mRNA_E_fasciculatus_S2_contig7325.15516.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7325.15516.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG2_9PHAE) HSP 1 Score: 505 bits (1300), Expect = 4.170e-176 Identity = 250/335 (74.63%), Postives = 268/335 (80.00%), Query Frame = 1
Query: 13 GKRYCTVDELLPLERSPDSTVSSEWSEEQGGISTPPYGCDCASSKARYFCPNLGSGGYPRWVPRAVARGDCRSVTREEMS-RGAPFPPDSKVLFYGNSYMRQAVEAILCLFQKDVATKKVRFVSA-NATNTTYLEVPGDTPCRACWVWHGFKDTLLKSGCIGGDGGDDHGGEEACRCDDDRGEFLFSNGAVMHFYFADRDEDKSITDALAPHDKVDFSDYTAVFANPGNNPSIKADAVLEAAFELQAAGVPFFWLNVYEGKGDPQSWNSRQRETDFPGSGAKFVRVGDMAHGLQRLTRKVVEQLEGYDPHFCMPGPPDEVGILLLKLLWALHHNK 1011
G RYCTVDELLPL++SP S +SSEWS+ QGG+ PPYGCDCA SKARYFCPNLGSG YPRWVPRAV RGDCRS TREEMS RGAPFPPDSKVLFYGNS+MRQ +EAILCLFQKDV +K++RFVSA NA T YLEVPGDTPCRAC VW FKDTLL SGCIG SNGAV+HFYFA+ DEDK ITDALAPH K D S YTAVFANPGN PS++ADAVL+AA ELQAAGVPFFWL+ YEGKGDPQ WNSRQRETDF SGAKFVRV D+ GL LTRKVVE+ DPHFCMPGPPDEVGILLLKLLWALHH K
Sbjct: 118 GIRYCTVDELLPLKKSPHSALSSEWSQGQGGVWKPPYGCDCAFSKARYFCPNLGSGVYPRWVPRAVTRGDCRSATREEMSSRGAPFPPDSKVLFYGNSHMRQTLEAILCLFQKDVVSKRLRFVSATNANETAYLEVPGDTPCRACSVWTFFKDTLLNSGCIGXXXXXXXXXXXXXXXXXXXX-XXXSNGAVVHFYFANHDEDKRITDALAPHHKEDLSYYTAVFANPGNKPSVEADAVLDAAVELQAAGVPFFWLSTYEGKGDPQRWNSRQRETDFWESGAKFVRVFDIVQGLHSLTRKVVERTVENDPHFCMPGPPDEVGILLLKLLWALHHEK 451
BLAST of mRNA_E_fasciculatus_S2_contig7325.15516.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G974_ECTSI) HSP 1 Score: 298 bits (762), Expect = 2.010e-98 Identity = 140/167 (83.83%), Postives = 147/167 (88.02%), Query Frame = 1
Query: 523 EACRCDDDRGEFLFSNGAVMHFYFADRDEDKSITDALAPHDKVDFSDYTAVFANPGNNPSIKADAVLEAAFELQAAGVPFFWLNVYEGKGDPQSWNSRQRETDFPGSGAKFVRVGDMAHGLQRLTRKVVEQLEGYDPHFCMPGPPDEVGILLLKLLWALHHNKNGSY 1023
E RCDDD GEF FSNGAV+HFYFA+RDEDK ITDALAPHDK DFS YTAVFANPGN PS++ADAVL+AAFELQAAGVPFFWL+ YEGKGDPQ WNS QRETDFPGSGAKFVRV DM GL RLTRKVVE+ DPHFCMPGPPDEVGILLLKLLWALHH KNGSY
Sbjct: 23 ETLRCDDDHGEFFFSNGAVVHFYFANRDEDKRITDALAPHDKEDFSYYTAVFANPGNKPSVEADAVLDAAFELQAAGVPFFWLSTYEGKGDPQRWNSPQRETDFPGSGAKFVRVVDMVQGLHRLTRKVVERTVEDDPHFCMPGPPDEVGILLLKLLWALHHEKNGSY 189
BLAST of mRNA_E_fasciculatus_S2_contig7325.15516.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P7_ECTSI) HSP 1 Score: 235 bits (599), Expect = 3.660e-70 Identity = 130/326 (39.88%), Postives = 185/326 (56.75%), Query Frame = 1
