGHGLLSRETWAWLEDFFRAPELGLQEGSGVNTLVVVTDSPLLWRSTSSFSPSVAAXXXXXXXXXXEEDHHLDEGIGRRQLPPAGRADGV----------------------------------------ASLLSLLFSWASADNDDGDKDTPTEAHTATAEGEVPAAAVVPTVASGASXXXXXXXXXXXSQRRNRAVAAGTGQARGARGRVFSVVCPATRVRMNIQSYVKDRETGRVATQWCLASKDTGDEACIPMNGSIGPRFSFTHYPQAGKAIGPGATLVRPIPDPSAPCVMFLGMVALGGXXXXXXXXXXSG------PGFAFGTLGPILGEVGTTTARVLVEVSVPMELCLTVKKSGIARNSNVSQPKGHRQELTKVIPTAHRPVVFEVSGLIADTRYELDFWPLANANEFRANLRTRPLRPSSFRIAAFGGSRHPFGFIAPTITTTAAAVTAGRVKIANYNSGRDTVDTDSGAGENVSSPGKNLLVRERWPFRALEAGAGLRVNSSGAGSEAAAISRPELNRLAAAKAESERARKHDXXXXXRXGGGYAAELSRAEDYGGGWRHPGSTALAMRLVTNESSLAEMSRESLLGNGGSDAISVCVGFGRLSAWQAMTDEVELPVQGLDLVIHLGNEINAAASLNRDEVAQVAERFAQHARLVGEKLPSKEAVDQSAGTEVSGAKVGRSPLVRPPQLPVEDPMALGERDEEDISQLEAFFIKLHDEAEKDRKRDDGDFRHRRIEEPPLVIHTQLPEDEGKENGGVSSHGVPGPDSXXXXXXXXXXXXXXXXXXXXXXXXGTITKRFDNKSVAGVDGAWELVTEEVAERVRD-PYRVAWGLPWAKAVMASAPNTLLAFTPLDLDDGCQPLSSVQPVNEQGANVPLQRASTDAGRGQHLDHPACAARVREERLRAWVEYQTALASGGGKTTKKTPGLDTAXXXXXXXXXXXXXXXXXXXSDKKEADRGSYQEYGGVGVLMLDVWGNQPWRLDEAGMATAKGSDAEGPGFHPKALLSKKQEKLVKKALTSSTTNALLICSGTPMVAEPIVHPKAPPLSEAEQKSRDKALDFAKKELKKLGKAGLAEIKRMAEEEK 4512
NQQ V+DDPGGA K QE S++EDSA +D VLLQTRT+PNCEGLSRLAV+FPPPSPGTTPA P QEGNEKRS EG L GHRV PH+IV AENVRVLVGPVIGRVGPTSAVVLVEVGAKCPVAA+R A+A RQRQ LT ++T PEDDVGVRL+DTLTSESREMFGGRRTGGQPG+GPRVFEFEGLTPGRRYTLRLLGVR+HDQ EALEEILADVQTARPTATATLAIGAMV +ASKI LYPLVMAEKGSGSSKPEGVP+GVRALNAFRELYRHTWNDPQ MRKLLANTS TPCSVGAGDLLLPLLRRFPSGWLPLHSAPVNPA GNLKG RARGS T TRKWSRRRGRRRRV MREA+EVSRCQHEG GVAGALG VAKAALQASKEYQ+ LLGGSAN +GG GGGFER AR ES CR PLPTFQRWGAVGVL+ISV SSQVGWA GGRDAGHGLLSRETWAWLEDFFRA ELGLQEG GVNTL+V TDSPLLWRS SSFS XXXXX E+DHHLDEG+GRRQ P GR DGV ASLLSLLFSWA+AD+ D DKD P EA TAE EVPA+ V PTVASGAS XXXXX S+RRNRA AAGTGQARGARGRVFS+VCPATRVRMNIQSYVKDRETGRVATQWCLASK+TGDEACIPMNGSIGPRFSFTHYPQ GKA GPGATLVRPIPDPSAPCVMFLGMVALGG G PGFAFGTLGPILGEVGTTTARVLVEVSVPMELC+TV+KSGIARN NVSQ KGHRQ++TKVI AHRPVVFEVSGLIADTRYELDFWPLANANEFRANLRTR LRPSSFRIAAFGGSRHPFGFIAPT+T +AAAV+AGR K+ANYN+GRDT D DS AGEN +SP K LLVRERWPF ALEAG GLRV SG + AAISRPE NR+AAAK ES XXXXX X A L AED+GGGWRHP ST+LAM L+TN L EMSRE RDEVA+VAE F+QHARL G + PSKEAVDQSA E SG KVGRS LVRPPQLPVEDPMALGERDEEDISQLEAF I KDRKRDDGDFRHRRIEEPPL IHTQL EDEGKE+GGV SHG PGPDS XXXXXXXXXXX GTITKRFD+ V GVDGAWELV EEV R P + G A + + N A + + L V P +GA VP QRASTD G +HLDHPAC ARVREERLRAWVEYQTALA GGGKTTKKTP LDT XXXXXXX SDK+E DRGSYQEYGGVGVLMLDVWGNQ WRLDEAGMATAKG DAEGPGFHPKALLSKK + APPLSEAEQKSRDKALDFAKKELKKLGKAG AE+KRM EEEK
