mRNA_E_fasciculatus_S2_contig721.15391.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig721.15391.1 vs.
Match: Asn/thr-rich (large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI) HSP 1 Score: 586 bits (1510), Expect = 1.190e-208 Identity = 312/374 (83.42%), Postives = 329/374 (87.97%), Query Frame = 1
Query: 1 MKPASLAVIANLLAAPAAAVEYTVATCADLADVDDAQVTGLTIDTSTFACDEYTRFPVRNAMALKATVPAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGPISCGDGCTTIGAGLSYIVKKGGAIHNKASPRQLSPWGMLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTIVFNGKLTMNDNEADGFFEGLGGGIYNRGDIVVEGESYFSLNTASDGGGIYQTPIGTMTFNGLATFFDNTAFELRGGGLMNNGGMVNFNAGSLFEGNGASGSGDGGLGGAIYNGGGGTVTLTGSTNFTDNWAYWGGAIFTDDGDVEDNEPASVTTFPDDTVFEGNSAE 1122
MK SL +IA+LLAAPAAAVEYTVATCADLADVDD QVT LTID STFACDEYTRF VRNAM LKATVPAVEFGNFSLKVLGELTVEPDV FNGVVDQVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGP+SCGDGCT IG GLSYIVKKGGAIHNK G LTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTI+F KLTM DNEADGFFEG+GG IYNRG+IVVEGES FSLNT+SDGGGIYQT IGTMTFNG ATF +N+A++L GGGLMN+GG+VN NAGSLFE NGASGSGDGGLGGAIYN G VTL GST F +N A+ GGAI+T DGD E+ EPASVTTFPDDTVFE NSAE
Sbjct: 1 MKTVSLTLIASLLAAPAAAVEYTVATCADLADVDDTQVTSLTIDASTFACDEYTRFRVRNAMTLKATVPAVEFGNFSLKVLGELTVEPDVMFNGVVDQVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGPVSCGDGCTRIGRGLSYIVKKGGAIHNK---------GTLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTILFKSKLTMKDNEADGFFEGIGGAIYNRGEIVVEGESLFSLNTSSDGGGIYQTSIGTMTFNGAATFSENSAYDLLGGGLMNDGGVVNINAGSLFELNGASGSGDGGLGGAIYNTNAGVVTLMGSTTFRENAAFMGGAIYTSDGDEENGEPASVTTFPDDTVFEDNSAE 365
BLAST of mRNA_E_fasciculatus_S2_contig721.15391.1 vs.
Match: Asn/thr-rich (large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI) HSP 1 Score: 579 bits (1492), Expect = 6.530e-206 Identity = 307/374 (82.09%), Postives = 326/374 (87.17%), Query Frame = 1
Query: 1 MKPASLAVIANLLAAPAAAVEYTVATCADLADVDDAQVTGLTIDTSTFACDEYTRFPVRNAMALKATVPAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGPISCGDGCTTIGAGLSYIVKKGGAIHNKASPRQLSPWGMLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTIVFNGKLTMNDNEADGFFEGLGGGIYNRGDIVVEGESYFSLNTASDGGGIYQTPIGTMTFNGLATFFDNTAFELRGGGLMNNGGMVNFNAGSLFEGNGASGSGDGGLGGAIYNGGGGTVTLTGSTNFTDNWAYWGGAIFTDDGDVEDNEPASVTTFPDDTVFEGNSAE 1122
MKP SL +IA LLAAPAAAVEYTVATCADLADVDD QVTGLTIDTSTFACDEYTRFPVRN+M LKATV AVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGAT+TFMGTSEFSDNSVAVKQ+G +SCGDGC G GLSY+VKKGGAIHNK G LTFEGDATFERN VHTEDSVEQGKAGAISNTGSGTI F KLTM DNEA+GFFEGLGG IYNRG+I+V+GES FSLNTASDGGGIYQTPIG MTFN +ATF +N+A+ELRGGGLMN GG+VN NAGSLFE NGASGSGDGGLGGAIYNG G VTL GST F +N AY GGAI+TDDG V + E ASVTTFPDDTVFE N A+
Sbjct: 1 MKPCSLTLIAGLLAAPAAAVEYTVATCADLADVDDTQVTGLTIDTSTFACDEYTRFPVRNSMTLKATVAAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGATSTFMGTSEFSDNSVAVKQLGAVSCGDGCERTGRGLSYVVKKGGAIHNK---------GTLTFEGDATFERNAVHTEDSVEQGKAGAISNTGSGTIWFKSKLTMKDNEAEGFFEGLGGAIYNRGEIIVDGESLFSLNTASDGGGIYQTPIGKMTFNSMATFSENSAYELRGGGLMNYGGVVNINAGSLFELNGASGSGDGGLGGAIYNGNEGAVTLMGSTTFRENAAYEGGAIYTDDGSVANGEAASVTTFPDDTVFEDNRAD 365
BLAST of mRNA_E_fasciculatus_S2_contig721.15391.1 vs.
