mRNA_E_fasciculatus_S2_contig7172.15350.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7172.15350.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L164_9PHAE) HSP 1 Score: 495 bits (1275), Expect = 4.620e-169 Identity = 236/245 (96.33%), Postives = 242/245 (98.78%), Query Frame = 1
Query: 1 EVPGDESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPIKQRLHGLPQSQAGERVGFFAYYQMEAVEELVDVISMQDFLGRESKNLGKLPPANLLEKPADLWNFFEGDSVRNLTWPAWEVSKKALVFPSSPGKPLPLEDQGFVQRLQDFLNTRQPVTYDEDAWNSKVIHFSGDCHDSRAEGSKNRRPLIHFYAFMLHADTLVDSRVKRFARDRLRYRDRIFCKASQV 735
EVPGDESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPP+KQRLHGLPQSQAGERVGFFAYYQMEAVEELVDVISMQDFLGRESKNLGKLPPANLLEKPADLWNFFEGDSVRNLTWPAWEV+KKALVFPSSPGKPLPLEDQGF+QRL DFLNTRQ +TYDEDAWNSKVIHFSGDCHD+RAEGSKNRRPLIHFYAFMLHAD LVDSRVKRFARDRLRYRDRIFCKASQ+
Sbjct: 346 EVPGDESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPVKQRLHGLPQSQAGERVGFFAYYQMEAVEELVDVISMQDFLGRESKNLGKLPPANLLEKPADLWNFFEGDSVRNLTWPAWEVTKKALVFPSSPGKPLPLEDQGFLQRLHDFLNTRQAITYDEDAWNSKVIHFSGDCHDNRAEGSKNRRPLIHFYAFMLHADKLVDSRVKRFARDRLRYRDRIFCKASQI 590
BLAST of mRNA_E_fasciculatus_S2_contig7172.15350.1 vs.
Match: GDP-fucose (protein O-fucosyltransferase, family GT65 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR32_ECTSI) HSP 1 Score: 427 bits (1099), Expect = 5.390e-148 Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 1
Query: 106 MAFETVVVFAYVTGRTLVMPPIKQRLHGLPQSQAGERVGFFAYYQMEAVEELVDVISMQDFLGRESKNLGKLPPANLLEKPADLWNFFEGDSVRNLTWPAWEVSKKALVFPSSPGKPLPLEDQGFVQRLQDFLNTRQPVTYDEDAWNSKVIHFSGDCHDSRAEGSKNRRPLIHFYAFMLHADTLVDSRVKRFARDRLRYRDRIFCKASQV 735
MAFETVVVFAYVTGRTLVMPP+KQRLHGLPQSQAGERVGFFAYYQMEAVEELVDVISMQDFLGRESKNLGKLPPANLLEKPADLWNFFEGDSVRNLTWPAWEVSKKALVFPSSPGKPLPLEDQGFVQRLQDFLNTRQ VTYDEDAWNSKVIHFSGDCHDSRAEGSKNRRPLIHFYAFMLHADTLVDSRVKRFARDRLRYRDRIFCKASQ+
Sbjct: 1 MAFETVVVFAYVTGRTLVMPPVKQRLHGLPQSQAGERVGFFAYYQMEAVEELVDVISMQDFLGRESKNLGKLPPANLLEKPADLWNFFEGDSVRNLTWPAWEVSKKALVFPSSPGKPLPLEDQGFVQRLQDFLNTRQAVTYDEDAWNSKVIHFSGDCHDSRAEGSKNRRPLIHFYAFMLHADTLVDSRVKRFARDRLRYRDRIFCKASQI 210
BLAST of mRNA_E_fasciculatus_S2_contig7172.15350.1 vs.
Match: Fucosyltransferase (n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3X1_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.120e-49 Identity = 106/248 (42.74%), Postives = 146/248 (58.87%), Query Frame = 1
Query: 7 PGDESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPIKQRLHGLPQ-SQAGERVGFFA-YYQMEAVEELVDVISMQDFLGRESK--NLGKLPPANLLEKPAD-LWNFFEGDSVRNLTWPAWEVSKKALVFPSSPGKPLPLEDQGFVQRLQDFLNTRQPVTYDEDAWNSKVIHFSGDCHDSRAEGSKNRRPLIHFYAFMLHADTLVDSRVKRFARDRLRYRDRIFCKASQV 735
P E V+P+++LGP KYVTFEPD GWNN+RMA E V+VFAY TGRTLVMPP +Q ++ L + S G+ FA ++ + ++E +++I M+DFL E+ NLG LPP+N + D LW + EG V W ++V L FP +PGKP+ +RL++F R PV Y+E ++KVIHF +GS R L HFY F D +D VKRF R + YRD +FC A ++
Sbjct: 164 PDLEKVVNPWAALGPEKKYVTFEPDRGGWNNIRMAMEVVLVFAYATGRTLVMPP-EQNMYLLNKGSDPGDNTLHFADFFYLHRLQEKMEMIEMKDFLETEAVTGNLGALPPSNSTDLRRDVLWKYLEGLEVGTTHWKPFDV---CLAFPETPGKPIEDHSAEQQERLKEFCGKRTPVHYNETLQDAKVIHFGA------GQGS---RVLAHFYTFEHFMDPALDRAVKRFVRSYIHYRDEVFCAAGRI 398
BLAST of mRNA_E_fasciculatus_S2_contig7172.15350.1 vs.
