mRNA_E_fasciculatus_S2_contig733.15520.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig733.15520.1
Unique NamemRNA_E_fasciculatus_S2_contig733.15520.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig733.15520.1 vs.
Match: ENTH (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCB9_9PHAE)

HSP 1 Score: 708 bits (1828), Expect = 2.280e-243
Identity = 436/528 (82.58%), Postives = 446/528 (84.47%), Query Frame = 1 
Query:  379 SGLDLDTDSSFEYDDLDDVWSDEDXXXXXXXXXXXXXXXXXDWARGAAXXXXXXXXXXXXXXXXXXXXSKMGRASAMSMSSMRDRLNRARQRASVAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTVEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYILHRFAADGSTEHASNLKESVAVLRTHHDSRRKVNYFDMDTICDVKAPSWSGEDVAPMAEFLQVYADFVLRRTTQFGPGFAELLDAFTMLLGGGEVMTAVAGLVSVGSKCCHLREEQEGAIAVAAAVQVAHDIRDLVEVCAAQLDYLAREWDARSTYRREVNEWYAFLYENRRPVEALIDRANELAERHKLVAVRPLAATPLVLKLRDEEVALEEQA-------ALEAKQEQYSLDEGEEEEVEDLDQPSTDAYQRRPAALEAGKRHARGFNGTGXXXXXXXXXXXXXXXXXXXGVTTSRPQRDAGAREESVPPPSAPAPVAARARGTDAKDRGTGVRPSPPAGGSASPTQKRSVSSGA 1941
            SG+DLDTDSSFEYDDLD+VWSDE XXXXXXXXXXXXXXXXX       XXXXX               SKMGRA AMSMSSMRDRLNRARQRAS AYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTVEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYILHRFAADGS EHASNLKESVAVLRTHHDSRRKVNYFDMDTICDVKAPSWSGEDVAPMAEFLQ YADFVLRRTTQFGPGFAELLDAFTMLLGGGEVMTAVAGLVSVGSKCCHL EEQEGAIAVAA VQVAHDIRDLVEVCAAQLDYLAREWDARSTYR EV +WYAFLYEN+RPVEALIDRANELAERHKLVAVRPLAATPLVLKLRDEEVALEEQA       ALEA++EQYSLDEG+EE VE LD+P TDAYQRRPAALEAGKRHARGFN TG  XXXXXXXXXXX        TTSRPQRDA AR+ESVPP                       RPSPPA   A PTQ+RS S GA
Sbjct:  160 SGMDLDTDSSFEYDDLDNVWSDEXXXXXXXXXXXXXXXXXX--XXXXXXXXXXRAGRRARLGGEPPKASKMGRAKAMSMSSMRDRLNRARQRASSAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTVEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYILHRFAADGSIEHASNLKESVAVLRTHHDSRRKVNYFDMDTICDVKAPSWSGEDVAPMAEFLQGYADFVLRRTTQFGPGFAELLDAFTMLLGGGEVMTAVAGLVSVGSKCCHLHEEQEGAIAVAAVVQVAHDIRDLVEVCAAQLDYLAREWDARSTYRAEVEDWYAFLYENQRPVEALIDRANELAERHKLVAVRPLAATPLVLKLRDEEVALEEQARAKKDVAALEAEKEQYSLDEGDEE-VEALDRPLTDAYQRRPAALEAGKRHARGFNSTGRGXXXXXXXXXXXGGVAG---TTSRPQRDARARKESVPPXXXXXXXXXXXXXXXXXXXXXXARPSPPADVGAGPTQRRSASPGA 681
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig733.15520.1 vs.
Match: Predicted (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2T5_PHATC)

HSP 1 Score: 142 bits (359), Expect = 6.930e-32
Identity = 99/258 (38.37%), Postives = 138/258 (53.49%), Query Frame = 1 
Query:  667 YREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTVEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYILHRFAADGSTEHASNLKESVAVLRTHHDSRRKVNYFDMDTICDVKAPSWSGEDVAPMAEFLQVYADFVLRRTTQFGPGFAEL-----LD------AFTMLLGGGEVMTAVAGLVSVGSKCCHLREEQEGAIAVAAAVQVAHDIRDLVEVCAAQLDYLAREWDARSTYRREVNEWYAFLYENRRP 1407
            YRE K L SSE+E V+LKATRPDD PVK KH+E L+  T ++   +++Y  V+RKLW KMA+K+WR + K+LYILHRF+ADG+ EHA+ LK  +  LR   D +RK  YF+   +    A   + E++   A F+  YA +VL R   FG  F E+     LD      A T      E + A A L+  G   C L+E++       AA +VA D+  L    A  L+   +  D +      + +W  F  E   P
Sbjct:  246 YREVKGLTSSELEQVMLKATRPDDTPVKGKHVERLVGVTYQISPRYDIYDAVLRKLWGKMAEKDWRTTIKSLYILHRFSADGAPEHAAALKARLRELRRTRDPKRKDKYFNSKQLL---AGESNPENIKFRA-FMSRYAHYVLLRAQCFGGLFDEISQEPKLDKKKPPKAITTTSLRSEHLEAAAMLLKAGV-ACQLKEDEACENTAIAAERVASDLIGLTTSVAIALNRALKSSDLKGGDPELLKKWCEFYSEELLP 498
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig733.15520.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGQ7_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.530e-31
Identity = 93/268 (34.70%), Postives = 137/268 (51.12%), Query Frame = 1 
