mRNA_E_fasciculatus_S2_contig7213.15394.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7213.15394.1
Unique NamemRNA_E_fasciculatus_S2_contig7213.15394.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7213.15394.1 vs.
Match: Peroxisomal (membrane protein 70 abcd3, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS4_ECTSI)

HSP 1 Score: 848 bits (2192), Expect = 1.640e-299
Identity = 510/604 (84.44%), Postives = 524/604 (86.75%), Query Frame = 1
Query:   49 VRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQEQGQLSNSPGTAIPGAAAXXXXXXXDGTSVGSVTADADVXXXXXXXXXXXXXXX---ASRITPPRRNPPGVAGVSLATEEEENSPSWVAADVVGREGKVSGEPGLISNDDGDVSPAMAPSLDTARSTCRPAATSAAPADDHPAMMAGTEEAAAAAVGVARGQPELAPEAAGAXXXXXXXXXXXXXSGGGCSGG----RFAPPRLQRSGSVVVQEDSVIEFVDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLSKPPTSRLFYVPQRPYLALGTLRDQVIYPHTRQEAASKGVTDADLLSVLDSVRLGYVLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGDIYRLAASSGITLFTVSHRKSLWKHHGYLLRFDGLGGYEFKPMSDVAGDEQFGS 1839
            +RKPTAMYTALVAQQEGEYRYVNSRLLTNAQ EIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQ    + NSPG AI     XXXXXXX              XXXXXXXXXXXXXXX   A+RITPPRRNP GV+GV+LATEE+ NSPSW AAD  GREG  SGEPG I N+DGDVS  +     +     RP++ S APAD HPAMMAGT+   A+AVGVA GQPEL PEA   XXXXXXXXXXXXX            R   P LQRSGSVVVQEDSVIEFVDVPLVTPTGEVL+EALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLSKPPTSRLFYVPQRPYLALGTLRDQVIYPHTRQEAASKGVTD DLLSVLDSVRLGYVLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGDIYRLAASSGITLFTVSHRKSLWKHHGYLLRFDGLGGYEFK MSDVAGDE FGS
Sbjct:  124 LRKPTAMYTALVAQQEGEYRYVNSRLLTNAQ-EIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQ----VPNSPGAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARITPPRRNP-GVSGVNLATEEDGNSPSW-AADEGGREG-ASGEPGRIGNEDGDVSGTIPRLTSSLSEPARPSSISRAPADGHPAMMAGTK---ASAVGVALGQPELEPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGAPPLQRSGSVVVQEDSVIEFVDVPLVTPTGEVLVEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLSKPPTSRLFYVPQRPYLALGTLRDQVIYPHTRQEAASKGVTDVDLLSVLDSVRLGYVLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGDIYRLAASSGITLFTVSHRKSLWKHHGYLLRFDGLGGYEFKAMSDVAGDEHFGS 716          
BLAST of mRNA_E_fasciculatus_S2_contig7213.15394.1 vs.
Match: ATP-binding (cassette sub-family D member 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z212_9STRA)

HSP 1 Score: 439 bits (1129), Expect = 9.990e-141
Identity = 263/597 (44.05%), Postives = 330/597 (55.28%), Query Frame = 1
Query:   49 VRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQEQGQLSNSPGTAIPGAAAXXXXXXXDGTSVGSVTADADVXXXXXXXXXXXXXXXASRITPPRRNPPGVAGVSLATEEEENSPSWVAADVVGREGKVSGEPGLISNDDGDVSPAMAPSLDTARSTCRPAATSAAPADDHPAMMAGTEEAAAAAVGVARGQPELAPEAAGAXXXXXXXXXXXXXSGGGCSGGRFAPPRLQRSGSVVVQEDSVIEFVDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLSKPPTSRLFYVPQRPYLALGTLRDQVIYPHTRQEAASKGVTDADLLSVLDSVRLGYVLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGDIYRLAASSGITLFTVSHRKSLWKHHGYLLRFDGLGGYEFKPMSDVAGDEQFGS 1839
            +RKPT +YTALV  QEG YR+VN RL+T+A+ EIAFY GN KEK VL   F  LV++ RRS++FR+S+  +DS+ AKY AS+VGW  VSRPF+N   PR   ++ + +YQ+YHS+GRMML L+ ALGRLVLSGREL RLSGFS+RVT L+DVI+D  +G + R Q                                                        R +PP  N                                SG    +  D                                    AG E+                                                    SG VV + + VIEF  VPL TP G+VL+ +L+F+VE+GMNVLVAGPNG GKSSLFR+LGGLWP+RGG L KP  S++FYVPQRPYLALG+LR+QV+YP    ++ +    D  LL+V+  V+L Y+LDREGGWDAV+DW+DVLSGGEKQRLA++R+ Y++P FAILDECTSAVSVDVEG IY LA   GITLFTVSHR+SLW++H +LL FDG GGYEFK +SD   ++ FGS
Sbjct:  174 MRKPTGLYTALVQHQEGVYRHVNGRLITHAE-EIAFYGGNKKEKAVLSAAFADLVALVRRSQQFRYSMAVVDSIAAKYLASVVGWLTVSRPFLNLKDPRFKDASPSVLYQEYHSAGRMMLNLSQALGRLVLSGRELTRLSGFSARVTSLLDVIEDVAQGSYHRTQV-------------------------------------------------------RASPPPPNGTPKXXXXXXXXXXXXXXXXXXXXXXXXXXVASGAAEKLLGD------------------------------------AGVED--------------------------------------------------DESGGVVEESERVIEFDGVPLTTPNGDVLVRSLTFRVESGMNVLVAGPNGCGKSSLFRLLGGLWPVRGGRLVKPMRSKMFYVPQRPYLALGSLREQVLYPQA-VDSRAPAADDEHLLAVMQQVKLEYLLDREGGWDAVKDWADVLSGGEKQRLAMARMLYNKPLFAILDECTSAVSVDVEGSIYTLARELGITLFTVSHRRSLWQYHDFLLMFDGRGGYEFKRISDQ--EQAFGS 625          
BLAST of mRNA_E_fasciculatus_S2_contig7213.15394.1 vs.
