mRNA_E_fasciculatus_S2_contig7176.15353.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7176.15353.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU07_ECTSI) HSP 1 Score: 129 bits (323), Expect = 6.220e-35 Identity = 66/85 (77.65%), Postives = 73/85 (85.88%), Query Frame = 3
Query: 3 ETMMKIMTSTSALQQSAVGADCDDERSLDAIARGADWGKAWERKQFPMDPSTCTFWCAIALGALAKGSPIESVSKYAELAQEARA 257
ETM+KIM S ++LQQSAV ADCDDERS DAIARGA W +A ER Q P DPSTCTFWCAIALGALA+GSPI+SV KY+ELAQEA A
Sbjct: 27 ETMVKIMRSPASLQQSAVEADCDDERSYDAIARGAHWIQASERNQLPRDPSTCTFWCAIALGALAEGSPIQSVYKYSELAQEALA 111
BLAST of mRNA_E_fasciculatus_S2_contig7176.15353.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI7_ECTSI) HSP 1 Score: 101 bits (252), Expect = 2.440e-24 Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 3
Query: 9 MMKIMTSTSALQQSAVGADCDDERSLDAIARGADWGKAWERKQFPMDPSTCTFWCAIALGALAKGSPIESVSKYAELAQEARA 257
M+KIMT+ LQ SAVG D ++ DAI RGADW KA E Q PM+PS+CTFWCAIALGAL KG PI SV+KY++LA EA A
Sbjct: 29 MVKIMTT---LQSSAVGGDFGEQGRFDAIVRGADWSKASEGHQIPMNPSSCTFWCAIALGALVKGHPIGSVTKYSQLAHEALA 108
BLAST of mRNA_E_fasciculatus_S2_contig7176.15353.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV1_ECTSI) HSP 1 Score: 102 bits (253), Expect = 5.230e-24 Identity = 53/86 (61.63%), Postives = 62/86 (72.09%), Query Frame = 3
Query: 3 ETMMKIMTSTSALQQSAVGADCDDE-RSLDAIARGADWGKAWERKQFPMDPSTCTFWCAIALGALAKGSPIESVSKYAELAQEARA 257
ETM+ IM ++ QQS G DCD+ +A+A G D K R QFPMDPS CTFWCA+ALGALAKGSPIESV+ YA+LAQEA A
Sbjct: 50 ETMVTIMLPRASSQQSVFGDDCDEGGHYFEAVAPGGDLSKTSARNQFPMDPSACTFWCAVALGALAKGSPIESVTSYAQLAQEALA 135
BLAST of mRNA_E_fasciculatus_S2_contig7176.15353.1 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU13_ECTSI) HSP 1 Score: 102 bits (253), Expect = 1.350e-23 Identity = 52/85 (61.18%), Postives = 63/85 (74.12%), Query Frame = 3
Query: 3 ETMMKIMTSTSALQQSAVGADCDDERSLDAIARGADWGKAWERKQFPMDPSTCTFWCAIALGALAKGSPIESVSKYAELAQEARA 257
E M++IM + + LQ+ AVG CD+E DAIARG D A E Q PM+P +CTFWCAIALGALAKGSP ESV+KY++LA EA A
Sbjct: 145 EAMVQIMATPATLQRPAVGGGCDEEALFDAIARGEDLINASEGHQHPMNPRSCTFWCAIALGALAKGSPFESVAKYSQLAHEALA 229
BLAST of mRNA_E_fasciculatus_S2_contig7176.15353.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU05_ECTSI) HSP 1 Score: 102 bits (253), Expect = 1.730e-23 Identity = 56/74 (75.68%), Postives = 60/74 (81.08%), Query Frame = 3
Query: 3 ETMMKIMTSTSALQQSAVGADCDDERSLDAIARGADWGKAWERKQFPMDPSTCTFWCAIALGALAKGSPIESVS 224
ETM+KIMT S+LQQSAVGAD ERS+D A GA+ KA ER Q PMDPSTCTFWCAIALGALAKGSPIES S
Sbjct: 27 ETMVKIMTPPSSLQQSAVGAD---ERSVDTNAPGANLIKASERNQLPMDPSTCTFWCAIALGALAKGSPIESTS 97
BLAST of mRNA_E_fasciculatus_S2_contig7176.15353.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K642_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 1.520e-22 Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 3
Query: 9 MMKIMTSTSALQQSAVGADCDDERSLDAIARGADWG-KAWERKQFPMDPSTCTFWCAIALGALAKGSPIESVSKYAELAQEARA 257
M+K+MT LQ SAVG D D+ DA+A+GADW K E Q PM+PS+CTFWCAIALGAL KG PIES +KY++LA EA A
Sbjct: 1 MVKVMT---ILQPSAVGGDFGDQGRFDAMAQGADWSSKVSEGHQIPMNPSSCTFWCAIALGALVKGRPIESGTKYSQLAHEALA 81
