mRNA_E_fasciculatus_S2_contig7250.15444.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7250.15444.1
Unique NamemRNA_E_fasciculatus_S2_contig7250.15444.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7250.15444.1 vs.
Match: GDP-L-fucose (synthase n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A2I6RJN1_SACJA)

HSP 1 Score: 574 bits (1480), Expect = 3.770e-201
Identity = 270/291 (92.78%), Postives = 284/291 (97.59%), Query Frame = 1 
Query:    1 QAQKNEEYIFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVDKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKGQYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPEFKFTSMQDGIKAACDWFCENYETARK 873
            +A++ EEYIFLSSKDGD+R+ME TK IFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCRIYKV+KLVSCLSTCIFPDKTTYPIDETMVHNGPPH SNEGYAYAKRMIDVLNRCYK +YGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAM+FEGNVVFDTDKSDGQFKKTACNDLLK+KNP+FKFT M++G+K AC+WFCENYETARK
Sbjct:   37 EAKEKEEYIFLSSKDGDIRNMEETKLIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMDFEGNVVFDTDKSDGQFKKTACNDLLKQKNPDFKFTPMKEGLKQACEWFCENYETARK 327
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7250.15444.1 vs.
Match: GDP-L-fucose (synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C923_9STRA)

HSP 1 Score: 459 bits (1181), Expect = 5.210e-156
Identity = 215/289 (74.39%), Postives = 244/289 (84.43%), Query Frame = 1 
Query:    4 AQKNEEYIFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVDKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKGQYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPEFKFTSMQDGIKAACDWFCENYETAR 870
            AQ  EEYIFLSSKDG+L +M   +AIFEK+ PTHVIHLAA+VGGLF+NLKYKVEF+REN+LINDNVMECCRIYKV KLVSCLSTC+FPDKTTYPIDETMVH GPPH+SNEGYAYAKRMIDV+NRCY+ +YGCNFTSVIPTNIYGK DNFSID GHV+PGLIHKC+ A++ G    +WG+GSPLRQFIYNVDLGALM+W +R+Y  VDPIILSVGEEDEVSIADAA+M+A  M + G VVFDT K+DGQFKKTA N  L+   P+FKFT M  G+   C WF  N   AR
Sbjct:   23 AQAEEEYIFLSSKDGNLLNMAECRAIFEKHAPTHVIHLAAKVGGLFNNLKYKVEFYRENMLINDNVMECCRIYKVQKLVSCLSTCVFPDKTTYPIDETMVHAGPPHSSNEGYAYAKRMIDVMNRCYRDEYGCNFTSVIPTNIYGKHDNFSIDGGHVIPGLIHKCFLAEKNGTPFTIWGSGSPLRQFIYNVDLGALMVWVLRSYDSVDPIILSVGEEDEVSIADAARMVAKGMAYSGEVVFDTTKADGQFKKTASNARLRALRPDFKFTPMAQGLAETCAWFKANSAVAR 311
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7250.15444.1 vs.
Match: GDP-L-fucose (synthase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4T7_9STRA)

HSP 1 Score: 449 bits (1154), Expect = 7.820e-152
Identity = 206/289 (71.28%), Postives = 241/289 (83.39%), Query Frame = 1 
Query:    7 QKNEEYIFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVDKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKGQYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPEFKFTSMQDGIKAACDWFCENYETARK 873
            Q+ E + + SS D DLRD EST+ +FE+ KPTHVIHLAA VGGLF NLKYKVEF+REN+LINDNVMEC R + V KLVSCLSTCIFPDKTTYPIDETMVH+GPPH+SN GYAYAKRMIDV+N+CY  +YGCN+TS+IPTNIYG  DNF I++GHV+PGLIHKCYKAK+ G DL +WGTGSPLRQFIY+ DL  L +W MR YH  +PIILSVGEEDEVSIAD A+ +A AM FEGN+VFDT KSDGQ+KKTA N  L++  P+F+FT +  G++ ACDWF  NYETARK
Sbjct:   31 QEGETWFYASSSDADLRDRESTRKLFERVKPTHVIHLAAMVGGLFKNLKYKVEFYRENVLINDNVMECSREFNVVKLVSCLSTCIFPDKTTYPIDETMVHDGPPHSSNAGYAYAKRMIDVVNKCYNEEYGCNYTSIIPTNIYGPHDNFGIEDGHVIPGLIHKCYKAKRDGTDLTIWGTGSPLRQFIYSEDLARLTVWVMREYHSPEPIILSVGEEDEVSIADVARAVAKAMKFEGNIVFDTTKSDGQYKKTASNKKLRELYPDFEFTPIDQGLQQACDWFVANYETARK 319
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7250.15444.1 vs.
