mRNA_E_fasciculatus_S2_contig7359.15545.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7359.15545.1 vs.
Match: RING-CH-type (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR1_ECTSI) HSP 1 Score: 758 bits (1957), Expect = 2.760e-260 Identity = 492/550 (89.45%), Postives = 497/550 (90.36%), Query Frame = 1
Query: 4 SLPSSVTHAVSKYLDPHVLASLGGRSE-YLAFRDVVQGWYVMVTSSEEQEKENTLRLPDLATICLGYMVMSSMVFMWRGIINAISNRTNTQILLRAKKAMRVIAAVVKVGLLLSLKMLLLPLLLGVCLDATTLPLFGCTGEARARFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPEVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRLVGTLFPAVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKYQNRIGEMQHTWLVAVCGRLGLTRFVLPQPIVARFPRPAPP-TTFGFSTFDAADDGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLGASGGRESGXXXXXXXXXXXXXXXXXXXXXXXGAAVKAXXXXXXXXXXXXXXXXXXXXXXXXXPGWDDPAGVAQGRWAWGAEPPGEVQLNLAPRRRHGARAVPLVAVLLLAAWATVLVAALCLVVLPFLLGRLLFSLIHLPRRWTHDTASFAVGLTLLKAALLQVEAGLVHGGWAEVS 1647
S+ +SVTHAVSKYLDPHVL+SLGGRSE YLA RDVVQGWY + TSSEEQE NTLRLPDLATICLGYMVMSSMVFMWRGIINAISNRTNTQILLRAKKAMRVIAAVVKVGLLLSLKMLLLPLLLGVCLDATTLPLFGCTGEARARFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPEVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRLVGTLFPAVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKYQNRIGEMQH+WLVAVCGRLGLTRFVLPQPIVAR PRP PP TTFGFSTFD AD XXXXXXXXXXXX RGLGAS XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX GWDDPAGVAQGRWAWGAEPPGEVQLNLAPRRRHGARAVPLVAVLLLAAWATVLVAALCLVVLPFLLGRLLFSLIHLPRRWTHDTASFAVGLTLLKAALLQVEAGL HG WAEVS
Sbjct: 648 SIGASVTHAVSKYLDPHVLSSLGGRSELYLALRDVVQGWYELATSSEEQE--NTLRLPDLATICLGYMVMSSMVFMWRGIINAISNRTNTQILLRAKKAMRVIAAVVKVGLLLSLKMLLLPLLLGVCLDATTLPLFGCTGEARARFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPEVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRLVGTLFPAVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKYQNRIGEMQHSWLVAVCGRLGLTRFVLPQPIVARLPRPGPPPTTFGFSTFDDADG-------XXXXXXXXXXXXANGATAAPGSTLRRRSTSSRGLGAS---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWDDPAGVAQGRWAWGAEPPGEVQLNLAPRRRHGARAVPLVAVLLLAAWATVLVAALCLVVLPFLLGRLLFSLIHLPRRWTHDTASFAVGLTLLKAALLQVEAGLAHGSWAEVS 1185
BLAST of mRNA_E_fasciculatus_S2_contig7359.15545.1 vs.