Match: Asn/thr-rich (large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI) HSP 1 Score: 288 bits (736), Expect = 6.340e-93 Identity = 163/259 (62.93%), Postives = 181/259 (69.88%), Query Frame = 1
Query: 346 MGTSEFSDNSVAVKQIGPISCGDGCTTIGAGLSYIVKKGGAIHNKASPRQLSPWGMLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTIVFNGKLTMNDNEADGFFEGLGGGIYNRGDIVVEGESYFSLNTASDGGGIYQTPIGTMTFNGLATFFDNTAFELRGGGLMNNGGMVNFNAGSLFEGNGASGSGDGGLGGAIYNGGGGTVTLTGSTNFTDNWAYWGGAIFTDDGDVEDNEPASVTTFPDDTVFEGNSAE 1122
MGTSEFS+NSVAVKQ G ISCGDGCT GL+YIVKKGGAIHNK G LTF+GDATFERN HTE S ++G GAISNTGSGTI+F KLTM DN+AD F GLGG IYNRG+I+VEG S FSLN A+ GGGI+QT IGTMTFNG+ATF +N A E GGGL NNGG+VN NAGSLFE N AS SGDGG GGAI+N +WGGAI+T+D D P SVTTFPDD AE
Sbjct: 1 MGTSEFSNNSVAVKQFGRISCGDGCTRSERGLTYIVKKGGAIHNK---------GTLTFDGDATFERNVAHTESSNQRGNGGAISNTGSGTILFKSKLTMKDNQADANFAGLGGAIYNRGEIIVEGASLFSLNHAAAGGGIHQTSIGTMTFNGMATFSENFAGEPTGGGLTNNGGVVNINAGSLFEHNWASASGDGGFGGAIFNTKXXXXXXXXXXXXXXXXXHWGGAIYTNDADG----PGSVTTFPDDXXXXXXRAE 246
BLAST of mRNA_E_fasciculatus_S2_contig721.15391.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD4_9PHAE) HSP 1 Score: 236 bits (602), Expect = 3.440e-71 Identity = 161/358 (44.97%), Postives = 195/358 (54.47%), Query Frame = 1
Query: 70 VATCADLADVDDAQVTGLTIDTSTFACDEYTRFPVRNAMALKATVPAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGPISCGDGCTTIGAGLSYIVKKGGAIHNKASPRQLSPWGMLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTIVFNGKLTMNDNEADGFFEGL-GGGIYNRGDIVVEGESYFSLNTASDGGGIYQTPIGTMTFNGLATFFDNTAFELRGGGLMNNGGMVNFNAGSLFEGNGASGSGDGGLGGAIYNGGGGTVTLTGSTNFTDNWAYWGGAIFTDDGD-----VEDNEPASVT-TFPDDTVFEGNSAE 1122
V +C + A +D T +TI + FACDEYTR +R+ M LK++V V F NF+LKV G LTVEPDV F GV KNGGVL + GA F GT+EFSDNS+ I D T I++KGGAIH K G LTFE DATF N ++ G GAIS G+I F GKLTM DNEAD +F G GG I+NRGDIVV+GE+ F+ N GG I+Q T+ FN TF N + GG + N GG V NAGSLF A SGDGGL LTGST F N+ WGGA+F ED T ++P+DT+FE N A+
Sbjct: 26 VGSCTEFAAIDRKVETEVTITEADFACDEYTRLSIRSNMVLKSSVGKVTFSNFALKVYGSLTVEPDVVFTGVSLVEKNGGVLKLELGAVGVFKGTAEFSDNSIISTSI------DESTE-----EEILRKGGAIHTK---------GSLTFEKDATFSGN-LNDRLYYGSGPGGAISVHVKGSIYFMGKLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGGRGGAIFQEKWATLVFNDFVTFTSNKCLDTFGGTIANIGGDVTANAGSLFFDGFAENSGDGGLXXXXXXXXXXXXXLTGSTTFRQNYGNWGGAVFNSAVPNAYFTAEDESYVMPTISYPEDTIFEDNDAQ 362
BLAST of mRNA_E_fasciculatus_S2_contig721.15391.1 vs.