Match: GDP-L-fucose (synthase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7DWV8_9STRA)

HSP 1 Score: 448 bits (1153), Expect = 8.570e-151
Identity = 207/292 (70.89%), Postives = 247/292 (84.59%), Query Frame = 1 
Query:    1 QAQKNEEYIFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVDKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKGQYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFE-GNVVFDTDKSDGQFKKTACNDLLKKKNPEFKFTSMQDGIKAACDWFCENYETARK 873
            +A  NEE++FLSSKDGDL+    T+AIF +YKPTHVIHLAA+VGGLF+N K+KVEF+R+NI+INDNVMECCRI+ V KLVSCLSTCIFPDKTTYPIDETMVH+GPPH SNEGYAYAKRMIDVLNRCY  +YGCN TS+IPTNIYG  DNF+I+NGHV+PGLIHK + AKQ+GEDLH+WG+G+PLRQFI++ DL AL +WT+R+YH+ +PIILSVGEE+EVSI D A M+A A       VVFDTDKSDGQFKKTACN  L+K  P +KF  +++GI+ + DWF  NYE ARK
Sbjct:   89 EAAANEEWVFLSSKDGDLKSRTDTEAIFRRYKPTHVIHLAAKVGGLFANQKFKVEFYRDNIIINDNVMECCRIFGVRKLVSCLSTCIFPDKTTYPIDETMVHDGPPHKSNEGYAYAKRMIDVLNRCYSDEYGCNMTSIIPTNIYGPHDNFNIENGHVIPGLIHKAFLAKQSGEDLHIWGSGTPLRQFIFSQDLAALTVWTLRDYHDPEPIILSVGEEEEVSIKDVALMVAEASGLPLERVVFDTDKSDGQFKKTACNKKLRKLQPSYKFKPIKEGIQESVDWFFANYEAARK 380
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7250.15444.1 vs.
Match: GDP-L-fucose (synthase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAF3_9STRA)

HSP 1 Score: 441 bits (1135), Expect = 5.620e-149
Identity = 205/289 (70.93%), Postives = 239/289 (82.70%), Query Frame = 1 
Query:    7 QKNEEYIFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVDKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKGQYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPEFKFTSMQDGIKAACDWFCENYETARK 873
            +K+  ++FLSSKDGDLRD ++T+AIFE+ +PTHVIHLAA VGGLF+N+  KVEF+REN+L+NDNVMECCRIYKV KLVSCLSTCIFPDKTTYPIDETM+H+G PH SNEGYAYAKRMIDV+NRCYK +YGCNFTSVIPTNIYG  DN+SI  GHV+PGLIHKCY AK+ G    VWGTGSPLRQFIY+ DL AL +W +R+Y   DPIILSV EE EV+I D A MI  AM F+G V F TDK+DGQ+KKTA N+ L    P+F+FT M +G+K ACDWFC NYET RK
Sbjct:   33 EKDATWVFLSSKDGDLRDRKATEAIFERVRPTHVIHLAAMVGGLFANMSKKVEFYRENMLMNDNVMECCRIYKVQKLVSCLSTCIFPDKTTYPIDETMIHDGAPHLSNEGYAYAKRMIDVMNRCYKDEYGCNFTSVIPTNIYGPHDNYSIQGGHVVPGLIHKCYLAKKNGTPFEVWGTGSPLRQFIYSGDLAALTVWVLRSYDSTDPIILSVPEEKEVTIKDVALMIRDAMEFKGEVKFLTDKADGQYKKTASNEKLAGLRPDFQFTPMAEGLKKACDWFCANYETCRK 321
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7250.15444.1 vs.
Match: GDP-L-fucose (synthase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EWI6_9STRA)

HSP 1 Score: 441 bits (1133), Expect = 1.440e-148
Identity = 202/286 (70.63%), Postives = 237/286 (82.87%), Query Frame = 1 
Query:   16 EEYIFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVDKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKGQYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPEFKFTSMQDGIKAACDWFCENYETARK 873
            E +IFLSSKDGDLRD ++T+A+FEK+KPTHVIHLAA+VGGLF+N+  KVEF+RENIL+NDN+MEC RIYKV KLV  LSTCIFPDKTTYPIDETM+HNGPPH SNEGYAYAKRMID +NR Y  +Y CNFTS+IPTNIYGK DNFSI+ GHV+PGLIHKCYKAKQ G    +WG+G+PLRQF+Y+ DL  L +W  R Y+E DPIILSV E+DEV+I D A  +A A NFEG + FDT KSDGQ+KKTACN  L+K  P++KFTSM DGI+ + DWF  NYET RK
Sbjct:   43 ETWIFLSSKDGDLRDRKATEAVFEKFKPTHVIHLAAKVGGLFANMAEKVEFYRENILMNDNIMECSRIYKVQKLVGMLSTCIFPDKTTYPIDETMIHNGPPHHSNEGYAYAKRMIDTMNRAYNEEYNCNFTSIIPTNIYGKSDNFSIETGHVIPGLIHKCYKAKQDGTPFCIWGSGTPLRQFVYSRDLAELTVWVTREYNEADPIILSVDEDDEVTIKDVALAVAKAHNFEGKIEFDTSKSDGQYKKTACNMKLRKYRPDYKFTSMPDGIQKSVDWFVANYETCRK 328
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7250.15444.1 vs.
