mRNA_E_fasciculatus_S2_contig7167.15343.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7167.15343.1
Unique NamemRNA_E_fasciculatus_S2_contig7167.15343.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7167.15343.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR7_ECTSI)

HSP 1 Score: 601 bits (1550), Expect = 4.040e-210
Identity = 348/367 (94.82%), Postives = 358/367 (97.55%), Query Frame = 1
Query:  514 MDFTFARFALNMAMASSRTEPDVMLKAGAPAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGGVPPLVLLCFTSQSPAVLVQACISIAQLSRYAPNRAIIAAKGGIAAMVRLLEGFRREERVTEQVIGQALTALVNVTYRSDANRGLVEECGATHPTITIMDALDNEVVLVQACLALANMAYGNQFAALRLLEAGADKAACDLIRDSDKTRHSDVMKAAFICIANLANNPLNQAHVGAGDSVELALSVCKHCQSARVVRSAARALCSLTLKNQANKTRCASLDAVSILLELAAAWGVAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAASCVAILMQHPTNALAMKRGGGVRE 1614
            MDFTFARFALNMA+ASSRTEP+VMLKAGAPAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGG+PPLVLLCFTSQSPAVLVQACISIAQLSRY PNRAIIAAKGG+AAMVRLLEGFRRE+ VTEQVIGQALTALVNVTYRSDANRGLVEECGAT PTITIMDALDNEVVLVQACLALANMAY NQFAALRLLEAGADKAACDLIRDSDKTRHSDV++AAFIC+ANLANNPLNQAHVGAGDSVELALSVCKHCQSARVVRSAARALCSLTLKNQANKTRCASLDAVSILLELAAAWGVAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    QAASCVAILMQHPTNALAMKR GG++E
Sbjct:    1 MDFTFARFALNMAIASSRTEPEVMLKAGAPAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGGIPPLVLLCFTSQSPAVLVQACISIAQLSRYPPNRAIIAAKGGVAAMVRLLEGFRREDHVTEQVIGQALTALVNVTYRSDANRGLVEECGATLPTITIMDALDNEVVLVQACLALANMAYLNQFAALRLLEAGADKAACDLIRDSDKTRHSDVIEAAFICLANLANNPLNQAHVGAGDSVELALSVCKHCQSARVVRSAARALCSLTLKNQANKTRCASLDAVSILLELAAAWGVAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAGQAASCVAILMQHPTNALAMKRAGGLKE 367          
BLAST of mRNA_E_fasciculatus_S2_contig7167.15343.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNI0_AURAN)

HSP 1 Score: 87.4 bits (215), Expect = 3.570e-15
Identity = 90/306 (29.41%), Postives = 127/306 (41.50%), Query Frame = 1
Query:  406 EAKQTADSEREEKAILCQWLNG------------RVIFCSSSEPRLSSMDFTFARFALNMA-----MASSRTEPDVMLKAGAPAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGGVPPLVLLCFTSQSPAVLVQACISIAQLSRYAPNRAIIAAKGGIAAMVRLLEGFR---------------------------REERVTEQVIGQALTALVNVTYRSDANRGLVEECGATHPTITIMDALDNEVVLVQACLALANMAYGNQFAALRLLEAGADKAACDLIRDSDKTRHSDVMKAA 1191
