mRNA_E_fasciculatus_S2_contig7270.15465.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7270.15465.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9K7_9PHAE) HSP 1 Score: 459 bits (1180), Expect = 8.970e-150 Identity = 443/590 (75.08%), Postives = 450/590 (76.27%), Query Frame = 1
Query: 1 MVSGVTQQHRACGXXXXXXXXXXXXXXXXXXXXPSIRFEGITLELSSFSGCQFDFGKSGNLVLSFNGYTGTVSLQSS---SSSSTPKIRGE----ADSYALPLCSTSSEAGSLGVLDGAEAVAMDQSDYDMALSQLEHGDSPKSSFSVGAA--ESTTSPTTAMFNSPSAVRHACEGAQNPTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGPRXXXXXXXXXXXXXVAGAGTTAPAVSPDGQCPS-AAGTKGKPKGKRARRARGEENTSAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWIAXXXXXXXXXXXXX--ASPGPLSRSARAQIVAGVXXXXXXXXXXXGVGPMGRWGHTATMISESTMMVLGGQADDEAHQATLGDLYKFDFATESWSRPVNCDSIPRAWHSASFIKDKNLLVIFGGERTVDGCPECLDDIMVLDTDIDLLYPPAISGKSPTARSGHSAAIIGTDLVVFGGVRGR 1734
MVSGVTQQ+R XXXXXXX PSIRFEGITLELSSFSGCQFDFGKSGNLVLSFNG+TGTVSLQSS S SSTPKIRG A SYALPLC TSSEAGSLGVLDGAEAVAMDQSDYDMALSQLEHGDSPKSSFS AA ++ SP+TAMFNSPS +R ACEGAQNP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX AVSPD Q PS AA T GKPKGKRARR XXXXXX XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX ASPGPLSRSARAQIVAGV GVGPMGRWGHTATMISESTMMVLGGQADD+AHQATLGDLYKFDFATESWSRPVNCDSIPRAWHSASFIKDKNLLVIFGGERTVDGCPECLDDIMVLDTDIDLLYPPAISGKSPTARSGHSAAIIGTDLVVFGGVRGR
Sbjct: 1 MVSGVTQQYRGXXXXXXXXXIAAVDGSGGG---PSIRFEGITLELSSFSGCQFDFGKSGNLVLSFNGFTGTVSLQSSLSSSGSSTPKIRGGGARGARSYALPLCCTSSEAGSLGVLDGAEAVAMDQSDYDMALSQLEHGDSPKSSFSATAAGAAASRSPSTAMFNSPSTLRQACEGAQNPGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSPDAQGPSTAATTTGKPKGKRARRXXXXXXXXXXXXXXXXXITKTNATRAKDKTKRPAVVAXXXXXXXXXXXXXXXXXXXXXKENHPATKSPAGGTMVEAMDEEDGDDEARVQTHVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASPGPLSRSARAQIVAGVGVGARSGDG--GVGPMGRWGHTATMISESTMMVLGGQADDDAHQATLGDLYKFDFATESWSRPVNCDSIPRAWHSASFIKDKNLLVIFGGERTVDGCPECLDDIMVLDTDIDLLYPPAISGKSPTARSGHSAAIIGTDLVVFGGVRGR 585
BLAST of mRNA_E_fasciculatus_S2_contig7270.15465.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL74_ECTSI) HSP 1 Score: 325 bits (834), Expect = 2.490e-100 Identity = 336/609 (55.17%), Postives = 340/609 (55.83%), Query Frame = 1