Match: GDP-L-fucose (synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA35_AURAN)

HSP 1 Score: 439 bits (1129), Expect = 4.370e-148
Identity = 202/284 (71.13%), Postives = 239/284 (84.15%), Query Frame = 1 
Query:   22 YIFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVDKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKGQYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPEFKFTSMQDGIKAACDWFCENYETARK 873
            ++FLSSKDGDLRD   T+AIFE+ KPTHV+HLAA VGGLF+N+  KVEF+REN+L+NDNVMECCRIYKV+KLVSCLSTCIFPDKT+YPIDE+MVH+G PH+SNEGYAYAKRMI+V+NRCY  +YGC FT+VIPTNIYG  DNFS++ GHV+PGLIHKCY AK+ G    VWG+G+PLRQFIY+VDL AL +W MR+Y   D IILSVGEEDEVSI D A MI  AM FEG V+FDTDK+DGQ+KKTA ND LK   P+FKFT M++G++ A DWF  NY+T RK
Sbjct:   37 WVFLSSKDGDLRDRAQTEAIFERVKPTHVVHLAAMVGGLFANMAKKVEFYRENMLMNDNVMECCRIYKVEKLVSCLSTCIFPDKTSYPIDESMVHDGAPHSSNEGYAYAKRMIEVMNRCYAEEYGCKFTAVIPTNIYGPHDNFSVNGGHVVPGLIHKCYVAKRDGTPFTVWGSGTPLRQFIYSVDLAALTVWVMRSYDSADSIILSVGEEDEVSIKDVALMIRDAMKFEGEVIFDTDKADGQYKKTASNDKLKGLRPDFKFTPMREGLQKAVDWFVANYDTCRK 320
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7250.15444.1 vs.
Match: GDP-L-fucose (synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFU3_THAPS)

HSP 1 Score: 439 bits (1128), Expect = 7.140e-148
Identity = 203/287 (70.73%), Postives = 238/287 (82.93%), Query Frame = 1 
Query:   13 NEEYIFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVDKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKGQYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPEFKFTSMQDGIKAACDWFCENYETARK 873
            NE +IFLSSKDGDLRD + T AIF++ KPTHVIHLAA+VGGLF+N+K KVEF+REN LINDN+ME CRI+ V KLVS LSTCIFPDKTTYPIDETM+H+GPPH SNEGYAYAKR+ID +NR Y  +YGCNFTS+IPTNIYG  DNFSI+NGHV+PGLIHKCYKAK+ G D  +WG+G+PLRQFIY+ DL  L +W MR+YH  DPI LSV E  EV+I D A  +A AM FEG VVFDT K+DGQFKKTACN  L+   P+++FTSM+DGI+ + DWF ENYETARK
Sbjct:   38 NETWIFLSSKDGDLRDRKETDAIFDRVKPTHVIHLAAKVGGLFANMKQKVEFYRENTLINDNIMENCRIHNVTKLVSMLSTCIFPDKTTYPIDETMLHDGPPHPSNEGYAYAKRLIDTMNRAYAEEYGCNFTSIIPTNIYGPNDNFSIENGHVIPGLIHKCYKAKKDGTDFTIWGSGTPLRQFIYSGDLAELTVWVMRDYHSPDPITLSVDESAEVAIKDVAYAVAKAMKFEGKVVFDTSKADGQFKKTACNKKLRGLRPDYQFTSMEDGIQKSVDWFLENYETARK 324
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7250.15444.1 vs.
Match: GDP-L-fucose (synthase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UTT3_9STRA)

HSP 1 Score: 438 bits (1126), Expect = 1.330e-147
Identity = 201/290 (69.31%), Postives = 240/290 (82.76%), Query Frame = 1 
Query:    4 AQKNEEYIFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVDKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKGQYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPEFKFTSMQDGIKAACDWFCENYETARK 873
            A++NEE+++LSSKDGDLRD +ST+AIFEKYKPTHVIHLAA+VGGLF+N+  KVEFFRENILINDN+MEC RIYKV+KLVS LSTCIFPDKT+YPIDETM+H+GPPH SNEGYAYAKR+ID +NR Y  +Y CNFTS++PTNIYG  DNFSI NGHV+PGLIHKCY AK+      +WG+G+PLRQFIY+VDL  L +W MR YH  DPI LSV E  EV I D A  +A AM F+G ++FDT K+DGQFKKTA N  L+K  P++KFTSM+DGI+ + DWF  NY+TARK
Sbjct:   33 AKENEEWVYLSSKDGDLRDRKSTEAIFEKYKPTHVIHLAAKVGGLFANMAQKVEFFRENILINDNIMECSRIYKVEKLVSMLSTCIFPDKTSYPIDETMLHDGPPHPSNEGYAYAKRLIDTMNRAYAEEYNCNFTSIVPTNIYGPHDNFSIQNGHVIPGLIHKCYLAKKNNTPFTIWGSGTPLRQFIYSVDLAELTVWVMREYHSPDPITLSVDEAAEVPIKDVALAVAKAMKFDGEIIFDTSKADGQFKKTASNLKLRKHRPDYKFTSMEDGIQKSVDWFLANYDTARK 322
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7250.15444.1 vs.
