mRNA_E_fasciculatus_S2_contig7306.15497.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7306.15497.1 vs.
Match: WSC (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN0_ECTSI) HSP 1 Score: 451 bits (1159), Expect = 9.200e-157 Identity = 224/290 (77.24%), Postives = 240/290 (82.76%), Query Frame = 1
Query: 1 MAGMRFNSTPAVIAAACLLASYQTGVQSRHLRRTLASTDRTYTHLGCFVDKKSDRVMGQKLANEEVDTEFCYDYCLDQEAPLMATQWGIECWCATEVDVDYDRHGEAGETCDYACGGDKAEICGGYDAFDLYVIESMTGGDSEPAPSPTAEXXXXXXXV----QESDDGGLDGAKNDDIVKIIDVPGDEPGGVGWADSYSVGSRCYMDSTFDHDIGIVVVDTPRGEMTIKDLYDMLAPGPGKTGRPLYNDIQCGNGPANTAKDETDCPGLVTEGPEGCGQIGPKWDLSEL 858
MAGMRFNSTPAVI AAC+LASYQTGVQSRHLR + R YTHLGCFVDKKSDRV+G KLA+EEVDTEFCYDYC +Q APLMATQWGIECWCA EVD+DY+RHGEAGE CDY CGGD EICGGY+AFDLYVIES+T D + PSPT XXXXXXX +E DG DGA NDDIVKII+VPG PGG GWADSYSVGS+CYM +TFDH IG VVDTP GEM I+DLYDML GPG GRPLYNDIQCGNGPAN A DET+CPGLVTEG GCGQIGPKWDLSEL
Sbjct: 1 MAGMRFNSTPAVIVAACVLASYQTGVQSRHLRSLAIDSTRDYTHLGCFVDKKSDRVLGNKLADEEVDTEFCYDYCEEQNAPLMATQWGIECWCANEVDLDYERHGEAGELCDYKCGGDNKEICGGYNAFDLYVIESLTTIDIDDGPSPTXXXXXXXXXXXXVQEEESDGRPDGAMNDDIVKIIEVPGATPGGAGWADSYSVGSKCYMSTTFDHGIGEEVVDTPIGEMKIRDLYDMLQAGPGSAGRPLYNDIQCGNGPANDAADETECPGLVTEGEAGCGQIGPKWDLSEL 290
BLAST of mRNA_E_fasciculatus_S2_contig7306.15497.1 vs.
Match: WSC (domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2N3_9PHAE) HSP 1 Score: 443 bits (1140), Expect = 2.510e-154 Identity = 215/287 (74.91%), Postives = 229/287 (79.79%), Query Frame = 1
Query: 1 MAGMRFNSTPAVIAAACLLASYQTGVQSRHLRRTLASTDRTYTHLGCFVDKKSDRVMGQKLANEEVDTEFCYDYCLDQEAPLMATQWGIECWCATEVDVDYDRHGEAGETCDYACGGDKAEICGGYDAFDLYVIESMTGGDSEPAPSPTAEXXXXXXXVQESDDGGLDGAKNDDIVKIIDVPGDEPGGVGWADSYSVGSRCYMDSTFDHDIGIVVVDTPRGEMTIKDLYDMLAPGPGKTGRPLYNDIQCGNGPANTAKDETDCPGLVTEGPEGCGQIGPKWDLSELE 861
MAGMRFNSTPAVIAAACLLA YQTGVQSRHLR A +DR YTHLGCFVDKKSDRVMG K+A+EEVDTEFCYDYCL + APLMATQWGIECWCATEVD++Y+RHGEA E CDY CGGDK E CGGY+AFDLYVIES+T T E DGA NDDIVKIIDVPGD PGG GWADSYSVGS+CYM +TFDH IG +VDTP GEM I+DLYDML GPG G PLYNDIQCGNGPAN A DET+CPGLV EGPEGCGQIGPKWDLSELE
Sbjct: 1 MAGMRFNSTPAVIAAACLLAFYQTGVQSRHLRTLAADSDRNYTHLGCFVDKKSDRVMGHKIADEEVDTEFCYDYCLGENAPLMATQWGIECWCATEVDLEYERHGEAEELCDYKCGGDKTENCGGYNAFDLYVIESLT----------TIERP--------------DGAMNDDIVKIIDVPGDNPGGAGWADSYSVGSKCYMSTTFDHGIGEQLVDTPIGEMKIRDLYDMLEKGPGSAGHPLYNDIQCGNGPANDAADETNCPGLVMEGPEGCGQIGPKWDLSELE 263
BLAST of mRNA_E_fasciculatus_S2_contig7306.15497.1 vs.
