mRNA_E_fasciculatus_S2_contig7351.15542.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7351.15542.1
Unique NamemRNA_E_fasciculatus_S2_contig7351.15542.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig7351.15542.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5V7_ECTSI)

HSP 1 Score: 392 bits (1007), Expect = 8.630e-131
Identity = 193/211 (91.47%), Postives = 200/211 (94.79%), Query Frame = 2 
Query:  149 HSYPCRRCAVSTASCLETPMGDLAIDQDVTSQLLATGDFDAMTARMDEDEHSIEMHLPFIKKVMEGRPCTVVAIMVGALSAQLEQHYGRILAPYLEDMTNFFIISTDFCHWGSRFRYQPLGAAHGAIHEHISWLDHEGMKLIQSQDALGFRRYLAEHGNTICGRHSIATFINAIEASTVSICVTWVEYTQSTKVVSPQESSVSYASAVLTQ 781
            H    RRCAVSTAS LETP+GDLAIDQDVT QLLATGDFDAMTARMDEDEHSIEMHLPFIKKVMEGRPCTVVAIM+GALSA+LE+HYGRILAPYLED+TNFFIISTDFCHWGSRFRYQPLGAAH AIHEHISWLDHEGMKLIQSQDA+GF RYLAEHGNTICGRH IATFINAIEASTV ICVTWVEY QSTKVVSPQ+SSVSYASAVLTQ
Sbjct:  137 HHVHMRRCAVSTASRLETPIGDLAIDQDVTRQLLATGDFDAMTARMDEDEHSIEMHLPFIKKVMEGRPCTVVAIMIGALSAELEEHYGRILAPYLEDLTNFFIISTDFCHWGSRFRYQPLGAAHSAIHEHISWLDHEGMKLIQSQDAVGFHRYLAEHGNTICGRHPIATFINAIEASTVCICVTWVEYAQSTKVVSPQDSSVSYASAVLTQ 347
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7351.15542.1 vs.
Match: MEMO1 (family (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR11_9STRA)

HSP 1 Score: 249 bits (637), Expect = 4.070e-75
Identity = 122/207 (58.94%), Postives = 152/207 (73.43%), Query Frame = 2 
Query:  170 CAVSTASCLETPMGDLAIDQDVTSQLLATGDFDAMTARMDEDEHSIEMHLPFIKKVMEGRPCTVVAIMVGALSAQLEQHYGRILAPYLEDMTNFFIISTDFCHWGSRFRYQPLGAAHGAIHEHISWLDHEGMKLIQSQDALGFRRYLAEHGNTICGRHSIATFINAIEASTVSICVTW----VEYTQSTKVVSPQESSVSYASAVLT 778
            CA+S A+ L+TP+G LA+D+DV +QL+ TG F+AMT  +DEDEHSIEMHLP++KK M   PC+VVAIMVGA S   E  YG +LAPYL D  NFFI+S+DFCHWG+RFRYQP  AA GA+HE+I WLDH GM L+++QD  GF  YL EH NTICGRH I  F++A+ A T      W    V Y QS+   S ++SSVSYASAV++
Sbjct:  151 CAISLATHLDTPLGQLAVDKDVVAQLMRTGKFEAMTQDVDEDEHSIEMHLPYVKKRMGDAPCSVVAIMVGATSEAAEARYGALLAPYLRDPANFFIVSSDFCHWGARFRYQPHDAARGAVHEYIRWLDHAGMALLEAQDLGGFYAYLREHRNTICGRHPICAFMHAVRALTSGGSALWSVLFVRYAQSSACTSHRDSSVSYASAVVS 357
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7351.15542.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2S4_9STRA)

HSP 1 Score: 232 bits (592), Expect = 3.780e-69
Identity = 117/210 (55.71%), Postives = 151/210 (71.90%), Query Frame = 2 
Query:  149 HSYPCRRCAVSTASCLETPMGDLAIDQDVTSQLLATGDFDAMTARMDEDEHSIEMHLPFIKKVMEGRPCTVVAIMVGALSAQLEQHYGRILAPYLEDMTNFFIISTDFCHWGSRFRYQPLGAAHGAIHEHISWLDHEGMKLIQSQDALGFRRYLAEHGNTICGRHSIATFINAIEASTVSIC-VTWVEYTQSTKVVSPQESSVSYASAVL 775
            H +  R CAVSTA+  ETP+G++AID +V  QL+ TG F  M+  +DEDEHSIEMHLPF+ KVM GR    V I+VG    + +Q YG+ILAPYLED  N F+IS+DFCHWGSRFRYQP  +A+G IHE+I++LDHEGMKLI+  DA GF  YL +  NTICGRH I+  ++ I AS    C + +V+Y QS+  +   +SSVSYASA++
Sbjct:   89 HHFYLRGCAVSTAAEYETPLGNIAIDSEVNEQLINTGKFVTMSLDVDEDEHSIEMHLPFVFKVMNGRKFAAVPILVGNTKTKADQEYGKILAPYLEDEENLFVISSDFCHWGSRFRYQPHDSAYGEIHEYITYLDHEGMKLIERIDATGFAEYLEKTRNTICGRHPISLLLHTILASMKLRCSLKFVQYAQSSACMRHSDSSVSYASAIV 298
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7351.15542.1 vs.
