mRNA_E_fasciculatus_S2_contig7294.15484.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7294.15484.1 vs.
Match: Catalase (is an enzyme, present in all aerobic cells, that decomposes hydrogen peroxide to molecular n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ30_ECTSI) HSP 1 Score: 198 bits (504), Expect = 7.950e-62 Identity = 102/112 (91.07%), Postives = 106/112 (94.64%), Query Frame = 1
Query: 1 VKTPGTFAFGSSLLAPSPKLTVQGLGNISLPLSNEDVGVLRGAAERAPFGHGAETKVDESVRSAWQIDGSLIGLSNEFAQAVGKKHALHAAEKLGLRAKALGVEARLYKLVM 336
V+TPGTFAFGSSLLAPSPKLTVQGLG+ISLPLSNE VG LRGAAERAPFGHG ETKVDESVR AWQID SL+GLSNEFAQAVGKK+ALHAA KLGLRAKALGVEARLYKLVM
Sbjct: 33 VETPGTFAFGSSLLAPSPKLTVQGLGSISLPLSNEHVGALRGAAERAPFGHGTETKVDESVRRAWQIDASLLGLSNEFAQAVGKKYALHAAGKLGLRAKALGVEARLYKLVM 144
BLAST of mRNA_E_fasciculatus_S2_contig7294.15484.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ33_ECTSI) HSP 1 Score: 153 bits (387), Expect = 1.080e-45 Identity = 79/102 (77.45%), Postives = 87/102 (85.29%), Query Frame = 1
Query: 1 VKTPGTFAFGSSLLAPSPKLTVQGLGNISLPLSNEDVGVLRGAAERAPFGHGAETKVDESVRSAWQIDGSLIGLSNEFAQAVGKKHALHAAEKLGLRAKALG 306
VKTP +FAFGSSLLAPSPKLTVQGLG+ISLPLSNEDVG LRGAAERAPFGHGAETKVDESVR AWQIDGSL+GLSNEFA + G++ L K G ++ LG
Sbjct: 34 VKTPESFAFGSSLLAPSPKLTVQGLGSISLPLSNEDVGTLRGAAERAPFGHGAETKVDESVRRAWQIDGSLLGLSNEFAPSRGEEVRLARCGKAGAESQGLG 135
BLAST of mRNA_E_fasciculatus_S2_contig7294.15484.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGP4_ECTSI) HSP 1 Score: 101 bits (251), Expect = 4.220e-26 Identity = 50/58 (86.21%), Postives = 55/58 (94.83%), Query Frame = 1
Query: 163 TKVDESVRSAWQIDGSLIGLSNEFAQAVGKKHALHAAEKLGLRAKALGVEARLYKLVM 336
TKVDES+R AWQIDGSL+GLSNE AQAVGKK+ALHAAE+LGLR KALGVEARLYKLV+
Sbjct: 5 TKVDESLRRAWQIDGSLLGLSNEVAQAVGKKYALHAAEELGLRTKALGVEARLYKLVI 62
BLAST of mRNA_E_fasciculatus_S2_contig7294.15484.1 vs.
Match: Uncharacterized (protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YA66_9CHLO) HSP 1 Score: 79.0 bits (193), Expect = 3.090e-15 Identity = 53/113 (46.90%), Postives = 68/113 (60.18%), Query Frame = 1
Query: 1 VKTPGTFAFGSSLLAPSPKLTVQGLGNISLPLSNEDVGVLRGAAERAPFGHGAETKVDESVRSAWQIDGSLIGLSNEFAQAVGKKHALHAAEKLGLRAK-ALGVEARLYKLVM 336
V+T G+FA L A P+L VQGLG IS+PLS +D L + APFG G ET D+SVR Q+D S + L + Q + L A + LG++ ALGVEARLYKL+M
Sbjct: 19 VQTCGSFAATGLLAAKQPRLAVQGLGTISVPLSRKDAASLLRVGKIAPFGFGNETVQDQSVRRGKQLDASRVRLHG-WEQTLQHITQL-AVDALGIKGPDALGVEARLYKLLM 129
BLAST of mRNA_E_fasciculatus_S2_contig7294.15484.1 vs.
Match: 2OG-FeII_Oxy_3 (domain-containing protein n=1 Tax=Gymnopus confluens TaxID=206315 RepID=A0A8H5HWZ0_9AGAR) HSP 1 Score: 75.9 bits (185), Expect = 1.050e-13 Identity = 46/109 (42.20%), Postives = 64/109 (58.72%), Query Frame = 1
Query: 16 TFAFGSSL-LAPSPKLTVQGLGNISLPLSNEDVGVLRGAAERAPFGHGAETKVDESVRSAWQIDGSLIGLSNEFAQAVGKKHALHA-AEKLGLRAKALGVEARLYKLVM 336
+FAFG++ AP+P LT++G+G I LPLS D ++ A +APFGH ET +D SVR ++ID S + SN A L KLG +AK +E LYKL++
Sbjct: 53 SFAFGTTCPQAPNPVLTIEGIGQIGLPLSERDANIIIQHANQAPFGHNHETVIDTSVRDTFEIDASRVRFSNPLFNAWLLSELLCTITTKLGTQAKDTSIE--LYKLLL 159
BLAST of mRNA_E_fasciculatus_S2_contig7294.15484.1 vs.