Query:  643 ARQRASVAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTVEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYILHRFAADGSTEHASNLKESVAVLRTHHDSRRKVNYFDMDTICDVKAPSWSGEDVAPMAEFLQVYADFVLRRTTQFGPGFAELLDAFTMLLGGG--------------------EVMTAVAGLVSVGSKCCHLREEQEGAIAVAAAVQVAHDIRDLVEVCAAQLDYLAREWDARSTYRREVNEWYAF 1386
            A++R     RE K ++SSE+E V+LK+TRPDD PVK KH+E L+  T ++P   ++Y P++RKLWSKMA+ +WRV+ KALY+LHRF+ DG  +HAS LK ++  LR   D +RK   F       + A S + +++     F+  YA +VL R   FG  F E+    T    G                     E + A   ++  G  C  L+ E++  I  + A +VA D+  L    A  L+   R  D +      V +W  F
Sbjct:  233 AKERTGKYVREVKGMLSSELEQVLLKSTRPDDTPVKAKHMERLIGITYQLPGHLDLYDPILRKLWSKMAEPDWRVTCKALYVLHRFSTDGGPDHASQLKANLRTLRRTKDPKRKEGKFFNSR--QLLAGS-TNDEIQKYRAFMARYAHYVLLRVQCFGGNFVEIAPRQTDAKSGASSKKKSRKPEKPITSVALRSEHLDAAKMILKAGCACA-LKNEEDNEITASCAERVAIDMNGLTTAVAVALNRALRG-DDKDIDHSIVKKWCEF 495
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig733.15520.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNF0_HETAK)

HSP 1 Score: 131 bits (330), Expect = 1.550e-31
Identity = 72/168 (42.86%), Postives = 102/168 (60.71%), Query Frame = 1 
Query:  631 RLNRARQRASVAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTVEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYILHRFAADGSTEHASNLKESVAVLRTHHDSRRKVNYFDMDTICDVKAPSWSGEDVAPMAEFLQVYADFVLRRTTQFGPGFAEL 1134
            RL     +A  A RE K L+SSE+E V+LKATRP DLPVK KHL+AL+      P+EF+VY PV++KLW+K  + +WR + KA +++H FA  G   HA++LK     L   + ++ + NYFD + +    A    G +VA  A+F + Y ++ L R   F PGF EL
Sbjct:    2 RLRALADQARAAARELKGLVSSELEAVLLKATRPTDLPVKDKHLDALLFCCSSTPQEFDVYTPVLKKLWAKANEGDWRSAVKAAFVIHSFARRGPGHHAAHLKSLPRTLSGQYCAKLRGNYFDAERLAF--AGEEEGGEVAAYAKFARRYVEYALARARLFAPGFPEL 167
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig733.15520.1 vs.
Match: ENTH (domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZTH1_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.470e-30
Identity = 94/261 (36.02%), Postives = 129/261 (49.43%), Query Frame = 1 
Query:  667 YREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTVEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYILHRFAADGSTEHASNLKESVAVLRTHHDSRRKVNYFDMDTICDVKAPSWSGEDVAPMAEFLQVYADFVLRRTTQFGPGFAELL--------------DAFTMLLGGGEVMTAVAGLVSVGSKCCHLREEQEGAIAVAAAVQVAHDIRDLVEVCAAQLDYLAREWDARSTYRREVNEWYAFLYENRRP 1407
            YRE K L SSE+E V+LKATRPDD PVK KH E L+  T ++   +++Y  V+RKLW+KMA+K+WR + KALYILHRF+ADGS EHA  LK  V  LR   D +RK  +F    +        + E+ A    FL  YA +VL R   FG  F E+                  T      + + A   L+  G  C  L++ +E      A  +VA D+  L       L    ++ D +      + +W  F  E+  P
Sbjct:  220 YREVKGLTSSELEQVMLKATRPDDTPVKGKHAERLVGVTYQISARYDIYDAVLRKLWAKMAEKDWRTTIKALYILHRFSADGSPEHAPALKARVRELRRTRDPKRKGKFFSSKLLL----AGDTSEETAKYRAFLGRYAHYVLLRAQCFGGMFDEIAAPSAKDTKKKKAAPKPITSTSLKADHLDAAKLLLETGLACV-LKKGEENENTALAVERVASDLLGLTTAVTGALTRALKDDDLKGADPVLIKKWCEFYSESLLP 475
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig733.15520.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZH59_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.850e-30
Identity = 71/156 (45.51%), Postives = 97/156 (62.18%), Query Frame = 1 
Query:  667 YREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTVEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYILHRFAADGSTEHASNLKESVAVLRTHHDSRRKVNYFDMDTICDVKAPSWSGEDVAPMAEFLQVYADFVLRRTTQFGPGFAEL 1134
            YRE K L SSE+E V+LKAT+P+D PVK KH+E L+  T ++   +++Y  V+RKLWSKMA+K+WR   KALY+LHRF+ADG+ +H + LK  +  LR   D +RK  YF+   +    A      + A    FL  YA +VL R   FG  F E+
Sbjct:   75 YREVKGLTSSELEQVMLKATQPNDAPVKGKHVERLVGVTYQISGRYDIYDAVLRKLWSKMAEKDWRTKIKALYVLHRFSADGAPDHQAALKARLRELRRTRDPKRKEKYFNSKQLLGGDA----SPENAKYRAFLARYAHYVLLRAQCFGGMFNEI 226
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig733.15520.1 vs.