            EA   A+ ER EK++L QWL G             + F       L ++DF F R+ALN         +S T   +  +  AP   +  L++   LV GP+++AL+ +A  +   RA                +Q  A     C +I  L+  A NR  IAA  GI+ +V+LL   R                            + RVTE V   AL A  N+T  S+ANR LV E G   P +           +  A  A+AN+AYG+ FA  + L A AD A C  I   D      +++AA
Sbjct:   44 EAAFIAEKERSEKSLLAQWLQGFAHSLYKGPSTSGLEFALEVGLGLDAIDFAFCRYALNFREFRKYWLASLTVLILRWQLAAP---INALSDAAALVCGPSLMALTHLAQKDGPARAA------------IAEAQDCA-----CHAIGALALLAENRIRIAAANGISILVKLLSMARPPPILAADAANDLVCASSVYRVPKDANEDLRVTEAVQEAALVAFTNLTNSSEANRQLVAELGGVTPMVVCALFARGGAPVRNAAQAIANVAYGSNFAVAKCLMARADVAMCSAISAVDLLCEDSLLEAA 329          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7167.15343.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized4.040e-21094.82protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.570e-1529.41protein n=1 Tax=Aureococcus anophagefferens TaxID=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7167contigE_fasciculatus_S2_contig7167:1224..7817 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score602.4
Seed ortholog evalue2e-169
Seed eggNOG ortholog2880.D7FZR7
Model size1614
Hectar predicted targeting categoryother localisation
Exons11
EggNOG OGs28NP6@1,2QV8V@2759
Ec32 ortholog descriptionArmadillo-like helical
Ec32 orthologEc-21_004090.1
Cds size1614
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7167.15343.1prot_E_fasciculatus_S2_contig7167.15343.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7167 1224..7817 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842379.2645915-CDS-E_fasciculatus_S2_contig7167:1223..14211696842379.2645915-CDS-E_fasciculatus_S2_contig7167:1223..1421Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7167 1224..1421 +
1696842379.277437-CDS-E_fasciculatus_S2_contig7167:1756..19171696842379.277437-CDS-E_fasciculatus_S2_contig7167:1756..1917Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7167 1757..1917 +
1696842379.2869484-CDS-E_fasciculatus_S2_contig7167:2674..27991696842379.2869484-CDS-E_fasciculatus_S2_contig7167:2674..2799Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7167 2675..2799 +
1696842379.296264-CDS-E_fasciculatus_S2_contig7167:3081..32391696842379.296264-CDS-E_fasciculatus_S2_contig7167:3081..3239Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7167 3082..3239 +