Match: RING-CH-type (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWM1_9PHAE) HSP 1 Score: 722 bits (1864), Expect = 2.420e-242 Identity = 471/532 (88.53%), Postives = 476/532 (89.47%), Query Frame = 1
Query: 4 SLPSSVTHAVSKYLDPHVLASLGGRSE-YLAFRDVVQGWYVMVTSSEEQEKENTLRLPDLATICLGYMVMSSMVFMWRGIINAISNRTNTQILLRAKKAMRVIAAVVKVGLLLSLKMLLLPLLLGVCLDATTLPLFGCTGEARARFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPEVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRLVGTLFPAVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKYQNRIGEMQHTWLVAVCGRLGLTRFVLPQPIVARFPRPAPP-TTFGFSTFDAADDGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLGASGGRESGXXXXXXXXXXXXXXXXXXXXXXXGAAVKAXXXXXXXXXXXXXXXXXXXXXXXXXPGWDDPAGVAQGRWAWGAEPPGEVQLNLAPRRRHGARAVPLVAVLLLAAWATVLVAALCLVVLPFLLGRLLFSLIHLPRRWTHDTASFAVGLTLLKA 1593
S+ +SVTHAVSKYLDPHVLASLGGRSE Y A RDV+QGWY + TSSEEQE NTLRLPDLATICLGYMVMSSMVFMWRGIINAISNRTNTQILLRAKKAMRVIAAVVKVGLLLSLKMLLLPLLLG CLDATTLPLFGCTGEAR RFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHP+VLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRLVGTLFPAVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKYQNRIGEMQHTWLVAVCGRLGLTRFVLPQPIVAR PRP PP TTFGFSTFD AD XXXXXXXXXXX RGLGASG XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX GWDDPAGVAQGRWAWGAEPPGEVQLNLAPRRRHGARAVPLVAVLLLAAWATVLVAALCLVVLPFLLGRLLFSLIHLPRRWTHDTASFAVGLTLLKA
Sbjct: 732 SIGASVTHAVSKYLDPHVLASLGGRSELYPALRDVLQGWYELATSSEEQE--NTLRLPDLATICLGYMVMSSMVFMWRGIINAISNRTNTQILLRAKKAMRVIAAVVKVGLLLSLKMLLLPLLLGGCLDATTLPLFGCTGEARVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRLVGTLFPAVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKYQNRIGEMQHTWLVAVCGRLGLTRFVLPQPIVARLPRPGPPPTTFGFSTFDDADX-------XXXXXXXXXXXEANGATAAPGSTLRRRSVSSRGLGASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---GWDDPAGVAQGRWAWGAEPPGEVQLNLAPRRRHGARAVPLVAVLLLAAWATVLVAALCLVVLPFLLGRLLFSLIHLPRRWTHDTASFAVGLTLLKA 1251
BLAST of mRNA_E_fasciculatus_S2_contig7359.15545.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW40_9STRA) HSP 1 Score: 322 bits (825), Expect = 2.580e-94 Identity = 184/317 (58.04%), Postives = 232/317 (73.19%), Query Frame = 1
Query: 4 SLPSSVTHAVSKYLDPHVLASLGGRSEYLAFRDVVQGWYVMVT--SSEEQEKENTLRLPDLATICLGYMVMSSMVFMWRGIINAISNRTNTQILLRAKKAMRVIAAVVKVGLLLSLKMLLLPLLLGVCLDATTLPLFGCTGEARARFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPEVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRLVGTLFPAVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKYQNRIGEMQHTWLVAVCGRLGLTRFVLPQPIVARFPRPAP 948
