mRNA_E_fasciculatus_S2_contig734.15529.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig734.15529.1
Unique NamemRNA_E_fasciculatus_S2_contig734.15529.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig734.15529.1 vs.
Match: N/a (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZV9_ECTSI)

HSP 1 Score: 499 bits (1286), Expect = 5.200e-171
Identity = 267/287 (93.03%), Postives = 276/287 (96.17%), Query Frame = 1 
Query:    1 MGTEKKEDFRDLVAPASNNEELGQKHCSRPRNDRGNAGVGRPLQARKQRRGNRQGKGTGPVKIWCCPSTSALREEACANLNAMTRPGLWREKAHRSEKVDAGYRQLERLRESYKSDRQRGVAGGKRRFLSLLREEMSEDQRERWMKRRALMRADRFTVGQRRELREWFDCLDKDGSGEIDSSELSHPLLCTGLARSALEVGRLVRQVDXXXXXXIGFHEFLAILQPKGATAGKSAIDKITHLQDVKKAHGSDMQTVVAIERRSLLMKEILDEAAFRSSVLEDVEEKR 861
            MG + +E +R LVAP SNNE LG++HCSRPRNDRGN GVGRP QARKQRRGNRQGKGTGPVKIWCCPSTSALREEACANLNAMTRP LWRE+A RSEK+DAGYRQLERLRESYKSDR+RGVAGGKRRFLSLLREEMSEDQRERWMKRRALMRADRFTVGQRRELREWFDCLDKDGSGEIDSSELSHPLLCTGLARSALEVGRLVRQVDXXXXXXIGFHEFLAILQPKGATAGKSAIDKITHLQDVKKAHGSDMQTVVAIERRSLLMKEILDEAAFRSS L+DVEEKR
Sbjct:    1 MGPKTREGYRGLVAPTSNNEGLGEEHCSRPRNDRGN-GVGRPPQARKQRRGNRQGKGTGPVKIWCCPSTSALREEACANLNAMTRPRLWREQAQRSEKLDAGYRQLERLRESYKSDRERGVAGGKRRFLSLLREEMSEDQRERWMKRRALMRADRFTVGQRRELREWFDCLDKDGSGEIDSSELSHPLLCTGLARSALEVGRLVRQVDXXXXXXIGFHEFLAILQPKGATAGKSAIDKITHLQDVKKAHGSDMQTVVAIERRSLLMKEILDEAAFRSSALDDVEEKR 286
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig734.15529.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZV8_ECTSI)

HSP 1 Score: 367 bits (942), Expect = 3.170e-119
Identity = 211/288 (73.26%), Postives = 229/288 (79.51%), Query Frame = 1 
Query:  850 EEKREIAQSNGDHRALKELKEREAKLERRRVENNLFIQAVSDATDFEQERERLDNNVLHKARSRRELLKTSFTKGSSFVLPSQSKSSFSHTNAGEACTPLPAFSSTRCPEPRQAGCGAGSSGAGENGG---VETCKGGESCASNSAIVYNSSDRDFRNLLAQEHRLLQXXXXXXXFKKSASSRNLAGTDGVAARQTFLAHKRR*NLAGEVAAS*RAAKAAQTKRLLAVDRTAIHLVRNGWAVLVLTAPVSGTVGNGLAKHFVAVKGNTLHRAKMENIPPTRVRRR*QR 1704
