mRNA_E_fasciculatus_S2_contig7315.15507.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7315.15507.1 vs.
Match: Sexually (induced protein 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXL2_ECTSI) HSP 1 Score: 438 bits (1127), Expect = 1.430e-154 Identity = 201/212 (94.81%), Postives = 205/212 (96.70%), Query Frame = 3
Query: 111 MLSKLSALLF-AALVGTSLAYCPNSCSGHGSCGTQDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAVAANNAHPEVECSAKGTCDRTMGICTCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGICDYTTGLCGCFLGFFGTKCEYQTVLS 743
MLSKLSALLF AALVGTSLAYCPNSCSGHGSCGT DQCTCYLRPNGDVAW+GADCSLRTCPKGAAWA EAVAAN+AHPEVECSAKGTCDR GICTCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGS EGRDCSGRGICDYTTGLCGCFLGF+GT CEYQT+LS
Sbjct: 1 MLSKLSALLFFAALVGTSLAYCPNSCSGHGSCGTNDQCTCYLRPNGDVAWIGADCSLRTCPKGAAWAKEAVAANDAHPEVECSAKGTCDRATGICTCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSIEGRDCSGRGICDYTTGLCGCFLGFYGTMCEYQTILS 212
BLAST of mRNA_E_fasciculatus_S2_contig7315.15507.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BSV2_9STRA) HSP 1 Score: 329 bits (844), Expect = 1.750e-111 Identity = 140/203 (68.97%), Postives = 162/203 (79.80%), Query Frame = 3
Query: 132 LLFAALVGTSLAYCPNSCSGHGSCGTQDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAVAANNAHPEVECSAKGTCDRTMGICTCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGICDYTTGLCGCFLGFFGTKCEYQTVL 740
+ A+ V AYCPN CSGHGSCG+ D+CTCYLRPNGD AW DCSLRTCPK AAW A AAN AHP VECS KG+C+R G C CF+NY+G+ACERT+CP DCS +GFC+TEKQLAADA TY PWDA K VGC CD G+RGPDCSLQECPSG DV+ GDG+++GRDCSGRGIC+Y GLC CF G+FGTKC++QT+L
Sbjct: 9 ITLASFVAMGAAYCPNGCSGHGSCGSNDKCTCYLRPNGDAAWTSHDCSLRTCPKSAAWVAVATAANEAHPSVECSNKGSCNRKTGECDCFDNYDGIACERTVCPGDCSNHGFCYTEKQLAADASKTYTKPWDAMKHVGCVCDLGYRGPDCSLQECPSGVDVLKGDGNSKGRDCSGRGICNYGAGLCKCFTGYFGTKCQHQTIL 211
BLAST of mRNA_E_fasciculatus_S2_contig7315.15507.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLA1_9STRA) HSP 1 Score: 327 bits (838), Expect = 3.080e-110 Identity = 144/207 (69.57%), Postives = 163/207 (78.74%), Query Frame = 3
Query: 129 ALLFAALVG---TSLAYCPNSCSGHGSCGTQDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAVAANNAHPEVECSAKGTCDRTMGICTCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGICDYTTGLCGCFLGFFGTKCEYQTVL 740
ALLF AL G + AYCPN CSGHGSC D+C CY RPNGD AW DCSLRTCPK AAW A AAN AHPEVECS KG C+R G C CFENY+G+ACERT+CPNDCSG G C+T+KQLAA+A TY PWDA K VGC CD G+RGPDCSL+ECPSG DV+ GDG+ +GRDCSGRGICDY+TGLC CF G+FGTKC++QT+L
Sbjct: 27 ALLFVALAGFATLAAAYCPNGCSGHGSCSGNDKCVCYTRPNGDPAWTEHDCSLRTCPKAAAWVAVATAANEAHPEVECSNKGLCNRKTGECECFENYDGIACERTVCPNDCSGRGICYTQKQLAAEASMTYTEPWDAMKHVGCVCDLGYRGPDCSLEECPSGPDVLLGDGNEKGRDCSGRGICDYSTGLCKCFTGYFGTKCQHQTIL 233
BLAST of mRNA_E_fasciculatus_S2_contig7315.15507.1 vs.
Match: Tnc (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W0K4_SYMMI) HSP 1 Score: 311 bits (798), Expect = 1.560e-104 Identity = 136/201 (67.66%), Postives = 155/201 (77.11%), Query Frame = 3
Query: 138 FAALVGTSLAYCPNSCSGHGSCGTQDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAVAANNAHPEVECSAKGTCDRTMGICTCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGICDYTTGLCGCFLGFFGTKCEYQTVL 740
F ++ ++AYCPN CSGHGSCGT D+CTCY R +G+ AW DCS RTCPK AAW + ANNAHP VECS KG CDR G C CFENYEG+ACERT+CPN CS G CFTEKQLAA+A Y++PWDAEK VGC CD G RGPDCSL ECPSGADV+ G G+ GRDCSGRG+CDYT G C CF G++GTKCEYQT+L
Sbjct: 8 FLSIATAAVAYCPNGCSGHGSCGTNDKCTCYARIDGEAAWTFPDCSGRTCPKSAAWIGDVAGANNAHPVVECSNKGICDRETGECQCFENYEGIACERTVCPNSCSDAGVCFTEKQLAAEASRDYDSPWDAEKHVGCICDLGRRGPDCSLVECPSGADVLKGYGNEAGRDCSGRGLCDYTDGTCSCFHGYYGTKCEYQTIL 208
BLAST of mRNA_E_fasciculatus_S2_contig7315.15507.1 vs.