1696842379.3061743-CDS-E_fasciculatus_S2_contig7167:3717..38551696842379.3061743-CDS-E_fasciculatus_S2_contig7167:3717..3855Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7167 3718..3855 +
1696842379.3199327-CDS-E_fasciculatus_S2_contig7167:4528..46571696842379.3199327-CDS-E_fasciculatus_S2_contig7167:4528..4657Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7167 4529..4657 +
1696842379.3362374-CDS-E_fasciculatus_S2_contig7167:4951..50921696842379.3362374-CDS-E_fasciculatus_S2_contig7167:4951..5092Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7167 4952..5092 +
1696842379.3575928-CDS-E_fasciculatus_S2_contig7167:5716..58541696842379.3575928-CDS-E_fasciculatus_S2_contig7167:5716..5854Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7167 5717..5854 +
1696842379.3726196-CDS-E_fasciculatus_S2_contig7167:6398..65111696842379.3726196-CDS-E_fasciculatus_S2_contig7167:6398..6511Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7167 6399..6511 +
1696842379.389223-CDS-E_fasciculatus_S2_contig7167:6733..68701696842379.389223-CDS-E_fasciculatus_S2_contig7167:6733..6870Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7167 6734..6870 +
1696842379.4034553-CDS-E_fasciculatus_S2_contig7167:7641..78171696842379.4034553-CDS-E_fasciculatus_S2_contig7167:7641..7817Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7167 7642..7817 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7167.15343.1

>prot_E_fasciculatus_S2_contig7167.15343.1 ID=prot_E_fasciculatus_S2_contig7167.15343.1|Name=mRNA_E_fasciculatus_S2_contig7167.15343.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=538bp
MSASSAIRNESKASQGPAWGLQEQLSRLRKDGGSKNVAPTVQQDPSGRSK
IRVSVTGPALAHKIEQHFAGDKASNREILGFCAQEVDKALSVLVQRVKKK
VLVTIDKIDTQLLRLEGNMRQLCDEVEKKGNRMMREAKQTADSEREEKAI
LCQWLNGRVIFCSSSEPRLSSMDFTFARFALNMAMASSRTEPDVMLKAGA
PAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGGVPPLVLLCF
TSQSPAVLVQACISIAQLSRYAPNRAIIAAKGGIAAMVRLLEGFRREERV
TEQVIGQALTALVNVTYRSDANRGLVEECGATHPTITIMDALDNEVVLVQ
ACLALANMAYGNQFAALRLLEAGADKAACDLIRDSDKTRHSDVMKAAFIC
IANLANNPLNQAHVGAGDSVELALSVCKHCQSARVVRSAARALCSLTLKN
QANKTRCASLDAVSILLELAAAWGVAEDDGGSSKQTGTISSSRSAAAAAA
ATAEEEGAAAGQAASCVAILMQHPTNALAMKRGGGVRE
back to top