Match: Long (chain acyl-CoA transporter ABC transporter n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CER2_PYTIN)

HSP 1 Score: 432 bits (1111), Expect = 2.070e-137
Identity = 251/597 (42.04%), Postives = 343/597 (57.45%), Query Frame = 1
Query:   49 VRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQEQGQLSNSPGTAIPGAAAXXXXXXXDGTSVGSVTADADVXXXXXXXXXXXXXXXASRITPPRRNPPGVAGVSLATEEEENSPSWVAADVVGREGKVSGEPGLISNDDGDVSPAMAPSLDTARSTCRPAATSAAPADDHPAMMAGTEEAAAAAVGVARGQPELAPEAAGAXXXXXXXXXXXXXSGGGCSGGRFAPPRLQRSGSVVVQEDSVIEFVDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLSKPPTSRLFYVPQRPYLALGTLRDQVIYPHTRQEAASKGVTDADLLSVLDSVRLGYVLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGDIYRLAASSGITLFTVSHRKSLWKHHGYLLRFDGLGGYEFKPMSDVAGDEQFGS 1839
            +R+PT  +T    + EG +R++NSRL+T+++ EIAFY GN +EK +L+  F +L+S+ R+S++FR S+  +DS+VAKYFA++VG+ VVS+PF++ DHPRH  ST AE  +DY  SG+M++KL+ A+GRLVLSGREL RL+GF++RVT +++V+ D +RG ++R      L++ P                                                                 ++++E+                        +DDG+ +P                                ++  AAA++G       LAP                                   +G  +V  D VI+F  VPLVTP G+VL+ +L  +VE+GMNV+VAGPNG GKSSLFR+LG LWPL GGTL+KP  + LFY+PQRPYL LG+LRDQ+IYPHT  +   +G TD +LL +L+ V+LGY++ REGGWD V DW+DVLSGGEKQR+A++RLFYH+PQFAILDECTSAVSVDVEG +Y       ITLFTVSHRKSLWK+H Y+LRFDG G YEFK + +   DE FGS
Sbjct:  245 LRQPTGRFTIAEQKMEGNFRFMNSRLITHSE-EIAFYNGNVREKHILDESFSRLISLLRQSQQFRFSVAVIDSIVAKYFATVVGFLVVSKPFLDLDHPRHRTSTYAERMEDYFRSGKMLVKLSEAMGRLVLSGRELTRLAGFTARVTEMLEVLGDLDRGTYQRTM----LASEP----------------------------------------------------------------TSKDDEDG-----------------------DDDGNTNPK-------------------------------SKTTAAASLG-------LAP-----------------------------------NGGKMVFADHVIQFEGVPLVTPNGDVLVRSLDVRVESGMNVVVAGPNGCGKSSLFRILGELWPLFGGTLTKPARNGLFYIPQRPYLTLGSLRDQIIYPHTVADMRERGRTDDELLQLLERVQLGYLVAREGGWDVVHDWADVLSGGEKQRVAMARLFYHKPQFAILDECTSAVSVDVEGAMYSYCREQDITLFTVSHRKSLWKYHEYVLRFDGRGNYEFKKIEEA--DEAFGS 674          
BLAST of mRNA_E_fasciculatus_S2_contig7213.15394.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFC8_PYTOL)

HSP 1 Score: 429 bits (1104), Expect = 1.690e-136
Identity = 244/597 (40.87%), Postives = 341/597 (57.12%), Query Frame = 1
Query:   49 VRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQEQGQLSNSPGTAIPGAAAXXXXXXXDGTSVGSVTADADVXXXXXXXXXXXXXXXASRITPPRRNPPGVAGVSLATEEEENSPSWVAADVVGREGKVSGEPGLISNDDGDVSPAMAPSLDTARSTCRPAATSAAPADDHPAMMAGTEEAAAAAVGVARGQPELAPEAAGAXXXXXXXXXXXXXSGGGCSGGRFAPPRLQRSGSVVVQEDSVIEFVDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLSKPPTSRLFYVPQRPYLALGTLRDQVIYPHTRQEAASKGVTDADLLSVLDSVRLGYVLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGDIYRLAASSGITLFTVSHRKSLWKHHGYLLRFDGLGGYEFKPMSDVAGDEQFGS 1839
            +R+PT  +T    + EG +R++N+RL+T+++ EIAFY GN +EK++L+  F +L+ + R+S++FR S+  +D++VAKYFA++VG+ VVSRPF++++HPRH +S+ AE  +DY  SG+M++KL+ A+GRLVLSGREL RL+GF++RVT ++DV+ D + G ++R                                                                         ++  + EE+S S                           SP                                T +A+A+++G+   + E+                                          + ED VI+F DVPLVTP G+VL++AL+ +VE+GMNV+VAGPNG GKSSLFR+LG LWPL GG L+KP  + LFY+PQRPYL LG+LRDQ+IYPH+ ++  + G T+ADLL  L+ V+LGY++DREGGWD V DW+DVLSGGEKQR+A++RLFYH+PQFAILDECTSAVSVDVEG +Y       ITLFTVSHRKSLWK+H Y+LRFDG G Y+FK + +   DE FGS
Sbjct:  245 LRQPTGRFTIAEQKMEGNFRFMNARLITHSE-EIAFYNGNVREKRILDQSFTRLIDLVRQSQQFRFSISVIDNIVAKYFATVVGYFVVSRPFLDKEHPRHLNSSYAERMEDYFRSGKMLIKLSEAMGRLVLSGRELTRLAGFTARVTEMMDVLTDLDEGRYQR-------------------------------------------------------------------------TMLKDNEEDSES---------------------------SP--------------------------------TAKASASSLGLYPNKGEM------------------------------------------LYEDHVIQFEDVPLVTPNGDVLVKALNVRVESGMNVVVAGPNGCGKSSLFRILGELWPLFGGKLTKPERNGLFYIPQRPYLTLGSLRDQIIYPHSHEDMIASGRTEADLLEFLEKVQLGYLVDREGGWDVVHDWADVLSGGEKQRVAMARLFYHKPQFAILDECTSAVSVDVEGAMYNHCREQNITLFTVSHRKSLWKYHEYVLRFDGRGDYQFKKIEEA--DEAFGS 664          
BLAST of mRNA_E_fasciculatus_S2_contig7213.15394.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLN4_9STRA)

HSP 1 Score: 424 bits (1089), Expect = 3.190e-134
Identity = 246/597 (41.21%), Postives = 328/597 (54.94%), Query Frame = 1
Query:   49 VRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQEQGQLSNSPGTAIPGAAAXXXXXXXDGTSVGSVTADADVXXXXXXXXXXXXXXXASRITPPRRNPPGVAGVSLATEEEENSPSWVAADVVGREGKVSGEPGLISNDDGDVSPAMAPSLDTARSTCRPAATSAAPADDHPAMMAGTEEAAAAAVGVARGQPELAPEAAGAXXXXXXXXXXXXXSGGGCSGGRFAPPRLQRSGSVVVQEDSVIEFVDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLSKPPTSRLFYVPQRPYLALGTLRDQVIYPHTRQEAASKGVTDADLLSVLDSVRLGYVLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGDIYRLAASSGITLFTVSHRKSLWKHHGYLLRFDGLGGYEFKPMSDVAGDEQFGS 1839
            +R+PT  +T    + EG +R++NSRL+T+++ EIAFY GN +EK++L+  F +L+ + R+S++FR S+  +D++VAKY A++VG+ VVS+PF++   PRH  ST AE  +DY  SG+M++KLA A+GRLVLSGREL RL+GF++RVT +IDV+ D + G ++R                                                                                                       ++ +DD D           A    + A TSA     HP                                                            +  V+V  D VI+F DVPLVTP G+VL+ AL+ +VE+GMNV+VAGPNG GKSSLFR+LG LWPL GGTL+KP  + LFY+PQRPYL LG+LRDQVIYPH+ ++  + G+TDADL   L+ V+LGY++ REGGWD V DW+DVLSGGEKQR+A++RLFYH+PQFAILDECTSAVSVDVEG +Y       ITLFTVSHRKSLWK+H ++LRFDG G YEFK + +   DE FGS
Sbjct:  245 LRQPTGRFTIAEQKMEGNFRFMNSRLITHSE-EIAFYNGNVREKKILDESFARLIDLVRKSQQFRFSVSVIDNIVAKYLATVVGFLVVSKPFLDMSDPRHLKSTYAERMEDYFRSGKMLIKLAEAMGRLVLSGRELTRLAGFTARVTEMIDVLSDLDEGRYQRT------------------------------------------------------------------------------------------------------MLKSDDDDAG--------DADGATKSATTSAEGLGLHP------------------------------------------------------------NKGVLVHRDHVIQFEDVPLVTPNGDVLVRALNLRVESGMNVVVAGPNGCGKSSLFRILGELWPLFGGTLTKPARNGLFYIPQRPYLTLGSLRDQVIYPHSLEDMQASGLTDADLEFFLEKVQLGYLVGREGGWDVVHDWADVLSGGEKQRVAMARLFYHKPQFAILDECTSAVSVDVEGAMYNHCREQNITLFTVSHRKSLWKYHEHVLRFDGRGNYEFKKIDEA--DEAFGS 668          
BLAST of mRNA_E_fasciculatus_S2_contig7213.15394.1 vs.