Match: Uncharacterized (protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2JHV0_PHYPR)

HSP 1 Score: 223 bits (567), Expect = 4.850e-66
Identity = 113/213 (53.05%), Postives = 149/213 (69.95%), Query Frame = 2 
Query:  149 HSYPCRRCAVSTASCLETPMGDLAIDQDVTSQLLATGDFDAMTARMDEDEHSIEMHLPFIKKVMEGRPCTVVAIMVGALSAQLEQHYGRILAPYLEDMTNFFIISTDFCHWGSRFRYQPLGAAHGAIHEHISWLDHEGMKLIQSQDALGFRRYLAEHGNTICGRHSIATFINAIEASTVSIC-VTWVEYTQSTKVVSPQESSVSYASAVLTQE 784
            H +  R CAVSTA   ETP+G++ ID++V  +L+ +G F  M+  +DEDEHSIEMHLPFI KVM GR  T V I+VG    +L++ YG+ILAPYLE+  N F+IS+DFCHWG RFRYQP  + +G IHE+I +LDH+GM  I+  DA GF RYL E  NTICGRH I+  ++ I AS    C + +V+Y QS+  +   +SSVSYASA++  E
Sbjct:   44 HHFYLRGCAVSTAHEYETPLGNITIDREVNEKLVDSGKFATMSMDVDEDEHSIEMHLPFIYKVMNGRKFTAVPILVGNTKTKLDEEYGKILAPYLENDENLFVISSDFCHWGPRFRYQPHDSTYGEIHEYIKYLDHQGMGFIERLDAAGFTRYLDETNNTICGRHPISLLLHTILASKKLKCTLKFVKYAQSSACMRHGDSSVSYASAIVYSE 256
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7351.15542.1 vs.
Match: 50S (ribosomal protein L9 n=9 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8C3E4_PHYNI)

HSP 1 Score: 223 bits (567), Expect = 8.510e-66
Identity = 113/213 (53.05%), Postives = 149/213 (69.95%), Query Frame = 2 
Query:  149 HSYPCRRCAVSTASCLETPMGDLAIDQDVTSQLLATGDFDAMTARMDEDEHSIEMHLPFIKKVMEGRPCTVVAIMVGALSAQLEQHYGRILAPYLEDMTNFFIISTDFCHWGSRFRYQPLGAAHGAIHEHISWLDHEGMKLIQSQDALGFRRYLAEHGNTICGRHSIATFINAIEASTVSIC-VTWVEYTQSTKVVSPQESSVSYASAVLTQE 784
            H +  R CAVSTA   ETP+G++ ID++V  +L+ +G F  M+  +DEDEHSIEMHLPFI KVM GR  T V I+VG    +L++ YG+ILAPYLE+  N F+IS+DFCHWG RFRYQP  + +G IHE+I +LDH+GM  I+  DA GF RYL E  NTICGRH I+  ++ I AS    C + +V+Y QS+  +   +SSVSYASA++  E
Sbjct:   62 HHFYLRGCAVSTAHEYETPLGNITIDREVNEKLVDSGKFATMSMDVDEDEHSIEMHLPFIYKVMNGRKFTAVPILVGNTKTKLDEEYGKILAPYLENDENLFVISSDFCHWGPRFRYQPHDSTYGEIHEYIKYLDHQGMGFIERLDAAGFTRYLDETNNTICGRHPISLLLHTILASKKLKCTLKFVKYAQSSACMRHGDSSVSYASAIVYSE 274
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7351.15542.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGN5_GLOUD)

HSP 1 Score: 221 bits (564), Expect = 4.510e-65
Identity = 113/212 (53.30%), Postives = 148/212 (69.81%), Query Frame = 2 
Query:  149 HSYPCRRCAVSTASCLETPMGDLAIDQDVTSQLLATGDFDAMTARMDEDEHSIEMHLPFIKKVMEGRPCTVVAIMVGALSAQLEQHYGRILAPYLEDMTNFFIISTDFCHWGSRFRYQPLGAAHGAIHEHISWLDHEGMKLIQSQDALGFRRYLAEHGNTICGRHSIATFINAIEA-STVSICVTWVEYTQSTKVVSPQESSVSYASAVLTQ 781