mRNA from alignment at E_fasciculatus_S2_contig7167:1224..7817+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7167.15343.1 ID=mRNA_E_fasciculatus_S2_contig7167.15343.1|Name=mRNA_E_fasciculatus_S2_contig7167.15343.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6594bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7167:1224..7817+ (Ectocarpus fasciculatus EfasUO2)
ATGAGCGCTTCGTCGGCAATCCGCAACGAAAGCAAGGCCTCCCAAGGCCC GGCATGGGGGCTTCAGGAGCAGTTAAGTCGCCTCCGCAAGGATGGCGGCA GCAAAAATGTTGCGCCAACGGTTCAGCAAGATCCATCAGGGAGGTCAAAG ATCCGAGTCTCCGTCACGGGTCCCGCGCTGGCGCATAAGATAGAGCAGGT ACTACTGTACACGTGTGTGAGATGCTACAATCACCGGTGGCATACGCAGA GCACTTTCTACTGCTATTTCCGTTTGACAGTCTCCGGTACACCGATCTTC TCCAACGGACGAGACCGTAGTATCTCGACACTCCTGGTACATGTTGATAA CAAGTGGCCTGATGCAGCAGCAACAGCAGTAATTACGGAGTGCAACGCGA ACCAAGGCTAAAGAGAGTCCATTGTATAGCACTGTGTAGTTTTGATTTTG TTTCGGGACCTTCAAGTCGTCTCCGTCACTTTTTCGTAACCACCGGTGTG GCGCCACCCCCGCCTGGTCCCACCCATCACCAGCATTTTGCAGGGGACAA GGCGAGCAACCGTGAGATTCTAGGGTTCTGCGCGCAAGAAGTGGACAAGG CCTTGAGCGTGCTTGTGCAGCGAGTGAAGAAGAAGGTGCTCGTCACTATA GACAAGATTGACACGCAGCTGCTCAGGCTCGAGGGCAACATGCGGTGGGT GTTAGTTTCTGGTTGTGGATGTACTGGGCGCACCTCTTATTCTCTGCGTG AGGTTCGCTCGCCTCGCTGGAGCTGCCTTCAGTCGAGGGCCCCTGTTTTC ATTTGCCCAACCCTGAGTTTAGTCAGGACTCTCCGCTGAGGTAGTGTTAC CCATACTTGGAAATCAACGGCATCACCCCCTTCCCATGGTTTTCGAGAGC ATTACTCTTGCACCTGACCAAAAATGTGTTCGCATTTTTCGCCATTTTTT CTTGAATGAAAAACCCGAGTCAACCTGAAACAGATGTACACAACGAATTC AGCACAGCAGTGATAAGAGAACAGAGACAACATATCCACGGGGAATCATC ACACACATCGGCACATGATGGTATTCCTCGAGCGCACCAGCGTACGATTT TATTGAGGGATCTTCCGCCTTCTACACCACCAGTGCATCACACCGTCCGC CAACGTGCACCTCCACACTATGGTCAAAACTCATCGTTTTGCAACGGCAA CGCACAACAAGCAAGGATGGTGCTGGTCATGGTCCGTTAGCTTGATTTTG ACCTCCAGCCGGTCGGGTTCCGTTTAGCCCGCACACTACACCTTCTTCCC ATCTGGCGAAAAAAATAGAGGCAATGTGGAGGCGACCCTTTGACAATTAG GATCGCCGGTGCTTGTCATTCTACTCTCGCGTTCCGCCTGCTGCCTCTTT AGCATTCATTACGAGACTTCTCATGTATGCTGCTCAAATTTCGCCCTGCA GACAACTCTGCGACGAGGTCGAAAAGAAGGGCAATCGCATGATGCGCGAA GCAAAGCAGACGGCGGACTCGGAGAGAGAAGAGAAGGCCATCCTGTGCCA GTGGCTGAACGGGCGAGTTATATTTTGTCCAGGCACATCAGCATAAAAGT ATGGCATGTGTAACGGTGGTACCGCGTTGACTCGGTTCGGTGATGAGAAG GTAGTGCGCACATGTGCCGAAGCCTGCTTTTTATGAATTACGCTGTGTTG TGCTCTTTCGTGCACCTTACTTCCCTGAAGTACATCCCACGCCCCCCCCC CCCCCACGTGTTCGCTTCTCCTGTGTGCTTTTATATCGCGTGTGGGAAAC AAAACGCGTGCGGTGTGTGAAATCGTGAAAATATTACCACCATTCAGGTT TCTGGTAGGTTCGTCCAGCGAGCCTCGGTTGTCGTCTATGGACTTTACGT