Query: 73 VSSEWSEEQGGISTPPYGCDCASS-------KARYFCPNLGSGGYPRWVPRAVARGDCRSVTREEMSRGAPFPPDSKVLFYGNSYMRQAVEAILCLFQKDVATKKVRFV---SANATNTTYLEVPGDTPCRACWVWHGFKDTLLKSGCIGGDGGDDHGGEEACRCDDDRGEFLFSNGAVMHFYFADRDEDKSITDALAPHDKVDFSDYTAVFANPGNNPSIKADAVLEAAFELQAAGVPFFWLNVYEGKGDPQSWNSRQRETDFPGSGAKFVRVGDMAHGLQRLTRKVVEQLEGYDPHFCMPGPPDEVGILLLKLLWALHHNKNGS 1020
+S W ++ + PP+ C C+ S A YFCPNLG+GGYP+W G C R + + P PP +VLFYGNS++RQ VE I+C + + ++ +R V + A T ++ D CR+C + TLL+ CI D EEACRCDDD F F NGA +H++FA ++E+K DAL + ++S Y AV N GN+P ++ VL A L+ GVP FW + YEG+GD +W ++ F SGA+FV V M L+ LT+ VVE +PHFCMPGPP+E+GILLL++ WA++ + G+
Sbjct: 113 LSGMW--DKSSMVAPPFDCTCSGSGRAGRALNASYFCPNLGTGGYPKWS----TSGGCERRERSAL-QNEPLPPGFRVLFYGNSHLRQVVEGIVCAYSSSIRSRCLRVVVDGESLAQEDTLVDE--DLQCRSCVYSRKLRRTLLEHECISEDAK-----EEACRCDDDESVFEFDNGAAIHYHFAHKEENKRFEDALQ-YRGTEYSSYDAVVGNLGNDPRMEVSEVLRVANLLKEEGVPLFWTSAYEGEGDVGAWLPEEQAL-FWDSGARFVPVHRMVKSLKYLTKGVVEGEN--NPHFCMPGPPNEIGILLLEMAWAVYAERGGA 420
BLAST of mRNA_E_fasciculatus_S2_contig7325.15516.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF6_9PHAE) HSP 1 Score: 233 bits (595), Expect = 4.920e-69 Identity = 129/342 (37.72%), Postives = 188/342 (54.97%), Query Frame = 1
Query: 19 RYCTVDELLPLERSPDS-------TVSSEWSEEQGGISTPPYGCDCASSKARYFCPNLGSGGYPRWVPRAVARGDCRSVTREEMSRGAPFPPDSKVLFYGNSYMRQAVEAILCLFQKDVATKKVRFVSANATNTTY-LEVPGDTPCRACWVWHGFKDTLLKSGCIGGDGGDDHGGEEACRCDDDRGEFLFSNGAVMHFYFADRDEDKSITDALAPHDKVDFSDYTAVFANPGNNPSIKADAVLEAAFELQAAGVPFFWLNVYEGKGDPQSWNSRQRETDFPGSGAKFVRVGDMAHGLQRLTRKVVEQLEGYDPHFCMPGPPDEVGILLLKLLWALHHNKNGS 1020
R CTVD+L+P + + +S W ++ + PP+ C C + KA YFCPNLG+GGYP+W RS + E P PP +VLFYGNS++RQ VE I+C + + ++ +R V + V D CR C H ++ LL+ CI + +EAC CDD+ F F NGA +H++FA ++E+K DAL + ++S Y V N GN+P ++ VL A L+ GV FW + YEG+GD +W ++ F SGA+FV V M L+ LT+ VVE +PHFCMPGPP+E+GILLL++ WA++ + +
Sbjct: 91 RACTVDDLVPPHGNYEDGGGDGGYDLSGMW--DKSSMVAPPFDCTCRTLKASYFCPNLGTGGYPKWNTSGACERRERSALQNE-----PLPPAFRVLFYGNSHLRQVVEGIVCAYSTSIRSRCLRVVVGGGSLAPEDALVDEDLQCRGCVNSHKQRNMLLEHECIS-----EEAKKEACSCDDNESVFEFDNGAAIHYHFAHKEENKRFEDALK-YRGTEYSFYDVVVGNLGNDPRMEVSEVLRVANLLKEEGVTLFWTSAYEGEGDVGAWLPEEQAL-FWDSGARFVPVHRMVESLKYLTKGVVEGEN--NPHFCMPGPPNEIGILLLEMAWAVYAERGDA 416
BLAST of mRNA_E_fasciculatus_S2_contig7325.15516.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J2_9PHAE) HSP 1 Score: 210 bits (535), Expect = 1.110e-63 Identity = 108/230 (46.96%), Postives = 135/230 (58.70%), Query Frame = 1