Match: Sig3-like (protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC41_THAPS) HSP 1 Score: 311 bits (798), Expect = 1.670e-104 Identity = 135/209 (64.59%), Postives = 160/209 (76.56%), Query Frame = 3
Query: 120 KLSALLFAALVGTSLAYCPNSCSGHGSCGTQDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAV-AANNAHPEVECSAKGTCDRTMGICTCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGICDYTTGLCGCFLGFFGTKCEYQTVLS 743
K ++ A LV T+ A+CPN C G+GSCG D+CTCYLRPNGD AW DCS RTCP G+AW+ E AN+AHP ECS KGTCDR G C CFENY+G ACERT+CPNDCSG G C T+K LA G TY TPWDAEK +GCKCD G+RGPDCS +ECPSG D++GGDG+ +GR+CSGRG C++ TGLC CF G+FG KC++QTVLS
Sbjct: 3 KALLVVLATLVATAGAHCPNGCKGNGSCGINDKCTCYLRPNGDPAWTAHDCSERTCPYGSAWSSETTNGANDAHPHAECSNKGTCDRNSGECVCFENYDGKACERTLCPNDCSGRGICLTQKALAIFQGATYETPWDAEKHLGCKCDVGYRGPDCSRKECPSGEDILGGDGAVKGRECSGRGNCNFITGLCQCFDGYFGNKCQHQTVLS 211
BLAST of mRNA_E_fasciculatus_S2_contig7315.15507.1 vs.
Match: Sexually (induced protein 3 n=1 Tax=Thalassiosira weissflogii TaxID=1577725 RepID=Q9Y0F6_THAWE) HSP 1 Score: 311 bits (797), Expect = 3.130e-104 Identity = 135/199 (67.84%), Postives = 157/199 (78.89%), Query Frame = 3
Query: 132 LLFAALVGTSLAYCPNSCSGHGSCGTQDQCTCYLRPNGDVAWVGADCSLRTCPKGAAW-AMEAVAANNAHPEVECSAKGTCDRTMGICTCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGICDYTTGLCGCFLGFFGTKCE 725
L+ A L+ T AYCPN+CSGHGSCG D+CTCYLRPNGD AW G DCS+RTCPKG AW A EAV+ ++ HP +ECS KG CDR G C CFENY+G ACERTICPNDCSG G C +K LAA G TY+TPWDAEK +GCKCDAG+RGPDCS +ECPSG D++G +G +EGRDCSGRG C+Y TGLC CF G+FG +C
Sbjct: 6 LVLATLLATVRAYCPNACSGHGSCGINDKCTCYLRPNGDPAWTGHDCSMRTCPKGNAWVAEEAVSLDDVHPRMECSNKGMCDRETGECVCFENYDGKACERTICPNDCSGRGICLPQKSLAALEGATYDTPWDAEKHLGCKCDAGYRGPDCSQKECPSGDDILGREGGSEGRDCSGRGKCNYVTGLCQCFTGYFGNRCH 204
BLAST of mRNA_E_fasciculatus_S2_contig7315.15507.1 vs.
Match: EGF-like (domain-containing protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4Z3_AURAN) HSP 1 Score: 304 bits (778), Expect = 3.530e-101 Identity = 132/193 (68.39%), Postives = 148/193 (76.68%), Query Frame = 3
Query: 165 AYCPNSCSGHGSCGTQDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAVAA-NNAHPEVECSAKGTCDRTMGICTCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGICDYTTGLCGCFLGFFGTKCEYQTVL 740
AYCPN CSGHGSCG+ D+CTCYLRPN D AW ADCS RTCP AW VA NN H ECS G CDR G C CF+ YEG+ACERT CPNDCS G C+T+KQLA +A TY+TPWDA K VGC CD GFRGPDCSLQECPSG DV+ GDG+T+GRDCSGRG+CDY +GLC CF G++GTKC+ QTVL
Sbjct: 37 AYCPNGCSGHGSCGSDDRCTCYLRPNNDSAWQAADCSERTCPMDLAWVKYPVAGENNVHESTECSNMGICDRKSGECECFDGYEGIACERTSCPNDCSARGICYTQKQLATEAATTYDTPWDAMKHVGCVCDLGFRGPDCSLQECPSGTDVLSGDGNTKGRDCSGRGLCDYDSGLCKCFSGYYGTKCQQQTVL 229
BLAST of mRNA_E_fasciculatus_S2_contig7315.15507.1 vs.