            H +  R CAVSTA+  ETP+G++ ID  +  QL+ TG F  M+  +DEDEHSIEMHLPFI KVM GR  T V I+VG    +++  YG+ILAPYL +  N F+IS+DFCHWGSRFRYQP  +A+G IHE+I +LDHEGM+LI+  DA GF  YL +  NTICGRH I+  ++ I A  T+   + +V+Y QS+      +SSVSYASA++ Q
Sbjct:   83 HHFYLRGCAVSTAAEYETPLGNIEIDHAINEQLINTGKFVNMSLDVDEDEHSIEMHLPFIVKVMNGRKFTAVPILVGDTKPKMDIEYGKILAPYLANEENLFVISSDFCHWGSRFRYQPHDSAYGEIHEYIKYLDHEGMQLIEHLDAAGFSAYLEKTKNTICGRHPISLLLHTIRACDTLQCTLKFVQYAQSSACKHHGDSSVSYASAIVYQ 294
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7351.15542.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4Y3_PYTOL)

HSP 1 Score: 221 bits (562), Expect = 8.940e-65
Identity = 110/210 (52.38%), Postives = 148/210 (70.48%), Query Frame = 2 
Query:  149 HSYPCRRCAVSTASCLETPMGDLAIDQDVTSQLLATGDFDAMTARMDEDEHSIEMHLPFIKKVMEGRPCTVVAIMVGALSAQLEQHYGRILAPYLEDMTNFFIISTDFCHWGSRFRYQPLGAAHGAIHEHISWLDHEGMKLIQSQDALGFRRYLAEHGNTICGRHSIATFINAIEASTVSIC-VTWVEYTQSTKVVSPQESSVSYASAVL 775
            H +  R CAVS+A+  ETP+G++ IDQ+V  QL+ +G F  MT  +DEDEHSIEMHLPFI KVM GR  T V I+VG   ++ +  YGRILAPY+ED  N F+IS+DFCHWGSRFRYQP  + +G IHE+I +LD EGM  I+  D +GF  YL +  NTICGRH I+  ++ ++A++   C + +V+Y QS+      +SSVSYASA++
Sbjct:   83 HHFYLRGCAVSSATEYETPLGNIPIDQEVNEQLINSGKFARMTLDVDEDEHSIEMHLPFIYKVMNGRKFTAVPILVGDTKSRADAEYGRILAPYIEDEGNLFVISSDFCHWGSRFRYQPHDSTYGEIHEYIKYLDREGMTHIERLDTVGFAEYLEKTENTICGRHPISVLLHTLQAASNLKCTLKFVQYAQSSACKRHSDSSVSYASAIV 292
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BLAST of mRNA_E_fasciculatus_S2_contig7351.15542.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLT3_HETAK)

HSP 1 Score: 218 bits (554), Expect = 2.480e-63
Identity = 110/222 (49.55%), Postives = 152/222 (68.47%), Query Frame = 2 
Query:  122 AARSLIVL--MHSYPCRRCAVSTASCLETPMGDLAIDQDVTSQLLATGDFDAMTARMDEDEHSIEMHLPFIKKVM--EGRPCTVVAIMVGALSAQLEQHYGRILAPYLEDMTNFFIISTDFCHWGSRFRYQPLGAAHGAIHEHISWLDHEGMKLIQSQDALGFRRYLAEHGNTICGRHSIATFINAIEASTVSICVTWVEYTQSTKVVSPQESSVSYASAVL 775
            A +++ VL   H    +  A+S A+ LETP+GDL  ++++  +L+ +G F+AM  + DEDEHSIEMHLP++ K++  +     VV IM+GA S   E+ YGR+LAPYL+D   FFIIS+DFCHWG RFRYQP    HG IH++I WLDH+GM+LI+S D  GF  YL+++ NTICGRH I   + AI+AS     + +V Y QS+   +  +SSVSYASAV+
Sbjct:   92 AVQTIFVLGPSHHVYLQGAAISMANKLETPVGDLVPNKEIIQELMGSGLFEAMDQQTDEDEHSIEMHLPYVAKIIGEQANDVKVVCIMIGATSPNQEEQYGRLLAPYLDDPNCFFIISSDFCHWGQRFRYQPYEEDHGEIHQYIEWLDHKGMELIESLDPEGFIAYLSQYHNTICGRHPITVLLFAIKASNSQYSIEFVRYAQSSACKTRHDSSVSYASAVV 313
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7351.15542.1 vs.