Match: ENTH (domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBW9_9STRA)

HSP 1 Score: 131 bits (330), Expect = 3.010e-29
Identity = 74/159 (46.54%), Postives = 99/159 (62.26%), Query Frame = 1 
Query:  667 YREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTVEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYILHRFAADGSTEHASNLKESVAVLRTHHDSRRKVNYFDMDTICDVKAPSWSGEDVAPMAEF---LQVYADFVLRRTTQFGPGFAEL 1134
            +RE K L SSE+E V+LKATRPDD PVK KH E L+  T ++   +++Y  V+RKLW+KMA+K+WR + KALYILHRF+ADGS +HA  LK  V  LR   D +RK  +F    +        +G+D    A+F   +  YA +VL R   FG  F E+
Sbjct:   30 FREVKGLTSSELEQVMLKATRPDDTPVKGKHAERLVGVTYQISGRYDIYDAVLRKLWAKMAEKDWRTTIKALYILHRFSADGSPDHAPALKARVRELRRTRDPKRKGKFFSSKLL-------QAGDDKPESAKFRAFMGRYAHYVLLRAQCFGGMFDEI 181
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig733.15520.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VB79_9STRA)

HSP 1 Score: 134 bits (338), Expect = 4.420e-29
Identity = 75/181 (41.44%), Postives = 112/181 (61.88%), Query Frame = 1 
Query:  598 ASAMSMSSMRDRLNRARQRASVAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTVEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYILHRFAADGSTEHASNLKESVAVLRTHHDSRRKVNYFDMDTICDVKAPSWSGEDVAPMAEFLQVYADFVLRRTTQFGPGFAELLD 1140
            A+  S+++++D+  +    +S  YRE K L SSE+E V+LKATRPDD PVK KH+E L+  T ++   +++Y  V+RKLW+KMA+K+WR + KALYILHRF++DG  +H + LK  +  LR   D +RK  YF+   + +  A      +  P   F+  YA +VL R   FG  F E+ +
Sbjct:  258 AATSSITAVKDKSTKI---SSGIYREIKGLTSSELEQVMLKATRPDDQPVKGKHVERLVGVTYQISGRYDIYDAVLRKLWNKMAEKDWRTTIKALYILHRFSSDGGPDHQAALKARLRELRRTRDPKRKEKYFNSKQLLEGDATP----ENQPFRAFMARYAHYVLLRAQCFGGMFTEIKE 431
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig733.15520.1 vs.
Match: ENTH (domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K193_FISSO)

HSP 1 Score: 134 bits (336), Expect = 4.690e-29
Identity = 89/251 (35.46%), Postives = 134/251 (53.39%), Query Frame = 1 
Query:  667 YREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTVEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYILHRFAADGSTEHASNLKESVAVLRTHHDSRRKVNYFDMDTICDVKAPSWSGEDVAPMAEFLQVYADFVLRRTTQFGPGFAELL-----------DAFTMLLGGGEVMTAVAGLVSVGSKCCHLREEQEGAIAVAAAVQVAHDIRDLVEVCAAQLDYLAREWDARSTYRREVNEWYAF 1386
            YRE K L SSE+E V+LKAT+PDD PVK KH+E L+  T ++  +F++Y  V+RKLW KM +++WR + KA+YI+HRF+ADG+ EHA+ LK  +  LR   D +RK  +F+   +    A   + E+V   A FL  Y+ +VL RT  +G  F E+               T      E + + A L+  G   C L++ +E      A  +V  D+  L    A  L+   ++ D +      + +W AF
Sbjct:  218 YREVKGLTSSELEQVMLKATKPDDTPVKGKHVERLVGVTYQIGPKFDIYDAVLRKLWGKMVERDWRTTMKAVYIMHRFSADGAPEHAAALKARLRELRRTRDPKRKDKFFNTKQLL---AGDTTPENVKFRA-FLSRYSHYVLLRTQCYGGMFDEIAVLPKSDKKKAPKPITSTCLRVEQLESAAVLLKAGL-ACQLKDGEECENTALAVERVVADMIGLCSAVAVALNRALKDDDLKGADPAILKKWCAF 463
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig733.15520.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8JKL4_9STRA)