Match: Polymorphic (outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG1_ECTSI) HSP 1 Score: 202 bits (513), Expect = 1.340e-60 Identity = 109/160 (68.12%), Postives = 124/160 (77.50%), Query Frame = 1
Query: 643 MNDNEADGFFEGLGGGIYNRGDIVVEGESYFSLNTASDGGGIYQTPIGTMTFNGLATFFDNTAFELRGGGLMNNGGMVNFNAGSLFEGNGASGSGDGGLGGAIYNGGGGTVTLTGSTNFTDNWAYWGGAIFTDDGDVEDNEPASVTTFPDDTVFEGNSAE 1122
MN+N+ DG + GLGG IYNRG+I VEGES FS N +SDGGGIYQT IG MTFN +ATFF N A LRGGGLMN+GG+VN NAGSLFE N A+ + DGG GGAI+N GG VTL G T F +N A+WGGAI+TDDG PASVTTFPDDTVFE NSA+
Sbjct: 1 MNENDTDGQYGGLGGAIYNRGEITVEGESLFSENRSSDGGGIYQTSIGIMTFNSMATFFHNVAENLRGGGLMNDGGVVNINAGSLFEQNFAAANADGGRGGAIHNRNGGVVTLMGPTTFRENGAWWGGAIYTDDG-----YPASVTTFPDDTVFEDNSAD 155
BLAST of mRNA_E_fasciculatus_S2_contig721.15391.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG2_ECTSI) HSP 1 Score: 161 bits (408), Expect = 9.570e-46 Identity = 87/107 (81.31%), Postives = 90/107 (84.11%), Query Frame = 1
Query: 1 MKPASLAVIANLLAAPAAAVEYTVATCADLADVDDAQVTGLTIDTSTFACDEYTRFPVRNAMALKATVPAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSV 321
MKP SL IA+LLA PAAAVEY V TCADLADVDD QVTGLTID +TFACDEYTRF VRN+M LKATV AVEFGNFSLKVLGELTVEPDVTFNGVVDQ G SV
Sbjct: 1 MKPVSLTFIASLLATPAAAVEYMVTTCADLADVDDTQVTGLTIDANTFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVDQSSEGTTPSV 107
BLAST of mRNA_E_fasciculatus_S2_contig721.15391.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE5_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 3.580e-11 Identity = 79/291 (27.15%), Postives = 124/291 (42.61%), Query Frame = 1
Query: 76 TCADL-ADVDDAQVTGLTIDTSTFA---CDEYTRFPVR-NAMALKATVPAVEFGNFSLKVLGELTV--------EPDVTFNG--VVDQVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGPISCGDGCTTIGAGLSYIVKKGGAIHNKASPRQLSPWGMLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTIVFNGKLTMNDNEADGFFEGLGGGIYNRGDIVVEGESYFSLNTASDGGGIYQTPIGTMTF-NGLATFFDNTAFELRGGGLMNNGGMVNFNAGSLF 900
TC DL A + Q + ++ FA C+ +T + N++ + ++ F S V L V E +V F G D + +GG + V EG+T F+ N V ++ I I+ D + S V+ GG + G +G+ATF ++ G GA+ +G+++FNG +T+ D F G GGGIYN G + ++G+S F +AS G IY T F +G FF + G + N G F+ +LF
Sbjct: 105 TCDDLLAAFEQTQTEDVVVEMHPFADIECETFTNMTMTSNSLTVSSSENIDNFSGSSSLVNVRLDVTNGAKLFWETNVIFEGDEETDLMVDGGAVYVGEGSTVRFL-------NDVQMQDIAIINERDEDSD----FSSFVRSGGCVWTA---------GYFRVDGEATFTGCDISGAGESPPGPGGAVYVGETGSVLFNGGVTITDTHITDDFGGSGGGIYNLGKVNIKGDSRFEDISASSGVAIYNGEGATFNFRSGARAFFKDLNNRDSEGSALFNRGFFKFSGPALF 375
BLAST of mRNA_E_fasciculatus_S2_contig721.15391.1 vs.
Match: hypothetical (protein n=1 Tax=Methanocorpusculum bavaricum TaxID=71518 RepID=UPI000693ABF4) HSP 1 Score: 55.1 bits (131), Expect = 8.070e-5 Identity = 41/136 (30.15%), Postives = 63/136 (46.32%), Query Frame = 1
Query: 433 AGLSYIVKKGGAIHNKASPRQLSPWGMLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTIVFNGKLTMNDNEADGFFEGLGGGIYNRGDIVVEGESYFSLNTASDGGGIYQTPIGTMTFNGLATFFD-NTAFE 837
AG ++++K G +A R SP +L G + + + A + T NG L + +N + + GGG++N GDI+++GE S NTA GGGIY + GT+ N + NTA E
Sbjct: 121 AGGTFVIKDSGGSIQRAPGRSDSPLLVLGSSGGLHIISGALKLDGMGQDSGAPLLEITSGAVFDINGNLILQNN-VNRYDIMPGGGLWNNGDIILDGEITISGNTAPKGGGIYNS--GTLELNSNKIYITGNTATE 253 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig721.15391.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig721.15391.1 >prot_E_fasciculatus_S2_contig721.15391.1 ID=prot_E_fasciculatus_S2_contig721.15391.1|Name=mRNA_E_fasciculatus_S2_contig721.15391.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=374bp MKPASLAVIANLLAAPAAAVEYTVATCADLADVDDAQVTGLTIDTSTFACback to top mRNA from alignment at E_fasciculatus_S2_contig721:4992..10923- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig721.15391.1 ID=mRNA_E_fasciculatus_S2_contig721.15391.1|Name=mRNA_E_fasciculatus_S2_contig721.15391.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5932bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig721:4992..10923- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig721:4992..10923- >mRNA_E_fasciculatus_S2_contig721.15391.1 ID=mRNA_E_fasciculatus_S2_contig721.15391.1|Name=mRNA_E_fasciculatus_S2_contig721.15391.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1122bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig721:4992..10923- (Ectocarpus fasciculatus EfasUO2)back to top |