Match: WSC (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZB0_ECTSI) HSP 1 Score: 417 bits (1071), Expect = 1.000e-143 Identity = 204/291 (70.10%), Postives = 222/291 (76.29%), Query Frame = 1
Query: 1 MAGMRFNSTPAVIAAACLLASYQTGVQSRHLRRT-----LASTDRTYTHLGCFVDKKSDRVMGQKLANEEVDTEFCYDYCLDQEAPLMATQWGIECWCATEVDVDYDRHGEAGETCDYACGGDKAEICGGYDAFDLYVIESMTGGDSEPAPSPTAEXXXXXXXVQESDDGGLDGAKNDDIVKIIDVPGDEPGGVGWADSYSVGSRCYMDSTFDHDIGIVVVDTPRGEMTIKDLYDMLAPGPGKTGRPLYNDIQCGNGPANTAKDETDCPGLVTEGPEGCGQIGPKWDLSEL 858
MAGMRFNSTPAVIAAA LLASYQTGVQSRHLR ++R YTHLGCFVD +SDRV+G KL +EEVDTEFCYDYCL++ AP MATQWGIECWCATEVD++Y+RHGEA E CDY CGGD EICGGY AFDLY IES T D P +GA NDDIVKII+VPG PGG GWADSYSVGS+CYM +TFDH IG +VDTP GE+ I+DLYDML GPG GRPLYNDIQCGNGPAN A DET+CPGLV EGPEGCGQIGPKWDLSEL
Sbjct: 1 MAGMRFNSTPAVIAAAWLLASYQTGVQSRHLRSLDSASFATDSNRDYTHLGCFVDNQSDRVLGHKLVDEEVDTEFCYDYCLEKNAPFMATQWGIECWCATEVDLEYERHGEAEELCDYKCGGDNNEICGGYYAFDLYEIESFTTIDGPP-----------------------EGAMNDDIVKIIEVPGANPGGAGWADSYSVGSKCYMSTTFDHGIGEELVDTPIGEVKIRDLYDMLEAGPGSVGRPLYNDIQCGNGPANDAADETECPGLVMEGPEGCGQIGPKWDLSEL 268
BLAST of mRNA_E_fasciculatus_S2_contig7306.15497.1 vs.
Match: Oxt (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ2_ECTSI) HSP 1 Score: 228 bits (581), Expect = 6.800e-71 Identity = 110/143 (76.92%), Postives = 118/143 (82.52%), Query Frame = 1
Query: 1 MAGMRFNSTPAVIAAACLLASYQTGVQSRHLRR---TLASTD--RTYTHLGCFVDKKSDRVMGQKLANEEVDTEFCYDYCLDQEAPLMATQWGIECWCATEVDVDYDRHGEAGETCDYACGGDKAEICGGYDAFDLYVIESMT 414
MAGMRFNSTPAVIAAACLLASYQTGVQSRHLR +TD R YTHLGCFVD +SDRV+G KL +EEVDTE CYDYCL+Q AP MATQWGIECWCATE D++Y+RHGEA E CDY CGGD EICGGY AFDLY IES T
Sbjct: 31 MAGMRFNSTPAVIAAACLLASYQTGVQSRHLRSLDSAFLATDSNRDYTHLGCFVDNRSDRVLGYKLVDEEVDTELCYDYCLEQNAPFMATQWGIECWCATEPDLEYERHGEAEELCDYKCGGDNNEICGGYLAFDLYEIESFT 173
BLAST of mRNA_E_fasciculatus_S2_contig7306.15497.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU9_9PHAE) HSP 1 Score: 191 bits (485), Expect = 3.210e-55 Identity = 116/267 (43.45%), Postives = 142/267 (53.18%), Query Frame = 1