Match: ATP-binding (cassette sub-family D member 3 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065B641B)

HSP 1 Score: 424 bits (1089), Expect = 3.480e-134
Identity = 248/597 (41.54%), Postives = 323/597 (54.10%), Query Frame = 1
Query:   49 VRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQEQGQLSNSPGTAIPGAAAXXXXXXXDGTSVGSVTADADVXXXXXXXXXXXXXXXASRITPPRRNPPGVAGVSLATEEEENSPSWVAADVVGREGKVSGEPGLISNDDGDVSPAMAPSLDTARSTCRPAATSAAPADDHPAMMAGTEEAAAAAVGVARGQPELAPEAAGAXXXXXXXXXXXXXSGGGCSGGRFAPPRLQRSGSVVVQEDSVIEFVDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLSKPPTSRLFYVPQRPYLALGTLRDQVIYPHTRQEAASKGVTDADLLSVLDSVRLGYVLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGDIYRLAASSGITLFTVSHRKSLWKHHGYLLRFDGLGGYEFKPMSDVAGDEQFGS 1839
            +R+P    T    + EGEYRYVNSRL+TN++ EIAFY+GNT+EK ++ G F KLV   R    FR  +G +D+++AKY A++VG+ VVSRPF+N DHPRH +ST AE ++DY  SGRM++K+A A+GR+VL+GREL RL+GF++RVT L+ V++D N G ++R                                                                                                       +++ D+G                                                                           G G S    A      SG+++++ D +I+F  VPLVTP G+VLIE LSF+V +G NVL+ GPNG GKSSLFR+LG LWPL GGTL+KP   +LFYVPQRPY+A+GTLRDQVIYP    E   KGV D +L  +L  V+LG++LDREGGWD+V+DW DVLSGGEKQR+A++RLFYH+PQFAILDECTSAVSVDVEG +Y+ +   GITLFTVSHRKSLWKHH Y L+ DG G YEFKP+++     +FGS
Sbjct:  256 LRRPVGRMTVSEQKLEGEYRYVNSRLITNSE-EIAFYQGNTREKFIITGTFQKLVEHLRNFIFFRVQMGFIDNIIAKYLATVVGYLVVSRPFINLDHPRHKNSTHAERFEDYFRSGRMLVKMAEAIGRIVLAGRELTRLAGFTARVTELMRVLNDLNGGRYERT------------------------------------------------------------------------------------------------------MVNTDNG---------------------------------------------------------------------------GRGSSNNLKAMTLKPGSGNIIIK-DRIIKFDKVPLVTPNGDVLIEELSFEVHSGKNVLICGPNGCGKSSLFRILGELWPLFGGTLTKPEKGKLFYVPQRPYMAVGTLRDQVIYPDNHTEQLKKGVKDKELQEILSKVQLGHILDREGGWDSVQDWMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGFMYQHSREVGITLFTVSHRKSLWKHHEYYLKMDGRGYYEFKPITEDT--TEFGS 671          
BLAST of mRNA_E_fasciculatus_S2_contig7213.15394.1 vs.
Match: ATP-binding (cassette n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UCF6_CAPO3)

HSP 1 Score: 421 bits (1081), Expect = 5.040e-133
Identity = 251/597 (42.04%), Postives = 326/597 (54.61%), Query Frame = 1
Query:   49 VRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQEQGQLSNSPGTAIPGAAAXXXXXXXDGTSVGSVTADADVXXXXXXXXXXXXXXXASRITPPRRNPPGVAGVSLATEEEENSPSWVAADVVGREGKVSGEPGLISNDDGDVSPAMAPSLDTARSTCRPAATSAAPADDHPAMMAGTEEAAAAAVGVARGQPELAPEAAGAXXXXXXXXXXXXXSGGGCSGGRFAPPRLQRSGSVVVQEDSVIEFVDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLSKPPTSRLFYVPQRPYLALGTLRDQVIYPHTRQEAASKGVTDADLLSVLDSVRLGYVLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGDIYRLAASSGITLFTVSHRKSLWKHHGYLLRFDGLGGYEFKPMSDVAGDEQFGS 1839
            +R+PT  YT    + EGE+R+VNSRL+TNA+ EIAFY GN KEK V+   F++LV++ RRS +FR  +G +DS VAKYFA+++G+TVVSRPF++    R    + +E+ +DY+ SGRM++ LA A+GRLVL+GREL RL+GF++R+T L++V+ D N   +KR   Q Q + +  TA   AAA                                                           ++NS                                                                            G P +AP A                                     +  +D VI+F +VPLVTP G++L+ ALSF+V++G NVLVAGPNG GKSSLFR LG LWP+ GG L+KP   +LFYVPQRPY+ LGTLRDQVIYPH++ + A +G+TDADLL  L  V+L Y+ DRE GWDAV+DW DVLSGGEKQR+A++RLFYHRPQFAILDECTSAVSVDVEG +Y       ITLFTVSHRKSLW+HH Y+L+FDG G YE++ +   A  E FGS
Sbjct:  249 LRRPTGWYTVNEQRLEGEFRFVNSRLITNAE-EIAFYNGNEKEKLVITQTFNRLVNMLRRSMQFRFGMGVIDSFVAKYFATIIGFTVVSRPFMDPTSERFKGMSHSEMMEDYYKSGRMLINLATAVGRLVLAGRELTRLAGFTTRMTDLMEVLHDLNHDRYKRTMVQSQQAGASATA---AAA-----------------------------------------------------------QDNS----------------------------------------------------------------------------GLPPVAPNA-----------------------------------GKIFYQDHVIKFENVPLVTPNGDILVRALSFEVKSGCNVLVAGPNGCGKSSLFRTLGELWPIFGGKLTKPAKEKLFYVPQRPYMTLGTLRDQVIYPHSQADLAKRGMTDADLLEFLKQVKLDYLADRENGWDAVQDWMDVLSGGEKQRVAMARLFYHRPQFAILDECTSAVSVDVEGFMYDHCRKLNITLFTVSHRKSLWRHHEYVLQFDGKGVYEYRAIDHKA--EHFGS 669          
BLAST of mRNA_E_fasciculatus_S2_contig7213.15394.1 vs.