HSP 1 Score: 132 bits (331), Expect = 5.230e-29
Identity = 89/258 (34.50%), Postives = 132/258 (51.16%), Query Frame = 1 
Query:  667 YREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTVEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYILHRFAADGSTEHASNLKESVAVLRTHHDSRRKVNYFDMDTICDVKAPSWSGEDVAPMAEFLQVYADFVLRRTTQFGPGFAELLDA-----------FTMLLGGGEVMTAVAGLVSVGSKCCHLREEQEGAIAVAAAVQVAHDIRDLVEVCAAQLDYLAREWDARSTYRREVNEWYAFLYENRRP 1407
            YR+ K L SSE+E V+LKAT+PDD P K KH+E L+  T ++   +++Y  V+RKLW KM +K+WR + KALY+LHRF+ADG+ EHA++LK  +  LR   D +RK  +F+   +    A     E++   A F+  YA +VL R   F   F E+               T      E + A + L+  G   C L++ +E      A  +VA D+  L    A  L+   ++ D +      V +W  F  E   P
Sbjct:   99 YRDLKGLTSSELEQVMLKATKPDDTPAKGKHVERLVGVTYQISPRYDIYDAVLRKLWGKMCEKDWRTTMKALYVLHRFSADGAPEHAASLKARLRELRRTKDPKRKDKFFNSKQLL---AGDAKPENIKFRA-FMSRYAHYVLLRAQCFSGMFEEISSEPKVDKKKPPKPITSTALRTEHLEAASMLLKAGL-ACQLKDGEECENTAIAVERVASDLIGLTSAVAMALNRALKDVDLKGGDPALVKKWCEFYSEQLLP 351
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig733.15520.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ENTH2.280e-24382.58domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Predicted6.930e-3238.37protein n=2 Tax=Phaeodactylum tricornutum TaxID=28... [more]
Hypothetical1.530e-3134.70protein n=1 Tax=Leptocylindrus danicus TaxID=16351... [more]
Hypothetical1.550e-3142.86protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
ENTH1.470e-3036.02domain-containing protein n=1 Tax=Pseudo-nitzschia... [more]
Hypothetical1.850e-3045.51protein (Fragment) n=1 Tax=Pseudictyota dubia TaxI... [more]
ENTH3.010e-2946.54domain-containing protein (Fragment) n=1 Tax=Fragi... [more]
Hypothetical4.420e-2941.44protein n=1 Tax=Ditylum brightwellii TaxID=49249 R... [more]
ENTH4.690e-2935.46domain-containing protein n=2 Tax=Fistulifera sola... [more]
Hypothetical5.230e-2934.50protein n=1 Tax=Amphora coffeiformis TaxID=265554 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig733contigE_fasciculatus_S2_contig733:21849..27448 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score747.3
Seed ortholog evalue7.6e-213
Seed eggNOG ortholog2880.D7FQ31
Model size2409
Hectar predicted targeting categoryother localisation
Exons8
EggNOG OGs2ECB5@1,2SI7J@2759
Ec32 ortholog descriptionENTH/VHS
Ec32 orthologEc-01_007660.1
Cds size2409
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig733.15520.1prot_E_fasciculatus_S2_contig733.15520.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig733 21849..27448 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842397.1279354-CDS-E_fasciculatus_S2_contig733:21848..226701696842397.1279354-CDS-E_fasciculatus_S2_contig733:21848..22670Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig733 21849..22670 -