            E++R IAQSNGDHRALKELKE EAKLERRRVENNLFIQAVSDATDF+QERERLDNNVLHKARSRRELL+TSF KG+SFVLPSQSKS+F HTN GEACTPLP   S RCPEPR+AGCGAG       G    VE+CKGGESCA+NSA+VYNS DR+ R L+AQEH LLQ       FKKSAS+RNLAGTDG+A RQ F A KRR  LAGEVA   +AAKAA+T RLLA DRTAIHL  N  AVLVLTA  SGT G G  +  VAVKGNTL RA+ E IP TRVRRR QR
Sbjct:   11 EQERAIAQSNGDHRALKELKELEAKLERRRVENNLFIQAVSDATDFQQERERLDNNVLHKARSRRELLQTSFAKGTSFVLPSQSKSNFPHTNTGEACTPLPGIPSARCPEPRRAGCGAGXXXXXXXGRAHFVESCKGGESCATNSAVVYNSGDRESRTLVAQEHHLLQRRLHHHNFKKSASARNLAGTDGMAGRQPFPARKRRWVLAGEVAVPQQAAKAARTTRLLASDRTAIHLALNCRAVLVLTATTSGTAGKGRTRRLVAVKGNTLLRAEKEFIPSTRVRRRYQR 298
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig734.15529.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L334_9PHAE)

HSP 1 Score: 271 bits (692), Expect = 1.020e-79
Identity = 157/210 (74.76%), Postives = 168/210 (80.00%), Query Frame = 1 
Query:  796 MKEILDEAAFRSSVLEDVEEKREIAQSNGDHRALKELKEREAKLERRRVENNLFIQAVSDATDFEQERERLDNNVLHKARSRRELLKTSFTKGSSFVLPSQSKSSFSHTNAGEACTPLPAFSSTRCPEPRQAGCGAGSSGAGENGGV---ETCKGGESCASNSAIVYNSSDRDFRNLLAQEHRLLQXXXXXXXFKKSASSRNLAGTDGVA 1416
            MKEILDEAAFRSS L+DVEEKREIAQ NGDHRALK+LKE EAKLERRRVENNLFIQAVSDATDFEQERERLDNNVLHKARSRRELL+TS  KG+SFVLPSQSKS+   TNA EACTPLP F S R PEPR+AG GA        G V   E+CK GESCASNSAIVYN  DR+ R L+AQEH L Q       FKKSAS+R LA TDG+A
Sbjct:    1 MKEILDEAAFRSSALDDVEEKREIAQLNGDHRALKQLKELEAKLERRRVENNLFIQAVSDATDFEQERERLDNNVLHKARSRRELLQTSLAKGTSFVLPSQSKSNCPQTNAAEACTPLPGFPSARYPEPRRAGGGAXXXXXXXXGRVRFVESCKDGESCASNSAIVYNKGDRESRTLVAQEHHLRQRRLHHQNFKKSASARKLAETDGMA 210
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig734.15529.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9M3_HETAK)

HSP 1 Score: 80.9 bits (198), Expect = 1.580e-13
Identity = 48/94 (51.06%), Postives = 62/94 (65.96%), Query Frame = 1 
Query:  403 EMSEDQRERWMKRRALMRADRFTVGQRRELREWFDCLDKDGSGEIDSSELSHPLLCTGLARSALEVGRLVRQVDXXXXXXIGFHEFLAILQPKG 684
            E+SE + E+W+    +    +F+  QRREL+ WFD +DKDGSGEI   EL+ PLL TG+ARS  EV  +     XXXXXX  F EFL +L+PKG
Sbjct:  127 ELSEQEVEKWLSHHKMNTQFKFSFAQRRELKRWFDSMDKDGSGEIGVMELAVPLLSTGIARSMQEVKNIXXXXXXXXXXXXXFDEFLEVLRPKG 220
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig734.15529.1 vs.