Match: Uncharacterized (protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433T5Q9_ELYCH)

HSP 1 Score: 416 bits (1070), Expect = 1.910e-131
Identity = 244/601 (40.60%), Postives = 322/601 (53.58%), Query Frame = 1
Query:   37 VLCLVRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQEQGQLSNSPGTAIPGAAAXXXXXXXDGTSVGSVTADADVXXXXXXXXXXXXXXXASRITPPRRNPPGVAGVSLATEEEENSPSWVAADVVGREGKVSGEPGLISNDDGDVSPAMAPSLDTARSTCRPAATSAAPADDHPAMMAGTEEAAAAAVGVARGQPELAPEAAGAXXXXXXXXXXXXXSGGGCSGGRFAPPRLQRSGSVVVQEDSVIEFVDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLSKPPTSRLFYVPQRPYLALGTLRDQVIYPHTRQEAASKGVTDADLLSVLDSVRLGYVLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGDIYRLAASSGITLFTVSHRKSLWKHHGYLLRFDGLGGYEFKPMSDVAGDEQFGS 1839
            +L  +R+P    T    + EGEYRYVNSRL+TN++ EIAFY+GN +EK ++ G F+KL+        FR  +G +D+++AKY A++VG+ VVSRPF+N  HPRH +ST +E+ +DY  SGRM++K+A A+GR+VL+GREL RL+GF++RVT L+ V+DD N G ++R    G    +  T +                                                          S+A +                       PG                                                                                                  SG+V++Q D +I+F  VPLVTP G+VLIE LSF+V +G NVL+ GPNG GKSSLFR+LG LWPL GGT++KP   +LFYVPQRPY+A+GTLRDQVIYP    E   KGV D +L  +L+ V+LG++L+REGGW+AV+DW DVLSGGEKQR+A++RLFYH+PQFAILDECTSAVSVDVEG +Y  +   GITLFTVSHRKSLWKHH Y L+ DG G YEF P+++   +  FGS
Sbjct:  247 ILTRLRRPVGRMTVTEQKLEGEYRYVNSRLITNSE-EIAFYQGNIREKFIITGTFNKLIEHLNNFIFFRTQMGFIDNIIAKYVATVVGYLVVSRPFLNLAHPRHQNSTHSELLEDYFKSGRMLVKMAEAIGRIVLAGRELTRLAGFTARVTDLLKVLDDLNGGRYERTMVSGDSGRNSSTNLK---------------------------------------------------------SMALK-----------------------PG--------------------------------------------------------------------------------------------------SGNVIIQ-DHIIKFDKVPLVTPNGDVLIEELSFEVRSGQNVLICGPNGCGKSSLFRILGELWPLFGGTMTKPEKGKLFYVPQRPYMAVGTLRDQVIYPDNHAEQLRKGVKDQELADILEKVQLGHILEREGGWEAVQDWMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGFMYNHSREVGITLFTVSHRKSLWKHHEYYLKMDGRGYYEFMPITEDTAE--FGS 665          
BLAST of mRNA_E_fasciculatus_S2_contig7213.15394.1 vs.
Match: Hypothetical (protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HJL1_9EUKA)

HSP 1 Score: 411 bits (1057), Expect = 1.940e-131
Identity = 245/597 (41.04%), Postives = 319/597 (53.43%), Query Frame = 1
Query:   49 VRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQEQGQLSNSPGTAIPGAAAXXXXXXXDGTSVGSVTADADVXXXXXXXXXXXXXXXASRITPPRRNPPGVAGVSLATEEEENSPSWVAADVVGREGKVSGEPGLISNDDGDVSPAMAPSLDTARSTCRPAATSAAPADDHPAMMAGTEEAAAAAVGVARGQPELAPEAAGAXXXXXXXXXXXXXSGGGCSGGRFAPPRLQRSGSVVVQEDSVIEFVDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLSKPPTSRLFYVPQRPYLALGTLRDQVIYPHTRQEAASKGVTDADLLSVLDSVRLGYVLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGDIYRLAASSGITLFTVSHRKSLWKHHGYLLRFDGLGGYEFKPMSDVAGDEQFGS 1839
            +R+PT  YT L  + EGE+R+VNSRL+TN++ EIAFY+GN KE+QV++  F ++V + R+S +FR  +G +D++VAKY A++VG+ VVSRPF+N    RH   +  E+ QDY+ SGRM++ LA A+GRLVL+GREL RL+GF+ RVT L+DV+DD N+G + R                             T V                                                                                        DT+ S  +P +                            GQ                                            +++ D +I F DVPLVTP G+VL+++L+F+V++GMNVLV GPNG GKSSLFR+LG LWPL GGTL KP   +LFYVPQRPY+ LGTLRDQV YPH  ++    GVTD DL   L  V+L Y++DREGGWDAV DW DVLSGGEKQR+A++RLFYH+PQFAILDECTSAVSVDVEG +Y   +  GITLFTVSHRKSLWK+H Y+L FDG G Y +K +++    E+FGS
Sbjct:  115 LRRPTGRYTILEQRLEGEFRFVNSRLITNSE-EIAFYQGNGKERQVIDSTFARMVKLLRKSMKFRFFMGVVDTMVAKYLATVVGFYVVSRPFLNPASTRHVGFSKDEIMQDYYKSGRMLMNLATAVGRLVLAGRELTRLAGFTVRVTELMDVLDDLNKGKYVR-----------------------------TMVNK--------------------------------------------------------------------------------------DTSASNLKPGS----------------------------GQ--------------------------------------------LIEVDHLIRFDDVPLVTPNGDVLVKSLNFEVKSGMNVLVCGPNGCGKSSLFRILGELWPLFGGTLRKPAKEKLFYVPQRPYMTLGTLRDQVAYPHRHEDLKRLGVTDDDLAVYLSHVQLSYLIDREGGWDAVEDWMDVLSGGEKQRVAMARLFYHKPQFAILDECTSAVSVDVEGFMYTHCSEIGITLFTVSHRKSLWKYHEYVLAFDGRGDYSYKNINEA---EEFGS 520          
BLAST of mRNA_E_fasciculatus_S2_contig7213.15394.1 vs.