Sbjct: 1361 NQQESVDDDPGGAFKGQEKSESEDSAHDHLDQGLPISTEAEAGANVKRRSRDEGDSMQRKVPAAVDRMRGSPNNGRSPPNTIAPSTPTGLTPPLLPLPPSEVLLQTRTVPNCEGLSRLAVVFPPPSPGTTPAYVPLQEGNEKRSSEGTLEGHRVLPHQIVPHAENVRVLVGPVIGRVGPTSAVVLVEVGAKCPVAARRTAAADRQRQELTDADKTPPEDDVGVRLVDTLTSESREMFGGRRTGGQPGIGPRVFEFEGLTPGRRYTLRLLGVRRHDQVGESPPAMWALSPQIVPKEALEEILADVQTARPTATATLAIGAMVSQVNASKIGNVLYPLVMAEKGSGSSKPEGVPIGVRALNAFRELYRHTWNDPQTEMRKLLANTSTTPCSVGAGDLLLPLLRRFPSGWLPLHSAPVNPAYGNLKGPRARGSITMTRKWSRRRGRRRRVLMREAREVSRCQHEGGGVAGALGAVAKAALQASKEYQKALLGGSANCSGGGGGGFERLSNIAREESTCR-PLPTFQRWGAVGVLNISVTSSQVGWALGGRDAGHGLLSRETWAWLEDFFRASELGLQEGPGVNTLIVATDSPLLWRSASSFSSXXXXXXXXXEPAGGEKDHHLDEGVGRRQRAPPGRVDGVGAGACGQRDEERKRSPFSDVSRQGSRNAPPPSWSAHPREVASLLSLLFSWAAADSCDVDKDAPAEAPITTAEREVPASTVAPTVASGASSXXXXXTQGAYSRRRNRAAAAGTGQARGARGRVFSIVCPATRVRMNIQSYVKDRETGRVATQWCLASKETGDEACIPMNGSIGPRFSFTHYPQGGKATGPGATLVRPIPDPSAPCVMFLGMVALGGGGGSGEGRSIGGGSATRGPGFAFGTLGPILGEVGTTTARVLVEVSVPMELCMTVQKSGIARNGNVSQMKGHRQQITKVIRIAHRPVVFEVSGLIADTRYELDFWPLANANEFRANLRTRQLRPSSFRIAAFGGSRHPFGFIAPTVTASAAAVSAGRRKVANYNTGRDTADPDSRAGENTASPEKTLLVRERWPFCALEAGGGLRVIGSGVDGKDAAISRPESNRVAAAKTESXXXXXXXXXXXXXXXXXDTAGLGCAEDFGGGWRHPVSTSLAMGLLTNGPCLEEMSRE------------------------------------------------------RDEVAEVAEHFSQHARLGGVEFPSKEAVDQSAPMEASGDKVGRSLLVRPPQLPVEDPMALGERDEEDISQLEAFII-------KDRKRDDGDFRHRRIEEPPLAIHTQLLEDEGKEDGGVPSHGGPGPDSDRGDDASDXXXXXXXXXXXN----GTITKRFDDDRVDGVDGAWELVAEEVGGGARARPVSCSMG-----ASVGQSGNGECAQYFTRVHSIGEFLQEVIPSVFEGATVPRQRASTDGGGVRHLDHPACVARVREERLRAWVEYQTALAPGGGKTTKKTPALDTVASANDKSGTDGXXXXXXXKSDKRETDRGSYQEYGGVGVLMLDVWGNQSWRLDEAGMATAKGGDAEGPGFHPKALLSKKAQ--------------------------------APPLSEAEQKSRDKALDFAKKELKKLGKAGQAEMKRMDEEEK 2900 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig737.15556.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig737.15556.1 >prot_E_fasciculatus_S2_contig737.15556.1 ID=prot_E_fasciculatus_S2_contig737.15556.1|Name=mRNA_E_fasciculatus_S2_contig737.15556.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=1543bp ENQQGLVEDDPGGAVKDQENSKNEDSARSQVDLVLLQTRTLPNCEGLSRLback to top mRNA from alignment at E_fasciculatus_S2_contig737:16065..28336- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig737.15556.1 ID=mRNA_E_fasciculatus_S2_contig737.15556.1|Name=mRNA_E_fasciculatus_S2_contig737.15556.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=12272bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig737:16065..28336- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig737:16065..28336- >mRNA_E_fasciculatus_S2_contig737.15556.1 ID=mRNA_E_fasciculatus_S2_contig737.15556.1|Name=mRNA_E_fasciculatus_S2_contig737.15556.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=4629bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig737:16065..28336- (Ectocarpus fasciculatus EfasUO2)back to top |