Query: 1 MVSGVTQQHRACGXXXXXXXXXXXXXXXXXXXXPSIRFEGITLELSSFSGCQFDFGKSGNLVLSFNGYTGTVSLQSS---SSSSTPKIRGEADSYALPLCSTSSEAGSLGVLDGAEAVAMDQSDYDMALSQLEHGDSPKSSFSVGAAESTTSPTTAMFNSPSAVRHACEGAQNPTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGPRXXXXXXXXXXXXXVAGAGTTAPAVSPDGQCPS-AAGTKGKPKGKRAR---------------------------RARGEENTSAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWIAXXXXXXXXXXXXXASPGPLSRSARAQIVAGVXXXXXXXXXXXGVGPMGRWGHTATMISESTMMVLGGQADDEAHQATLGDLYKFDFATESWSRPVNCDSIPRAWHSASFIKDKNLLVIFGGERTVDGCPECLDDIMVLDTDIDLLYPPAISGKSPTARSGHSAAIIGTDLVVFGGVRGR 1734
MVSGVTQQHR GXXXXXXXXXX PSIRFEGITLELSSFSGCQFDFGKSGNLVLSFNGYTGTVSLQSS S SSTPKIRGE GGA A AGT PAVSPD Q PS AA T GKPKGKRAR RA+ + +A V XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ASPGPLSRSARAQIVAGV GVGPMGRWGHTATMISESTMMVLGGQADD+AHQATLGDLYKFDFATESWSRPVNCDSIPRAWHSASFIKDKNLLVIFGGERTVDGCPECLDDIMVLDTDIDLLYPPAISGKSPTARSGHSAAIIGTDLVVFGGVRGR
Sbjct: 1 MVSGVTQQHR--GXXXXXXXXXXIAAVDGSGGGPSIRFEGITLELSSFSGCQFDFGKSGNLVLSFNGYTGTVSLQSSLSSSGSSTPKIRGE------------------------------------------------------------------------------------GGA---------------------------------------------------------------------AAAAGTAPPAVSPDAQGPSTAATTTGKPKGKRARXXXXXXXXXXXXXXXXXXXXXXXXXAARAKDKTKRAAVVASTKTARAKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAMDEGEEDGDDAHVQTHVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP----------------ASPGPLSRSARAQIVAGVGVGARSGDG--GVGPMGRWGHTATMISESTMMVLGGQADDDAHQATLGDLYKFDFATESWSRPVNCDSIPRAWHSASFIKDKNLLVIFGGERTVDGCPECLDDIMVLDTDIDLLYPPAISGKSPTARSGHSAAIIGTDLVVFGGVRGR 436
BLAST of mRNA_E_fasciculatus_S2_contig7270.15465.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW41_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.090e-41 Identity = 78/137 (56.93%), Postives = 102/137 (74.45%), Query Frame = 1
Query: 1324 GVGPMGRWGHTATMISESTMMVLGGQADDEAHQATLGDLYKFDFATESWSRPVNCDSIPRAWHSASFIKDKNLLVIFGGERTVDGCPECLDDIMVLDTDIDLLYPPAISGKSPTARSGHSAAIIGTDLVVFGGVRGR 1734
GV P RWG TATMIS ++V GG+ DDE+ TL DL+ +D A WS P+NC+SIPR++H++ ++ KNL+++FGGER VDG ECL D+MVLDT+ L YPPA+SG P ARSGHS ++GTD++VFGG RGR
Sbjct: 270 GVPPSQRWGCTATMISNHRVVVYGGEGDDES---TLADLFVYDVAKAEWSCPLNCESIPRSFHASVYVAAKNLMLVFGGERVVDGSHECLSDLMVLDTECFLWYPPAVSGTPPLARSGHSLTVLGTDVLVFGGSRGR 403
BLAST of mRNA_E_fasciculatus_S2_contig7270.15465.1 vs.