Match: GDP-L-fucose (synthase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BQ17_9DINO)

HSP 1 Score: 436 bits (1121), Expect = 4.960e-147
Identity = 204/291 (70.10%), Postives = 238/291 (81.79%), Query Frame = 1 
Query:    1 QAQKNEEYIFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVDKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKGQYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPEFKFTSMQDGIKAACDWFCENYETARK 873
            + ++ E++IFLSSKDGDLRD ++T+AIFEKYKPTHVIHLAA VGGLF NLKYKVEF+R N L+NDN+MEC R +KV+KLVSCLSTCIFPDKTTYPIDETMVHNGPPH+SNEGYAYAKRMID +NRCY  +YGC FTS+IPTNIYG  DNFSI++GHV+PGLIHKCY A++ G    +WG+G+PLRQFIY++DL  L  W MR Y EV+PIILSV EE EVSI D A  +A +M     V FDT KSDGQFKKTA N  L+K  P+FKFTS+ DGIK  C WF ENY+ ARK
Sbjct:   20 EPREGEKWIFLSSKDGDLRDPKATEAIFEKYKPTHVIHLAAFVGGLFRNLKYKVEFYRYNTLMNDNIMECARKFKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNEGYAYAKRMIDTMNRCYNEEYGCKFTSIIPTNIYGPHDNFSIEDGHVIPGLIHKCYNAERDGTPFTIWGSGTPLRQFIYSLDLARLTAWVMREYEEVEPIILSVDEEAEVSIKDVALKVAESMGLTSEVQFDTSKSDGQFKKTASNKKLRKYLPDFKFTSIDDGIKETCKWFKENYDIARK 310
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7250.15444.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
GDP-L-fucose3.770e-20192.78synthase n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A... [more]
GDP-L-fucose5.210e-15674.39synthase n=1 Tax=Tribonema minus TaxID=303371 RepI... [more]
GDP-L-fucose7.820e-15271.28synthase n=2 Tax=Spumella elongata TaxID=89044 Rep... [more]
GDP-L-fucose8.570e-15170.89synthase n=1 Tax=Florenciella parvula TaxID=236787... [more]
GDP-L-fucose5.620e-14970.93synthase n=2 Tax=Pelagomonas calceolata TaxID=3567... [more]
GDP-L-fucose1.440e-14870.63synthase n=1 Tax=Fragilariopsis cylindrus CCMP1102... [more]
GDP-L-fucose4.370e-14871.13synthase n=1 Tax=Aureococcus anophagefferens TaxID... [more]
GDP-L-fucose7.140e-14870.73synthase n=1 Tax=Thalassiosira pseudonana TaxID=35... [more]
GDP-L-fucose1.330e-14769.31synthase n=1 Tax=Grammatophora oceanica TaxID=2104... [more]
GDP-L-fucose4.960e-14770.10synthase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7250contigE_fasciculatus_S2_contig7250:1622..7649 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score568.9
Seed ortholog evalue1.2e-159
Seed eggNOG ortholog2880.D7FW27
Preferred nameTSTA3
Model size1826
KEGG rclassRC01014
KEGG koko:K02377,ko:K12812
KEGG ReactionR05692
KEGG Pathwayko00051,ko00520,ko01100,ko03013,ko03015,ko03040,ko05164,map00051,map00520,map01100,map03013,map03015,map03040,map05164
KEGG ModuleM00406,M00430