Query: 235 EAPLMATQWGIECWCATEV--DVDYDRHGEAGETCDYACGGDKAEICGGYDAFDLYVI-ESMTGGDSEPAPSPT-AEXXXXXXXVQES----------------------------------------------------DDGGLDGAKNDDIVKIIDVPGDEPGGVGWADSYSVGSRCYMDSTFDHDIGIVVVDTPRGEMTIKDLYDMLAPGPGKTGRPLYNDIQCGNGPANTAK--DETDCPGLVTEGPEGCGQIGPKWDLSELE 861
+A L ATQ+ IECWC +E VDY HGE G C+Y C GD+ E CGG AFD+Y I + T D + AP+P E E D ++GA ++DIV+IIDV G PGG W+DSYSVGS+CYM +TFDHDIG VVVD P+G M I +L+D+L GPG +PLYNDIQC NGP N+ + D+ CPGLV G + CGQIGP DLSELE
Sbjct: 2 DATLTATQYAIECWCTSEPKDQVDYACHGE-GALCNYDCAGDEDESCGGLSAFDVYRIGAAYTTSDGDTAPTPVDGEANNDQDNRTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVTIEGALSEDIVRIIDVEGVVPGGASWSDSYSVGSKCYMQTTFDHDIGEVVVDPPQGPMKIGELFDLLELGPGSQDQPLYNDIQCENGPTNSHQILDKILCPGLVQYGIKDCGQIGPLRDLSELE 267
BLAST of mRNA_E_fasciculatus_S2_contig7306.15497.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU7_ECTSI) HSP 1 Score: 176 bits (445), Expect = 5.210e-48 Identity = 83/122 (68.03%), Postives = 97/122 (79.51%), Query Frame = 1
Query: 502 DGAKNDDIVKIIDVPGDEPGGVGWADSYSVGSRCYMDSTFDHDIGIVVVDTPRGEMTIKDLYDMLAPGPGKTGRPLYNDIQCGNGPANTAK--DETDCPGLVTEGPEGCGQIGPKWDLSELE 861
+GA ++DIV+II+V G +PGG WADSYSVG +CYM +TFDHDIG V VDTP+G M I+DL+++L PGPG GRPLYNDIQCGNGP N+ DE CPGLV G EGCGQIGP WDLSELE
Sbjct: 256 EGAFSEDIVQIIEVEGTDPGGAYWADSYSVGGKCYMQTTFDHDIGEVEVDTPQGTMKIEDLFNLLEPGPGSEGRPLYNDIQCGNGPVNSDSLGDEFLCPGLVEYGREGCGQIGPMWDLSELE 377
BLAST of mRNA_E_fasciculatus_S2_contig7306.15497.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU8_ECTSI) HSP 1 Score: 176 bits (445), Expect = 3.580e-45 Identity = 85/123 (69.11%), Postives = 96/123 (78.05%), Query Frame = 1
Query: 499 LDGAKNDDIVKIIDVPGDEPGGVGWADSYSVGSRCYMDSTFDHDIGIVVVDTPRGEMTIKDLYDMLAPGPGKTGRPLYNDIQCGNGPANTAK--DETDCPGLVTEGPEGCGQIGPKWDLSELE 861
L+GA ++DIV+IIDV G PGG WADSYSVGS+CYM +TFDH IG V VDTP+G M I+DL+ +L PGPG GRPLYNDIQCGNGP N+ DE CPGLV G EGCGQIGP WDLSELE
Sbjct: 764 LEGAFSEDIVRIIDVEGVVPGGASWADSYSVGSKCYMQTTFDHGIGEVEVDTPQGTMKIEDLFFLLEPGPGSEGRPLYNDIQCGNGPVNSDNILDEIVCPGLVEYGIEGCGQIGPLWDLSELE 886
BLAST of mRNA_E_fasciculatus_S2_contig7306.15497.1 vs.