S+ SS+ +V + +D VL + A V QG +V ++ ++++TL+LPDL TI LGY+VMS M+FMWR ++A S RT+ Q++ R + + AAVVKVG+LL LKMLLLPLLLGVCLDA TL LF + R F AQ+LVGSLLLHWVLGITFMLFVTVSVLQLREV+HP++ + IIRPQEPHPDLLGSLLQESG THARRM MSLAIY+ L+ +FV +PT +V T P +P++L L Y PQLQ+PVELVI HL++L FLE+++NRIGE+QH WLV V G LGLTR++LP P + P AP
Sbjct: 502 SIGSSILASVRRNVDSPVLLA--------ALELVPQGLRQVVDDFATTAAKEDHTLQLPDLGTIALGYLVMSCMIFMWRAAVSAASQRTSLQLMSRVRLILDCTAAVVKVGILLFLKMLLLPLLLGVCLDAATLRLFTASAAERVHFTAQNLVGSLLLHWVLGITFMLFVTVSVLQLREVLHPDIFAAIIRPQEPHPDLLGSLLQESGATHARRMIMSLAIYVFLLFVFVSLPTSMVLTWAPTAVPLELNLAYIAPQLQVPVELVIFHLSVLGFLERFKNRIGELQHIWLVRVSGALGLTRYLLPLPRLEAGPEGAP 810
BLAST of mRNA_E_fasciculatus_S2_contig7359.15545.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CYG7_9STRA) HSP 1 Score: 294 bits (753), Expect = 2.060e-85 Identity = 165/304 (54.28%), Postives = 224/304 (73.68%), Query Frame = 1
Query: 4 SLPSSVTHAVSKYLDPHVLASLGGRSEYLAFRDVVQGWYVMVTSSEEQEKENTLRLPDLATICLGYMVMSSMVFMWRGIINAISNRTNTQILLRAKKAMRVIAAVVKVGLLLSLKMLLLPLLLGVCLDATTLPLFGCTGEARARFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPEVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRLVGTLFPA-VMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKYQNRIGEMQHTWLVAVCGRLGLTRFVLP 912
S+ SSV + Y++ V+ +L + YL + +V+ + SS QE+++TL+LPDL ++ LGY+VMS M+F WR I++A+ T ++ R + A+ AAVVKVG+LL LKMLLLPLLLGVCLDA+TL +FG + + R RF AQ+LVGSLLLHWVLGITFMLFVTVSVLQLREV+HP++L+ +IRPQ+PH LL+ESG THARRM MSLAIY+ L+ + V +PT + P ++PVQL+ Y +PQ Q+P+ELV+ HL++LAFLE+++N+IGE+QH WLV C LGLT F+LP
Sbjct: 322 SIGSSVLSTLGSYVNSPVMVAL---NNYLVPQTLVK--VLKEISSTAQEEDHTLQLPDLFSMALGYLVMSLMIFTWRSIVSAVCQGTPMPLIGRIRLALDCTAAVVKVGILLFLKMLLLPLLLGVCLDASTLMVFGTSAKDRIRFTAQNLVGSLLLHWVLGITFMLFVTVSVLQLREVMHPDILASVIRPQDPHXXXXXXLLRESGGTHARRMVMSLAIYIMLLFLLVHLPTLVFQACAPPHILPVQLQFSYLLPQFQVPLELVMFHLSVLAFLERFKNKIGELQHAWLVRACRFLGLTHFLLP 620
BLAST of mRNA_E_fasciculatus_S2_contig7359.15545.1 vs.
Match: RING-CH-type (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH4_9STRA) HSP 1 Score: 278 bits (711), Expect = 5.570e-78 Identity = 219/600 (36.50%), Postives = 263/600 (43.83%), Query Frame = 1
