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Homology
BLAST of mRNA_E_fasciculatus_S2_contig7154.15332.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCX6_ECTSI) HSP 1 Score: 527 bits (1358), Expect = 7.220e-189 Identity = 269/275 (97.82%), Postives = 271/275 (98.55%), Query Frame = 1
Query: 1 QGAIGETKFIRTLRQIEYEAIQAPSAKAGATPLSDEELAEVVREFSAEGGEGGCNPNPGSRGENKVLYDDFVDMLVVASPRRRERGQRKARSPPKRRLSMSMVLPEGPVRRHRYQPPPTVHSYLNKMNAEEFDYHGDTNKQLARAMKAFSSSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSRNKDLLAAFFFPKEHGRVEYETLLEIITARDVRRAHAFRQQTVEEGADFDELFTGVDNTARKRDFGGTLNLFATAY 825
+GAIGETKFIRTLRQIEYEAIQAPSAKAGATPLSDEELAEVVREFSAEGG+GG NPNPGSR ENKVLYDDFVDMLVVASPRRRERGQRKARSPPKRRLSMSMVLPEGPVRRHRYQPPPTVHSYLNKMNAEEFDYHGDTNKQLARAMKAFSSSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSRNKDLLAAFFFPKEHGRVEYETLLEIITARDVRRA AFRQQT EEGADFDELFTGVDNTARKRDFGGTLNLFATAY
Sbjct: 2 KGAIGETKFIRTLRQIEYEAIQAPSAKAGATPLSDEELAEVVREFSAEGGDGGSNPNPGSRAENKVLYDDFVDMLVVASPRRRERGQRKARSPPKRRLSMSMVLPEGPVRRHRYQPPPTVHSYLNKMNAEEFDYHGDTNKQLARAMKAFSSSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSRNKDLLAAFFFPKEHGRVEYETLLEIITARDVRRARAFRQQTAEEGADFDELFTGVDNTARKRDFGGTLNLFATAY 276
BLAST of mRNA_E_fasciculatus_S2_contig7154.15332.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ4_9PHAE) HSP 1 Score: 388 bits (996), Expect = 6.630e-128 Identity = 262/566 (46.29%), Postives = 265/566 (46.82%), Query Frame = 1
Query: 1 QGAIGETKFIRTLRQIEYEAIQAPSAKAGATPLSDEELAEVVREFSAEGGEGGCNPNPGSRGENKVLYDDFVDMLVVASP---------------------------------------------RRRE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGQRKARSPPKRRLSMSMVLPEGPVRRHRYQPPPTVHSYLNKMNAE-------------------------------------------------------------------EFDYHGDTNKQLARAMKAFSSSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSRNKDLLAAFFFPKEHGRVEYETLLEIITARDVRRAHAFRQQTVEEGADFDELFTGVDNTARKRDFGGTL 804
+GAIGETKFIRTLRQIEYEAIQAPSAKAGATPLSDEELAEVVREFSAEGG+GG NPNPGSRGENKVLYDDFVDMLVVASP + RE RGQRKARSPPKRRLSMSMVLPEGPVRRHRYQPPPTVHSYLNKMNAE EFDYHGDTNKQLARAMKAFSSSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSRNKDLLAAFFFPKEHGRVEYETLLEIITARDVRRAHAFRQQT EEGADFDELFTGVDNTARKRDFGGTL