Match: ABC (transporter domain-containing protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6F7R5_ELECQ)

HSP 1 Score: 404 bits (1037), Expect = 1.160e-129
Identity = 237/582 (40.72%), Postives = 307/582 (52.75%), Query Frame = 1
Query:   67 MYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQEQGQLSNSPGTAIPGAAAXXXXXXXDGTSVGSVTADADVXXXXXXXXXXXXXXXASRITPPRRNPPGVAGVSLATEEEENSPSWVAADVVGREGKVSGEPGLISNDDGDVSPAMAPSLDTARSTCRPAATSAAPADDHPAMMAGTEEAAAAAVGVARGQPELAPEAAGAXXXXXXXXXXXXXSGGGCSGGRFAPPRLQRSGSVVVQEDSVIEFVDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLSKPPTSRLFYVPQRPYLALGTLRDQVIYPHTRQEAASKGVTDADLLSVLDSVRLGYVLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGDIYRLAASSGITLFTVSHRKSLWKHHGYLLRFDGLGGYEFKPMSD 1812
            +Y+ L  + EGEYRYVNSRL+TN++ EIAFY GN +EK  +   F KLV    +   FR S+G +D+++AKYFA++VG+ VVSRPF+  +HPRH  S+ AE+ +DY+ SGRM+L+++ ALGR+VL+GRE+ RL+GF++R+T L+ V+ D N G ++R                                                                        VS   +E E+ PS                                                                                                               P +  SG V+   D++I+F  VPL TP G++LI  L+F+V +G NVLV GPNG GKSSLFRVLG LWPL GG+L+KP   +LFYVPQRPY+ LGTLRDQVIYP T+ +   KG+ D  L   LD+V+LG +L+REGGWD+V+DW DVLSGGEKQR+A++RLFYH+PQFAILDECTSAVSVDVEG IY      GI+LFTVSHRKSLWKHH Y L  DG G YEFKP++D
Sbjct:   29 LYSNLSKRYEGEYRYVNSRLITNSE-EIAFYNGNKREKLTIYSAFHKLVEHLHKFIVFRFSMGFVDNIIAKYFATVVGYLVVSRPFLTLNHPRHLTSSHAELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLAGFTARITELMQVLKDLNHGKYERTM----------------------------------------------------------------------VSQQDKESESLPSI--------------------------------------------------------------------------------------------------------------PLIPGSGKVI-NADNIIKFDHVPLATPNGDMLIRDLTFEVRSGTNVLVCGPNGCGKSSLFRVLGELWPLFGGSLTKPERGKLFYVPQRPYMTLGTLRDQVIYPDTQDDQKRKGIPDKVLKDYLDNVQLGQILEREGGWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEGYIYNHCRKVGISLFTVSHRKSLWKHHEYYLHMDGRGKYEFKPITD 428          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7213.15394.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Peroxisomal1.640e-29984.44membrane protein 70 abcd3, putative n=1 Tax=Ectoca... [more]
ATP-binding9.990e-14144.05cassette sub-family D member 3 n=1 Tax=Tribonema m... [more]
Long2.070e-13742.04chain acyl-CoA transporter ABC transporter n=2 Tax... [more]
Uncharacterized1.690e-13640.87protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Uncharacterized3.190e-13441.21protein n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more]
ATP-binding3.480e-13441.54cassette sub-family D member 3 n=1 Tax=Aplysia cal... [more]
ATP-binding5.040e-13342.04cassette n=1 Tax=Capsaspora owczarzaki (strain ATC... [more]
Uncharacterized1.910e-13140.60protein n=1 Tax=Elysia chlorotica TaxID=188477 Rep... [more]
Hypothetical1.940e-13141.04protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602... [more]
ABC1.160e-12940.72transporter domain-containing protein n=1 Tax=Eleu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7213contigE_fasciculatus_S2_contig7213:1272..7751 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score845.1
Seed ortholog evalue2e-242
Seed eggNOG ortholog2880.D7FQS4
Preferred nameABCD3
Model size2498
KEGG koko:K05677
KEGG TC3.A.1.203.1
KEGG Pathwayko02010,ko04146,map02010,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0000038,GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005324,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005779,GO:0005782,GO:0005829,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006635,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006996,GO:0007031,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009653,GO:0009987,GO:0010033,GO:0010876,GO:0014070,GO:0015399,GO:0015405,GO:0015711,GO:0015718,GO:0015849,GO:0015908,GO:0015909,GO:0015910,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016053,GO:0016054,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019395,GO:0019752,GO:0022804,GO:0022857,GO:0030258,GO:0030554,GO:0030587,GO:0031090,GO:0031224,GO:0031231,GO:0031288,GO:0031300,GO:0031301,GO:0031903,GO:0031907,GO:0031974,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033036,GO:0034440,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042579,GO:0042623,GO:0042626,GO:0042760,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043190,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043492,GO:0043621,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0046394,GO:0046395,GO:0046942,GO:0046983,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0055114,GO:0070013,GO:0071702,GO:0071704,GO:0071840,GO:0071944,GO:0072329,GO:0072330,GO:0090702,GO:0097159,GO:0097367,GO:0098533,GO:0098588,GO:0098796,GO:0098797,GO:0098805,GO:0099120,GO:1901265,GO:1901363,GO:1901575,GO:1901576,GO:1902494,GO:1902495,GO:1904949,GO:1990351