1696842397.1407743-CDS-E_fasciculatus_S2_contig733:22715..227691696842397.1407743-CDS-E_fasciculatus_S2_contig733:22715..22769Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig733 22716..22769 -
1696842397.1515687-CDS-E_fasciculatus_S2_contig733:23270..234861696842397.1515687-CDS-E_fasciculatus_S2_contig733:23270..23486Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig733 23271..23486 -
1696842397.1621187-CDS-E_fasciculatus_S2_contig733:23863..240431696842397.1621187-CDS-E_fasciculatus_S2_contig733:23863..24043Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig733 23864..24043 -
1696842397.172931-CDS-E_fasciculatus_S2_contig733:24572..247251696842397.172931-CDS-E_fasciculatus_S2_contig733:24572..24725Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig733 24573..24725 -
1696842397.183599-CDS-E_fasciculatus_S2_contig733:25010..251721696842397.183599-CDS-E_fasciculatus_S2_contig733:25010..25172Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig733 25011..25172 -
1696842397.1939733-CDS-E_fasciculatus_S2_contig733:25820..260721696842397.1939733-CDS-E_fasciculatus_S2_contig733:25820..26072Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig733 25821..26072 -
1696842397.2046628-CDS-E_fasciculatus_S2_contig733:26878..274481696842397.2046628-CDS-E_fasciculatus_S2_contig733:26878..27448Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig733 26879..27448 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig733.15520.1

>prot_E_fasciculatus_S2_contig733.15520.1 ID=prot_E_fasciculatus_S2_contig733.15520.1|Name=mRNA_E_fasciculatus_S2_contig733.15520.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=803bp
LCSGDAPVALSAVDEEASCCSSSGCSTRGGGDRMTPTSARSAPAAGPEGE
DGRKSRRKSAAATATTKKRGASPSSADVAGVTRAPAVAAAAATAAGKSSR
APPRQRRQPPAVPPPSASGNHRDDDGSGLDLDTDSSFEYDDLDDVWSDED
EEDDGGWSNDDDDDDEDDWARGAAGGPGGRAGRRTGRGGEPPKASKMGRA
SAMSMSSMRDRLNRARQRASVAYREAKSLMSSEMEGVVLKATRPDDLPVK
PKHLEALMRPTVEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYILHRF
AADGSTEHASNLKESVAVLRTHHDSRRKVNYFDMDTICDVKAPSWSGEDV
APMAEFLQVYADFVLRRTTQFGPGFAELLDAFTMLLGGGEVMTAVAGLVS
VGSKCCHLREEQEGAIAVAAAVQVAHDIRDLVEVCAAQLDYLAREWDARS
TYRREVNEWYAFLYENRRPVEALIDRANELAERHKLVAVRPLAATPLVLK
LRDEEVALEEQAALEAKQEQYSLDEGEEEEVEDLDQPSTDAYQRRPAALE
AGKRHARGFNGTGGGGGGGGRSSSGGGGDGGVGVTTSRPQRDAGAREESV
PPPSAPAPVAARARGTDAKDRGTGVRPSPPAGGSASPTQKRSVSSGARAS
SGTARRPAARRPPGGGSATAEAARARGREEGEEGGGGGGGGGVRKTPLGG
GGDSAVDGDGVTSRVSKRRRSSSSSSSSAQARREEERRAGAPLAKGGERH
AAAAAASAAVADVGPAPASSSSRSSRPHSSSASSKKTRKSKRESLENRPR
SG*
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mRNA from alignment at E_fasciculatus_S2_contig733:21849..27448-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig733.15520.1 ID=mRNA_E_fasciculatus_S2_contig733.15520.1|Name=mRNA_E_fasciculatus_S2_contig733.15520.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5600bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig733:21849..27448- (Ectocarpus fasciculatus EfasUO2)