Sbjct: 94 KGAIGETKFIRTLRQIEYEAIQAPSAKAGATPLSDEELAEVVREFSAEGGDGGSNPNPGSRGENKVLYDDFVDMLVVASPSTAKLKDRGAKASMKVEDRILKVMYLHYEENPKASRLRSAFRRHDKEREGTVKQSQWVVVLRETKLSSVMTRQVAEAICLEHDTRADGTLDYAALCDDIFPGDFDHYSHQQHFVYKDQCLGSIVLDSAKDPDGEELQEDATKATSPNAQWASSASDXXXXXXXXXXERPECDDSLKGSGSSSGFSGSVASVPRSGSRGSVGSRDSVGGPSGDRRPGERCSTADAALGXXXXXXXXRGQRKARSPPKRRLSMSMVLPEGPVRRHRYQPPPTVHSYLNKMNAETXHRRRPKAIRRLFGCRTDPRFLCFVYKVVDRSFQGWGGATQETEXXXXXXXXXXXXRKESGDVRAREFDYHGDTNKQLARAMKAFSSSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSRNKDLLAAFFFPKEHGRVEYETLLEIITARDVRRAHAFRQQTAEEGADFDELFTGVDNTARKRDFGGTL 659
BLAST of mRNA_E_fasciculatus_S2_contig7154.15332.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGW2_HETAK) HSP 1 Score: 125 bits (315), Expect = 4.770e-32 Identity = 66/127 (51.97%), Postives = 86/127 (67.72%), Query Frame = 1
Query: 433 AMKAFSSSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSRNKDLLAAFFFPKEHGRVEYETLLEIITARDVRRAHAFRQQTVEEGADFDELFTGVDNTARKRDFGGTLNLF 813
AM AFSS+FAR R+K+LRKHF+AFD T ++ R F +++EVA+EFFIDFD R+K +L +FFP V+Y+ LL I RD RRA A R Q +E+ + LF D +R+RDFGGTLNLF
Sbjct: 55 AMCAFSSAFARMQRKKMLRKHFMAFDTRKTGKVGRKMFEHSIDEVAAEFFIDFDERDKGVLGDYFFPSHGSAVDYDQLLATICLRDFRRAQALRAQVLEDDDTREHLFIKND-LSRQRDFGGTLNLF 180
BLAST of mRNA_E_fasciculatus_S2_contig7154.15332.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTV8_9STRA) HSP 1 Score: 100 bits (249), Expect = 3.550e-20 Identity = 53/128 (41.41%), Postives = 85/128 (66.41%), Query Frame = 1
Query: 352 PTVHSYLNKMNAEEFDYHGDTNKQLARAMKAFSSSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSRNKDLLAAFFFPKEHGR-VEYETLLEIITARDVRRAHAFRQQTVEE 732
PT+ +YL ++N + GD +KQL RAM+AFS SFAR +R+KLLRK+ +++D+ NT R+ + F+ +V++ SE F++ D LA+FFFP+ ++YE LLE+I +RD+ +A R+ + E
Sbjct: 670 PTMRTYLKEVNEQLAACGGDESKQLERAMRAFSCSFARTHRKKLLRKNMISYDLGNTGRLDKVAFLRSVDKCVSEGFVELDVEQTQRLASFFFPQPTVNFLDYEVLLEVICSRDLGQAFEMREAALVE 797
BLAST of mRNA_E_fasciculatus_S2_contig7154.15332.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC17_AURAN) HSP 1 Score: 93.2 bits (230), Expect = 1.270e-17 Identity = 58/165 (35.15%), Postives = 91/165 (55.15%), Query Frame = 1
Query: 295 SMSMVLPE----GPVRRHRYQPP-------PTVHSYLNKMNAEEFDYHGDTNKQLARAMKAFSSSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSRNKDLLAAFFFPKEHGRVEYETLLEIITARDVRRAHAFRQQTVEEGADFDELF 756
++ M+LPE G V +Y+ PTV +YL+K+N D GD K+L ++AFSS+F R +R+K+LRKH +AFDV+NT R +FV +V + + + + D+R + LL FP R +TLL ++ +RDV+ Q +++ D LF
Sbjct: 1240 ALLMILPERGDIGAVDLDKYREHLTGGNKIPTVRNYLDKVNVTMRDCDGDVQKKLKNCLRAFSSAFGRNHRKKMLRKHLMAFDVSNTGTCHRDEFVGSVKRIIDDGYCELDTREQTLLFQHIFPHPWTRQPTDTLLTMLVSRDVKGVMRMHQAAMKQEEDPRFLF 1404
BLAST of mRNA_E_fasciculatus_S2_contig7154.15332.1 vs.