Query: 133 SSEEQEKENTLRLPDLATICLGYMVMSSMVFMWRGIINAISN---RTNTQILLRAKKAMRVIAAVVKVGLLLSLKMLLLPLLLGVCLDATTLPLFGCTGEARARFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPEVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRLVG--------------------------------------------TLFPAVMPVQ----------------LELRYGMPQLQIPVELVILHLAMLAFLEKYQ----------------NRIGEMQHTWLVAVCGRLGLTRFVLPQPIVARFPRPAPPTTFGFSTFDAADDGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLGASGGRESGXXXXXXXXXXXXXXXXXXXXXXXGAAVKAXXXXXXXXXXXXXXXXXXXXXXXXXPGWDDPAGVAQ-----------------------------------------GRWAWGAEPPGEVQLNLAPRRRHGAR--AVPLVAVLLLAAWATVLVAALCLVVLPFLLGRLLFSLIHLPRRWTHDTASF 1566
+S +++TL+L DL TICLGY ++ A R L RA++AMRV+AAVVKVGLLLSLKMLLLPLLLG CLDA LP+F + R F+ +L GSLLLHWV+GITFMLFVTVSVLQLREVVHP+VL+ +IRPQEPHPDLLGSLLQESGRTHARRMAMSLAIY+AL+L+FVWVP+R+ P V P L L+Y +PQLQ+P+ELV+ HLAMLAFLE+Y+ + IG QH WLV C RLGLTR++LP PI+AR T D GR +G G PGWDDPAG Q GRWAWG E G V+ +LAPRR R P +A LL AW L V +PF LGR F+ + +P W+HD +F
Sbjct: 701 ASASAAEDHTLQLADLLTICLGYAAEVCTPRAAARVLRACKRDRGRVAVLTLQRARRAMRVLAAVVKVGLLLSLKMLLLPLLLGACLDAAALPIFAASPADRLHFLRTNLAGSLLLHWVMGITFMLFVTVSVLQLREVVHPDVLAGVIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYVALLLLFVWVPSRIAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAALPGVPPAXXXXXXXXXXXXXXXXXLRLQYLVPQLQVPMELVVFHLAMLAFLERYKXXXXXXXXXXXXXXXXDSIGRTQHEWLVRWCQRLGLTRYLLPLPILAR-------------TLD-------------------------------------------------GRPAGPENPLVRLPVAGGRPDLPYDVVPGGDAPIALDSGLRGSDEDDGIVVGAPLVRPPPGWDDPAGAHQVMSAAAFEVPKGLDFTILLYGTAGFTIFGTAXXXXXXXXXXGRWAWGGEYKGPVERSLAPRRSPQGRLGVAPPMAALLAVAWVHTLARCATTVCVPFALGRAAFAALRVPLAWSHDPFAF 1238
BLAST of mRNA_E_fasciculatus_S2_contig7359.15545.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U493_9STRA) HSP 1 Score: 252 bits (643), Expect = 7.390e-71 Identity = 151/266 (56.77%), Postives = 185/266 (69.55%), Query Frame = 1
Query: 151 KENTLRLPDLATICLGYMVMSSMVFMWRGIINAISNRTNTQILLRAKKAMRVI---AAVVKVGLLLSLKMLLLPLLLGVCLDATTLPLFGCTGEARARFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPEVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRLVGT---------LFPAVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKYQNRIGEMQHTWLVAVCGRLGLTRFVLP 912
+E+TL+LPDL I LGY++MS+MVF WR I+ A+ R L K +R++ AAVVKVG+LL KM L PLLLG+ LDA T + G R RF ++LVG+LLLHWV GITFMLFVTVSVLQLREV+HP++L+ IIRPQEP PDLLGSLLQESG THARRMA+SL IY+ L+L+FV++P L+ LF L Y PQLQIP EL+I HLAMLAFLE +N IG +Q+ WL C LGLTR++LP
Sbjct: 175 EEHTLQLPDLGVILLGYLLMSAMVFTWRTIVCAVCKRMAVTALPMLGKVVRMLECTAAVVKVGVLLFSKMALCPLLLGLWLDAATTQVIGPDHAVRVRFATENLVGALLLHWVAGITFMLFVTVSVLQLREVLHPDILARIIRPQEPQPDLLGSLLQESGLTHARRMAISLGIYVLLLLLFVYLPAELLAFAGFNATGNGLF------HLNFFYLAPQLQIPFELIIFHLAMLAFLEHTKNAIGRLQYMWLRPFCKALGLTRYLLP 434
BLAST of mRNA_E_fasciculatus_S2_contig7359.15545.1 vs.