Exons7
EggNOG free text desc.ATP-binding cassette sub-family D
EggNOG OGsCOG4178@1,KOG0060@2759
Ec32 ortholog descriptionABC transporter type 1, transmembrane domain
Ec32 orthologEc-01_000320.1
Cds size1776
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7213.15394.1prot_E_fasciculatus_S2_contig7213.15394.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7213 1928..7685 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842384.6168342-UTR-E_fasciculatus_S2_contig7213:1271..19271696842384.6168342-UTR-E_fasciculatus_S2_contig7213:1271..1927Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7213 1272..1927 -
1696842384.710638-UTR-E_fasciculatus_S2_contig7213:7685..77511696842384.710638-UTR-E_fasciculatus_S2_contig7213:7685..7751Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7213 7686..7751 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842384.6281753-CDS-E_fasciculatus_S2_contig7213:1927..20111696842384.6281753-CDS-E_fasciculatus_S2_contig7213:1927..2011Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7213 1928..2011 -
1696842384.63722-CDS-E_fasciculatus_S2_contig7213:2857..29591696842384.63722-CDS-E_fasciculatus_S2_contig7213:2857..2959Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7213 2858..2959 -
1696842384.6527348-CDS-E_fasciculatus_S2_contig7213:3564..37711696842384.6527348-CDS-E_fasciculatus_S2_contig7213:3564..3771Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7213 3565..3771 -
1696842384.6647005-CDS-E_fasciculatus_S2_contig7213:4306..45131696842384.6647005-CDS-E_fasciculatus_S2_contig7213:4306..4513Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7213 4307..4513 -
1696842384.6754923-CDS-E_fasciculatus_S2_contig7213:5776..66391696842384.6754923-CDS-E_fasciculatus_S2_contig7213:5776..6639Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7213 5777..6639 -
1696842384.6875632-CDS-E_fasciculatus_S2_contig7213:7140..73771696842384.6875632-CDS-E_fasciculatus_S2_contig7213:7140..7377Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7213 7141..7377 -
1696842384.697736-CDS-E_fasciculatus_S2_contig7213:7609..76851696842384.697736-CDS-E_fasciculatus_S2_contig7213:7609..7685Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7213 7610..7685 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7213.15394.1

>prot_E_fasciculatus_S2_contig7213.15394.1 ID=prot_E_fasciculatus_S2_contig7213.15394.1|Name=mRNA_E_fasciculatus_S2_contig7213.15394.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=592bp
MYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVS
VTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAA
EVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDA
NRGVFKRGQEQGQLSNSPGTAIPGAAAGAAAAGADGTSVGSVTADADVAA
AAEMSAAAPAAPAASRITPPRRNPPGVAGVSLATEEEENSPSWVAADVVG
REGKVSGEPGLISNDDGDVSPAMAPSLDTARSTCRPAATSAAPADDHPAM
MAGTEEAAAAAVGVARGQPELAPEAAGAARVSDAAAAAVGVSGGGCSGGR
FAPPRLQRSGSVVVQEDSVIEFVDVPLVTPTGEVLIEALSFKVEAGMNVL
VAGPNGSGKSSLFRVLGGLWPLRGGTLSKPPTSRLFYVPQRPYLALGTLR
DQVIYPHTRQEAASKGVTDADLLSVLDSVRLGYVLDREGGWDAVRDWSDV
LSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGDIYRLAASSGITL
FTVSHRKSLWKHHGYLLRFDGLGGYEFKPMSDVAGDEQFGS*
back to top

mRNA from alignment at E_fasciculatus_S2_contig7213:1272..7751-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7213.15394.1 ID=mRNA_E_fasciculatus_S2_contig7213.15394.1|Name=mRNA_E_fasciculatus_S2_contig7213.15394.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6480bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7213:1272..7751- (Ectocarpus fasciculatus EfasUO2)