Match: Uncharacterized (protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S0N0_9ARCH) HSP 1 Score: 133 bits (335), Expect = 1.460e-32 Identity = 89/254 (35.04%), Postives = 126/254 (49.61%), Query Frame = 1
Query: 31 PYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPIKQRLHGLPQSQAGERVGFFA-YYQMEAVEELVDVISMQDFLGRE---------SKNLGKLPPANLL-------EKPADLWNFFEGDSVRNLTWPAWEVSKKALVFPSSPGKPLPLED--QGFVQRLQDFLNTRQPVTYDEDAWNSKVIHFSGDCHDSRAEGSKNRRPLIHFYAFMLHADTLVDSRVKRFARDRLRYRDRIFCKASQV 735
PY GP KYVTFEPD GWNN+RM E V+VFAY TGRTLV+PP Q ++ L + ++ FA ++ E ++E + VI+M++FL RE S +L + PP N E+ +W + S P W+ + LV PS P D + QRL F R + YD+D N +HF ++ R L HFY F+ + ++ KRF RD + Y+ IFCKA+ +
Sbjct: 91 PYIDYGPRVKYVTFEPDVGGWNNIRMQMELVLVFAYATGRTLVLPP-DQPMYLLQAGKGHQKAHSFADFFPFEKIQERMSVITMEEFLQREAVAGHLRNRSTHLVQFPPGNKTVFNTMEREERWAMWAYLRDVSA----CPPWKSMHEFLVIPSGPHDNRSATDLSEPEQQRLAAFAANRTAMYYDDDWQNEPYLHFI-------SKPELGYRLLEHFYTFIYFENQEMERFFKRFVRDYVHYQREIFCKAALI 332
BLAST of mRNA_E_fasciculatus_S2_contig7172.15350.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSB5_9STRA) HSP 1 Score: 126 bits (317), Expect = 8.700e-30 Identity = 89/245 (36.33%), Postives = 127/245 (51.84%), Query Frame = 1
Query: 43 LGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPIKQRLHGL--PQSQAGERVGFFAYYQMEAVEEL--VDVISMQDFLGRE-SKNLGKLPPANLLEKPADLWNFFEGDSVRNLTWPAWEVSKKALVFPSSPGKPLPLEDQGFVQR---------LQDFLNTRQPVTYDEDAWNSKVIHFSGDCHDSRAEGSKNRRPLIHFYAFMLHADTLVDSRVKRFARDRLRYRDRIFCKASQV 735
LGP KYVTFE D AGWNN RM E V++FA +TGRTLVMPP +QR++ L ++ A R+ F ++ +E V L + VI+ ++FL RE ++N G L + ++L + E + AW + LV P G LP E G V ++ +L R+ + Y + + +IH+ ++ R L HFY F H+ VD KR RD + YRD +FCKASQV
Sbjct: 165 LGPERKYVTFEADTAGWNNKRMGMEAVLIFASLTGRTLVMPP-EQRIYQLNHDRAAANARLDFSDFFPLERVTALHRLSVITTEEFLAREGAQNAGSTLRIELSKAASEL-SAVEAARLLEKVAGAWGEAALPLVRPGRQGYVLPFEAGGRVNLTDPRYADGDVERWLAGRELLEYTPEMQAAPIIHWR----------ARESRLLTHFYTFARHSAPAVDRYHKRLMRDLMHYRDEMFCKASQV 397
BLAST of mRNA_E_fasciculatus_S2_contig7172.15350.1 vs.