Match: Predicted (protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GED4_PHATC) HSP 1 Score: 148 bits (373), Expect = 1.310e-37 Identity = 68/115 (59.13%), Postives = 83/115 (72.17%), Query Frame = 1
Query: 520 DIVKIIDVPGD-EPGGVGWADSYSVGSRCYMDSTFDHDIGIVVVDTPRGEMTIKDLYDMLAPGPGKTGRPLYNDIQCGNGPANTAKDETDCPGLVTEGPEGCGQIGPKWDLSELE 861
DIV +IDV G P G WADSYS G++CY +TFDHDI V+V+TP+G MTI+ ++L PGPG GRP+YNDIQCGNGP N A DE CPG GPEGCGQIGP+W+ ++
Sbjct: 204 DIVAVIDVVGGVTPNGRSWADSYSFGNKCYCATTFDHDIADVLVETPQGWMTIRQACELLGPGPGIEGRPVYNDIQCGNGPPNNAGDEHVCPGRTDLGPEGCGQIGPRWNFDAIK 318
BLAST of mRNA_E_fasciculatus_S2_contig7306.15497.1 vs.
Match: Hypothetical (protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UW11_9STRA) HSP 1 Score: 139 bits (351), Expect = 4.340e-35 Identity = 64/110 (58.18%), Postives = 82/110 (74.55%), Query Frame = 1
Query: 526 VKIIDVPGDE-PGGVGWADSYSVGSRCYMDSTFDHDIGIVVVDTPRGEMTIKDLYDMLAPGPGKTG-RPLYNDIQCGNGPANTAKDETDCPGLVTEGPEGCGQIGPKWDL 849
V +ID+ G+E PGG+GWADSYSVG C+ ST+DH+IG + DTP G M+++ + + L PGPG+T P+YNDIQCGNGP N+A DE CPG V G +GCG IGPKW+L
Sbjct: 1 VVVIDIVGEENPGGLGWADSYSVGGDCFCISTYDHNIGTFMYDTPSGYMSVQSICEGLGPGPGRTDDTPIYNDIQCGNGPPNSAGDEQRCPGRVDIGKDGCGHIGPKWNL 110
BLAST of mRNA_E_fasciculatus_S2_contig7306.15497.1 vs.
Match: Predicted (protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G9L2_PHATC) HSP 1 Score: 145 bits (365), Expect = 5.120e-35 Identity = 65/114 (57.02%), Postives = 79/114 (69.30%), Query Frame = 1
Query: 520 DIVKIIDVPGD-EPGGVGWADSYSVGSRCYMDSTFDHDIGIVVVDTPRGEMTIKDLYDMLAPGPGKTGRPLYNDIQCGNGPANTAKDETDCPGLVTEGPEGCGQIGPKWDLSEL 858
DIV ++DV G P G WADSYSV +CY +TFDH + V+V+TPRG MT + ++L PGPG GRP+YNDIQCGNGP N A DE CPG GPEGCGQIGP+W+ +
Sbjct: 164 DIVAVVDVVGGVTPNGRSWADSYSVNDKCYCATTFDHSVADVIVETPRGRMTTRQACELLGPGPGIEGRPVYNDIQCGNGPPNNAGDEHVCPGRTDIGPEGCGQIGPRWNFDAV 277 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7306.15497.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7306.15497.1 >prot_E_fasciculatus_S2_contig7306.15497.1 ID=prot_E_fasciculatus_S2_contig7306.15497.1|Name=mRNA_E_fasciculatus_S2_contig7306.15497.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=290bp MAGMRFNSTPAVIAAACLLASYQTGVQSRHLRRTLASTDRTYTHLGCFVDback to top mRNA from alignment at E_fasciculatus_S2_contig7306:2321..4949+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7306.15497.1 ID=mRNA_E_fasciculatus_S2_contig7306.15497.1|Name=mRNA_E_fasciculatus_S2_contig7306.15497.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2629bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7306:2321..4949+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7306:2321..4949+ >mRNA_E_fasciculatus_S2_contig7306.15497.1 ID=mRNA_E_fasciculatus_S2_contig7306.15497.1|Name=mRNA_E_fasciculatus_S2_contig7306.15497.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=870bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7306:2321..4949+ (Ectocarpus fasciculatus EfasUO2)back to top |