CTTTGTTCAGGCGACGCCCCTGTCGCCCTATCTGCGGTAGACGAAGAAGC
TTCTTGCTGCAGCAGTAGCGGATGCAGCACCAGAGGGGGGGGAGACCGGA
TGACGCCAACCTCTGCCCGCTCAGCGCCCGCAGCTGGACCAGAAGGCGAA
GACGGCCGGAAGAGCAGGCGAAAATCCGCAGCAGCAACCGCCACCACGAA
AAAGCGCGGTGCCTCTCCAAGCAGCGCAGACGTCGCGGGGGTAACAAGAG
CGCCGGCGGTGGCGGCGGCGGCGGCAACTGCAGCGGGGAAATCGTCCCGC
GCCCCGCCGCGGCAACGACGACAACCCCCTGCCGTGCCGCCGCCCTCGGC
GTCTGGAAACCACCGGGACGACGACGGCTCGGGCTTGGACTTGGACACGG
ACAGCAGCTTCGAGTACGACGACTTGGACGACGTTTGGTCAGACGAGGAC
GAGGAGGACGATGGGGGGTGGAGCAATGACGACGACGACGACGATGAGGA
CGACTGGGCCAGGGGTGCGGCCGGCGGCCCCGGCGGCAGGGCGGGCCGAA
GGACCGGGCGGGGGGGCGAGGTAAGGCGGGGTTTCCGGTGCTGCTGAGCA
TGGAGGGGCGTGGGGTCCTCGTTTGTTTCGTGCCTTTTTGAGCCATTGAA
CCATGTGACCCTTAAGAAGATGCAGAAACACCGCCACCTTCTCGGCAGAA
TAATTCGCTAGCGGGGCGGGGAGGTGGGGGGTGGACGCTGTACTCAGGAT
AGTCCCGTGAGCTAGACTTGGGGGCACTGGCGTTTGGTGGCTGCCGTACA
TGTTTCGCTCCACTCTTGAGGCCCTCTTTCAGCGGTTGTGGGTTGCGGCA
TCCTTACACAACGCGCTTCGGAACTATAGCGTGCACAGCTATTTTTTTTT
CAGCCTTCGTGCTCCGGCGGCATTTTGTGAGGGCGGACAGCGATAGACTG
ACTCAATCGTGTTTGTGCCTAGGCCTCACCGTAGTGTCGCTTGCGCTTGG
TTTGAGAGCTGCGTGTTTTCATGCCCGCACGTGAGACACTGCTGTTCGAG
TCGTGCTGCTGCATGTGTCGATGCATGTGGGCGCAGAGGGGGTAAACGTG
CTTTTCCATATCCCGACAAGCTCCTCTTCGACCGGGTGTGTCGTGCCAGG
TCGAAATCTGGAAGCATTCATGCCCTCGCTTGTTTGACATGGGGGGATAG
ATTCCCACATCTATACTGATGGTGTCGGGGACGGGCACACAGCGCACCGA
TCTGCGCACTCACGCACCATGCACCTTGGTCCTCCCGCGGGCGCCCCCTG
GCCTCATTCCCGCCGCACATGCGACTGTCGTCATGTTTTGTTGTTTCGTT
TACAACGACGGGAATCACGCAAATAGCCGCCGAAAGCCAGCAAGATGGGC
AGAGCGAGCGCGATGAGCATGTCGAGCATGCGGGACCGGCTGAACAGGGC
GCGGCAGCGGGCGAGCGTCGCGTACCGTGAGGCGAAGAGCCTCATGTCGT
CGGAGATGGAAGGGGTGGTGCTTAAGGCCACGAGGCCGGACGACCTTCCC
GTGAAGCCGAAGCACCTGGAGGCGCTCATGCGTCCCACGGTGGAAATGCC
GAAGGAGTTCAACGTCTACCTGCCGGTGGTGAGAGTTGCTTGTGCTTAAG
TGGCAGTCGAGCGCTGGTAGGGTATTGTGCTGCCACTCATAGTTTTGCCA
CCCCAGGAGGAAGGATTGGCCATCGGTGATCGGCCCTGTGTGAACAATGC
TCCATCCTCTCGAGGACGCACGGTAAATGGTCTGACCGTTCAGGCACGCA
AAACATGGGAATACGCCCGTCTGTCGGGGGGTAATGTGACCACCTTGGTT
CCCCGCGTCCACCACAAAATTGCCCGTTTTCAACGAACATCGTTCTCGAG
AGGCGGCGTAATATGTCGTCGGCTGGTACTCGGTGGGGTTGCACCAAGGC
ATATCCACGCAGCCCTTCCTCCCTACGTTTGAAACGAGATGATACCTTCG
GTGCGCTATTCGATTGGTAGGATGTGCGCGGTATGCGACCCCCCGTGCCT
GCGAACTCTTGTGCACTGGTACATTATGCCACACGTTTGCAGGGGCGAAC
GCGAATCAGTCTTCGAACTTCGCAGGGGTTTTGTCTCCGTCTGAGCTTTT
TGTTCCCTTCGCCCTTTTCTATCTCGATAAAAACAGTCGAGGAGTCTGTG
CCGTTGCTGACGTCATTCTTTTTGTCGCCTGATCTGGTGTCGATACCCTC
TTTGCCGATGCACCTGGAACCCAAAGGTGAGAAAGCTGTGGTCGAAGATG
GCGGATAAGGAATGGAGGGTCTCGGCCAAGGCGCTGTACATCCTGCACCG
CTTCGCTGCGGACGGCAGCACCGAGCACGCCTCCAACCTCAAGGAGTCGG
TGGCCGTGCTGAGGACCCACCACGACTCGCGGAGGAAGGTAGGAGGGGGA
GAGAGAGTTACACCTACTACCAGATCGTTGCATCGGATTGTACTCGTTCG
TGACGGGCGTGAAGTTTTCTCCCGCCACGGACGCCTTACAACGCGTGGGG
TTTGTACCAAGGTTTGTCGAAAGAGCTATCATAGCCCTTCATGTGTACCC
CCCCCCTGTCCGCCATGTACGGGCACACAACACATATGCCGTAACCTCTT
ACTGGCACTCTTCGCGCTCAAATGTTTTTTCCCATCACACTTTTGCTCGT
TGTCCTTACTGCTGCATACGTAGGTGAACTACTTCGACATGGACACGATC
TGTGACGTCAAGGCGCCCTCGTGGTCCGGCGAGGACGTGGCTCCCATGGC