Query: 331 LCLFQKDVATKKVRFVSANATNTTYLEVPGDTPCRACWVWHGFKDTLLKSGCIGGDGGDDHGGEEACRCDDDRGEFLFSNGAVMHFYFADRDEDKSITDALAPHDKVDFSDYTAVFANPGNNPSIKADAVLEAAFELQAAGVPFFWLNVYEGKGDPQSWNSRQRETDFPGSGAKFVRVGDMAHGLQRLTRKVVEQLEGYDPHFCMPGPPDEVGILLLKLLWALHHNKNGS 1020
+C++ V K+ + N + G+ CRAC G + + GC+ D DD ACRCDDD EFLF NGAV+H+YFA D +KSI DAL PH V S Y AV AN GN P + D V EAA ELQA VPF WL+ Y G+G WN Q+E F SGA+FV VG M GL T+ VE G DPHFC+PGPPDE+G+LLLK++WA+H + +
Sbjct: 1 MCIYWNKVVAKRATYQQPG--NGVDRWIHGNAQCRACT---GLQQQQVNYGCLDQDVRDD-----ACRCDDDHAEFLFQNGAVVHYYFASTDPNKSIKDALLPHGNVSLSYYDAVVANNGNGPEMAVDVVCEAALELQALSVPFLWLSTYVGRGSVDLWNDAQQE-QFTQSGARFVNVGHMMFGLSNFTKGAVEG--GNDPHFCLPGPPDELGLLLLKIIWAIHQERGAA 217
BLAST of mRNA_E_fasciculatus_S2_contig7325.15516.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBA5_9PHAE) HSP 1 Score: 210 bits (534), Expect = 1.580e-63 Identity = 110/230 (47.83%), Postives = 135/230 (58.70%), Query Frame = 1
Query: 331 LCLFQKDVATKKVRFVSANATNTTYLEVPGDTPCRACWVWHGFKDTLLKSGCIGGDGGDDHGGEEACRCDDDRGEFLFSNGAVMHFYFADRDEDKSITDALAPHDKVDFSDYTAVFANPGNNPSIKADAVLEAAFELQAAGVPFFWLNVYEGKGDPQSWNSRQRETDFPGSGAKFVRVGDMAHGLQRLTRKVVEQLEGYDPHFCMPGPPDEVGILLLKLLWALHHNKNGS 1020
+C+ V K+V + N + G+ CRAC GF + GC+ D DD ACRCDDD E+LF NGAV+H+YFA D KSI DAL PH V S Y AVFAN GN P + D V EAAFELQA VPF WL+ Y+G G WN Q+E F SGA+FV VG M GL T+ VE + DPHFC+PGPPDE+G LLLK++WAL+ + +
Sbjct: 1 MCIHWNKVVAKRVTYQQPG--NGVDRWIHGNAQCRACT---GFDQQQVDYGCLDQDVRDD-----ACRCDDDHAEYLFQNGAVVHYYFAGTDPKKSIKDALLPHGNVSLSHYDAVFANDGNWPKMAVDDVCEAAFELQALSVPFLWLSTYDGHGSVDLWNDAQKEK-FSQSGARFVNVGHMLFGLSNFTKGAVE--DRVDPHFCLPGPPDELGFLLLKIIWALYQERGAA 217
BLAST of mRNA_E_fasciculatus_S2_contig7325.15516.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z986_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.410e-29 Identity = 96/335 (28.66%), Postives = 139/335 (41.49%), Query Frame = 1
Query: 58 SPDSTVSSEWSEEQGGISTPPYGCDCASSKARYFCPNLGSGGYPRWVPRAVARGDCRSVTREEMSRGAPFPPDSKVLFYGNSYMRQAVEAILCLFQKDVATKKVRFVSANATNTTYLEVPGDTPCRACWVWHGFKDTLLKSGCIGGDGGDDHGGEEACRCDDDRGEFLFSNGAVMHFYFADRDEDKSITDALAPHDKVDFSDYTAVFANPGNNPSIKADAVLEAAFELQAAGV-PFFWLNVYEGKG------DPQSWNSRQRETDFPGSGAKFVRVGDM---AHGLQRLTRKVVEQLEGYDPHFCMPGPPDEVGILLLK----LLWALHHNKNGS 1020
SP W E++ P Y C C +KARY C + P WVPRA+ +G+CR++ + PP ++VLF GNS+MRQ VE+ LC + +VA + V SA + PCR + H + +G G C DDR F SNGA + + F R+ +K+I + P DY V AN GN P + + + L G+ W+ +Y G D ++ N+ T + + D+ G+ T L D HFCMP P D++ L L W L + GS