Match: Protein (MEMO1 n=45 Tax=rosids TaxID=71275 RepID=A0A0B0MME0_GOSAR)

HSP 1 Score: 215 bits (548), Expect = 9.100e-63
Identity = 104/207 (50.24%), Postives = 147/207 (71.01%), Query Frame = 2 
Query:  149 HSYPCRRCAVSTASCLETPMGDLAIDQDVTSQLLATGDFDAMTARMDEDEHSIEMHLPFIKKVMEGRPCTVVAIMVGALSAQLEQHYGRILAPYLEDMTNFFIISTDFCHWGSRFRYQPLGAAHGAIHEHISWLDHEGMKLIQSQDALGFRRYLAEHGNTICGRHSIATFINAIEASTVSICVTWVEYTQSTKVVSPQESSVSYASA 769
            H Y   +CA+STA+  +TP+GDL ID +V  +L ATG F+ M  R+DE EHS+EMHLP++ KV EG P  ++ I+VGALSA+ E  YG++LA Y++D  NFF +S+DFCHWGSRF Y      +GAIH+ I  LD  GM +I++ DA  F++YL+E+ NTICGRH I+ F++ +  S+  I + ++ Y QS++  S ++SSVSYASA
Sbjct:   79 HHYYTPKCALSTATVYKTPIGDLPIDLEVIEELKATGKFELMNLRVDEAEHSMEMHLPYLSKVFEGHPVKIIPILVGALSAENEAMYGKLLAKYVDDPHNFFSVSSDFCHWGSRFNYMYYDKKYGAIHKSIEALDKMGMDIIETGDADAFKQYLSEYDNTICGRHPISVFLHMLSNSSTKIKIKFLRYEQSSQCKSTRDSSVSYASA 285
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7351.15542.1 vs.
Match: protein (MEMO1 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2Y3J4_CICAR)

HSP 1 Score: 215 bits (547), Expect = 1.490e-62
Identity = 105/207 (50.72%), Postives = 144/207 (69.57%), Query Frame = 2 
Query:  149 HSYPCRRCAVSTASCLETPMGDLAIDQDVTSQLLATGDFDAMTARMDEDEHSIEMHLPFIKKVMEGRPCTVVAIMVGALSAQLEQHYGRILAPYLEDMTNFFIISTDFCHWGSRFRYQPLGAAHGAIHEHISWLDHEGMKLIQSQDALGFRRYLAEHGNTICGRHSIATFINAIEASTVSICVTWVEYTQSTKVVSPQESSVSYASA 769
            H Y   +CA+STA+  +TP+GDL ID +V  QL ATG FD M  R+DE EHS+EMHLP++ KV EG P  +V I+VGA+SA+ E  YG ILA +++D TNFF IS+DFCHWGSRF Y      HG I++ I  LD  GM +I++ D   F++YL E+ NTICGRH I+ F++ +   ++ I + ++ Y QS++  S ++SSVSYASA
Sbjct:   80 HHYYTTKCALSTATVYKTPIGDLPIDLEVNEQLKATGKFDMMDIRVDEAEHSMEMHLPYLAKVFEGHPVKIVPILVGAISAESEAMYGEILAQFVDDPTNFFSISSDFCHWGSRFNYMHYDKKHGPIYKSIEALDKMGMDIIETGDPDSFKKYLLEYENTICGRHPISVFLHMLRNCSIKIKIKFIRYEQSSQCHSSKDSSVSYASA 286
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7351.15542.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized8.630e-13191.47protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5V7... [more]
MEMO14.070e-7558.94family (Fragment) n=1 Tax=Tribonema minus TaxID=30... [more]
Uncharacterized3.780e-6955.71protein n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more]
Uncharacterized4.850e-6653.05protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2JH... [more]
50S8.510e-6653.05ribosomal protein L9 n=9 Tax=Peronosporaceae TaxID... [more]
Uncharacterized4.510e-6553.30protein n=1 Tax=Globisporangium ultimum (strain AT... [more]
Uncharacterized8.940e-6552.38protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Hypothetical2.480e-6349.55protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Protein9.100e-6350.24MEMO1 n=45 Tax=rosids TaxID=71275 RepID=A0A0B0MME0... [more]
protein1.490e-6250.72MEMO1 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7351contigE_fasciculatus_S2_contig7351:1056..7640 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score394.0