Match: Hypothetical (protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9B2_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 7.920e-6 Identity = 34/95 (35.79%), Postives = 52/95 (54.74%), Query Frame = 1
Query: 433 AMKAFSSSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSRNKDLLAAFFFPK-EHGRVEYETLLEIITARDVRRAHAFR 714
+M F+S FARA+R++ LRKH +A+DV+ T R+ R++ V VA E D + + + +FFFP E + + L RD+ A A R
Sbjct: 428 SMTVFASLFARADRKRFLRKHLMAYDVDRTGRMKRSELVSAAQHVADECDFDLNFATLEPMLSFFFPDTEAWELPLDDTLNAAFKRDMDAAAALR 522
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7154.15332.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 6
| Match Name | E-value | Identity | Description | |
| EF-hand | 7.220e-189 | 97.82 | domain-containing protein n=1 Tax=Ectocarpus silic... | [more] |
| EF-hand | 6.630e-128 | 46.29 | domain-containing protein n=1 Tax=Ectocarpus sp. C... | [more] |
| Hypothetical | 4.770e-32 | 51.97 | protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... | [more] |
| Hypothetical | 3.550e-20 | 41.41 | protein n=1 Tax=Florenciella parvula TaxID=236787 ... | [more] |
| Uncharacterized | 1.270e-17 | 35.15 | protein n=1 Tax=Aureococcus anophagefferens TaxID=... | [more] |
| Hypothetical | 7.920e-6 | 35.79 | protein n=2 Tax=Phaeomonas parva TaxID=124430 RepI... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 0 |
| Seed ortholog score | 95.1 |
| Seed ortholog evalue | 5.4e-17 |
| Seed eggNOG ortholog | 44056.XP_009038083.1 |
| Preferred name | USP39 |
| Model size | 828 |
| KEGG ko | ko:K12847 |
| KEGG Pathway | ko03040,map03040 |
| KEGG Module | M00354 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003824,GO:0004842,GO:0004843,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008380,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0010498,GO:0016043,GO:0016070,GO:0016071,GO:0016567,GO:0016579,GO:0016740,GO:0016787,GO:0019538,GO:0019783,GO:0019787,GO:0019941,GO:0022607,GO:0022613,GO:0022618,GO:0030163,GO:0031146,GO:0031974,GO:0031981,GO:0032446,GO:0034622,GO:0034641,GO:0036211,GO:0036459,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0051603,GO:0065003,GO:0070011,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0101005,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575 |
| Exons | 7 |