BLAST of mRNA_E_fasciculatus_S2_contig7176.15353.1 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 2.690e-22 Identity = 50/83 (60.24%), Postives = 60/83 (72.29%), Query Frame = 3
Query: 3 ETMMKIMTSTSALQQSAVGADCDDERSLDAIARGADWGKAWERKQFPMDPSTCTFWCAIALGALAKGSPIESVSKYAELAQEA 251
ETM++IM S + LQQSA+G C + + + R W +A ER Q PMD STCTFWCAIALGALAKGSP+ESV+KY LA EA
Sbjct: 150 ETMVRIMASPAPLQQSAIGGACSE---VGTMVRAPCWNEASERNQLPMDASTCTFWCAIALGALAKGSPVESVAKYRHLAHEA 229
BLAST of mRNA_E_fasciculatus_S2_contig7176.15353.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW5_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 2.200e-21 Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 3
Query: 3 ETMMKIMTSTSALQQSAVGADCDDE-RSLDAIARGADWGKAWERKQFPMDPSTCTFWCAIALGALAKGSPIESVSKYAELAQEARA 257
ETM+KIM ++ QQ +G DCD+ +A+ARG D K + PMDPS CTFWCA+ALGALAKGSPIESV+ YA LAQ A A
Sbjct: 27 ETMVKIMLPPASSQQPVLGDDCDEGGHYFEAVARGGDLSKTSAGNRLPMDPSACTFWCAVALGALAKGSPIESVTSYARLAQAALA 112
BLAST of mRNA_E_fasciculatus_S2_contig7176.15353.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU09_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 2.210e-21 Identity = 50/83 (60.24%), Postives = 59/83 (71.08%), Query Frame = 3
Query: 3 ETMMKIMTSTSALQQSAVGADCDDERSLDAIARGADWGKAWERKQFPMDPSTCTFWCAIALGALAKGSPIESVSKYAELAQEA 251
ETM+KIM S + LQQSA+G + ++ R W KA E+ Q PMDPSTCTFWCAIALGALAKG P+ESV+KY LA EA
Sbjct: 46 ETMVKIMASPAPLQQSAIGGAFG---GVGSMVRARCWNKASEKPQLPMDPSTCTFWCAIALGALAKGCPVESVAKYRHLAHEA 125
BLAST of mRNA_E_fasciculatus_S2_contig7176.15353.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG4_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 4.330e-21 Identity = 49/82 (59.76%), Postives = 60/82 (73.17%), Query Frame = 3
Query: 9 MMKIMTSTSALQQSAVGADCDDE-RSLDAIARGADWGKAWERKQFPMDPSTCTFWCAIALGALAKGSPIESVSKYAELAQEA 251
M+KIM ++ QQ A+G DCD+ L A+A G D GKA R Q DPS CTFWCA+ALGALAKG+PIESV+ YA+LA+EA
Sbjct: 1 MVKIMLPPASFQQPALGDDCDEGGHYLKAVAPGGDLGKAPARNQLAKDPSACTFWCAVALGALAKGNPIESVTSYAQLAEEA 82 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7176.15353.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7176.15353.1 >prot_E_fasciculatus_S2_contig7176.15353.1 ID=prot_E_fasciculatus_S2_contig7176.15353.1|Name=mRNA_E_fasciculatus_S2_contig7176.15353.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=83bp MMKIMTSTSALQQSAVGADCDDERSLDAIARGADWGKAWERKQFPMDPSTback to top mRNA from alignment at E_fasciculatus_S2_contig7176:865..1296- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7176.15353.1 ID=mRNA_E_fasciculatus_S2_contig7176.15353.1|Name=mRNA_E_fasciculatus_S2_contig7176.15353.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=432bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7176:865..1296- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7176:865..1296- >mRNA_E_fasciculatus_S2_contig7176.15353.1 ID=mRNA_E_fasciculatus_S2_contig7176.15353.1|Name=mRNA_E_fasciculatus_S2_contig7176.15353.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=249bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7176:865..1296- (Ectocarpus fasciculatus EfasUO2)back to top |