Seed ortholog evalue4.6e-107
Seed eggNOG ortholog2880.D7G5V7
Preferred nameMEMO1
Model size1491
KEGG koko:K06990
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0008150,GO:0032879,GO:0032886,GO:0033218,GO:0040012,GO:0042277,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051270,GO:0065007,GO:2000145
Exons8
EggNOG free text desc.regulation of microtubule-based process
EggNOG OGsCOG1355@1,KOG3086@2759
Ec32 ortholog descriptionMEMO-like domain protein
Ec32 orthologEc-13_001810.1
Cds size684
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7351.15542.1prot_E_fasciculatus_S2_contig7351.15542.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7351 1754..7531 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842399.235425-UTR-E_fasciculatus_S2_contig7351:1055..17531696842399.235425-UTR-E_fasciculatus_S2_contig7351:1055..1753Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7351 1056..1753 -
1696842399.3405411-UTR-E_fasciculatus_S2_contig7351:7531..76401696842399.3405411-UTR-E_fasciculatus_S2_contig7351:7531..7640Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7351 7532..7640 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842399.2484353-CDS-E_fasciculatus_S2_contig7351:1753..18041696842399.2484353-CDS-E_fasciculatus_S2_contig7351:1753..1804Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7351 1754..1804 -
1696842399.2581139-CDS-E_fasciculatus_S2_contig7351:4564..46541696842399.2581139-CDS-E_fasciculatus_S2_contig7351:4564..4654Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7351 4565..4654 -
1696842399.2685423-CDS-E_fasciculatus_S2_contig7351:5074..51671696842399.2685423-CDS-E_fasciculatus_S2_contig7351:5074..5167Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7351 5075..5167 -
1696842399.2790377-CDS-E_fasciculatus_S2_contig7351:5757..58541696842399.2790377-CDS-E_fasciculatus_S2_contig7351:5757..5854Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7351 5758..5854 -
1696842399.289556-CDS-E_fasciculatus_S2_contig7351:6023..60711696842399.289556-CDS-E_fasciculatus_S2_contig7351:6023..6071Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7351 6024..6071 -
1696842399.2999394-CDS-E_fasciculatus_S2_contig7351:6750..68301696842399.2999394-CDS-E_fasciculatus_S2_contig7351:6750..6830Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7351 6751..6830 -
1696842399.3107054-CDS-E_fasciculatus_S2_contig7351:7161..72661696842399.3107054-CDS-E_fasciculatus_S2_contig7351:7161..7266Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7351 7162..7266 -
1696842399.3272507-CDS-E_fasciculatus_S2_contig7351:7411..75311696842399.3272507-CDS-E_fasciculatus_S2_contig7351:7411..7531Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7351 7412..7531 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7351.15542.1