Sbjct: 50 SPAQLADGSW-EQRTAHQEPLYDCSCPLAKARYHCHEFNAVDGPVWVPRALVKGECRALPHNPL-----VPPGARVLFAGNSHMRQLVESGLCAHRHEVARRNV---SAGVLEDISI------PCRGFRLKHYLDGCPYEPSVLGVAPGQ-------LECSDDRATFTLSNGATVSYVFMHREVNKTIDQFIGPTFGTSLRDYDIVVANAGNAPDMLLSSFADEVGPLVTQGIIKALWVPLYWGSDALDEFRDARTLNNGNLPTASQRAALDAITFFDLRILTSGVASFTVAKRAHLSR-DGHFCMPSPVDDISDTLFAHVRYLWWHLALERGGS 361
BLAST of mRNA_E_fasciculatus_S2_contig7325.15516.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1L833_HETAK) HSP 1 Score: 90.9 bits (224), Expect = 8.880e-17 Identity = 79/295 (26.78%), Postives = 118/295 (40.00%), Query Frame = 1
Query: 127 CDCASSKARYFCPNLGSGGYPRWVPRAVARGDCRSVTREEMSRGAPFPPDSKVLFYGNSYMRQAVEAILCLFQKDVATKKVRFVSANATNTT----YLEVPGDTPCRACWVWHGFKDTLLKSGCIGGDGGDDHGGEEACRCDDDRGEFLFSNGAVMHFYFADRDEDKSITDALAPHDKVDFSDYTAVFANPGNNPSIKADAVLEAAFELQAAGVPFFWLNVYEGKGDPQSWNSRQRETD-FPGSGAKFVRVGDMAHG-LQRLTRKVVEQLEGYDPHFCMPGPPDEVGILLLKLLW 993
C C +K RY C Y ++P A+ +G CR T E + P P SK L +GNSY+RQ +EA+LC+F +A+K+V T +EV G T CR W F C C D+ + F NGA +HF ++ I L + + + D N + +++ L FW + E N + D F S + + + R K+++Q G D HFC+PG PD+V I LL ++
Sbjct: 110 CSCPHAKGRYHCHGKDLQAY--FLPTAIEKGLCRWHTVEYLKEN-PLPAGSKTLLFGNSYLRQLMEAVLCMFSDSIASKEVVLQEEGITRQRGKYPMVEV-GQTECRG-GPWE-FNAQHFLYDCPDSQKNQT---PNVTECYDNLMKVSFKNGAELHFIYSFESTIPYIPKQLPGVNSLQYFDVIMTNGVYANRMKAETFVMVKEKNGLDGKSPRLFWAGLNE--------NDYENAKDLFLASKIEVFKAHIINRSQCSRRVGKILQQDAG-DRHFCLPGVPDDVAISLLHFIY 386 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7325.15516.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7325.15516.1 >prot_E_fasciculatus_S2_contig7325.15516.1 ID=prot_E_fasciculatus_S2_contig7325.15516.1|Name=mRNA_E_fasciculatus_S2_contig7325.15516.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=342bp GGDGGKRYCTVDELLPLERSPDSTVSSEWSEEQGGISTPPYGCDCASSKAback to top mRNA from alignment at E_fasciculatus_S2_contig7325:99..6693- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7325.15516.1 ID=mRNA_E_fasciculatus_S2_contig7325.15516.1|Name=mRNA_E_fasciculatus_S2_contig7325.15516.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6595bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7325:99..6693- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7325:99..6693- >mRNA_E_fasciculatus_S2_contig7325.15516.1 ID=mRNA_E_fasciculatus_S2_contig7325.15516.1|Name=mRNA_E_fasciculatus_S2_contig7325.15516.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1026bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7325:99..6693- (Ectocarpus fasciculatus EfasUO2)back to top |