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0006139,GO:0006403,GO:0006725,GO:0006793,GO:0006807,GO:0006810,GO:0007155,GO:0007159,GO:0008150,GO:0008152,GO:0009055,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0015931,GO:0016491,GO:0016614,GO:0016616,GO:0016853,GO:0016854,GO:0016857,GO:0018130,GO:0019438,GO:0019673,GO:0019835,GO:0022610,GO:0022900,GO:0033036,GO:0033227,GO:0034641,GO:0034654,GO:0042350,GO:0042351,GO:0042356,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046368,GO:0046483,GO:0047918,GO:0050577,GO:0050657,GO:0050658,GO:0051179,GO:0051234,GO:0051236,GO:0055086,GO:0055114,GO:0071702,GO:0071704,GO:0071705,GO:0098609,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901576
Exons7
EggNOG free text desc.GDP-L-fucose synthase activity
EggNOG OGsCOG0451@1,KOG1431@2759
EC1.1.1.271,3.6.4.13
Cds size816
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7250.15444.1prot_E_fasciculatus_S2_contig7250.15444.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7250 2572..7589 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842389.6295388-UTR-E_fasciculatus_S2_contig7250:1621..25711696842389.6295388-UTR-E_fasciculatus_S2_contig7250:1621..2571Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7250 1622..2571 -
1696842389.7098384-UTR-E_fasciculatus_S2_contig7250:7589..76491696842389.7098384-UTR-E_fasciculatus_S2_contig7250:7589..7649Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7250 7590..7649 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842389.6410084-CDS-E_fasciculatus_S2_contig7250:2571..26161696842389.6410084-CDS-E_fasciculatus_S2_contig7250:2571..2616Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7250 2572..2616 -
1696842389.6514862-CDS-E_fasciculatus_S2_contig7250:3013..31091696842389.6514862-CDS-E_fasciculatus_S2_contig7250:3013..3109Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7250 3014..3109 -
1696842389.660685-CDS-E_fasciculatus_S2_contig7250:3953..40971696842389.660685-CDS-E_fasciculatus_S2_contig7250:3953..4097Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7250 3954..4097 -
1696842389.6699553-CDS-E_fasciculatus_S2_contig7250:4678..47591696842389.6699553-CDS-E_fasciculatus_S2_contig7250:4678..4759Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7250 4679..4759 -
1696842389.6823723-CDS-E_fasciculatus_S2_contig7250:5184..53101696842389.6823723-CDS-E_fasciculatus_S2_contig7250:5184..5310Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7250 5185..5310 -
1696842389.6917677-CDS-E_fasciculatus_S2_contig7250:5770..60281696842389.6917677-CDS-E_fasciculatus_S2_contig7250:5770..6028Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7250 5771..6028 -
1696842389.7008972-CDS-E_fasciculatus_S2_contig7250:7523..75891696842389.7008972-CDS-E_fasciculatus_S2_contig7250:7523..7589Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7250 7524..7589 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7250.15444.1