>prot_E_fasciculatus_S2_contig7351.15542.1 ID=prot_E_fasciculatus_S2_contig7351.15542.1|Name=mRNA_E_fasciculatus_S2_contig7351.15542.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=228bp
MFDIAARSLIVLMHSYPCRRCAVSTASCLETPMGDLAIDQDVTSQLLATG
DFDAMTARMDEDEHSIEMHLPFIKKVMEGRPCTVVAIMVGALSAQLEQHY
GRILAPYLEDMTNFFIISTDFCHWGSRFRYQPLGAAHGAIHEHISWLDHE
GMKLIQSQDALGFRRYLAEHGNTICGRHSIATFINAIEASTVSICVTWVE
YTQSTKVVSPQESSVSYASAVLTQEQV*
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mRNA from alignment at E_fasciculatus_S2_contig7351:1056..7640-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7351.15542.1 ID=mRNA_E_fasciculatus_S2_contig7351.15542.1|Name=mRNA_E_fasciculatus_S2_contig7351.15542.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6585bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7351:1056..7640- (Ectocarpus fasciculatus EfasUO2)
TAGAAACCTTTCAAAATCTATTGTCCTTGCCAATGGATGTCGATATTTTT
CTCTCGTGGTCCATTGTAGCAACAATAGACCATTGTTCCTCTATTGTCCA
GGGTGTGTAATGTTTGACATAGCCGCACGATCCCTCATTGTGCTCATGCA
TTCCTATCCTTGCAGAAGATGCGCCGTGTCCACTGCATCTTGTCTGGAGA
CTCCAATGGGCGACCTCGCAATCGACCAGGTGCCTGAATAGCCCCGGTAA
TCACGTCCGTTGTATCTCAACCGCTCGGCCTCGCTGCTTTTGTCCGTGGA
CGAGCTTCAATCCATGACGCATCGATTTGTAAAATATCCGTCACTCAAGT
TTATGAAGTGCGTCTTCCTTTCAGGACGTGACAAGCCAGCTGCTTGCAAC
TGGCGACTTCGACGCAATGACAGCGCGCATGGACGAGGACGAACACTCTA
TCGAGATGCACTTACCCTTCATCAAAAAGGTATTTCTTGTCGCAAAGAAA
CCCATTGCAACAATACGATTGTTTAGTGCGTATGCAATCCTTGATTAGAC
AACTCTGTACCGAACGGGCGGGAGCGGGGTGGAAAGGTAAGTGAGCTGTA
TATTTGGGTCGGCAGCACAGTAGTTGGGCGATTGGAAACCGAACTCGATG
TTAAACGAGTTTCTTCGCTGTTTAACGTTGTGCCCAAAGGCTCTTGAATT
GAGGGCCCCTTCGTACTCCCTCTTTTCTGTTGGCGCAAGATACTAAGTTA
TGGTTGACTACGCGTACATGTGGTTGGAGTGCTCTCAACTTGCGCGCGTG
TTACCTCTAGGTGATGGAAGGCCGACCATGCACTGTTGTTGCCATTATGG
TCGGAGCACTTTCAGCACAGCTGGAGCAACACTATGGCAGGTACATGTCT
TTTTTTTGGATGCGCTTTTCCAGAGCGGGTATGGATGCTTCTGGGTTTGT
GCCTCTTGGGGAGAACTGCATGGGATTGAGGGTAAGACAGGTGGGCATGC
ATTTGGCGCTTCTCGTCCCTCTTCAAGCAGCTTAAGACCACTCTCCCACC
TTGAACCACACCAACGTGAAATTAAGTTTAATGACTATGTGGATAATTTT
GTGTTCTGCCCGATGCGAAAAATGAAATGGAAATCTTAAAGCATCATTGC
ATTAGGGAGAGCGACTTGTGGCGTGAACAACGTTCGAGCACCATGCCTGA
AACAACATTGTCGTAGTTTCAGCGGTATCATGTCTGCTGTGAGTTTTGTT
TCGCGCCGCATATGGGTGGCTGATAACGATGGACGGAATCGTTCTCATCA
GCACGGGCTGATGACGTCCGCACTGAGACGATGAACTGGCACAGGCATGC
TCCTACCTTGGTTTGTAACTGATGCACATTCGGGTGTGAGGCATATGCAC
GGCGCTGGCAGCCTCTCTTCGATTTGTGCCCTGCGTTGCAACGTTTCTAC
AACCCATGCTGGTGTATGCCCCAATCATGTGTGTCGCACGTTCTGTGCTT
TGGGGCCGAATCCAACCTGTTTTGTTAGCGTGCCCACAATCGTGGTTTTC
TCTCGACGTACTCTGGCAGGATCCTGGCGCCGTACTTGGAGGATATGACA
AATTTCTTTATCATCAGGTACGCGTTTAAAATATTAATTGTGTGGCCCAG
ATAGCCGCAATGTTGTTGTTGCCGTGGACATCGTGTTTTGACGGTTCGAT
GTTGTTTCCGTGGACATCGTGTTTTGACGGTTCGATGTTGCGACATGAAT
TTAATTGGATTCTTGTTTGCCGCGTTTTTGTTGCAGCACTGACTTTTGTC
ACTGGGGCTCGCGCTTTCGTTACCAGCCCCTGGGTGCTGCACACGGCGCT
ATCCACGAACATATCAGCTGGCTCGACCATGAGGTATGCCGAACTCGCTG
ATGAAGAACTCCTCATGTCTACTGGTTCAAGGGGAAAACACGTGTTGTTC
GGCATGTATAGACACACCTTGCACAATTTTTTCGACATGAGTTCTTCGCC
GACCTTGAGAATAGCTGGCGTCAGTTGTCTCCCGACATCCCCATCCCGAC