TCGCGAGGTTCGCTCTAAACATGGCCATGGCCTCGAGCAGGACAGAGCCG GACGTGATGCTGAAGGCGGGAGCCCCGGCGTTTTTGGTGGGGATGCTGAC CAATCCGAACGAACTTGTGAGTTTTCATACTACATAATCGAACGCGTTCC CGGGGGCAATGGGCCACGGCCGTGCTACCAACAGCTAAACTCAAATTCAC AAACCACGCTCAAGTGTCCAGAGACGGAGAAGGCGGGGTACCTTCGTCTT CGTTTCGTACAGCTAGGAGTCGTTTCTTCCATGTGCAGCACCAAGAATGT CACCCTCTCTAAAGGTCGAGTGCGACCACGAGAAAACGTCGGCGGGGTGG TGGTTCTAGTTCTGTCGCTAATACCGCACGAGGAGCACCGTGAAACCCGC CAGAGCACGGCCACCACCGCCAATAACAACAAGATCAACAACACCAACAG CGCCAGCAATAGTAATAGCAACATCAACAGCAGCAACAACAGCAGCAGCA ACAGCAGCAGCATCGTCAAAGGTATCATGTCGTTGCAGACTCGAATCATC CTGTACCCCTTCTGCCCGTCGGAAACACGGAAACAAAACACAAGGTGACG GGACCGGCAGTCCTTGCCCTGTCACAGATGGCGCACCACGAGGCGTGCCA GCGCGCTCTGGGGCTGGCAGGGGGGGTACCCCCCTTGGTGCTCTTGTGCT TCACCAGCCAGTCGCCGGCGGTCCTCGTGCAGGTTAGTCGGGAATGACCG AGAGCCCCCTCCCCCTCCCCCTTGAAGTTTTCGGTTGACATGAAACTGCC CGTCTTTGTCGGTCGTGAGCAGGAGGCTTCGGGTGATTGTTCAATCGACT GTCTGGCTGGTTTCAGTCGGTGTCACTGAGTAAGTACGTTTTGATTCACG CGTGAAGGAGCGCTTCTGGAAGCCCGTTTCAGCGCACCTCTCGTGAACTC CACACGGACGGTGTTCGGAAAATTGTTCTCTCAACACAACACAGGAGTTA TACGTAACATTTACCTGTTGTTCAGGATACTTTGACGGGTTGGACAGAGT CTTCTTGGGGAGCTTCGTAGAAAAGTGGAAGCTCCGGCGGTTTCGAGGGC CGAATGTGCAGCGAGTTTTCCGGAGTTGCGACGTATACACACTACTACAG CAGTAGTTGTTGTGTACGACACAACACATGGCGCAGGGCTTTTGCGAGCC ACAAATGTTTCCCAGGTAGACGCAATCTACACGTTGCTTAGAGGATCAGA CTGCCGCGTGTGGGCTGGCATTAGTTCGCTGGTACCGTTGCCCACCCACC CGCTCAATACCCCCCCCCCCCCCTTCAGTTGTCGGTACAACACACGGCTC ACCCCACCACTCACCACGCCGTTGTTCCTCCTGGTTGCTCGCCTCGATTT GTCAGGCGTGCATTTCAATCGCTCAGTTGAGTCGATACGCGCCGAACAGA GCCATTATCGCGGCCAAGGGCGGCATCGCGGCCATGGTGCGCCTCCTCGA GGGATTCAGAAGAGAGGAGCGCGTCACTGAACAGGTTTGATCTGTGCCAT CGATAGTTGTGGTGTTGGTGTTGGTAGTTGTTGTTTTGATCGACGTTGTT TGTGCTGTTGTGGCGGTGTTGTTGTTGTTGGTTGTTGTTGTTGTTGTTGT TGTTGTTGTTGTTGTTGTTGATGATGATGATGATGATGATTGTATGCATG ATAAATAATTCTCCCAAACTTGAAAGACACTTGATCTTACGCCCAACCGA TCACGATCAAGAACCATCAACCACAGCAGTAGTACCAACCCACAGCATGC GACGTCCACAACACCACCAACTTTCCAGGTGATCGGACAAGCCCTTACCG CGCTCGTGAACGTGACCTACCGAAGCGACGCGAATCGAGGGCTGGTGGAA GAGTGCGGCGCAACTCACCCAACCATCACAATAATGGACGCCTTGGACAA CGAGGTGGTGCTGGTTCAGGTGAAGGGAAACCATGTAGTCCCATCCGCGG GCAAGTGGTGCGTGTGTGTGTGTGTGCGTGTTTATTTAAATAGCATCGTA CACGCAAACCGGCTGACCAATGAAAACACGTCAGTAACAGCGGAAAAGGA GCGAATTCCCCGGAACGAGGTTGAAGTTTAAAGAACGTGCGTCGCCGAGA AATCCAATAATACCACTCAAAGAACCCTTTGCAAGAGAGCCACGCCAACG