| EggNOG free text desc. | alpha-tubulin binding |
| EggNOG OGs | KOG0043@1,KOG0043@2759,KOG2026@1,KOG2026@2759 |
| Ec32 ortholog description | EF-hand domain pair |
| Ec32 ortholog | Ec-01_001430.1 |
| Cds size | 828 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03041 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842377.9140127-CDS-E_fasciculatus_S2_contig7154:1255..1279 | 1696842377.9140127-CDS-E_fasciculatus_S2_contig7154:1255..1279 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7154 1256..1279 - |
| 1696842377.9302144-CDS-E_fasciculatus_S2_contig7154:1762..1930 | 1696842377.9302144-CDS-E_fasciculatus_S2_contig7154:1762..1930 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7154 1763..1930 - |
| 1696842377.9442203-CDS-E_fasciculatus_S2_contig7154:2347..2419 | 1696842377.9442203-CDS-E_fasciculatus_S2_contig7154:2347..2419 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7154 2348..2419 - |
| 1696842377.956105-CDS-E_fasciculatus_S2_contig7154:2757..2931 | 1696842377.956105-CDS-E_fasciculatus_S2_contig7154:2757..2931 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7154 2758..2931 - |
| 1696842377.9666917-CDS-E_fasciculatus_S2_contig7154:3326..3474 | 1696842377.9666917-CDS-E_fasciculatus_S2_contig7154:3326..3474 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7154 3327..3474 - |
| 1696842377.9766374-CDS-E_fasciculatus_S2_contig7154:5529..5663 | 1696842377.9766374-CDS-E_fasciculatus_S2_contig7154:5529..5663 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7154 5530..5663 - |
| 1696842377.988479-CDS-E_fasciculatus_S2_contig7154:6185..6293 | 1696842377.988479-CDS-E_fasciculatus_S2_contig7154:6185..6293 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7154 6186..6293 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7154.15332.1 >prot_E_fasciculatus_S2_contig7154.15332.1 ID=prot_E_fasciculatus_S2_contig7154.15332.1|Name=mRNA_E_fasciculatus_S2_contig7154.15332.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=276bp