Match: Glycerol (uptake protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GHW7_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 4.890e-7
Identity = 36/104 (34.62%), Postives = 59/104 (56.73%), Query Frame = 1 
Query:  487 ELREWFDCLDKDGSGEIDSSELSHPLLCTGLARSALEVGRLVRQVDXXXXXXIGFHEFLAILQPKGATAGKSAIDKITHLQDVKKAHGSDMQTVVAIERRSLLM 798
            +LR+WF+ LD+D SGEI ++EL  PLL  GL RS  +V RLV ++D      IGF EF+ I+  +      SA   +   + V +A  ++ +    + +++L +
Sbjct:    2 DLRQWFNVLDEDKSGEISTNELVDPLLTVGLCRSRQQVERLVSKIDVDGSGAIGFDEFVNIVCSEEGEDPNSANALVQLYRAVARALSANREFAERVGKQNLAL 105
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig734.15529.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
N/a5.200e-17193.03n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Uncharacterized3.170e-11973.26protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.020e-7974.76protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Hypothetical1.580e-1351.06protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Glycerol4.890e-734.62uptake protein 1 n=1 Tax=Hondaea fermentalgiana Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig734contigE_fasciculatus_S2_contig734:18645..24396 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score507.3
Seed ortholog evalue7.9e-141
Seed eggNOG ortholog2880.D7FZV9
Model size2058
KEGG koko:K10840,ko:K16465
KEGG Pathwayko03420,map03420
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.Ca2 -binding protein (EF-Hand superfamily
EggNOG OGsCOG5126@1,KOG0028@2759
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-22_003900.1
Cds size1452
COG Functional cat.DTZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig734.15529.1prot_E_fasciculatus_S2_contig734.15529.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig734 18645..23790 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842397.910991-CDS-E_fasciculatus_S2_contig734:18644..189981696842397.910991-CDS-E_fasciculatus_S2_contig734:18644..18998Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig734 18645..18998 +
1696842397.9277055-CDS-E_fasciculatus_S2_contig734:19590..197361696842397.9277055-CDS-E_fasciculatus_S2_contig734:19590..19736Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig734 19591..19736 +
1696842397.9410622-CDS-E_fasciculatus_S2_contig734:20283..203921696842397.9410622-CDS-E_fasciculatus_S2_contig734:20283..20392Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig734 20284..20392 +