Match: RING-CH-type (domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1W8_9STRA) HSP 1 Score: 252 bits (644), Expect = 6.860e-70 Identity = 149/260 (57.31%), Postives = 184/260 (70.77%), Query Frame = 1
Query: 151 KENTLRLPDLATICLGYMVMSSMVFMWRGIINAISNRTNTQILLRAKKAMRVI---AAVVKVGLLLSLKMLLLPLLLGVCLDATTLPLFGCTGEARARFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPEVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRLV---GTLFPAVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKYQNRIGEMQHTWLVAVCGRLGLTRFVLP 912
+E+TL+LPDL I LGY++MS+MVF WR I+ A+ R L K +R++ AAVVKVG+LL KM L PLLLG+ LDA T + G R RF ++LVG+LLLHWV GITFMLFVTVSVLQLREV+HP++L+ IIRPQEP PDLLGSLLQESG THARRMA+SL IY+ L+L+FV++P L+ G + Y PQLQIP EL+I HLAMLAFLE +N IG +Q+ WL C LGLTR++LP
Sbjct: 388 EEHTLQLPDLGVILLGYLLMSAMVFTWRSIVCAVCKRMAVTALPMLGKVVRMLECTAAVVKVGVLLFSKMALCPLLLGLWLDAATTQVIGPDHAVRVRFATENLVGALLLHWVAGITFMLFVTVSVLQLREVLHPDILARIIRPQEPQPDLLGSLLQESGLTHARRMAISLGIYVLLLLLFVYLPAELLAFAGFNATGTGLFHINFFYLAPQLQIPFELIIFHLAMLAFLEHTKNAIGRLQYMWLRPFCKVLGLTRYLLP 647
BLAST of mRNA_E_fasciculatus_S2_contig7359.15545.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FWY8_9STRA) HSP 1 Score: 235 bits (600), Expect = 1.640e-63 Identity = 151/319 (47.34%), Postives = 200/319 (62.70%), Query Frame = 1
Query: 19 VTHAVSKYLDPHVLASLGGRSEYLAF-RDVVQGWYVMVTSSEEQEKENTLRLPDLATICLGYMVMSSMVFMWRGII------------NAIS---NRTNTQILLRAKKAMRVIAAVVKVGLLLSLKMLLLPLLLGVCLDATTLPLFGCTGEARARFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPEVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRLV----GTLFPAVMPVQLELRYGMP-QLQIPVELVILHLAMLAFLEKYQNRIGEMQHTWLVAVCGRLGLTRFVLP 912
V H + + P V ++ R + ++ + W V ++ Q ++ L+LPDLATI GY M +F+ I+ N + N T + ++ AA+ KV LL LKMLLLPL+LG LD TTLPLF T + R +F +L G+LLLHWV GITFML VTVSVLQLREV+HP++L+ +IRPQEP PDLLG+LLQ+ THA+RM +SLAIY+AL+ +FVWVP LV G+ F + +L+ Y +P QLQ+PVEL + HL MLAFLEKY+N IGEMQH WLV +CG+LG+ VLP
Sbjct: 347 VPHEIGRIFWPAVRQTVAARIDLQQLPHNLTRTWDVYEKAA--QHHDSILQLPDLATILAGYFTMGVSIFVCHAILAYAVKKRKQATDNTLDEDENDTRWWVAMKMAGVAECFAAIFKVATLLFLKMLLLPLVLGAWLDITTLPLFQHTLDHRLQFAGCNLFGALLLHWVAGITFMLLVTVSVLQLREVLHPDLLAQMIRPQEPQPDLLGNLLQDRVATHAKRMTLSLAIYIALLGVFVWVPAALVHRVGGSHFLPFL--RLQFCYLLPHQLQVPVELFMFHLCMLAFLEKYKNHIGEMQHYWLVYICGKLGIVESVLP 661
BLAST of mRNA_E_fasciculatus_S2_contig7359.15545.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MEA0_9STRA) HSP 1 Score: 229 bits (583), Expect = 3.050e-62 Identity = 130/209 (62.20%), Postives = 157/209 (75.12%), Query Frame = 1
Query: 310 AAVVKVGLLLSLKMLLLPLLLGVCLDATTLPLFGCTGEARARFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPEVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRL-----VGTLFPAVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKYQNRIGEMQHTWLVAVCGRLGLTRFVLPQPI 921