>prot_E_fasciculatus_S2_contig7250.15444.1 ID=prot_E_fasciculatus_S2_contig7250.15444.1|Name=mRNA_E_fasciculatus_S2_contig7250.15444.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=272bp
MESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMEC
CRIYKVDKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMI
DVLNRCYKGQYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQ
AGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEV
SIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPEFKFTS
MQDGIKAACDWFCENYETARK*
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mRNA from alignment at E_fasciculatus_S2_contig7250:1622..7649-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7250.15444.1 ID=mRNA_E_fasciculatus_S2_contig7250.15444.1|Name=mRNA_E_fasciculatus_S2_contig7250.15444.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6028bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7250:1622..7649- (Ectocarpus fasciculatus EfasUO2)
CAGGCCCAGAAGAACGAAGAGTACATCTTCCTCAGCAGCAAGGATGGCGA
CTTGCGGGACATGGAGTCCACCAAGGCTATCTTCGAGAAGTACAAGCCGA
CCCACGTCATCCACCTCGCCGCGAGGGTGAGTGTGATGACGAGTGTACTT
CGAAGTAGTACAGTACACAAGAGGAGGAGTGAGTTCGCTCCTTACTCCGT
ACACGATAACTCCCCGCAAAAGCAAAGAGGACTATCCCAGACTATGAAGT
AGTGGGGGAGATGAATAATTTGTTGCGTCATGGACTTACGGAAAGAAAAA
ATGACTCACGCAGGTTTCTCTGATAGAGATGGACTCGTTGTGTTATATTA
GGAAAAATAGAATAAAATAAAACAATTCATGGCTCCCGCACAGCAAAATC
AAGAAATATGAACAAGTGCAGAGGAGAGAGACGACTTTGCCGGGTGGGTT
CAAACGAAAATTCGTCGTGCCAATCTTAGTCTTGGATTGGACGTGGAGAC
TTCCCGCTCCCTCCCTTCTCGGAGAGCAATTGAGGCGTGACTATTACTAT
TTCGAAATGCAGTGGGGGGGGCTGCTTATCGCCGGCATGTACATGTATAC
GCCCAGAGAATTGACCGGCACTATCTATACTGGACACCGGCACTATACCG
GGCACCTGCACTAGACAGGGCCCCACTGCTCGTGTCGCAAAAGTTCCGAA
CAGTTTCCTGGCGCCAGACGACGGTCGGAGTCAATTTTCGTGGTATGCAT
ATGTTGATTGAAATCCGTGGCAAGAGCCAAGCTGTTAATAGTCTGACCCC
ATATCACCGCCGGTGCCAGCGGTTTTATGGATAGATAGGGTCGCTCTCTA
GGTTCTTTCCGCGGACGTGGTCGATCAGAAAAAGCGCCGCGGAGCCGCGC
GCTATTACGGGGCGTTTCTACAACACGGCAAGGGTGCGGACGAAAGGAGG
GGTTCAAAACTGACCGAAGCGGTTGTATGTGTGATGTGTGTGGATAGCCA
GCCCACAAAGCTGTTAAGCCACCCAACACAAGCTGCTGGGTGGTGGCGTC
AATGTTTCCTTCTACAATTAACACACGTCGACAGCTCCGCCACTACTGGA
TGGGGGTTGCTTGGACAATCACGACGTCGGGGATTCAGCTGCTGGAAAAT
CCAAAATCCGCTCCCTTTCGGCCTGAACCAACCAGAGGCCATCCACCCCA
CAAGCTGTAGGACATGCAAGGGGTGGCGCAAAAGGAGCCTTATGCTTAGT
GTCGGGGAGGATCGCACTATGCTGCGAGACAAAAGCTGTTGCAGTGTAGG
TGGTTGCTCAAACAATCGTCGCGGGGAAGTTCGGTCGTTGAATGTACCTG
CTGAAAACACCTTCCATCATTTGGGGCATACTGTGTATCATGACACAAGT
CGTCTCCTGGCCAACCACAATAGAGGCGAAAGACCCGCTCATCCCTGTTG
TTTATTGTTCGGCAGTGAGTGCACAACGACTGTGAGACCCTCCCTTTTAC
ATGTCACATCGTAGGGCAGGCAGGCAGGCAGCATGGTAATCTTCATCGCG
AAAAATCTCTTCCGCTTGATACACGTTTCTCTTCCGCTGTTCCACCCCCC
GCTGAAACAAAACGAATACAGGTGGGGGGATTGTTCAGCAACCTCAAGTA
CAAGGTGGAGTTCTTCCGCGAGAACATCCTCATCAACGACAACGTGATGG
AGTGCTGCAGGATCTACAAGGTGGACAAGCTGGTGTCCTGCCTGTCGACG
TGCATCTTCCCCGACAAGACCACCTACCCCATCGACGAGACCATGGTGCA
CAACGGCCCGCCGCACACCAGCAACGAAGGGTACGCGTACGCGAAGCGCA