1696842397.9583578-CDS-E_fasciculatus_S2_contig734:21007..211391696842397.9583578-CDS-E_fasciculatus_S2_contig734:21007..21139Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig734 21008..21139 +
1696842397.9693449-CDS-E_fasciculatus_S2_contig734:21880..219991696842397.9693449-CDS-E_fasciculatus_S2_contig734:21880..21999Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig734 21881..21999 +
1696842397.981109-CDS-E_fasciculatus_S2_contig734:22828..229611696842397.981109-CDS-E_fasciculatus_S2_contig734:22828..22961Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig734 22829..22961 +
1696842397.9953868-CDS-E_fasciculatus_S2_contig734:23165..235911696842397.9953868-CDS-E_fasciculatus_S2_contig734:23165..23591Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig734 23166..23591 +
1696842398.00636-CDS-E_fasciculatus_S2_contig734:23757..237901696842398.00636-CDS-E_fasciculatus_S2_contig734:23757..23790Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig734 23758..23790 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842398.0170584-UTR-E_fasciculatus_S2_contig734:23790..243961696842398.0170584-UTR-E_fasciculatus_S2_contig734:23790..24396Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig734 23791..24396 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig734.15529.1

>prot_E_fasciculatus_S2_contig734.15529.1 ID=prot_E_fasciculatus_S2_contig734.15529.1|Name=mRNA_E_fasciculatus_S2_contig734.15529.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=484bp
MGTEKKEDFRDLVAPASNNEELGQKHCSRPRNDRGNAGVGRPLQARKQRR
GNRQGKGTGPVKIWCCPSTSALREEACANLNAMTRPGLWREKAHRSEKVD
AGYRQLERLRESYKSDRQRGVAGGKRRFLSLLREEMSEDQRERWMKRRAL
MRADRFTVGQRRELREWFDCLDKDGSGEIDSSELSHPLLCTGLARSALEV
GRLVRQVDKDGSGEIGFHEFLAILQPKGATAGKSAIDKITHLQDVKKAHG
SDMQTVVAIERRSLLMKEILDEAAFRSSVLEDVEEKREIAQSNGDHRALK
ELKEREAKLERRRVENNLFIQAVSDATDFEQERERLDNNVLHKARSRREL
LKTSFTKGSSFVLPSQSKSSFSHTNAGEACTPLPAFSSTRCPEPRQAGCG
AGSSGAGENGGVETCKGGESCASNSAIVYNSSDRDFRNLLAQEHRLLQRR
HHHHNFKKSASSRNLAGTDGVAARQTFLAHKRR*
back to top

mRNA from alignment at E_fasciculatus_S2_contig734:18645..24396+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig734.15529.1 ID=mRNA_E_fasciculatus_S2_contig734.15529.1|Name=mRNA_E_fasciculatus_S2_contig734.15529.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5752bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig734:18645..24396+ (Ectocarpus fasciculatus EfasUO2)
ATGGGAACGGAAAAGAAGGAAGATTTCCGTGACTTGGTTGCTCCAGCCTC
CAACAACGAGGAGTTGGGTCAAAAACATTGCTCCCGCCCACGCAATGATC
GAGGCAACGCCGGCGTGGGTCGACCGCTACAAGCACGGAAACAGCGTCGA
GGAAACCGCCAGGGAAAAGGCACGGGCCCTGTCAAGATCTGGTGCTGCCC