AA+VKVG+LL LKMLLLPLLLG+ LDA+TL LFG + R + + L GS+LLHWV GITFML VTVSVLQLREV HP++L+ IIRPQEP PDLLG+LLQESG THA+RM +SL IY AL+ + VW+P RL +G P P L +PQLQ+PVEL++ HL+MLAFLEKY+N IGEMQH WLV +C +GLT VLPQ +
Sbjct: 7 AAIVKVGVLLFLKMLLLPLLLGIWLDASTLSLFGSSVNERILYAGKDLFGSILLHWVAGITFMLIVTVSVLQLREVTHPDLLASIIRPQEPQPDLLGNLLQESGTTHAKRMVLSLCIYAALLSIHVWLPARLLVALGIGRHLPFFRPKFWFL--FLPQLQVPVELLVFHLSMLAFLEKYKNHIGEMQHYWLVFICRWMGLTDHVLPQEV 213
BLAST of mRNA_E_fasciculatus_S2_contig7359.15545.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W2J4_9STRA) HSP 1 Score: 231 bits (588), Expect = 9.340e-62 Identity = 149/329 (45.29%), Postives = 195/329 (59.27%), Query Frame = 1
Query: 133 SSEEQEKENTLRLPDLATICLGYMVMSSMVFMWRGIIN----------------AISNRT-------------------------------------------NTQILLRAKKAMRV--IAAVVKVGLLLSLKMLLLPLLLGVCLDATTLPLFGCTGEARARFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPEVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRL-----VGTLFPAVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKYQNRIGEMQHTWLVAVCGRLGLTRFVLPQPI 921
++E + +L+LPDLATI LGY+ M+ MVF W+G ++ A +R + Q+ + + A+ + AA+VKVG+LL LKMLLLPLLLG+ LDA+TL LFG + R + L GS+LLHWV GITFML VTVSVLQLREV HP++L+ +IRPQEP PDLLG+LLQESG THA+RM +SL IY AL+L+ VW+P RL +G P P L +PQLQ+PVEL++ HL+MLAFLEKY+N IGEMQH WLV +C + LT +LP+ +
Sbjct: 572 NTESKRLHTSLQLPDLATIALGYLSMAFMVFFWKGALSLYKQFGKNADNDGAGEAAQDRAVNREERLDMHHGRRNLFQDVDGDQDDFADDEFELEDLQNDPPIDVQVAISQRLALVLDCAAAIVKVGVLLFLKMLLLPLLLGIWLDASTLSLFGSSLNERILYAGSDLFGSILLHWVAGITFMLIVTVSVLQLREVAHPDLLARVIRPQEPQPDLLGNLLQESGATHAKRMLLSLGIYAALLLIHVWLPARLLVALGIGRHLPFFRPKFWFL--FLPQLQVPVELLVFHLSMLAFLEKYKNHIGEMQHYWLVFMCKWMCLTDHILPREV 898 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7359.15545.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7359.15545.1 >prot_E_fasciculatus_S2_contig7359.15545.1 ID=prot_E_fasciculatus_S2_contig7359.15545.1|Name=mRNA_E_fasciculatus_S2_contig7359.15545.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=549bp LSLPSSVTHAVSKYLDPHVLASLGGRSEYLAFRDVVQGWYVMVTSSEEQEback to top mRNA from alignment at E_fasciculatus_S2_contig7359:425..7543+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7359.15545.1 ID=mRNA_E_fasciculatus_S2_contig7359.15545.1|Name=mRNA_E_fasciculatus_S2_contig7359.15545.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7119bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7359:425..7543+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7359:425..7543+ >mRNA_E_fasciculatus_S2_contig7359.15545.1 ID=mRNA_E_fasciculatus_S2_contig7359.15545.1|Name=mRNA_E_fasciculatus_S2_contig7359.15545.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1647bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7359:425..7543+ (Ectocarpus fasciculatus EfasUO2)back to top |