TGATCGACGTGCTCAACCGCTGCTACAAGGTATGTACTGCTGTACTGCTG
TATCGTGACGACTCCCTCTTCCTCGCCTACTCTCTTGTCTTGTTGCCTGT
CTTTTTTTTTTCGTCTCTTGGGCGCGGTTGTTGATGTTGCATTTCCTTTC
CTGGTGAGGGCGTTCGAGCGTACACTGGATTGCGCACTGGAGAGGCGGGG
ACTGGCCCGAAGAAAAACAGGGTCCGCGCCCTGTTTTTTCTCTGGCATCG
CGCTGAGTTGCGTGCTTTGAAGGATAGGATGCTAGAACGTGCGGAGGGGC
TAGCGTTCGTGTTCGGCAGGGAAGTCGGAGTCTTTTGTCGCCCTGGGCTT
CCGTCGTAGCGGGCGTATCTCAAGGCATCTCAAGGCGCCTTGGATGCCAC
CAGCTCGTTACACTGCTGCTGCCACTTACCTCTGCTACTGCCTCTCGTTG
TGGACGTGCCGCGATTTTTGGCACTCTCGCTCTCTGCAGGGCCAGTACGG
CTGCAACTTCACATCGGTGATCCCCACCAACATCTACGGCAAGGGGGACA
ACTTCTCCATCGACAACGGACACGTGCTCCCGGGGCTCATCCACAAGTGC
TACAAGGCGAAGCAGGTTAGCTCAGCTACTGCTGTAGTGGTGGCCGCTGC
TGCTGCAACGTTATTGGTTGTTGAAGTCTGGCGTGGTGACGTGTTGAAAC
CGCTGGTGGAGGCCGAACTTGCGCGTTGAGGGCATGCCTGCCCGAGCATG
CTTCATACGTACGGTGCCTCTGTTATGCGGGACATTTTTTCCGGTTTATG
CTGCTGGGAGATGCGGACCGATCTCGCGTGTGTGGCCGCTTTCCTCCACC
TCATTTCTGTAAATAGTTGGGGCTGGAAACAGAACCTGGTTTTTGTGTGT
GCTTCAAGACTCGTTACATGCTGACACACTATTATACCCACAACGTATAA
GGCTATGCCAGAGTCGATGTCGAGGTGACCCCCTGACTCGTAACCCATGT
CTGCTGTTGCGGTGTTTGTTTGGCCTCTCTTTGAGCTCAGGCGGGCGAGG
ACTTGCACGTTTGGGGCACCGGGAGCCCGCTCCGCCAATTCATCTACAAC
GTCGACCTCGGCGCCCTGATGGTGAGAGGCTAGCGTGGTGTTGATTATTC
CTGTGTGTGTTGGTGTTGCCCCTGAGTGCTGAAACTTGAGAGTATTTGAT
GAGGGTAATGTGGAATATTCCTGTTCGTGTTGCCCCTGATTACTGAAACT
TGCTTGGTTTTGTAACCTAGTCTTCTACGCGCGTGACTGGGACGTACGAT
TTTTCCGGAGTGATGAATGGTGTCGGACCAATTCTGCGGTGGTGTTGTGG
GGTCCTTCTCCGCGACGCCTTGTTCGCCGTTTCTTCACAATTCCCCGAGA
CACTCAAGAGGTTTTTAGCTCCCGTGTCTGTAACGGATGACTAGCTGACG
ACAGGCAGACACTCAATCCACGATTGACACGTCACTTATTTAGAACGTTG
TGATCACCGTGCCGTCATTTCTCCGCGAGTTTGTGTGGACCAATGAGGCG
TGTGCCTGCTTCGGTGCGCCGGGTGCTTCGGAAAAGCCGAACAACAAAAC
GCAGCGTACTATGCGTACAAGTGTGTACCAAGCTGCTGTAGTCTATCGAT
CCTGACGCTCGCGCGGCTTGCTTGCTTGCTCCCTCTGTCTTCGCGAGGTC
AGATCTGGACGATGCGCAACTACCACGAGGTAGATCCGATCATCCTGTCT
GTCGGGGAGGAGGACGAAGTGTCCATTGCGGACGCGGCGAAGATGATCGC
GAGCGCGATGAACTTCGAAGGGAACGTTGTCTTCGACACCGACAAGGTGA
CTTCCTTGACTTGCATGTACTATGCATACCGTTTTTCATGTCTACGACAG
CTACCTGGAGACGATGTTTATTTGCACGTCTACGACAGACGATCTACCCG
GAGACAAATCTTTACCGTTGTCGTTCATGTGCATACACCTACCTTGTGCT
TGGTTCGATCGTTGCTGTGACGAGCTCGTAGAGAGAAAGTCGCTGGTGTT
TCGGACATGTCATTTGAAGACGAACCTCAAAGTCGAAGAACGTTCCCGTA
CTCGCAGAGGGGGGCTTGCCGAAAGAGATGCACCTAAATACTGGCGTTTT
TTACGGGAATACGGCTCGCAGTCGTCAAGGTACGCTCGTTCGTTATGCTG
ACGTGTCATTCCTGAAAGCCTTCATACCTTCCGGCTTCCTTGGTGTGTTG
ACGTATGCGGTAGAAGCCCTCTGGCTCACGTGGGAACGTTTGGCAGTTTT
AGAAACTTGGTCTGTCTTGATTATTGCGTTAGTTAACCCCTCGCGTGTCC
CACACCTCTGAAACCCGGGCCAGGCGATTTTTTTGCTGTTTGGTTTGATT
GGTTTGTAAGCGTGGTGTCGATCTTACCTCTCCTCACCAGCGTCTCGGCC
CAGCACTTTGCGCTTCCCTCAGAAGGCGGCGAGTCGGGTTACGTTCGCTC
TCGAATTTCTCCGTCTCGTGGTTTGCGTGCCCCCCCGCCCCCACCCCCGC
CCGTCGCAAATAGTCTGTCTATCCCCGATCCCCAACTCTTAATCCTTGCT
GCGTTTCCCTTCCTGGTCCTGGTCGGGTTTTTTTCGTGGTAAAATCTCAT
GCCTTGCCTCGCTGTGGTTGCCCTGTTTTCGTTTTCCCAGTCGGACGGAC