GAGCACGTCGGCGCTGCGCGAGGAGGCGTGTGCTAACCTAAATGCGATGA
CCAGACCGGGGCTGTGGCGGGAAAAAGCTCACCGGTCAGAGAAGGTGGAC
GCCGGCTATCGTCAACTCGAGAGACTCAGAGAAAGTTACAAGTCAGACCG
ACAGGTTGGTGCGGCGGAACGATATGAGGCAGGGGTCTTCGCTCATTCGT
TTTGTTGGCCAGGGATATAACATGAACCACACAGCCTGCACAAGATAACA
GCATGGGCCCGTAGAAAAGAAATGATATTACGGCCGAAACTCGAATCTTG
TGTTCCGGGAAGAAACACCAGTAATGGGAGGGGGTGCCGCAACAACCACC
TACCCCTCCCCCAGATGAGCAATTCGATGTCCATATGGGGATGAATGTAG
TCATTCGGGTTTGTGCTACTTGTTTCAGGCGCGCCCCAAGCTACATCTTG
CATCTTGCGAGTTGGGGGGGCATCCGTCGCCCCTGTTTATTTGCGAGATG
TTTCTTGCTTCTCAACCAACTAAGCCCCCCCCGCTCTCCCTCCACAAACA
CAAAGGTTGAGGCCTCGGCAAGCAGAGTTGAAGATTTCCTCGGACGCAGA
AAACGACCCGAATGCGTCAGAGTCAAGGGTATATCCCGTGCGATATGCAT
ATCGAACACAAAAATAACTCGGGTAGTTAATGCTTGTTGCGCTACTACTT
GATCAACACGGAAACTGTAATATTTTGCTTGTGCCACCAATGGAAGCGGG
GAGTGGCCGGCGGCAAGCGCCGCTTCTTGTCCTTGCTGCGAGAAGAGATG
AGCGAGGACCAGAGGGAACGGTGGATGAAACGCAGAGCGTTAATGAGGGC
TGACCGCTTTACGGTGGGGCAGAGGAGAGAACTGCGGGAATGGTGAGAAA
GGCTTGGTTTGCATGCTCTCTGTCGGAGTGTGGTTCAACAGCAGCGTGCG
TGATTCCCGATTGAACGTGTTCATGATTCACCTGCGCTCAAACTAGTGGC
CTAGTGCGAGTGGAGCTCGGGTGTGGCAATGTCATTGTAGCTGCGACAGA
CACACACATCTGATAATAGGCACAAAGTGTACTGTAGCGGAGGTTGCTGA
CTCCAAGCGCGTCCGTCAGACAGCGCCGGGCTTTGAGGGAAAGTAGGGGC
TTGGTATTGACAACATGAAAGAACGATTTTGGCGCTATGCTATTCTCTAT
CGGTTGTATCCAAACTCCCACAAGTCACGGCTTGCTGGTAGTATCGTCCA
GCATTCCAAGACGGGGGTAAGACATTCGTCATTGTTTACACCATATACCA
ACACCTACCCAGACAAAAACGTTTCAGGGATGCGATGACGAGAGTCCAAG
GAAACGCGCATCGGGCTGGGTATAGGTTTGCAATCTCTCTACGGCACTTA
ACCGTACTTCCTTTACTGAGCAGTTCGCGCTCGTTGCAGGTTTGACTGCC
TGGACAAGGACGGGTCCGGAGAGATAGATTCCTCGGAATTGTCGCACCCG
TTGCTGTGTACCGGCCTTGCGCGGAGCGCCCTTGAAGTAGGTCGCCTGGT
GAGAGCTTTTCGTTTGATGGACTCAGCCTCCTCGGCCACGCAGTCAGCTG
ACTGGGTGGTCACGTAGACTAGGCCTTCATATGAACCAGACTAACACACA
CCAATAGAGAGATGTGTATCACCTTTATTATTATTTGCCGTTGCTCACAA
GTAATCGATACCATTCCTAAGCAACACTTCCTAATGTTGCTGGCTATGGT
GGGACTCGTTTCACAGCAGTAGGTGCCCCCCTTCGGCCGCATCGCCGTAT
GTAAAGCATCGGAGATATCCATGGGTTGTCGTGCGTCTTCTCGAGCAGAC
ACCACCTAGCTGTTTAGAATGACCACAGCATACCACTGCGCAGGATGAAA
AATTCGCTCCGCATTCAAGCAGGGCTTTCGTGAGACGCAATGTTTGTGCA
ATTGTCGCAGTTCGAGCCATACTCTCGTCACCTGTAATGTTGCATCCTGT
GCCTGCCATCCACTCTCTACGGAAGGGAGAGCTCTCTGAAAGGAAGTGCT
CACGAACAAAAGACGCTGCTCGTTACAACTGGTTGTCTTTTTGAACTGTA
TCGTTTCCCTGTTTCAACCGAATGGTTTGACACGACCCCGCTTTTGTCCC
CCGTTCCGACCAGGTGCGGCAAGTGGACAAGGACGGATCGGGGGAGATAG
GGTTTCACGAGTTCCTGGCGATTCTCCAGCCCAAGGGGGCAACCGCCGGA
AAGAGCGCCATCGATAAGATAACTCATCTCCAAGATGTCAAAAAGGTAGG
CAGAGAGGAGGGTGCCCGCCGCCCGCACGCCCGATCGACGTGCTGGAGCC
ATGCATCCTGTGTGATGTCGCGTACATGCTAGAGCGGATTCGAGTTCTAG
AAGTAGGAGCGGGCAGATGGATGGGGTACATCGTTGCACGCTACCTTTTC