GTGTGTGTACTGTGCAAGAGAGAGAGGGATGGACAAATCTGAACAGGGAG AGGAAGGAGGAGACTCGTGTGTCGCTTGCTCTCCATGGTACATTTTGTGC TACGTGTTGTGGAGTTCGTATGTTTAACATCAAAGAAGGGTAGCCGGTGT CATTGCTGTGGAATAGTAGACCCGTGATAAGACTCGTGTCTTTATTTTTC AGCCGTTGGGAAAAAATACCTCGGACGTTTTCCTTACGATACGTTCGTCC TTCCTTTTTCCTTCGCATCTCCCGCTCACCTTCGAATCGACAACCCATGC TACCGCTTTTGCCGCTGGAAATCTCCCCGTGTGGGGTATCCCACCGCCCA AACCGGCTCACCGTACCCGCTGCTCGGTCGGGGGGATGGATAGGCCTGCC TGGCCCTGGCCAATATGGCGTACGGTAACCAGTTTGCAGCGCTGCGTTTG TTGGAGGCGGGGGCGGACAAGGCAGCCTGCGACCTGATCAGGGACTCCGA CAAGACGAGACATAGCGACGTCATGAAGGCGGTGAGCTGCTGGGTACACA TCAGTGTCGCTGCTTGGTGGTGGGGGAATCGGCGTGGGGTGTCGGGCACC GTTTTTGGCGGCCATGGAGGCAGCGGCGATGGCTGTTCTTGTTGATCACC TCGGGTCTAACTGCTAGCCGGCGGTCATGGCAAAGGCATGAAGGCACACT ACACCTGAAGCGTTTACTACGGGAGAACAACACATGAAAATAAACCAGAA CCACGATCGATCGTACACTGAACTTGACGTTAACACGGCATTTTTTCGTC CATTTTACGGTATTAACACAGTTTTCGACGGTCTAGTCGAACCGTCTCAC GAGCTCTTCACGAAGAGCCAAAAAGTCAGTTTCTCACTACACCTCTTATA CTGCTGTGCGAATAGAGAGGGCAGGTCTTGCTATTCCTCCATCCGGATGA AGCGTGCGTGACCAACACTAGATTTCCAAGAGAGCAAACACTTTGGTACC GTATTTCGCCCCCCCGCCCCGCTCCCTTCCCTTCCTTATCCTTTTGTCTC ACTTCAACTCTTCTCTTGTATGTAGGCGTTCATCTGCATAGCCAACCTGG CCAACAACCCCCTCAACCAGGCCCATGTCGGCGCGGGGGACAGCGTGGAG CTCGCGCTGTCGGTGTGCAAGCACTGCCAGAGCGCCAGGTGAAAGTTATC ATCCTTACCGGAAAACCACAGCTATAGGACGTACGCAACTGGCGTACGTC GACCCGCTCCCCAGTTGCAGCCCTCAAGTTATCACTACAGATGATACATG GGTTGCACTTCGAAGGCAAGGCATATGTCGAAATTAGCTGTGTCCGAAAC ACGACGTCTCCGGTAGCCGTAAGTTTATACCCCGTCTCCTTCTTGTGTGC ACGATCCCAGGGTGGTGCGATCCGCCGCACGGGCCCTCTGTTCGCTGACG CTCAAGAACCAGGCCAACAAGACGCGGTGCGCGAGCTTGGACGCGGTGTC GATACTGCTCGAGCTCGCCGCGGCGTGGGGCGTCGCGGAAGACGACGGTG AGTGCCACCCCACCCAGATGACACGCAAAATTAGGTGACATCTTCTTTCC GGTGGCATCTTTCCGTTGCTCGTATCGTTTAGAGAGGATCACGCGCCTTT TTCGAGCAGCTGTGAAGCTTACGTATGATGTGTGTGGGTGTCTTTCGCAC CAAGTGTTTCTTGGGCACCAGCCTAAACCGTTAGGTATTTACTTTGACGC ACCAGCAGAGGAGAAGGCAACATCGGGACTCTTTGTGTTGCCCCACCTTC CCCCTTCGATGCCTGCCTTCAGTTCTGTGGTACGGAACAGTGCCAGCTCC GTGTATCAAACTCTGCTTGAAGCCCAGCAACGTGTTGACCAAGACTTGTA CCCTTCGACGTGGTAGGATTGTCCAGGCAAAAACATGTGGCTTCGAACTC TGGCCGGCTCGGCAACGGTATCTTCATGGCATACGAACGGAACCAAAAAA GATATGATGAACCGAGAGTACAGGTTTTCCATGGCTGCTTGGATGCATGT AGGTGGGCAGCAAAAACCCGGATCCCTTGTTGCCCCTGTAAACGACAGAG TGGGCTCCGATTCATGGGCTTGACGAGAAGGCGCGGCCACGAGAGCAAGC CATATGCACCACCCACAAAGAAATTCACCCACAGAGGCTACAAGAATAAC AAAGAGAAAATTACTCGTAAAATCCCCAGCACCCCCCTCCTCCCTGGGTT TCCATGGTGACGAAACAACGCCACATACCAAGGAGCGCACCCAATCGTCC GAACTCATTCGTTACCAGGAGGATCGAGCAAGCAGACAGGTACCATCTCA TCGTCCCGCTCGGCGGCGGCGGCGGCGGCGGCGACCGCTGAGGAGGAAGG GGCCGCGGCGGGGCAAGCAGCCAGCTGCGTGGCGATCCTGATGCAGCACC CGACCAACGCCCTCGCCATGAAGAGGGGAGGGGGGGTCAGGGAG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7167:1224..7817+