QGAIGETKFIRTLRQIEYEAIQAPSAKAGATPLSDEELAEVVREFSAEGG EGGCNPNPGSRGENKVLYDDFVDMLVVASPRRRERGQRKARSPPKRRLSM SMVLPEGPVRRHRYQPPPTVHSYLNKMNAEEFDYHGDTNKQLARAMKAFS SSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSR NKDLLAAFFFPKEHGRVEYETLLEIITARDVRRAHAFRQQTVEEGADFDE LFTGVDNTARKRDFGGTLNLFATAY* back to topmRNA from alignment at E_fasciculatus_S2_contig7154:1256..6293- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig7154.15332.1 ID=mRNA_E_fasciculatus_S2_contig7154.15332.1|Name=mRNA_E_fasciculatus_S2_contig7154.15332.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5038bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7154:1256..6293- (Ectocarpus fasciculatus EfasUO2) CAGGGCGCCATAGGCGAGACCAAGTTCATCCGCACCCTTCGGCAGATCGA
GTACGAGGCTATCCAAGCCCCCTCTGCCAAGGCCGGAGCCACTCCGCTGT
CCGATGAGGTCAAGCAATGTTCTCGTGTTTTCATGCCTACTAAATAGTTT
TTTTGTTGTGTTTTCTGTTTTGCTTGTTTCCCTTTTTCTTAGTTCCCGGT
ACAAGCACTTTTTGCAAAGCTCCAGGCCTAAACGAGATGGTTCAGACACG
AATGACATCGGTTGTCAACATCAACAACATCAACCAACATCAACAATATC
ACCATGCCCCTGGTGTCCTATCGACCTTGCTCCTAACGAACGTTGCTTGT
CGTCCGATAGAATTGCGCAGAGACGCCTAACGTTGAGCCCCTCAAAGCAC
ACATAAACCACCACATCAGAGTGGTCGTCCTCTTCTGAGACCAAATATTG
AAGTATCAGCAGGGCATTGGTGACGTTACCGATGAAGACGTCACCGCAAG
GAAAAGGTTGCTGCTCGAGGAAACCTCTCACGAAACAAAGGTTTGCGCAT
TTTTCCTCGCGCAAGACTGAACCCGGCCACCATCGCCCACGGCCTCTGTA
ATTTTCGATGTCGGACCCGATCGAGAGCAGGAGCTTGCCGAGGTCGTGCG
AGAGTTCAGCGCCGAGGGGGGAGAAGGCGGTTGCAACCCTAACCCTGGCT
CCCGTGGGGAGAACAAGGTCTTGTACGACGACTTTGTCGACATGCTGGTC
GTCGCCTCTCCCAGGTGGGCCATGCGATAAATGGCGCACCCCAAGCTAGT
AACTTCTTTAGCCTTCGACGGTAGATTTTACCCTACTGATGCAGTTATGT
CCGTTGGTAATTAATACGCGTACTTTGTTTTTCATCACGAACATTGTTCA
CTGCCAATTTAGTCGTAGAAGTGGTGCCAGATCTCTGTGTTACCTTCCTG
CAAAGACGGCCTCTCTCTGTGTTACCTTCCTCCTTCCTGTGTGACTGACC
TCGCTTGATACGTCAAACATATACCGAAAGGTGTACATAGACTGAATCCA
GAACAGATGGATCGAAAACACACAAACATCGTGAATCCCCCTCTCACGGG
GTCCCATATCAATGGAGCACACCCACTTGTGTCGCCACCAACAGTTTCTC
AGTGAAGCACCAGCACCAACGAAAAACTTCCTCACTCAGCGACCAAAATA
GATGGACCGAGAATCGACAATCAATTAAAAGTAGTTGAGCGATGCAACAA
GCTCCTATAGATACTTCTTATTGAAGAACGTAGGTTGCGCGTTTACGATG
ACGACTACTAGCAGAAGAACGCCGTCGTGCTTGCCGGTTGCTGCCGTCGA
CATTCTCGGCGATCCTTCATCGTGGGTCCCCCTTCTTGCAACTATTGTAG
CTGTGCTCTCTGTTTGCCGCATATTACGCCCGACGTGTCACGCCGGATGC
TGTCATGCCAAACTCTGACCAATCAGCACGGCGAAGCTGAAGGACCGCGG
GGCTAAGGCGTCCATGAAGGTTGAAGACCGCATCCTTAAGGTCATGTACC
TGCACTACGAGGAGAACCCTAAGGTGCGGAATTCGCGTGGTCTTCGTTGG
TAAGGTTACGTGCGTTGGTTCATCCCCTGCGTTTTGTTTTCTTCTCCATA
TTTTTCCTTGTCTTCGTCTTCTGTTGTTTTATTATCCTGCGTCTCCACTT
CTTTTCCTTACCGAGGCAAACCTCTACCAACAAACACCATCACCATGACA
ACCCACCACCGCAACGCCCTCGACAACACCACCACACTCCCGCGGCGGAA
CCCCCCCCACCACCCCCACAGGCGAGCCGCCTGCGATCAGCGTTCCGCCG