TCATGCTGCGTATTCCCTAAATCACAACTGAAGGAGAGTTGAAAGGGAAT
ATGATCTGCTGTCTTGAGATAGTTTTTCATCTGGCGGTAGGTGCTTGCTC
CTGAATATTTGTACAACCACGGTAGTGCTCGAGTACTAGGCGTGGCGCAC
AGCAACCTGCTTCAAACTGGTAGCCAAGGTCTTGAAGCGGCGGCCGGCAC
CACTTCAGGGTATGTGCTGGAAGACAACAAACGTTCAGCTACCTGGCAAT
GCCTCGAAATTAGCGATTCCCTCGCGGGGTGTGGCGCAAGACAGACAGGG
CGCCGGCGCTACGACGGCCCCACAAGGCAGTAAATGAGGCAAACACAATC
ACTCTTTTTATTGGCACGCTTGCGTCACAGCATTGTATCTTCCATCTGGT
CCGGTAGCAACTCATGTTCGATGTAGCAGTATTATCCTAGACAGTTGGCG
TAAAATGTTTCCGCACCAACACTGTGTCTCCGGGCGACTCCGTTTCTACC
AGCGTCTAGCATTGGCTGTTTCCGCGAACCCTTCCTCTCTTGCCCTCGCT
CGACGGCCGATCAACAAACACTACCCATGTTCAAAGGCGCATGGCAGTGA
TATGCAGACCGTGGTGGCGATAGAGCGGAGGTCTTTGCTCATGAAGGAGA
TCCTCGACGAAGCCGCGTTCAGGAGCTCTGTGCTGGAGGATGTCGAGGAG
AAGAGGTGCGGTCGGTTTCAACGAGAAAGGGGCCCTTGTGTGCAAGGAAA
CTAGGCGTTTGTCGTGAGAGCGTGTGCGCCGACCCACATTAGCAGTGCGC
ATGCTACCCTTACGGGGAAGCTAAATAACACTCGCGCGAGGGTTTGCGGG
TTAAGAACGGTCATGTGGTTTTCCTCGAGAATTTTCAGTTTTCAACATAA
ACAGGTAGTTGGCGAAACGCCTATCAGAAACAACGGGTGTCAAGAAAGAA
GAACAACAGTAGCCACGCCGAGGTAAAACTGTCTGGGGTTTCGAAGGGCA
CTTTTTCTCTTTTTTGTGAGAATGTTTTGCGCACAGTAAGTCTTTTGACA
GACATCGAGAGTTCATATTCGAATCGGCATACCCTTTCGACACCAAGTAT
GCATTTTCCCACGTCCATTCAATCGCTTGAACTCAGTCGAGTACGTGATG
CACTTGTTTACATGTTTAGTTCTCTTCGTAACGTTTGTCAAGGCCGGTGC
GGTGTGTATGCTATCTCGCAGGAAACAGTTTCCCTGCGTTTTATGCCAAG
AAGTGCTCGACATTTCCCCTTCATGTATACTCATGCTGAACACGACTTAC
TGTAGGTCCTCGTACGAATAATGTCGTTACTTTTGTGTGTTGAGGGATAT
TGAAAGGTGTTTCTCTGTCTTCTGAAAGGCAAAGCGAAGGGTTGAAGGAA
GAATGTCATCGCCTCTGACCACAAATCCGTTGGCTCAGGCTGGTTTGTGA
TGGCAACAGGAGCAAGGAAGGTATGCATATGAACAAGGATAACAATCACC
ATGGCACACCTGATGTTGTCGCTGCGCTATCCAGGGAAATAGCCCAATCG
AACGGCGACCATCGGGCTTTGAAAGAGCTGAAAGAACGGGAAGCGAAGCT
GGAACGTCGCAGAGTGGAGAATAACCTCTTCATTCAGGCGGTCAGCGACG
CCACAGACTTCGAACAGGTCTGCATGTAGACTGGATGACGAGTGCGTCGT
CGATTTCTGAATACCGTTGCTGCAGATCATCAAACGAAAACGTGCTCATT
CGACATCACACAGCGTACGAACGTCCGTCACACAATCACGGCACCGCACA
ACACGGGGCGACAGCACACGATTGCACACAAACGCAACGCCCACACGATC
CATCCACCACCCCACCCGCAGGAGCGGGAGAGACTCGACAACAATGTACT
GCACAAGGCCCGCAGCCGTCGCGAGCTTCTCAAAACCTCCTTCACCAAGG
GCTCCAGCTTCGTCCTTCCCTCGCAGTCCAAGTCGAGTTTCTCCCACACC
AACGCCGGAGAAGCTTGTACTCCGCTGCCGGCTTTCTCATCGACCCGATG
TCCCGAGCCGAGACAAGCAGGTTGCGGCGCAGGAAGTAGCGGGGCCGGCG
AAAATGGCGGAGTCGAAACCTGCAAGGGTGGCGAGAGTTGTGCCAGCAAC
TCCGCCATTGTTTACAACAGCAGTGATAGAGATTTCCGAAACTTGTTGGC
ACAAGAACATCGCCTTCTGCAACGGAGGCACCACCACCATAACTTCAAGA
AGAGCGCTAGCTCTAGGAACTTAGCGGGAACTGACGGGGTGGCCGCGGTG
AGTTCGCCACTTCCGTGTCTGGGTGGCGGCGGCGGAAGCGACGATGATGG
TTCCGTAGGAGAAGGCCATGTTGTCGTCACCGCTAGCGTAAAAGTGTACT
CCGGAGATAAAGAGGGTTCTTTATCGCTACTGTCCGCTGGACATATGGCC