GGAGTTCTTGCAAGTGTACGCCGACTTCGTGCTGCGGAGGACGACTCAGT
TCGGGCCTGGCTTCGCGGAGCTCTTGGTGAGAAAGAAGTTGAAGGCGTGC
GCTTGTGTGTTCGTGTTTTTTTTCTTCCGCGGACATCGCGACTGCGCTGA
TCGACCAACCACCGACAGGACGTTTTTCCTTGAGAAAAGAAGAGAAATGG
AGCTGTGTAATCCGCAGGGTCCTCCGACAGGGAGGCGCGGAGGTCAGTTG
AGATAGGTACATACACGTCAGTAGAAGGCAGATGTGTGCGTGTGTCTTTT
GTGTATTCCCGACTGAGCCTCCCGGGTGGCTGTTGAACAGACATCCTTGA
CAGGGTGGTTAGTTACGGGTCACCCGAAGGCGCTAGGTGTTTTGTGTGTA
GGTGTGTTGACGTGGAGCGGTGTAGTCGCCAAGGCTCACCGGACCGTTCC
GGACCCCGTCTGTTGCTGCCTAAATGCTTTCAAAATATTTTTTGTGTCAT
GTGTGTCCTCATGAATTACCCCTTCGGGTGAGATGATTTGTGCCTTTCGT
GACGCTTCCCCCGTTTTGTTTGCTTGCCTTTGTCTGATGGCGTGGTGTTC
CAAAGGATGCCTTCACGATGCTTCTGGGGGGAGGCGAGGTGATGACGGCG
GTGGCGGGGCTGGTGTCCGTGGGGTCGAAGTGCTGCCATCTCCGCGAGGA
GCAAGAAGGCGCCATAGCCGTGGCGGCGGCGGTGCAGGTGGCGCACGACA
TTCGCGATCTGGTGGAGGTCTGCGCCGCCCAACTGGTAAGAAGGGGGATG
GAGGCGGTACACGCGGGCCAGAGGCGGTCCTGTACATGCGGGAGTGGAGC
TTTCGTATTTGGCATGAGCTTCAAGCGTCCCTCACCTTGGTTATGGCTGT
TGGAAGTATTTGCGGAAGAAATGCTGTGTTGCGGTTCTTGCTACTCTTGT
CGTCGACCCTCCCAGGTGTAGGTGTAGGTAGATGTTCCCTAAGAACGCTT
GTCCCGTACCACGCCATTGTGCCATGTTTCATGTGGTTTGGGCTGAACTC
ACGGGAATGCGCTCTGTGCGGGCGGGCCACTCAGCCGTTGTTTCCCACCC
ACCGGTTCAATTTCAACGCTGCTGTTGTTGTTGTGGGACGTCTTGCCCCT
TCCTTCCCCAAGGACTACCTAGCGAGGGAGTGGGACGCACGGTCGACCTA
CCGGAGGGAGGTGAACGAGTGGTACGCCTTCCTCTACGAGAACCGCCGGC
CCGTGGAGGCGCTGATAGACCGGGCCAACGAGCTCGCCGAGAGGCACAAG
CTGGTCGCGGTGCGCCCCCTTGCGGCGACGCCTCTCGTGCTCAAGCTGCG
CGACGAGGAAGTGGCGCTGGAAGAGCAGGTGAGAAAGAAAATACCGCGTA
GTATAGATACCAATCACCTGGAGGGCTTTTTGTTGTTGGGTCTGTGGTGG
CCCCGGGCGGACGCCGGAGGTGGTCATGGTTGTGGGCATGTGTTGGTGGG
TGGGTTGGGGAAGGCTTCTGCTCATCGGCCGTGCCCATCCTCGAGCTGGT
CGTGTGTTGAATTTTGGTCGGTTTTTGCTCCAGAAGAAGCGATGGGTCGA
GGGGTACCTGTTCGTTGTCTTGAGGAGGACGAGGCGATGATGCTACGTTT
TTACGGTGTGTTCTGGGAGAGAGTTCCGTAGATTCTGTTGGGCGAATAGG
TGGAGGCGTGGAAGTCGTTGCTTCCTTGCGTCAAGTCAAGCCGATCCGTA
TTGATGTTTACGTTCCGCCTCACGACGTGGACGAGTCGTCGTGCCGCATT
TGACCATGGCCCTGACGCTCACCTATTCGCAACTCCCACCGTCCTCTTGA
CACGTTGTGCGTTTCATTTGGTGGTCCAGGCCGCACTGGAAGCAAAGCAA
GAGCAGTACTCCCTGGACGAAGGAGAAGAGGAGGTGGAGGACCTAGACCA
TCCGTCCTCCCTGGACGAAGGAGAAGAGGAGGTGGAGGACCTAGACCAAC
CGTCGACGGATGCCTACCAAAGGAGGCCCGCGGCTCTCGAAGCAGGCAAG
AGACACGCGAGAGGCTTCAACGGCACGGGCGGCGGCGGCGGCGGCGGGGG
CCGCAGCAGCAGCGGGGGCGGTGGCGACGGGGGGGTAGGCGTGACGACCA
GCCGCCCGCAGCGAGACGCGGGAGCACGAGAGGAGTCCGTCCCGCCGCCG
TCGGCCCCGGCTCCAGTAGCCGCTAGAGCGAGGGGAACAGACGCGAAAGA
CCGGGGCACCGGCGTAAGGCCGTCACCACCCGCTGGCGGTTCCGCCAGTC
CTACACAGAAGAGGAGTGTTTCGTCTGGAGCTAGAGCTAGTAGTGGTACC
GCGAGACGACCGGCGGCTCGGCGGCCGCCAGGCGGGGGCTCGGCGACAGC
AGAAGCGGCGAGGGCACGGGGGCGAGAAGAGGGAGAAGAGGGCGGCGGCG
GCGGCGGTGGTGGTGGTGTAAGGAAGACTCCATTAGGCGGGGGTGGCGAC
AGCGCGGTTGATGGAGACGGCGTGACGAGCCGGGTTTCGAAACGAAGGCG
TTCGTCGTCGTCATCGTCGAGCAGCGCCCAGGCGCGGCGAGAGGAGGAAC
GGCGAGCAGGAGCGCCCTTGGCCAAGGGGGGTGAAAGACACGCTGCTGCT
GCTGCTGCTTCTGCTGCTGTTGCTGACGTAGGGCCGGCTCCCGCGAGTAG
CAGCAGCAGGAGTAGCCGACCACACTCTTCTTCTGCCTCCTCCAAGAAGA
CGCGAAAAAGCAAGCGGGAGTCCTTGGAAAACCGGCCGCGTTCGGGATGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig733:21849..27448-