Match: Tubular (mastigoneme protein n=1 Tax=Ochromonas danica TaxID=2986 RepID=C4B7Q8_OCHDN) HSP 1 Score: 301 bits (771), Expect = 1.980e-100 Identity = 134/203 (66.01%), Postives = 154/203 (75.86%), Query Frame = 3
Query: 132 LLFAALVGTSLAYCPNSCSGHGSCGTQDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAVAANNAHPEVECSAKGTCDRTMGICTCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGICDYTTGLCGCFLGFFGTKCEYQTVL 740
LL A L+ + A CPN C+GHGSCG D+CTCY R +G+ AW ADCS RTCPK +AW + AN+AHP VECS KG CDR G C CF NY+G+ACER ICPN CS G CFT+KQLA DA TY TPWDAEK+VGC CD G RGPDCSL ECPSG DV+ G GS GRDCSGRG+CDY++G+C CF G++GTKCEYQTVL
Sbjct: 6 LLLAFLLAVAQAACPNGCNGHGSCGANDKCTCYTRIDGEPAWTYADCSGRTCPKSSAWVGDVQNANDAHPVVECSNKGVCDRKTGECKCFANYDGIACERPICPNKCSDAGVCFTQKQLAVDAARTYATPWDAEKEVGCVCDLGRRGPDCSLFECPSGPDVLKGFGSEAGRDCSGRGLCDYSSGICNCFHGYYGTKCEYQTVL 208
BLAST of mRNA_E_fasciculatus_S2_contig7315.15507.1 vs.
Match: Hypothetical (protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SS37_9STRA) HSP 1 Score: 301 bits (770), Expect = 3.120e-100 Identity = 135/214 (63.08%), Postives = 159/214 (74.30%), Query Frame = 3
Query: 99 LRRKMLSKLSALLFAALVGTSLAYCPNSCSGHGSCGTQDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAVAANNAHPEVECSAKGTCDRTMGICTCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGICDYTTGLCGCFLGFFGTKCEYQTVL 740
+ RKM + LL + + CPN CSGHGSCG+ D+CTCY R +GD AW ADCS RTCPK AW E N+AHP ECS KGTCDR G C C+ NY+G+AC+RTICPN CS +G CFTE QLA++AG TY+TPWDA K VGC CD G RGPDCSL ECPSGADV+GG G+ GRDCSGRGICDY++G+CGCF G++G +CEYQTVL
Sbjct: 1 MERKMFFSILLLLLITYIYCN---CPNGCSGHGSCGSNDKCTCYTRIDGDPAWTYADCSGRTCPKAIAWVGEVSNTNDAHPLTECSNKGTCDRKTGQCICYPNYDGIACDRTICPNRCSESGVCFTEYQLASEAGRTYSTPWDANKYVGCVCDLGRRGPDCSLLECPSGADVLGGYGNETGRDCSGRGICDYSSGICGCFHGYYGHRCEYQTVL 211
BLAST of mRNA_E_fasciculatus_S2_contig7315.15507.1 vs.
Match: Sexually (induced protein 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIV1_9STRA) HSP 1 Score: 291 bits (746), Expect = 1.380e-96 Identity = 127/210 (60.48%), Postives = 153/210 (72.86%), Query Frame = 3
Query: 120 KLSALLFAALVGTSLAYCPNSCSGHGSCGTQDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAVAANNAHPEVECSAKGTCDRTMGICTCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGT---YNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGICDYTTGLCGCFLGFFGTKCEYQTVL 740
KLS L A + A+CPN C+ HG C D C C+L+ + AW G DCS RTCP G AW E V A+ HP + CSAKG C+R G+C C+E YEG+ACERT+CPN+CSGNGFC+T++QL D G+ Y PWDA+K VGCKCD G+RGPDCSL+ECP+G D MGG G+ +GRDCSGRGICDYT+GLC CF GFFGTKCE QT+L
Sbjct: 2 KLSLALAAGALAQVAAHCPNFCNLHGICTANDICVCHLKNDDTPAWTGPDCSERTCPTGIAWVSEMVEASGEHPVLTCSAKGNCNRETGVCDCYEGYEGIACERTVCPNNCSGNGFCYTQQQLVDDLAGSNIEYTQPWDAQKHVGCKCDPGYRGPDCSLRECPTGPDQMGGSGAAQGRDCSGRGICDYTSGLCKCFHGFFGTKCEQQTIL 211 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7315.15507.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7315.15507.1 >prot_E_fasciculatus_S2_contig7315.15507.1 ID=prot_E_fasciculatus_S2_contig7315.15507.1|Name=mRNA_E_fasciculatus_S2_contig7315.15507.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=212bp MLSKLSALLFAALVGTSLAYCPNSCSGHGSCGTQDQCTCYLRPNGDVAWVback to top mRNA from alignment at E_fasciculatus_S2_contig7315:2445..5945- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7315.15507.1 ID=mRNA_E_fasciculatus_S2_contig7315.15507.1|Name=mRNA_E_fasciculatus_S2_contig7315.15507.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3501bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7315:2445..5945- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7315:2445..5945- >mRNA_E_fasciculatus_S2_contig7315.15507.1 ID=mRNA_E_fasciculatus_S2_contig7315.15507.1|Name=mRNA_E_fasciculatus_S2_contig7315.15507.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=636bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7315:2445..5945- (Ectocarpus fasciculatus EfasUO2)back to top |