CCTCTCTCTCTCCCTCTCTCCCTCTCTCTCTCTCGTGTTCTGTGTCTTGT CAGAAAACCGACTGCGATGTACACTGCACTGGTGGCGCAGCAGGAGGGGG AGTACCGCTACGTTAATAGTCGACTGCTCACCAACGCGCAAGGTGCGTGC GGAGAATGTTATCCGATTCGCGAGCCCCCTTAAGGCGCCTTTAAACCCCC GGGGTAGCGCAACTCTTGCTTAGCAAGCCGATTTCATGCGAAGCTGCTGA AGTTCGTGCGCTGGTGTGTTGACCTACACGACCGTCTGCGCTCCATGCAC AATGGCACCCCTCATCGGCCCCGGATTTTTTTTTTCTGAATCGTCGCACG TTAATTCACCCAACCCTCTCCGAGCAGAGATCGCGTTCTACAAGGGCAAC ACCAAGGAGAAACAGGTGCTGGAGGGGGTGTTCGATAAGCTGGTGTCCGT CACGAGGCGGTCGGAGAGGTTCCGTCACTCTCTCGGGGCGCTTGACTCGG TGGTGGCAAAGTACTTCGCTAGCCTCGTGGGCTGGACGGTGGTGTCCCGT CCCTTCGTCAACAGGGACCACCCGAGACACGCACACAGCACCGCGGCCGA GGTCTACCAAGGTTCGTGAGTGTCATGGAGCACGTGGTAGTGACGCTCGT ATCTCTAAACCACAACACATGATACGCTCAAAACAATGAAGGAGATATGC ACAATATTTGGGCTCTCTAACCACAGCACATGATGACATGTTCAAGACAA TGAAGGAAGCAAACTTGCTCGATATTTGGATTTTGCGGGAATCGTCCTGT AATTTTTATTTCAAGTCGGAACACCGGGCCCCCCCGCGTAAATTGGTTTG TATTTTTATTTCGATTCTCTACAGAGAAGCCGCTGAACAGATGCTTGCGG CACTCTTGTAAAGGAAAACGCCTCTGCGCGGTATGCACACGCTTTTTGAC ACGGGTGCAAGACAACCCGCCTTTTGTCAGCTTCACCATCGTGACCATGC GTGCATGTTCTTTTTCGGTGTATTGACTAATCTAACTGCGCCCCGCACCT CCCTTTCTGGCGCGCCCAAATCCTCCAATCTCTTCGTCTTGTGTCGCCCG CTGCACCACAAGACTACCACTCGAGCGGCAGGATGATGCTCAAACTGGCG GCAGCCCTCGGCCGCCTGGTGCTCTCCGGCCGAGAGCTAGCCCGCCTGTC GGGCTTCAGCTCTAGGGTCACGGGCCTCATCGACGTGATCGACGACGCCA ACAGAGGCGTTTTTAAGAGGGGACAGGAACAGGGACAGCTGTCGAACAGC CCCGGTACCGCTATCCCCGGAGCGGCGGCGGGAGCCGCCGCAGCGGGCGC TGACGGTACCTCGGTAGGGTCGGTAACGGCGGACGCAGACGTTGCCGCAG CAGCAGAGATGTCGGCGGCGGCGCCTGCGGCGCCGGCTGCGTCGAGAATA ACGCCTCCTCGACGAAACCCCCCCGGGGTGGCGGGGGTTAGCCTCGCCAC GGAGGAGGAAGAGAATTCGCCGAGTTGGGTGGCAGCGGATGTGGTGGGAC GAGAAGGGAAAGTGTCCGGGGAACCCGGGCTTATCAGCAACGATGACGGC GACGTTTCTCCGGCGATGGCGCCATCATTGGACACAGCTAGAAGTACATG TAGGCCTGCGGCGACCTCGGCCGCACCCGCAGATGACCATCCCGCGATGA TGGCCGGAACGGAGGAGGCGGCGGCGGCGGCGGTAGGAGTAGCCCGAGGG CAGCCCGAGCTCGCGCCCGAAGCTGCTGGGGCCGCGAGGGTCTCGGACGC GGCGGCGGCGGCGGTGGGGGTGAGCGGTGGGGGTTGCAGCGGCGGGCGGT TCGCGCCGCCGCGGCTGCAGCGATCGGGGTCGGTGGTCGTGCAGGAGGAC AGCGTGATCGAGTTTGTGGACGTGCCTCTCGTCACCCCCACCGGGGAGGT GCTGATCGAAGCCCTTTCTTTCAAGGTGGGTGTAGAGTCTTATGTTCCGG TCTTGACAAGAATCTCGGGTGTATCTATCTATTGCAAGGAGGACAACAGC TGAAGACCGTACATTGTACTGCTGTACCGCTAAAAACATCGTGGTGTAGT ACAAGCATTTGCTTTGTGAGCTCTGGTGCTGGTCCAAGACGCTTTCTTTC AAGGCAGGCAGGCATGGTTGGTCTTGACAAGGCTGGTTGTACTCACGACG AAGAGGTCAGCAGCAGAAGACCATTAAGTGTACCGCTTGAAACGCCGTGG TGTATGTGAATGCATCATAGCTCGATCTCTTGGTGCAGTGGAGCGGCGTG GCGAAGCGTAGAACAAGATGAAGGGGGGTGCAAAAGTGTGTTCGATAGAT GGCTCCAGCTTCCTTTCCTTGGGGAGTATCCCCGCCATTACATGTACCAT CGCGGCTCACGGGTACAATCGTTCGGTCTATGAGCCACCCAGGGTGATCC ACATCATCTGTTTGCTGCTACGACAGTAGCATGCTGCTCGACGTATGGAA AATGCGAGAACTTATGCCCTCCCTAACGCCGACTCACGAACAGATCACTC GCACCGACCTACTCTGAGCGTGGGGGGACCGCAGATTGGATGACGGGGTC CCCATCCGATCTGACGCGCCAACCCTCACAGAGTTTCTGCTTATTCTCAG ACCCGTGCCCGCCGGATGGTTGGTTCTCATCCTCGTCGACTTGCTCGTGA CGAATGAACAAAAGAATACCCTGATAGACCTTCCCACGCCACTGTTGGAT CTGGAGTGATGAAGCGATTCAATATTTATTACATAAAGTGTATTTGGCGA ACGGGTAGTCTTTCGGTGACTGTATGTATATTTTCAGGTAACTGCCTCTG TCGTGATGAAACGATTCAAACTACCCCCGCCGTCATTTTCTCGAAGGAAC GATTGGCCATCGGTGATGGCTCCTGTTGGAACAACGCTACGTGCGTCCTC TCGAGGACGCGTGGGCAATGGTCTAACAACAACTAAGGCATGCGAAACAC GAGGACGCCCCCCCCCCCCCCCCCCCCCTGTTTTTTTTTTTTTTTTGTTT CCGCGGGGGGGGGGGGACGAGGAATTTAGGGGGGGGGCCGGCCGGGTGGG GGCGAACTAGCCNNNNNNNNNNTCTCGTGGTCCTCTCGAGGGCGGGGGGG GAGTGGTCTAAAAACAAACAAGGGATGCGAAACACTGCGGGGCCCCCCCC CCCCCCCTCCCCCTGTTTTTTTTCTATCGGGTTTCCAGGTGGAGGCGGGC ATGAACGTGTTAGTGGCGGGACCGAACGGGTCTGGGAAATCTAGCCTATT TCGGGTGCTGGGGGGCCTGTGGCCGTTGCGAGGAGGCACGCTGTCGAAGC CGCCTACATCTCGGCTGTTTTACGTTCCCCAGAGGCCCTATTTGGCACTG GGGACCCTGCGGGACCAAGTGATCTACCCGCATACGCGGCAAGAGGTGGG GGGCAGAGTGACCGCTACTTGGCTGCAGTGCGCAGCCTTGGCCGTAGTGA CAAGCAAGGAGATGTTGCTGTGTCCTTTGGATTGGTGTTGGTGTTGGTTT GGATGTTGTGTTTGTTCGTGCAGCGCTGCAGAAGCTGTGTTGTGCGCGAG TTGCATCCGGCTTCGAAGACGTTAGTCGAAGAGGCAGGGCTACTGTACGT TACGCCGGTGCTGCCGCCGCCCGAACGATCGGCACATCGGCACATGCTCT GTATCTCTTGTATTCCGTCGCTCGGCAATACAATAGCCAGCGAGGCCCGC GACGACTCCCGCTGTTGTTGATCAACCGCGATAACGCGACCAACAAGTAA CCCGTCCAGCCCCAATGCCAACTTAGGCTTGAAAAAATACCTCCACCCTC AGTAGTAAGCCTTCCTTCGGGCACACGATGCGTCACCGTTATTTCCAAGA CTTGCGTTGCCGTAGACCCCCCCCCCTGCCGACATTACGACGAAAATGAC CTGACTTAGTGCTGCCCTCTCACCTCTCAGGCAGCCTCAAAGGGGGTCAC CGACGCTGACCTGCTATCGGTGTTGGACTCCGTGAGGCTGGGCTACGTGC TGGACCGGGAGGGGGGCTGGGACGCGGTGCGGGATTGGAGCGATGTCCTG TCGGGCGGCGAGAAACAGCGGCTGGCTCTCAGCAGGCTCTTCTACCACAG GCCGCAGTTCGCCATCCTCGATGAGTGCACAAGCGCCGTGAGTGATGATG ATGACTTTGGTGCCCTTGTGCTTGGCCATGCGATGTCTGTCTCCCTGCAC CTACCTCAAAACCCCTTCGCATTACAATATGTTCTCAAGTACGATTCTGC CGCCGCAGTTCTTTGATGAGTGCACAAGCGCGGTGAGTGCCCGGTCATTG ACTCTGTCCGCTGCACCTTCCTGACTATTGTGTGTTTATGTCTCAGTTGC