Match: Uncharacterized (protein (Fragment) n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A3P1_9STRA) HSP 1 Score: 163 bits (412), Expect = 3.010e-40 Identity = 74/137 (54.01%), Postives = 100/137 (72.99%), Query Frame = 1
Query: 1324 GVGPMGRWGHTATMISESTMMVLGGQADDEAHQATLGDLYKFDFATESWSRPVNCDSIPRAWHSASFIKDKNLLVIFGGERTVDGCPECLDDIMVLDTDIDLLYPPAISGKSPTARSGHSAAIIGTDLVVFGGVRGR 1734
GV P RWG TATM+S ++V GG+ DDE+ TL DL+ +D WS P+NC+SIPR++H++ ++ KNL+++FGGER +DG E L D+MVLDT+ L YPPA+SG P ARSGHS ++G+D+VVFGG RGR
Sbjct: 190 GVAPSQRWGCTATMVSNQRVVVYGGEGDDES---TLSDLFVYDVVKAEWSCPLNCESIPRSFHASVYVPGKNLMLVFGGERVMDGSHESLSDLMVLDTECFLWYPPAVSGTPPLARSGHSCTVLGSDVVVFGGSRGR 323
BLAST of mRNA_E_fasciculatus_S2_contig7270.15465.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQY2_PYTOL) HSP 1 Score: 164 bits (416), Expect = 4.340e-40 Identity = 77/138 (55.80%), Postives = 100/138 (72.46%), Query Frame = 1
Query: 1324 GVGPMGRWGHTATMISESTMMVLGGQADDEAHQATLGDLYKFDFATESWSRPVNCDSIPRAWHSASFIKDKNLLVIFGGERTVDGCP-ECLDDIMVLDTDIDLLYPPAISGKSPTARSGHSAAIIGTDLVVFGGVRGR 1734
G P+ RWGHTAT ISE+ ++V GG DDE+ TLGDL+ +D WSRP+NC+SIPR WH + +++ K L+++FGGER + G + L DIMVLDTD L YPPAISG +P ARSGH+ ++G D+VVFGG RGR
Sbjct: 290 GTPPVERWGHTATRISENRVVVYGGADDDES---TLGDLFVYDLNKNEWSRPLNCESIPRTWHDSVYLESKRLMLVFGGERNMGGDQMDVLSDIMVLDTDCFLWYPPAISGVAPIARSGHTCTVVGNDIVVFGGSRGR 424
BLAST of mRNA_E_fasciculatus_S2_contig7270.15465.1 vs.
Match: Aste57867_16473 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L6C0_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.340e-39 Identity = 78/148 (52.70%), Postives = 100/148 (67.57%), Query Frame = 1
Query: 1333 PMGRWGHTATMISESTMMVLGGQADDEAHQATLGDLYKFDFATESWSRPVNCDSIPRAWHSASFIKDKNLLVIFGGERTVDGCPECLDDIMVLDTDIDLL--------------YPPAISGKSPTARSGHSAAIIGTDLVVFGGVRGR 1734
P RWG TATM+S ++V GG++DDE+ TL DL+ FD + WS P+NC+SIPR WHSA F++ KNLL++FGGER V+G E L D+MVLDT +L YPPA+SG P ARSGHS+ ++G D+VVFGG RGR
Sbjct: 218 PSQRWGCTATMVSNQRIVVYGGESDDES---TLSDLFVFDMVKQEWSCPMNCESIPRTWHSAVFLEQKNLLLVFGGERVVNGGHETLSDVMVLDTGACILFVNPLIATVECFLWYPPAVSGTPPMARSGHSSVVLGNDVVVFGGTRGR 362
BLAST of mRNA_E_fasciculatus_S2_contig7270.15465.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMW8_GLOUD) HSP 1 Score: 162 bits (409), Expect = 3.270e-39 Identity = 77/138 (55.80%), Postives = 100/138 (72.46%), Query Frame = 1
Query: 1324 GVGPMGRWGHTATMISESTMMVLGGQADDEAHQATLGDLYKFDFATESWSRPVNCDSIPRAWHSASFIKDKNLLVIFGGERTVDGCP-ECLDDIMVLDTDIDLLYPPAISGKSPTARSGHSAAIIGTDLVVFGGVRGR 1734
G P RWG + T IS++ ++V GG DDEA TLGDL+ +D + WSRP+NC+SIPRAWH A F++ KNLL++FGGER + G + L DIMVLDT+ L YPPA+SG +P ARSGH+ ++G D+VVFGG RGR
Sbjct: 269 GTVPAERWGDSVTKISDNRVVVYGGADDDEA---TLGDLHVYDLKRQEWSRPLNCESIPRAWHDAVFLESKNLLLVFGGERFMGGDQLDVLSDIMVLDTECFLWYPPAVSGVTPMARSGHTCTVVGNDIVVFGGSRGR 403
BLAST of mRNA_E_fasciculatus_S2_contig7270.15465.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YLM7_9STRA) HSP 1 Score: 160 bits (404), Expect = 8.410e-39 Identity = 77/138 (55.80%), Postives = 100/138 (72.46%), Query Frame = 1
Query: 1324 GVGPMGRWGHTATMISESTMMVLGGQADDEAHQATLGDLYKFDFATESWSRPVNCDSIPRAWHSASFIKDKNLLVIFGGERTV-DGCPECLDDIMVLDTDIDLLYPPAISGKSPTARSGHSAAIIGTDLVVFGGVRGR 1734
GV P G WG +AT IS ++V GG DDEA TLGD++ FD T WS+P+NC+SIPRAWH A +++ K+LL++ GGER + DG + L DIMVLDT+ L YPPA+SG P+ARSGH+ ++G D+VVFGG RGR
Sbjct: 216 GVVPAGHWGDSATKISGDRVVVYGGADDDEA---TLGDVHVFDLKTREWSKPLNCESIPRAWHDAVYLEAKHLLLVIGGERFMGDGQIDVLSDIMVLDTECFLWYPPAVSGTMPSARSGHTCTVVGDDVVVFGGSRGR 350
BLAST of mRNA_E_fasciculatus_S2_contig7270.15465.1 vs.