>mRNA_E_fasciculatus_S2_contig733.15520.1 ID=mRNA_E_fasciculatus_S2_contig733.15520.1|Name=mRNA_E_fasciculatus_S2_contig733.15520.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2409bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig733:21849..27448- (Ectocarpus fasciculatus EfasUO2)
CTTTGTTCAGGCGACGCCCCTGTCGCCCTATCTGCGGTAGACGAAGAAGC
TTCTTGCTGCAGCAGTAGCGGATGCAGCACCAGAGGGGGGGGAGACCGGA
TGACGCCAACCTCTGCCCGCTCAGCGCCCGCAGCTGGACCAGAAGGCGAA
GACGGCCGGAAGAGCAGGCGAAAATCCGCAGCAGCAACCGCCACCACGAA
AAAGCGCGGTGCCTCTCCAAGCAGCGCAGACGTCGCGGGGGTAACAAGAG
CGCCGGCGGTGGCGGCGGCGGCGGCAACTGCAGCGGGGAAATCGTCCCGC
GCCCCGCCGCGGCAACGACGACAACCCCCTGCCGTGCCGCCGCCCTCGGC
GTCTGGAAACCACCGGGACGACGACGGCTCGGGCTTGGACTTGGACACGG
ACAGCAGCTTCGAGTACGACGACTTGGACGACGTTTGGTCAGACGAGGAC
GAGGAGGACGATGGGGGGTGGAGCAATGACGACGACGACGACGATGAGGA
CGACTGGGCCAGGGGTGCGGCCGGCGGCCCCGGCGGCAGGGCGGGCCGAA
GGACCGGGCGGGGGGGCGAGCCGCCGAAAGCCAGCAAGATGGGCAGAGCG
AGCGCGATGAGCATGTCGAGCATGCGGGACCGGCTGAACAGGGCGCGGCA
GCGGGCGAGCGTCGCGTACCGTGAGGCGAAGAGCCTCATGTCGTCGGAGA
TGGAAGGGGTGGTGCTTAAGGCCACGAGGCCGGACGACCTTCCCGTGAAG
CCGAAGCACCTGGAGGCGCTCATGCGTCCCACGGTGGAAATGCCGAAGGA
GTTCAACGTCTACCTGCCGGTGGTGAGAAAGCTGTGGTCGAAGATGGCGG
ATAAGGAATGGAGGGTCTCGGCCAAGGCGCTGTACATCCTGCACCGCTTC
GCTGCGGACGGCAGCACCGAGCACGCCTCCAACCTCAAGGAGTCGGTGGC
CGTGCTGAGGACCCACCACGACTCGCGGAGGAAGGTGAACTACTTCGACA
TGGACACGATCTGTGACGTCAAGGCGCCCTCGTGGTCCGGCGAGGACGTG
GCTCCCATGGCGGAGTTCTTGCAAGTGTACGCCGACTTCGTGCTGCGGAG
GACGACTCAGTTCGGGCCTGGCTTCGCGGAGCTCTTGGATGCCTTCACGA
TGCTTCTGGGGGGAGGCGAGGTGATGACGGCGGTGGCGGGGCTGGTGTCC
GTGGGGTCGAAGTGCTGCCATCTCCGCGAGGAGCAAGAAGGCGCCATAGC
CGTGGCGGCGGCGGTGCAGGTGGCGCACGACATTCGCGATCTGGTGGAGG
TCTGCGCCGCCCAACTGGACTACCTAGCGAGGGAGTGGGACGCACGGTCG
ACCTACCGGAGGGAGGTGAACGAGTGGTACGCCTTCCTCTACGAGAACCG
CCGGCCCGTGGAGGCGCTGATAGACCGGGCCAACGAGCTCGCCGAGAGGC
ACAAGCTGGTCGCGGTGCGCCCCCTTGCGGCGACGCCTCTCGTGCTCAAG
CTGCGCGACGAGGAAGTGGCGCTGGAAGAGCAGGCCGCACTGGAAGCAAA
GCAAGAGCAGTACTCCCTGGACGAAGGAGAAGAGGAGGAGGTGGAGGACC
TAGACCAACCGTCGACGGATGCCTACCAAAGGAGGCCCGCGGCTCTCGAA
GCAGGCAAGAGACACGCGAGAGGCTTCAACGGCACGGGCGGCGGCGGCGG
CGGCGGGGGCCGCAGCAGCAGCGGGGGCGGTGGCGACGGGGGGGTAGGCG
TGACGACCAGCCGCCCGCAGCGAGACGCGGGAGCACGAGAGGAGTCCGTC
CCGCCGCCGTCGGCCCCGGCTCCAGTAGCCGCTAGAGCGAGGGGAACAGA
CGCGAAAGACCGGGGCACCGGCGTAAGGCCGTCACCACCCGCTGGCGGTT
CCGCCAGTCCTACACAGAAGAGGAGTGTTTCGTCTGGAGCTAGAGCTAGT
AGTGGTACCGCGAGACGACCGGCGGCTCGGCGGCCGCCAGGCGGGGGCTC
GGCGACAGCAGAAGCGGCGAGGGCACGGGGGCGAGAAGAGGGAGAAGAGG
GCGGCGGCGGCGGCGGTGGTGGTGGTGTAAGGAAGACTCCATTAGGCGGG
GGTGGCGACAGCGCGGTTGATGGAGACGGCGTGACGAGCCGGGTTTCGAA
ACGAAGGCGTTCGTCGTCGTCATCGTCGAGCAGCGCCCAGGCGCGGCGAG
AGGAGGAACGGCGAGCAGGAGCGCCCTTGGCCAAGGGGGGTGAAAGACAC
GCTGCTGCTGCTGCTGCTTCTGCTGCTGTTGCTGACGTAGGGCCGGCTCC
CGCGAGTAGCAGCAGCAGGAGTAGCCGACCACACTCTTCTTCTGCCTCCT
CCAAGAAGACGCGAAAAAGCAAGCGGGAGTCCTTGGAAAACCGGCCGCGT
TCGGGATGA
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