AGTTCAAGAAGACGGCGTGCAACGACCTCCTTAAGAAGAAGAACCCTGAG
TTCAAGTTCACATCCATGCAGGACGGGATCAAGGCGGTGAGTAACCCCCC
CCAATGGTACTGGAACATGATGATGCAACACATCGAAAACTGTCCTTGGC
AGTCGCCAACGATATGGACTCTCGTGGGGAATCTCGTGCGAGTGTGTCGG
GGCTCCTTTTGTGATAGAATCTCTTGCGTGCATGTACTGCTGTATGATGA
GTCGGCAGAGGTACAAGAGCAATGTCGCGCTTGCGTAGCTCACGCGCATA
GTCCTGAAGGAGGCTTACCTAGGTGCGATCCATCGCGCATGATCGTCGTC
CCTCGATGTGGCCGGCAAAATCTGCACTCATTTTCATGCTATGCCCGCGA
CACACCGCTCATGTTGCCTCCCCCTCCCCCCCACTGCTCTGGCCGTCTGC
GTGTACGTTCACATCGCGCGTTACCATTCACAGGCGTGCGACTGGTTCTG
CGAGAACTACGAGACTGCTCGCAAGTAGGAAAGAAAACATTTTTGGGAGA
CAGGCTTGGTGGTGTTTGCTCGTATTCGGCATACCATATATGTTGATGTG
ACGCGCTTTGGAGGGTGTTCCGGAAGGGGTACATGCTGTACTTGCGTTGT
CCCGTACGGTACGTGTTTGGCCGGCCGTCTGTTGACGGGTCGGTCCTGCA
CACTTGTAAATTTAGTGTGTACGTTCGGGAACAGGGTGTGTGAAAAATGG
CAAGAAGCTGTTGGCGTTGGCGGGTGTGGCTCGGCGACTGCCCTTTCAGC
CGTTGTCCTGTTGCGATTGTTGGTTAATGATTGAATGCAGGGGTGGGTAC
GAGTTTGCCGGGGCGTGGCTTGATAGCCGGTCAAGCCGGAGTAGGCGTCC
TGCCCCGGACCGACTTGGATGAACCTCGGCATGATGAATTGGCGCGAGCG
CGGGCGTGCTGCTGCCGATGCATTCCCTCGAGGATGCCGGTTGATTTTGG
TCCGCATGGCAAAGACGGTTTTCCAAAAGATTCATCCCCTGTCCCCGATA
TCTGCTAATAGAGCTCTCCTGGTGTCACTGTGGACGGATTTGCACCAAGT
TAGGTGGCTGCCGCACATGATTTTTGATGGTTTTGCGCTCTTGCAATCCG
AGAGGCTGCTTTCCCACGCCGTGTGTGCGTGTAGATTCTCAGCATTCGCT
TCTTCTGCCGATGACCGCTCTCAGTGCACAACTGTATCGCTCGCGACGGC
TGCATTCTCACACAACGCTTGCGTACCATGCCAAGGGGCAGAAAGCATGT
TACGTCGCTTGAACCTCTTGCTGCCGGGGGAACGTGCAACGATACAGACC
GGGTAGACGAGAGAGCATAGCATAGTCTGGTGAAAGGACATATTTTGTGT
CGAGCTTTGCTGTCTACCTAGCTGGTTCCTGAGCCGGTCTTTTTTCTTCG
CACGCGACCGCCCGTCGTTGTGCGTTGC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7250:1622..7649-

>mRNA_E_fasciculatus_S2_contig7250.15444.1 ID=mRNA_E_fasciculatus_S2_contig7250.15444.1|Name=mRNA_E_fasciculatus_S2_contig7250.15444.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=816bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7250:1622..7649- (Ectocarpus fasciculatus EfasUO2)
ATGGAGTCCACCAAGGCTATCTTCGAGAAGTACAAGCCGACCCACGTCAT
CCACCTCGCCGCGAGGGTGGGGGGATTGTTCAGCAACCTCAAGTACAAGG
TGGAGTTCTTCCGCGAGAACATCCTCATCAACGACAACGTGATGGAGTGC
TGCAGGATCTACAAGGTGGACAAGCTGGTGTCCTGCCTGTCGACGTGCAT
CTTCCCCGACAAGACCACCTACCCCATCGACGAGACCATGGTGCACAACG
GCCCGCCGCACACCAGCAACGAAGGGTACGCGTACGCGAAGCGCATGATC
GACGTGCTCAACCGCTGCTACAAGGGCCAGTACGGCTGCAACTTCACATC
GGTGATCCCCACCAACATCTACGGCAAGGGGGACAACTTCTCCATCGACA
ACGGACACGTGCTCCCGGGGCTCATCCACAAGTGCTACAAGGCGAAGCAG
GCGGGCGAGGACTTGCACGTTTGGGGCACCGGGAGCCCGCTCCGCCAATT
CATCTACAACGTCGACCTCGGCGCCCTGATGATCTGGACGATGCGCAACT
ACCACGAGGTAGATCCGATCATCCTGTCTGTCGGGGAGGAGGACGAAGTG
TCCATTGCGGACGCGGCGAAGATGATCGCGAGCGCGATGAACTTCGAAGG
GAACGTTGTCTTCGACACCGACAAGTCGGACGGACAGTTCAAGAAGACGG
CGTGCAACGACCTCCTTAAGAAGAAGAACCCTGAGTTCAAGTTCACATCC
ATGCAGGACGGGATCAAGGCGGCGTGCGACTGGTTCTGCGAGAACTACGA
GACTGCTCGCAAGTAG
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