Match: Kelch (repeat-containing proteins n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKH7_PLAHL) HSP 1 Score: 158 bits (400), Expect = 2.180e-38 Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 1
Query: 1333 PMGRWGHTATMISESTMMVLGGQADDEAHQATLGDLYKFDFATESWSRPVNCDSIPRAWHSASFIKDKNLLVIFGGER--TVDGCPECLDDIMVLDTDIDLLYPPAISGKSPTARSGHSAAIIGTDLVVFGGVRGR 1734
P+ RWGHTAT IS+ ++V GG DDE TLGDL+ FD T W+ P+NC++I R WH A F+ KNL+++FGGER T +G + L DIMVLDT+ L YPPAI G P+ARSGH+ +IG ++VVFGG RGR
Sbjct: 210 PLERWGHTATKISDERVVVYGGTDDDER---TLGDLHIFDMKTHRWTTPINCETIARTWHDAVFLSSKNLVLVFGGERSATAEGEFDILSDIMVLDTECFLWYPPAIQGSPPSARSGHTCTVIGNEVVVFGGSRGR 342
BLAST of mRNA_E_fasciculatus_S2_contig7270.15465.1 vs.
Match: Uncharacterized (protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XY47_9STRA) HSP 1 Score: 159 bits (401), Expect = 3.600e-38 Identity = 78/136 (57.35%), Postives = 96/136 (70.59%), Query Frame = 1
Query: 1333 PMGRWGHTATMISESTMMVLGGQADDEAHQATLGDLYKFDFATESWSRPVNCDSIPRAWHSASFIKDKNLLVIFGGERTVD--GCPECLDDIMVLDTDIDLLYPPAISGKSPTARSGHSAAIIGTDLVVFGGVRGR 1734
P RWGHTAT ISE ++V GG ADDE + TLGDL+ FD T W+ P+NCD+IPR WH ++ K+LL++FGGER D G + L DIMVLDT+ L YPPAI G +P ARSGH+ +IG D+VVFGG RGR
Sbjct: 255 PPERWGHTATKISEERVVVYGG-ADDE--ERTLGDLHLFDLKTRRWTAPINCDTIPRTWHDTVYLDSKHLLLVFGGERYADDDGKFDILSDIMVLDTECFLWYPPAIRGTAPAARSGHTCTVIGNDVVVFGGSRGR 387 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7270.15465.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7270.15465.1 >prot_E_fasciculatus_S2_contig7270.15465.1 ID=prot_E_fasciculatus_S2_contig7270.15465.1|Name=mRNA_E_fasciculatus_S2_contig7270.15465.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=578bp MVSGVTQQHRACGGGGGGGSSIAAAAVDSGGGGPSIRFEGITLELSSFSGback to top mRNA from alignment at E_fasciculatus_S2_contig7270:3610..7541+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7270.15465.1 ID=mRNA_E_fasciculatus_S2_contig7270.15465.1|Name=mRNA_E_fasciculatus_S2_contig7270.15465.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3932bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7270:3610..7541+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7270:3610..7541+ >mRNA_E_fasciculatus_S2_contig7270.15465.1 ID=mRNA_E_fasciculatus_S2_contig7270.15465.1|Name=mRNA_E_fasciculatus_S2_contig7270.15465.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1734bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7270:3610..7541+ (Ectocarpus fasciculatus EfasUO2)back to top |