>mRNA_E_fasciculatus_S2_contig7167.15343.1 ID=mRNA_E_fasciculatus_S2_contig7167.15343.1|Name=mRNA_E_fasciculatus_S2_contig7167.15343.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1614bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7167:1224..7817+ (Ectocarpus fasciculatus EfasUO2)
ATGAGCGCTTCGTCGGCAATCCGCAACGAAAGCAAGGCCTCCCAAGGCCC
GGCATGGGGGCTTCAGGAGCAGTTAAGTCGCCTCCGCAAGGATGGCGGCA
GCAAAAATGTTGCGCCAACGGTTCAGCAAGATCCATCAGGGAGGTCAAAG
ATCCGAGTCTCCGTCACGGGTCCCGCGCTGGCGCATAAGATAGAGCAGCA
TTTTGCAGGGGACAAGGCGAGCAACCGTGAGATTCTAGGGTTCTGCGCGC
AAGAAGTGGACAAGGCCTTGAGCGTGCTTGTGCAGCGAGTGAAGAAGAAG
GTGCTCGTCACTATAGACAAGATTGACACGCAGCTGCTCAGGCTCGAGGG
CAACATGCGACAACTCTGCGACGAGGTCGAAAAGAAGGGCAATCGCATGA
TGCGCGAAGCAAAGCAGACGGCGGACTCGGAGAGAGAAGAGAAGGCCATC
CTGTGCCAGTGGCTGAACGGGCGAGTTATATTTTGTTCGTCCAGCGAGCC
TCGGTTGTCGTCTATGGACTTTACGTTCGCGAGGTTCGCTCTAAACATGG
CCATGGCCTCGAGCAGGACAGAGCCGGACGTGATGCTGAAGGCGGGAGCC
CCGGCGTTTTTGGTGGGGATGCTGACCAATCCGAACGAACTTGTGACGGG
ACCGGCAGTCCTTGCCCTGTCACAGATGGCGCACCACGAGGCGTGCCAGC
GCGCTCTGGGGCTGGCAGGGGGGGTACCCCCCTTGGTGCTCTTGTGCTTC
ACCAGCCAGTCGCCGGCGGTCCTCGTGCAGGCGTGCATTTCAATCGCTCA
GTTGAGTCGATACGCGCCGAACAGAGCCATTATCGCGGCCAAGGGCGGCA
TCGCGGCCATGGTGCGCCTCCTCGAGGGATTCAGAAGAGAGGAGCGCGTC
ACTGAACAGGTGATCGGACAAGCCCTTACCGCGCTCGTGAACGTGACCTA
CCGAAGCGACGCGAATCGAGGGCTGGTGGAAGAGTGCGGCGCAACTCACC
CAACCATCACAATAATGGACGCCTTGGACAACGAGGTGGTGCTGGTTCAG
GCCTGCCTGGCCCTGGCCAATATGGCGTACGGTAACCAGTTTGCAGCGCT
GCGTTTGTTGGAGGCGGGGGCGGACAAGGCAGCCTGCGACCTGATCAGGG
ACTCCGACAAGACGAGACATAGCGACGTCATGAAGGCGGCGTTCATCTGC
ATAGCCAACCTGGCCAACAACCCCCTCAACCAGGCCCATGTCGGCGCGGG
GGACAGCGTGGAGCTCGCGCTGTCGGTGTGCAAGCACTGCCAGAGCGCCA
GGGTGGTGCGATCCGCCGCACGGGCCCTCTGTTCGCTGACGCTCAAGAAC
CAGGCCAACAAGACGCGGTGCGCGAGCTTGGACGCGGTGTCGATACTGCT
CGAGCTCGCCGCGGCGTGGGGCGTCGCGGAAGACGACGGAGGATCGAGCA
AGCAGACAGGTACCATCTCATCGTCCCGCTCGGCGGCGGCGGCGGCGGCG
GCGACCGCTGAGGAGGAAGGGGCCGCGGCGGGGCAAGCAGCCAGCTGCGT
GGCGATCCTGATGCAGCACCCGACCAACGCCCTCGCCATGAAGAGGGGAG
GGGGGGTCAGGGAG
back to top