Match: 2OG-FeII_Oxy_3 (domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RNK9_SELML) HSP 1 Score: 74.3 bits (181), Expect = 3.610e-13 Identity = 41/104 (39.42%), Postives = 63/104 (60.58%), Query Frame = 1
Query: 31 SSLLAPSPKLTVQGLGNISLPLSNEDVGVLRGAAERAPFGHGAETKVDESVRSAWQIDGSLIGLSN--EFAQAVGKKHALHAAEKLGLRAKALGVEARLYKLVM 336
+S A L V+G G+++LPLSN+ L+ +++AP+G G ET +D VR AWQ++ S + +F V A+ A E LG+ A ALG++ RLYKL++
Sbjct: 27 ASKFAMPASLRVEGAGDLALPLSNDGFLKLKAVSQQAPYGKGEETLLDTDVRRAWQVEASKVSCPQTPDFFSKVVLDMAVPAMEVLGIDAAALGLDVRLYKLLL 130
BLAST of mRNA_E_fasciculatus_S2_contig7294.15484.1 vs.
Match: 2OG-FeII_Oxy_3 (domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RNN1_SELML) HSP 1 Score: 73.9 bits (180), Expect = 4.920e-13 Identity = 40/104 (38.46%), Postives = 63/104 (60.58%), Query Frame = 1
Query: 31 SSLLAPSPKLTVQGLGNISLPLSNEDVGVLRGAAERAPFGHGAETKVDESVRSAWQIDGSLIGLSN--EFAQAVGKKHALHAAEKLGLRAKALGVEARLYKLVM 336
+S A L V+G G+++LPLS + L+ +++AP+G G ET +D VR AWQ+D S + +F V A+ A E++G+ A ALG++ RLYKL++
Sbjct: 37 ASKFAMPASLRVEGAGDLALPLSGDGFLKLKAVSQQAPYGKGEETLLDTDVRRAWQVDASKVSCPQIPDFFSKVVLDMAVPAMEEMGIDAAALGLDVRLYKLLL 140
BLAST of mRNA_E_fasciculatus_S2_contig7294.15484.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A674_9CHLO) HSP 1 Score: 73.2 bits (178), Expect = 9.480e-13 Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 1 VKTPGTFAFGSSLLAPS--------PKLTVQGLGNISLPLSNEDVGVLRGAAERAPFGHGAETKVDESVRSAWQIDGSLIGLSNEFAQAVGKKHALHAAEKLGL-RAKALGVEARLYKLVM 336
+K GTFA+ S +A P+L+V+G+G +SLPL L A APFG G T +D +VR A Q+D SL+ +++ + + AAE LG+ A ALG++ARLYKL++
Sbjct: 934 IKAAGTFAWSSGDVAGEEDGESWELPELSVEGVGPLSLPLDATQAAALLAAGTPAPFGRGPHTVLDPAVRRATQLDASLVSIASTWTDLLSDITE-DAAEALGIVDAGALGIQARLYKLLL 1053
BLAST of mRNA_E_fasciculatus_S2_contig7294.15484.1 vs.
Match: uncharacterized (protein n=2 Tax=Bacidia gigantensis TaxID=2732470 RepID=UPI001D04B3FA) HSP 1 Score: 72.8 bits (177), Expect = 1.250e-12 Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 1
Query: 1 VKTPGTFA-FGSSLLAPSPKLTVQGLGNISLPLSNEDVGVLRGAAERAPFGHGAETKVDESVRSAWQIDGSLIGLSNEFAQAVGKKHALHAAEKLGLRAKALGVEARLYKLVM 336
V + G+FA FG +P +++ LG I LPLS ED + A+ +APFG G +T VDES+R WQID I L N+ Q + H +LG+ V A LYK+++
Sbjct: 34 VHSTGSFATFGVVERFANPGISIDPLGLIRLPLSEEDAKAIVRASNKAPFGKGNKTLVDESIRKTWQIDADKIQLLNDGWQECLNRIVEHVLGELGVACALTNVRADLYKMLL 146
BLAST of mRNA_E_fasciculatus_S2_contig7294.15484.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QMS1_SELML) HSP 1 Score: 72.8 bits (177), Expect = 1.280e-12 Identity = 38/95 (40.00%), Postives = 60/95 (63.16%), Query Frame = 1
Query: 58 LTVQGLGNISLPLSNEDVGVLRGAAERAPFGHGAETKVDESVRSAWQIDGSLIGLSN--EFAQAVGKKHALHAAEKLGLRAKALGVEARLYKLVM 336
+ V+G G++ LPLSN+ L+ +++AP+G G ET +D VR AWQ++ S + +F V A+ A E+LG+ A ALG++ RLYKL++
Sbjct: 489 MQVEGAGDLPLPLSNDGFLKLKAVSQQAPYGKGEETLLDTDVRRAWQVEASKVSCPQIPDFFSKVVLDMAVPAMEELGIDAGALGLDVRLYKLLL 583 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7294.15484.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7294.15484.1 >prot_E_fasciculatus_S2_contig7294.15484.1 ID=prot_E_fasciculatus_S2_contig7294.15484.1|Name=mRNA_E_fasciculatus_S2_contig7294.15484.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=113bp VKTPGTFAFGSSLLAPSPKLTVQGLGNISLPLSNEDVGVLRGAAERAPFGback to top mRNA from alignment at E_fasciculatus_S2_contig7294:3..341+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7294.15484.1 ID=mRNA_E_fasciculatus_S2_contig7294.15484.1|Name=mRNA_E_fasciculatus_S2_contig7294.15484.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=339bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7294:3..341+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7294:3..341+ >mRNA_E_fasciculatus_S2_contig7294.15484.1 ID=mRNA_E_fasciculatus_S2_contig7294.15484.1|Name=mRNA_E_fasciculatus_S2_contig7294.15484.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=339bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7294:3..341+ (Ectocarpus fasciculatus EfasUO2)back to top |