CCGTTCGAGAACTATATACTTCGATTCCCTTGTCTTGGTTTCGATGCAGT
GCGACCCAAAATATCAGGGTACTCTATATTTGCTTGGTGTGACGGTTTTG
TCTGCTTAGGGTGGTGACGACTTTGGCGTAAACGGTCCGACACACCGTGA
CCAATGTTTAATATTACGCAAGTGTGTAGAAAGGTGTTTTTTATACCGAA
TACTTTGTGGGATTTCGGCGGTGAAACATCTGAGTTAATGGACGTAAAAC
CTGTTCACGGCGGTAAACCGCGGAACTACTGTTTCCCGCCGTCACCATTT
CTTTGTGGCTTTATCATCCCAGAGGTCGTCATCGCAGTTCCGTCTAATCC
TTCGTTGTAGCTGGTTGCGTATAAGAAACTGTCGTAACGTGTTCTGTAAC
TGCCCTTCTTGGCGACGCGATAGGGCATGAAGCTAATTCAATCTCAGGAC
GCGTTGGGATTTCGCCGATATCTTGCAGAACATGGAAACACGATTTGTGG
AAGGCATTCCATTGCGGTGAGTGTCATCGGTCAACTGCCGCTGTGAAGGA
TAAAAGGGGGTTGGATCCTATATGTGTACCGTGCAGAGATTTAGGCACTC
GCTATCGTTGGCGAGTGGTGTACCGCCGATGAACGTGCGTAAATGTACAC
AGGACGGGCTCGTCCTGACGGTTTCCCGAGGACGACAAGCTGTGTGGAAC
GGGGATGAGCACACGTTCGGCCAGAATCGGGAAATTGTTGCGGTTACCGA
GATTGTGTATTCAACTTTATTTCTGGCGTGAAAAAGGTACCTGTACGTTC
ACACCCGCGTTGGTCTTCGAACGAGGCTGTCTAAACTCTTGTTTTTCGAA
GCGGCAGCTGATTGACTTTAATCTTGTTGGTGTTTTCGTATGTCACACTT
ATGTTCGTCTGACGAACGGCGACCACCTGATTTCAGACCTTCATCAATGC
CATCGAGGCCTCGACGGTCAGCATTTGCGTGACATGGGTCGAATACACAC
AGAGCACCAAGGTGGTGTCACCCCAGGTGAGAAGTCTTGCTGTTGCGTCG
GCGCTGCAGGCCCTATTTTCCTCTCTGATTTCCTGGTAGGTACATCATTC
AGCCGTTTCTAAGGCCCCGGCAATTAATTGCTAGGACGAGTTCCTGTCCC
CCCTCTTTCCGCTAAAAGCCCTAGGAGATCAAGGAGAACACAAACCTCTA
CACACTTTTTTGGAGGAACTATTCCAGCTTGAGCCACCTCGTCGATTTAA
ACTGTGCCCCTATAAGTTTAGGCCTTGTATCGTGAGGTCGAGGTGCTTGA
AATTTTGCGATATGAGCTAAATCTTCCCGCAGAGAGTACTGTTGAAAAAA
CGCAGAAAAATGTGCTGCAGCTGCCGACAGCTACAGCACGCCATGCGCAA
CCACACTGCTGGAAAGGACAGAGCCTACCGATTTTAGTGTGTAAGCGGCG
TCGCTGCATTGACAGCAGCAGCAGCAGGCAACCACAAACGATTCTGCAAA
GTTCTTGTCACGTGTATATTTTCCTCCCATTATTGGACTCTGTCGTCTGG
CCCTCTGGCCCCCTTCCTCCACTTCTACTAGCTAGACGACCCAACCGGGG
TCACGCAGGAGGGGGGGGTTGGACCCCCTCCTGCGGTTCCTGCCTGAGAT
ATTTTTATCGCGATAAGGGTACAGCACTCCCCCCCCTCGTCAACAATCAA
GCCGAAGTATATTTACTAACGAGGTTATCGCTTTCAATTTTGCCAGGAAC
GAAAGTGACAAGAAAATCACTTCGCAGGGACTCGAACCCATGACCTGGTG
CATTAGAAGGTTGCGTGGATACCAACAAGACCAGTGTATGTAGATGCATG
GAGCAGCTCAACATTTGACAAACTGCTGCATGTTTCTAGGGACTTTGACG
CGCGCCGCCGGTCTCCACGTGTGTATGCCCAATCGACAAACGGATTGAAC
GCGAATCAAGCTGCGATCACAGGTGTTCTCCTACAAGAACGTGCAGAGGT
TTTGGATTTGCACAGTTGATAATTTTGATCTACGGCCCACAAATGAAAAT
ACGCTTTTTCGGTCGATTTTCACGTTCCCTCCGTACATATCACGCTGCTT
GTGCGCAAATCCCTACACTTGCTCTCGGGTTGTTTCGTATGTTCGCGAAA
CGCCATTCCCTTATACAACGCTTTTTTTTTTGTCCTGAAGAACCTGGCGT
ATCCTTGAAGGTGTCGATTATTGGACGGCATTTTTTTTCTTCCGCTTGAT
ATAAGCGTTTATTCGGTAAAGCGGTGGTGGGCGGTACCGGTGACCGGCCG
TATTACCGATGTTATTTTCGTTATTTTCTTTATTTTTTCCTTTTCTTTTC
GTCTTTCTTTTTCCAAGTCTAAGGCGAGCCGAATCCTAGACTGTTTGTCG
GTGGCTCCTATTGGCCTGCGGACCCTTCGGGTCCATTTTTATTTTGTATT
TTTTCAGATGAGTTAGCCTTGTGACCACGGGAATCGACCGCGTCAAGTGT
TGGATCAGTACGGACATATGAAGGTGCTAACTAGAGAACGATCGGAACGG
TTTTAATGTGAAGACAACAACAGCAACAACAACAACCGCCAAAGTCGTTA
CCGCCACAACACGCATTACCACCTACCGCGAAACGAGTGTATCATAAAAC
CGCCGACAAATTACTGCCATTTTTGGGGTTCACCGCCTCTACCAAAGTTG
TTACCGCCCGAAAAAGGATTACCGCCTACCGCCAAACATTTGCCGCCATG
CAACATAACCGCCGAAATGTGTCCGCCTAGAAAACCGTTACAGGTAAAAA