GCACGACAAGGAGCGAGAGGGCACCGTCAAGCAGAGCCAGTGGGTGGTCG
TGCTGCGGGAGACCAAGCTGAGCTCGGTCATGACGAGGCAGGTCGCCGAG
GCCATCTGCCTGGAGCACGACACGCGGGCGGACGGCACGCTGGACTACGC
CGCCCTGTGCGACGACATCTTCCCGGGGGACTTCGACCACTACGCCCACC
AGCAGCACTTCGTCTACAAGGTGAGCGGTGGGGGTCTCTCTGCTGTTGCT
TGCTGCTTGTGTTGCTGGCATCGTCGTGCTGCTGTTGTTGGTGTTCTTTT
CGCGTCGATCTCACACTCATTCATACGGCATAGGTTGTACACTCTGTTGC
TGCTGTTGCTGTAACAGCTATTGCTGCTGAGCCGTGTAGCTAGACCGTAC
ACAGAATTAATGCCTATGATCGGTTGTATTGCGTTGGTTTGGTGCCGAAA
AAGTTATGAAGTCGGCCAGAATACACAGGCCCTCAACCACTCTCCTTCCT
CGCCGCGCACATGCACCAACGCAAGCCCAAACTCACCCGCGAGGCGGTGA
CCCGCCTACGTCCGATCACCCCACCACGCCCCCCCCCCCCCCCCCTGCGA
ACCTAACCTTATACACTACACCACACACACGCCTCCTATCTCCCTCCAAC
AAACCTCGGGACAGGACCCCGCCAAAGACTCCGACGAAGAAGACCTCCAG
GAGGACGCCAACAACGCCAACAACTCGGACGCCCAGTGGGCAACCGCGTC
AGACAACAACAACGACGACGACGATGAGCGTCCCGAGTGCGACGACAGCC
TCAGGGGTAGCGGCGGCAGCAGCGGGTTCTCCGGCTCCGTGGCCTCCGTC
CCCCGATCGGGCTCCAGGGGCTCCATGGGATCCAGGGGCTCCGTGGGTGG
GCCGTCGGGGGACCGGCGGCCGGGGGAGCGGTGCTCCACGGCCGATGCCG
CCCTCGGCGGCGGCGGCAGGCGGCGGGAGCGGGGGCAGAGGAAGGCGCGG
TCCCCGCCCAAGCGCCGCCTGAGCATGAGCATGGTGCTGCCGGAAGGGCC
GGTGAGGAGGCACCGGTATCAGCCCCCGCCCACGGTGCACAGCTACCTCA
ACAAGATGAACGCGGAGGTGAGAGAGAGAGAAAGAGATAACGTGCGTGCG
CGTGTGCGTGCGTGTGGTTGTGATAACAAAAGGGGCGCGGAACGTTTTTC
ATAGTCCTTGGAGTTTTCTGTTGTATCTTGTGTATCCAACTATCCGCGGG
GAACCCTGTTCCGTAGCAAGTGGAGGGTACAAGGTGCTTTCTGTACTGGA
GGCGTACCTGTCGTCCAATGTTCTGAACAGACACACGTTTCGCTTTACGC
CTCAAAACGGGCCGAGTGCAAATACACGTTCTTGTCTGCCCGCCCGCCCC
TCCCCCTCCTCCTCCCAAAAAACATATCGATATGAGAAGACGACCATCTC
TCTCACTTTACCTCCGACACCCACCCGCCCCCACTAAATACATGAAAATA
ATGACTTCTCAGGAGTTCGACTACCACGGGGACACCAACAAGCAGCTGGC
ACGGGCCATGAAGGCGTTCAGCAGCAGCTTTGCGAGGGCCAACCGCCGCA
AGCTGCTGAGGAAGCACTTCTTGGCGTTCGATGTCAACAACACCCGGAGG
ATAAGCCGGGCGCAGTTCGTCGAGACAGTCAACGAGGTAGCATCATGCCG
TAGTTGCTGTTTGTCGTGGTTGTCGTCGTTGATGTCGAGATTGACGTAAT
TATTCAAACGCTTGGTTGGTCGTCGTTGTGGCTATTGTTGTCGCTACTGC
TGTCGGTGTCGTTGTCTTTGAAATGTGAATCGTTCACCTCTATTCAGCAT
CTCCTCTTTCGCACCAATCGAACCATAAAGAACAACGTATCCGCTGCCAC
AAAGGATACGACCACAAGTCGTATCAACCACTGCTAGAGACCTCCTATTT
CGATTCCCAACCGTCAACCACCCCACTCTCACCAGGCAGACTACACAACG
CCCCCCCCCTAAACTACGACGCAGGTCGCCTCTGAGTTTTTCATCGACTT
CGACAGCCGGAACAAAGATCTTCTCGCCGCTTTCTTCTTCCCCAAGGTAC
GTCAAGGAACCAATCAACCCTTTTTTAGTCGTGAAGAAACGCCTGGACGA
TCTTTTCGCTGGGACGGGGTCAAGCGTTGCCTGTACATAGTTTAAAGATA