Match: Hypothetical (protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S7ZGN1_9STRA) HSP 1 Score: 125 bits (313), Expect = 3.920e-29 Identity = 93/287 (32.40%), Postives = 135/287 (47.04%), Query Frame = 1
Query: 4 VPGDESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPIKQRLHGLPQSQAGER--------------------VGFFAYYQMEAVEELVDVISMQDF------------LGRESKNLGKLPPAN--LLEKPADLWNFFEGDSVRNLTWPAWEVSKKALVFPSSPGKPLPLEDQGFVQRLQDFLNT---------RQPVTYDEDAWNSKVIHFSGDCHDSRAEGSKNRRPLIHFYAFMLHADTLVDSRVKRFARDRLRYRDRIFCKASQV 735
+P D+ W SPY +LGP KY+ FEPD GWNN+R+ FE + A+ TGRT V+PP + R++ L +S ++ GF + ME + E + VI+M++F L R + L KL N L K + L ++ + SV+ P W SK + FP L +G + + LN R+PV YDE+ WNSKV+ FS C + R L+ FY+ + AD D +KRF RD L Y I C +++
Sbjct: 159 LPKDKVWESPYKNLGPKNKYLLFEPDEGGWNNLRLGFEANLALAFATGRTFVLPP-RDRVYLLKKSSQQQKEKLNKLFKSDTNLISARSPVYGFEDIFAMEPLRERMRVITMEEFIREVINDPSNNELPRPQEELIKLVQENKFLSWKNSLLRSWIQRISVQ----PKWNPSKVFVAFPQRDR----LHKEGIEKFTDNQLNVGMRPWKKRRREPVFYDEELWNSKVLLFS-QCRGAPC------RMLVQFYSLLYFADEKDDKMLKRFIRDHLHYSSDILCTGARI 429
BLAST of mRNA_E_fasciculatus_S2_contig7172.15350.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZW72_TRICV) HSP 1 Score: 122 bits (306), Expect = 2.490e-28 Identity = 89/279 (31.90%), Postives = 130/279 (46.59%), Query Frame = 1
Query: 1 EVPGDESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPIKQRLHGLPQSQAGERVGFFAYYQMEAVEELVDVISMQDFLGRESKNLGKL---------PPANLLEKPADLWNFFEGDSVRNLTW-PAWEVSKKALVFPSSPGKPLPLE------------------------DQGFVQRLQDFLNTRQPVTYDEDAWNSKVIHFSGDCHDSRAEGSKNRRPLIHFYAFMLHADTLVDSRVKRFARDRLRYRDRIFCKASQV 735
++ GD + SP+ G KY+TFE D GWNN+RMA ET+V A+ GRTLV+ P K ++ QS+ FF + + +DV++M +FL +E+ +G L PP N D +F + +R + + P W FPSS G L+ D V+R+++FL R YDE+ + ++HF D SK R L+HFYAF+ D D +KR RD LRY D + C A++V
Sbjct: 94 DIRGDTEFASPFKEEG-EVKYLTFEHDLGGWNNMRMAMETMVALAHAMGRTLVLLP-KTKI--FLQSEGKSYTDFFHLEALGKEHKGIDVVTMDEFLQQEAV-IGNLKDKNGNPAFPPGNRTNWDGDRHHFAQ--YLRKVAYTPEWRYENCIAAFPSSSGNSTSLKANHAAAQKMGAPKGEKWGKEPLAVDAPTVERMREFLLGRSLCIYDEEMQKAPIVHFMVD-------SSKKLRYLVHFYAFLFFEDWHHDLHLKRLIRDHLRYNDELQCAAARV 358
BLAST of mRNA_E_fasciculatus_S2_contig7172.15350.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC39_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.570e-27 Identity = 80/240 (33.33%), Postives = 119/240 (49.58%), Query Frame = 1
Query: 46 GPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPIKQRLHGLPQSQAGERVGFFAYYQMEAVE--ELVDVISMQDFLGR---ESKNLGKLPPANLLEKPAD-LWNFFE---GDSVRNLTWPAWEVSKKALVFPSSPGKPLPLEDQGFV--QRLQDFLNTRQPVTYDEDAWNSKVIHFSGDCHDSRAEGSKNRRPLIHFYAFMLHADTLVDSRVKRFARDRLRYRDRIFCKASQ 732
GP +YVTFE D GWNN+RM ETVV FA +TGRTLV+PP+ HGL GE + YY + + + ++ ++L R ++ LG +P E D ++ F+E G L P + A+VFP G+ + + D + + D+L R+ + YD ++VIH+S + R L ++ F+ H D V+ R RD + YRD +FCKASQ
Sbjct: 799 GPREQYVTFEMDWGGWNNIRMGVETVVAFASMTGRTLVLPPV----HGLYLQNGGEPLALTDYYSPDLINYPNRLATVTTHEYLARMDADNGGLGVMPDKPTAEMDHDDIYKFYEKVAGQYAAGL--PELNCGQTAIVFPDKAGEVIDMGDPRYSGNKDFTDWLAEREIIQYDSRWQEARVIHWS----------NARTRLLTIYHTFLYHMDPSVNRYQMRLIRDMMHYRDEVFCKASQ 1022
BLAST of mRNA_E_fasciculatus_S2_contig7172.15350.1 vs.