GTTTCTGGCAATTTCTTGGCATGTTTTTTGTTGTCGTTGCATCAACCGCT GCTTAGCAACGACGGGGTGGTTCAATGTTGTGGCAAATGTGCCGTAAAAG TTGCCGTTGATGCTGCTGTTGTTGGTGTTGGTGTTTGTAGCGGTGTCGGT GGAGTTAAGCGTTACAGTACTGCTGTTGTCGTCTTTTGTTCCACGGGTCA CAGCAGTGTAGCCCTCGCTCCCTTTTACACAGCCTCCTCCGCCACAAGCC ATACCGCGTAGCCGTCGATGTCTCACCGGTCACAGCTGTCCAGCCCTCGT TACCTTTCAACACACACCCTTCCTCTGCCAAGCCATGACACGGGTTCTGT GGCGCTCAATACCATGTGATGTTGGTGCCCATTGTCACGCAGGTTAGCGT CGATGTGGAGGGCGACATCTACCGCCTGGCCGCGAGCAGCGGGATCACTC TCTTCACGGTGTCCCACCGCAAGAGCCTGTGGAAGCACCACGGCGTGAGT CCTGCAGTCTATGCCTTCACCCCCTCGGGATGTTAATGTTTCCCGAAGAA CACAGCTTAATGGCAAGGACAGACAGAACGAAGCTATTGACCGAGAGAGA GACCCGAGCTCGGTACAATAGAGCTTGGGAAAGTCGTTTCTGCTTGCACG AATAACCTAGAGGACTCGTCCGCCCACTTGATATCCTCGGAAACCTCGTA CTAGACGAAGCAACATTGAGGGTCGGATCTCTCGGGCGTGAACAATTGCA ACCTAGGGGTGAAAAGCTCATATTCGCGTTAACACGATGAGATGGAGGTG CCGAATGAACGTTCAAGTTGAAGACAAGCACCGCAAGGAGAACGAACGAG AACAGAAATAAACTCCTTTGTTTAACCCGGTCGACTCGACTGCTGTTGAG TGAACGAAACCTGTTGCTAATATAGTTGAGATTGTTTCAGGTGTCATTTT TCGAGGAAAGGATGTGGTGCGGGTTGCTCTTCTCAGCAGAGACATTCCAA CCGGGCACGTATTATTTGGTGCCGCTGGACAAAACAACCCCGCCCGTGCT CGACAGACGTATTTTGGACGCCCGCTCCCCCCCCCCCCCCCCAACGCTCC TGGTTGGCGAACCCCCTCGTTCTCCATCCCGATCTTCCCAAGCACTAAAT AAGCACTATATAAATTGGCTCGTAAGGACCCACACCAAGAGATCGGCGGT CGTTGTACTGCTGTGTACTGTACCCGTTTTGTTTCGCTTCTTTCAATCAT GAGTCAACTCGTATCTTTGTTCCCGAAGCACTGCTGACAGTACTCCCACA ATCCTCTTTTCCGCGAACAACCCCCGTTTGCTTCGCTCAGTACCTGTTGC GGTTCGACGGGCTGGGCGGGTACGAGTTCAAGCCCATGTCGGACGTGGCT GGTGACGAACAGTTTGGTTCCTGACCCGGATGGATGGTCACGACGGGAGC TAAATCCGTTTGGATTGGACTTGTGCGTAGGCCTCGCTCTGTAGAAGTGC GAGTGGTGCGCTCTTGCTCTGGGACCGCTATTGTATTTTACTCCAATAGG TAGGGTGATGCTGAGATGTCAGTATAATCCTAGTTATTGTAGTTTGGAGG AGCGATGAGTGTCGTGAGGGTTGTGGGGAGCCCATCTTGAAAGTGAAAGA TTTCAATCCGTGGGTGTTTACGGTGGGAGTTATCAGGAAGAGGGGTCTTT TCGTTCTCGACAGTTTCTCTTATAAAACCGGACGGCTTAAGCTTAACTAA CCCTTCACGACGGGCGGTTGGGGGAAAGGGCTAGCCCCTTGATTAGGTCG ACCGCTGATCGAGATACCCTTACGTTAACATAGAAGATGAGGCGCGACGA CGACGAAGTATGCCTGGTAGACTGGTAGACCACAGCCTACCAGCGGATGG GATTGTGAATCGACCAAGCGTTTGCGTTGCAATACATGTACGCGCAGCTT CGAGAAAACATCGCCTTTTGGACCTACACGAGAGATTTTCAATGTATCTC GTCTCCGCGTCTGCAGTGCACGACGGTCGCCAACAAAAATGAGACGACTG GGAGTTTTGTTCCTGTCCCTTGTACGGGAG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7213:1272..7751-

>mRNA_E_fasciculatus_S2_contig7213.15394.1 ID=mRNA_E_fasciculatus_S2_contig7213.15394.1|Name=mRNA_E_fasciculatus_S2_contig7213.15394.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1776bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7213:1272..7751- (Ectocarpus fasciculatus EfasUO2)
ATGTACACTGCACTGGTGGCGCAGCAGGAGGGGGAGTACCGCTACGTTAA
TAGTCGACTGCTCACCAACGCGCAAGCAGAGATCGCGTTCTACAAGGGCA
ACACCAAGGAGAAACAGGTGCTGGAGGGGGTGTTCGATAAGCTGGTGTCC
GTCACGAGGCGGTCGGAGAGGTTCCGTCACTCTCTCGGGGCGCTTGACTC
GGTGGTGGCAAAGTACTTCGCTAGCCTCGTGGGCTGGACGGTGGTGTCCC
GTCCCTTCGTCAACAGGGACCACCCGAGACACGCACACAGCACCGCGGCC
GAGGTCTACCAAGACTACCACTCGAGCGGCAGGATGATGCTCAAACTGGC
GGCAGCCCTCGGCCGCCTGGTGCTCTCCGGCCGAGAGCTAGCCCGCCTGT
CGGGCTTCAGCTCTAGGGTCACGGGCCTCATCGACGTGATCGACGACGCC
AACAGAGGCGTTTTTAAGAGGGGACAGGAACAGGGACAGCTGTCGAACAG
CCCCGGTACCGCTATCCCCGGAGCGGCGGCGGGAGCCGCCGCAGCGGGCG
CTGACGGTACCTCGGTAGGGTCGGTAACGGCGGACGCAGACGTTGCCGCA
GCAGCAGAGATGTCGGCGGCGGCGCCTGCGGCGCCGGCTGCGTCGAGAAT
AACGCCTCCTCGACGAAACCCCCCCGGGGTGGCGGGGGTTAGCCTCGCCA
CGGAGGAGGAAGAGAATTCGCCGAGTTGGGTGGCAGCGGATGTGGTGGGA
CGAGAAGGGAAAGTGTCCGGGGAACCCGGGCTTATCAGCAACGATGACGG
CGACGTTTCTCCGGCGATGGCGCCATCATTGGACACAGCTAGAAGTACAT
GTAGGCCTGCGGCGACCTCGGCCGCACCCGCAGATGACCATCCCGCGATG
ATGGCCGGAACGGAGGAGGCGGCGGCGGCGGCGGTAGGAGTAGCCCGAGG
GCAGCCCGAGCTCGCGCCCGAAGCTGCTGGGGCCGCGAGGGTCTCGGACG
CGGCGGCGGCGGCGGTGGGGGTGAGCGGTGGGGGTTGCAGCGGCGGGCGG
TTCGCGCCGCCGCGGCTGCAGCGATCGGGGTCGGTGGTCGTGCAGGAGGA
CAGCGTGATCGAGTTTGTGGACGTGCCTCTCGTCACCCCCACCGGGGAGG
TGCTGATCGAAGCCCTTTCTTTCAAGGTGGAGGCGGGCATGAACGTGTTA
GTGGCGGGACCGAACGGGTCTGGGAAATCTAGCCTATTTCGGGTGCTGGG
GGGCCTGTGGCCGTTGCGAGGAGGCACGCTGTCGAAGCCGCCTACATCTC
GGCTGTTTTACGTTCCCCAGAGGCCCTATTTGGCACTGGGGACCCTGCGG
GACCAAGTGATCTACCCGCATACGCGGCAAGAGGCAGCCTCAAAGGGGGT
CACCGACGCTGACCTGCTATCGGTGTTGGACTCCGTGAGGCTGGGCTACG
TGCTGGACCGGGAGGGGGGCTGGGACGCGGTGCGGGATTGGAGCGATGTC
CTGTCGGGCGGCGAGAAACAGCGGCTGGCTCTCAGCAGGCTCTTCTACCA
CAGGCCGCAGTTCGCCATCCTCGATGAGTGCACAAGCGCCGTTAGCGTCG
ATGTGGAGGGCGACATCTACCGCCTGGCCGCGAGCAGCGGGATCACTCTC
TTCACGGTGTCCCACCGCAAGAGCCTGTGGAAGCACCACGGCTACCTGTT
GCGGTTCGACGGGCTGGGCGGGTACGAGTTCAAGCCCATGTCGGACGTGG
CTGGTGACGAACAGTTTGGTTCCTGA
back to top