CCCTTGGGATTTTTTTTCGGGGATCCCTCCATGCTGGATGAAGCAAAAAC
AGTACTCCGTATCAAAGCTATCCCCCATATAGCCGTCATAGGTATCTTGT
GGGGTGGTTGTTAGAGACCGCGAGGCGCTGGAAGGCTGGCATTGGTGGGT
TGACGAGGGCCGACAGCTTTTCTTTAGGGCCGATCAAACACACAGCTGTT
TTGCTTCCTAATCTCCAAATTGCCAAATTTCGACTTGGCAGATTTCCAGT
TTTGGAAGCAACTCGTCCCCTCGTTCCAATTTTTTCGGTGAAGTAGTTTC
CATAATTCCAAATTTCGAATATATCCAAAAACAATTCTTTGGCCCCAAAT
CAAGGTTCTATATTCTAAGTCTACGGAGTTAGAATTTTGGAATTTTAGAA
GCGAATAGCTGTTTAAAATGCCCCTAAAGGCCTCTACGGCCACTTGCAAG
GGGACTCCTGAGGTGCGGCGCACACGAAGGACGCACGGAAACACCCTAAA
TCTCAATACGTTGTAGTGCCAAATCGAGGGGGGATTTTGTGGTTCTTACA
GTACCACCTACCATGTGCTTTGTTGAAGTTTAGGATTTAGATGGATATTT
TGTAGCTACGGACAGGACTAGATGTGAAGGTGCCGCCCCCGCCTGTGCCT
GGAGCAACTCATGTCTAATTCCTCGGTCCGGGTCGTACTCGTTAGATCAT
ACCCAAAATAGATGCGCCTCTAAGTCGTCGCCACCACACGCACTTGATAT
CGGACATCTCCCCACATCGTGGTTGGTGCCTCTCGTGTGGCCGCCGTTAG
AGGTCGTGGGGACAAATTTCTCTCGCGATTCAGTTTGCAAATCACGCTCT
CATTGCGTTGAGTTTGGTCGCCATCCAAGCGGACGTCTAGTCAGAAATCA
GATCTCGATAAAACCACACTTGCAAGAATCATTTCATTGCCTTCCACAAC
GATGATTCTTGCACCTTCATAAACCCTGCGTTTTAGGAATCTTCGGTGAG
CTACGCTTCGGCCGTCCTCACGCAAGAACAAGTGTGATGAGGAAGGAGTA
ACTCTCAGGGCACTTCGGACTCCCGCCACGACGAGGGGGCTTCCACCGTG
TACTTGGCGCGGTTGTATCGGATGTAGGCGTGTATTTGAGCAGTTGCTTG
GTCAAGTCATGTACTCGCGTCTTTTTTATATGCTGTTTGTTGTTTTCGGG
CCAGGAGTTTGATTTCATACATGTACTGAGCAATTCAGTCTTGCAAAAAC
AATGAGGCGGCAGCCGTCGCTCAGTCCCCGCGAACACGTTGCCAGTCGTT
CGAGTCGCATGTGGTTTGTACATTGAAGGGCAGTTTGTGTGTGCTGCTGT
TGCTGCCTGACATGGAACGTCCATTAAGTGTGCTGGGAAATGGACAGGAG
GAGGCAGGCGGTACACCGGAGGCTACGAAGATAGTGCAAGTTACCCCCCA
GATATTCTTTAGAGCAGTTACTCGAATGCGGGTTTCGTGAGTGAGCGAAA
CAGGGGACGTGATTCATTTCCTCAAGGAAGGGGAGGGGACGGGGACGAGG
ATGAAAACCCCAAAAATCCTGGCCGGGTGGTTAGATACGTTGGGACCGAT
GAGGTAGATACAATACCACCGGTCGCCCCGGTGGGTCTAGTGTCTATTGC
GTACCTTCGCAGCCCACTAAGGGCCAGGTCATAGTGAGCTTTTTCTCACT
AAATATATCCTGGTCTAAGTCGGAAGCGACGCGCT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7351:1056..7640-

>mRNA_E_fasciculatus_S2_contig7351.15542.1 ID=mRNA_E_fasciculatus_S2_contig7351.15542.1|Name=mRNA_E_fasciculatus_S2_contig7351.15542.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=684bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7351:1056..7640- (Ectocarpus fasciculatus EfasUO2)
ATGTTTGACATAGCCGCACGATCCCTCATTGTGCTCATGCATTCCTATCC
TTGCAGAAGATGCGCCGTGTCCACTGCATCTTGTCTGGAGACTCCAATGG
GCGACCTCGCAATCGACCAGGACGTGACAAGCCAGCTGCTTGCAACTGGC
GACTTCGACGCAATGACAGCGCGCATGGACGAGGACGAACACTCTATCGA
GATGCACTTACCCTTCATCAAAAAGGTGATGGAAGGCCGACCATGCACTG
TTGTTGCCATTATGGTCGGAGCACTTTCAGCACAGCTGGAGCAACACTAT
GGCAGGATCCTGGCGCCGTACTTGGAGGATATGACAAATTTCTTTATCAT
CAGCACTGACTTTTGTCACTGGGGCTCGCGCTTTCGTTACCAGCCCCTGG
GTGCTGCACACGGCGCTATCCACGAACATATCAGCTGGCTCGACCATGAG
GGCATGAAGCTAATTCAATCTCAGGACGCGTTGGGATTTCGCCGATATCT
TGCAGAACATGGAAACACGATTTGTGGAAGGCATTCCATTGCGACCTTCA
TCAATGCCATCGAGGCCTCGACGGTCAGCATTTGCGTGACATGGGTCGAA
TACACACAGAGCACCAAGGTGGTGTCACCCCAGGAATCTTCGGTGAGCTA
CGCTTCGGCCGTCCTCACGCAAGAACAAGTGTGA
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