Match: Uncharacterized (protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHK3_9STRA) HSP 1 Score: 119 bits (299), Expect = 2.590e-27 Identity = 84/286 (29.37%), Postives = 140/286 (48.95%), Query Frame = 1
Query: 1 EVPGDESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPIKQRLHGLPQSQAGER-----VGFFAYYQMEAVEELVDVISMQDFLGRESK--NLGK-----LPPANLLEKPADL------WNFFEGDSVRNLTWPA-WEVSKKALVFPSSPGKPLPLEDQGFVQRL----------QDFLNTRQPVT-------YDEDAWNSKVIHFSGDCHDSRA-----EGSKNRRPLIHFYAFMLHADTLVDSRVKRFARDRLRYRDRIFCKASQV 735
++P D + SPY++ G + KY+TFEPD GWNN+RM+ ET A+ GR LV+P +Q ++ L Q + E FF + ++ A + V+VI+M++F+ RE N+ K PP+N + + W++ +RN+T + W+ SK VFP PGK E + + + + ++N PV + ++ ++ ++ S+ + + R L+HFYAF+ D D KR+ RD LRY D I C A+++
Sbjct: 96 DIPSDSHFASPYANYGESPKYLTFEPDEGGWNNIRMSMETATALAHAMGRILVLP-FEQNMYLLKQDKKKENNRFTFKNFFPFDEISAEHKGVEVITMEEFMQREVMPGNIQKDGKVQFPPSNQTDWEGHIRDGKAFWHW-----LRNVTLASTWDFSKCTAVFPKEPGKKAADEMEKLYETMDMSEQSHGIFKKYINKPTPVNGTVTDRLKEMLSFRKEICLYNDQMQKSKVMHFMGDNNSGARLLVHFYAFLFFEDWEQDLWTKRYVRDHLRYIDEIQCAAAKI 375
BLAST of mRNA_E_fasciculatus_S2_contig7172.15350.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SM68_9STRA) HSP 1 Score: 119 bits (297), Expect = 5.970e-27 Identity = 84/252 (33.33%), Postives = 116/252 (46.03%), Query Frame = 1
Query: 16 ESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPIKQRLHGLPQSQAGE---RVGFFAYYQMEAVEELVDVISMQDFLGRESKNLGKLPPANLLEKPADLWNFFEGDSVRNLTW--------PAWEVSKKALVFPSSPGKPLPLEDQGFVQRLQDFLNTRQPVTY-DEDAWNSKVIHFSGDCHDSRAEGSKNRRPLIHFYAFMLHADTLVDSRVKRFARDRLRYRDRIFCKASQV 735
E+ SPY+ GP KY+TFEPD GWNN+RMAFET+ V A+ TGR LVMPP QRL+ L + AG G A+ +A+ ++VIS+ FL KN L + A +R W P W K+ + F P ++ F + V Y D+ + +H + S R H+Y F+L D + D KRF RDRL+Y+D +FC A +V
Sbjct: 154 ETHASPYAGYGPKRKYLTFEPDAGGWNNIRMAFETLAVLAHATGRVLVMPP-PQRLYLLKVTHAGNTRAHHGVDAFLDFDALRGALEVISISQFLNETIKNDNTRRHLKGLAERATNGGVIARRQLRE--WMRRHADVEPRWAPLKECVAF-----GPCSTHNKYRHLTADKFCTHTRRVRYVDQRFAGAPWVHMT-------TNASHGYRMFTHWYTFLLFDDGVTDLYYKRFGRDRLKYKDEVFCAAGRV 390 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7172.15350.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7172.15350.1 >prot_E_fasciculatus_S2_contig7172.15350.1 ID=prot_E_fasciculatus_S2_contig7172.15350.1|Name=mRNA_E_fasciculatus_S2_contig7172.15350.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=250bp EVPGDESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRback to top mRNA from alignment at E_fasciculatus_S2_contig7172:5024..7616+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7172.15350.1 ID=mRNA_E_fasciculatus_S2_contig7172.15350.1|Name=mRNA_E_fasciculatus_S2_contig7172.15350.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2593bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7172:5024..7616+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7172:5024..7616+ >mRNA_E_fasciculatus_S2_contig7172.15350.1 ID=mRNA_E_fasciculatus_S2_contig7172.15350.1|Name=mRNA_E_fasciculatus_S2_contig7172.15350.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=750bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7172:5024..7616+ (Ectocarpus fasciculatus EfasUO2)back to top |