GGCGAACACCTTCAATCTCGCTGAAGGGGAGATGCTTCCAGGGAATAACT
GGTATTGAGGACGTGAAGATGGACCCTCCTGAGGAACAGATCTTTCTAAA
ACCTCTAATTGTCGGAATTGAGACCGTTAGATATTATGGTCGGGCACCAA
GGTAGCCTTGATAGCCGGTCTAAGGTGTAGCGACGACCGGTGAAATTACA
GTCGACACCTCAACAGCGATGGAGGGTGCGAAAAAGGAGTGACAACCAAA
GTCGCGAGTCCTCCTGACGCTCCCTAACGGACCTCCCGCCCGCCGTGCGT
CTTGGTCTCCCAGGAGCACGGCAGGGTAGAGTACGAGACCCTCCTGGAGA
TCATCACAGCCAGGGACGTCCGCCGCGCGCACGCCTTCAGGCAGCAGACC
GTCGAGGAGGGCGCCGACTTCGACGAGCTCTTCACCGGCGTCGACAACAC
CGCCAGAAAGAGGGACTTCGGTGGCACGCTGGTGGGTAAAAGGCTTGCGT
GCGTAGCGTTGTGTATGTGTAGATAACTCTAAGGCTTGCGCAGGCCGACC
TAGCTATGTGGCGGGCGGGCCGGGCGGTGTGTAGCTAGGTAGCACAGGTT
TTTGTTAGGTGGGTTGGTGGTGGTGGTGGTGAGATAGTTCTGCCTGGTGC
ACGTCAGGGAGTAAACGGTATGGAGAGGATTTTCCGGAGAATGCTGACCA
AAGCACGCTTTCTGTTGTTTTAGGTGCCGTTGGAGTGAAAGGCGCATATA
CGCGAGGCACTGGAACGCGGCCAAAACTTCTCAGCAATCTGTCAATAACA
ACAGTAACATTGACATAGATATAGTTGCAGGTAGGCGGGACTGCTTGTGT
TTGTTCCTGATGCTGCCATAGACGTGCGTCACCGCCGTGCGCCAAACTCT
GAACGAGGCCACACCCCTCTCCCCACAAATGCCCGCCCCCTCCCATTTGC
CCCCGGTGAAACAGAACCTTTTCGCAACGGCCTACTGA back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig7154:1256..6293- >mRNA_E_fasciculatus_S2_contig7154.15332.1 ID=mRNA_E_fasciculatus_S2_contig7154.15332.1|Name=mRNA_E_fasciculatus_S2_contig7154.15332.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=828bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7154:1256..6293- (Ectocarpus fasciculatus EfasUO2) CAGGGCGCCATAGGCGAGACCAAGTTCATCCGCACCCTTCGGCAGATCGA GTACGAGGCTATCCAAGCCCCCTCTGCCAAGGCCGGAGCCACTCCGCTGT CCGATGAGGAGCTTGCCGAGGTCGTGCGAGAGTTCAGCGCCGAGGGGGGA GAAGGCGGTTGCAACCCTAACCCTGGCTCCCGTGGGGAGAACAAGGTCTT GTACGACGACTTTGTCGACATGCTGGTCGTCGCCTCTCCCAGGCGGCGGG AGCGGGGGCAGAGGAAGGCGCGGTCCCCGCCCAAGCGCCGCCTGAGCATG AGCATGGTGCTGCCGGAAGGGCCGGTGAGGAGGCACCGGTATCAGCCCCC GCCCACGGTGCACAGCTACCTCAACAAGATGAACGCGGAGGAGTTCGACT ACCACGGGGACACCAACAAGCAGCTGGCACGGGCCATGAAGGCGTTCAGC AGCAGCTTTGCGAGGGCCAACCGCCGCAAGCTGCTGAGGAAGCACTTCTT GGCGTTCGATGTCAACAACACCCGGAGGATAAGCCGGGCGCAGTTCGTCG AGACAGTCAACGAGGTCGCCTCTGAGTTTTTCATCGACTTCGACAGCCGG AACAAAGATCTTCTCGCCGCTTTCTTCTTCCCCAAGGAGCACGGCAGGGT AGAGTACGAGACCCTCCTGGAGATCATCACAGCCAGGGACGTCCGCCGCG CGCACGCCTTCAGGCAGCAGACCGTCGAGGAGGGCGCCGACTTCGACGAG CTCTTCACCGGCGTCGACAACACCGCCAGAAAGAGGGACTTCGGTGGCAC GCTGAACCTTTTCGCAACGGCCTACTGA back to top
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