GACGGTCCCGAAGCGTCAGACATTTCTTGCGCACAAGCGGAGGTGAAACT
TGGCGGGGGAGGTGGCAGCATCATAGCGGGCCGCCAAGGCAGCACAGACG
AAACGTCTGCTTGCGGTGGACAGGACGGCGATTCACCTTGTCCGGAACGG
TTGGGCAGTGCTAGTCTTGACTGCACCAGTGTCGGGGACCGTGGGGAACG
GCTTGGCGAAGCACTTCGTGGCGGTAAAGGGCAACACCTTGCATCGAGCG
AAAATGGAGAATATTCCACCGACCAGGGTTCGTCGACGATAGCAGCGATA
GGATTGACGGAAGGTTCAGCTGCAGCAGCAGCAGAACAAAATGGAGCCGC
GGTGGTCGCGAAGGAACTGGCCGATAGAGAGAACAGTTCATCTTCGGCAA
CGGCACCACGATTATCTGTCGAGGGCACTCCTTGTCGTCCGGACGTGGAA
GATGACGTGGTGGTAGGGCAAAAGGGAAGGCCGCCAGAATCAACTACAAC
AGGCTTGGACTGGTACAAATGCAGCCGGCTCAGTGCTAAGGCAGGGGGGG
CGTAGGCGGGGTGGCGGCCGCAGGCCGACGTGTGGGATCCCAAGGCTGAA
CTTCGGTGGCTGGCTGCGCGTGGGCATCACTCTTTGCCAAAGGCGTAGGC
TC
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig734:18645..24396+

>mRNA_E_fasciculatus_S2_contig734.15529.1 ID=mRNA_E_fasciculatus_S2_contig734.15529.1|Name=mRNA_E_fasciculatus_S2_contig734.15529.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1452bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig734:18645..24396+ (Ectocarpus fasciculatus EfasUO2)
ATGGGAACGGAAAAGAAGGAAGATTTCCGTGACTTGGTTGCTCCAGCCTC
CAACAACGAGGAGTTGGGTCAAAAACATTGCTCCCGCCCACGCAATGATC
GAGGCAACGCCGGCGTGGGTCGACCGCTACAAGCACGGAAACAGCGTCGA
GGAAACCGCCAGGGAAAAGGCACGGGCCCTGTCAAGATCTGGTGCTGCCC
GAGCACGTCGGCGCTGCGCGAGGAGGCGTGTGCTAACCTAAATGCGATGA
CCAGACCGGGGCTGTGGCGGGAAAAAGCTCACCGGTCAGAGAAGGTGGAC
GCCGGCTATCGTCAACTCGAGAGACTCAGAGAAAGTTACAAGTCAGACCG
ACAGCGGGGAGTGGCCGGCGGCAAGCGCCGCTTCTTGTCCTTGCTGCGAG
AAGAGATGAGCGAGGACCAGAGGGAACGGTGGATGAAACGCAGAGCGTTA
ATGAGGGCTGACCGCTTTACGGTGGGGCAGAGGAGAGAACTGCGGGAATG
GTTTGACTGCCTGGACAAGGACGGGTCCGGAGAGATAGATTCCTCGGAAT
TGTCGCACCCGTTGCTGTGTACCGGCCTTGCGCGGAGCGCCCTTGAAGTA
GGTCGCCTGGTGCGGCAAGTGGACAAGGACGGATCGGGGGAGATAGGGTT
TCACGAGTTCCTGGCGATTCTCCAGCCCAAGGGGGCAACCGCCGGAAAGA
GCGCCATCGATAAGATAACTCATCTCCAAGATGTCAAAAAGGCGCATGGC
AGTGATATGCAGACCGTGGTGGCGATAGAGCGGAGGTCTTTGCTCATGAA
GGAGATCCTCGACGAAGCCGCGTTCAGGAGCTCTGTGCTGGAGGATGTCG
AGGAGAAGAGGGAAATAGCCCAATCGAACGGCGACCATCGGGCTTTGAAA
GAGCTGAAAGAACGGGAAGCGAAGCTGGAACGTCGCAGAGTGGAGAATAA
CCTCTTCATTCAGGCGGTCAGCGACGCCACAGACTTCGAACAGGAGCGGG
AGAGACTCGACAACAATGTACTGCACAAGGCCCGCAGCCGTCGCGAGCTT
CTCAAAACCTCCTTCACCAAGGGCTCCAGCTTCGTCCTTCCCTCGCAGTC
CAAGTCGAGTTTCTCCCACACCAACGCCGGAGAAGCTTGTACTCCGCTGC
CGGCTTTCTCATCGACCCGATGTCCCGAGCCGAGACAAGCAGGTTGCGGC
GCAGGAAGTAGCGGGGCCGGCGAAAATGGCGGAGTCGAAACCTGCAAGGG
TGGCGAGAGTTGTGCCAGCAACTCCGCCATTGTTTACAACAGCAGTGATA
GAGATTTCCGAAACTTGTTGGCACAAGAACATCGCCTTCTGCAACGGAGG
CACCACCACCATAACTTCAAGAAGAGCGCTAGCTCTAGGAACTTAGCGGG
AACTGACGGGGTGGCCGCGCGTCAGACATTTCTTGCGCACAAGCGGAGGT
GA
back to top