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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 952 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 948 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842366.9742515-CDS-E_fasciculatus_S2_contig7069:2461..3332 | 1696842366.9742515-CDS-E_fasciculatus_S2_contig7069:2461..3332 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7069 2462..3332 + |
| 1696842366.9849634-CDS-E_fasciculatus_S2_contig7069:4245..4322 | 1696842366.9849634-CDS-E_fasciculatus_S2_contig7069:4245..4322 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7069 4246..4322 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7069.15233.1 >prot_E_fasciculatus_S2_contig7069.15233.1 ID=prot_E_fasciculatus_S2_contig7069.15233.1|Name=mRNA_E_fasciculatus_S2_contig7069.15233.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=316bp
GRDEFDPEGSRGVMSHLDGHLYHGTVKNVNWQEAGRAINDMNVAYKKQQR
RQGEDDVGIYTSSKSHGLSSESRVDADRLFARPGFKWLGGRLREQGWVLQ
SARVMPRRACGSFKWHLDTFSSEDQVRGVLTIHAGPGQLPAKLRFEVLKP
GYETQPERGERVIGPDGIRTREYEKTHGSLVLKDKVAAGAKSRCVHEVVA
AEGESGGPTVTIVFDARPGPQASTLEELHTGLLEGDAQTPAGGGGYADSL
VIPAADEVPRSTASRTATDDNNSIVTCPTTGRKRKKAAVKGNASWTGSSK
GLSEKETRAAVVRAEK back to topmRNA from alignment at E_fasciculatus_S2_contig7069:2462..4324+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig7069.15233.1 ID=mRNA_E_fasciculatus_S2_contig7069.15233.1|Name=mRNA_E_fasciculatus_S2_contig7069.15233.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1863bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7069:2462..4324+ (Ectocarpus fasciculatus EfasUO2)
GGTCGGGACGAGTTTGACCCCGAAGGCTCACGGGGCGTGATGTCTCACCT
TGACGGTCACCTCTACCACGGGACGGTGAAGAACGTCAATTGGCAGGAGG
CGGGGCGCGCCATCAATGACATGAACGTCGCCTACAAGAAGCAGCAAAGG
CGACAGGGCGAAGACGATGTGGGCATCTACACGTCTTCCAAAAGCCACGG
CCTCTCGTCGGAATCTCGCGTCGACGCTGACCGACTCTTCGCGCGCCCAG
GATTCAAATGGCTGGGGGGGCGCTTGAGAGAGCAGGGGTGGGTGCTCCAG
TCCGCCCGCGTCATGCCCCGCCGAGCCTGTGGCAGCTTCAAGTGGCACCT
GGACACGTTCTCGAGTGAAGACCAGGTACGTGGGGTGCTCACGATCCACG
CGGGCCCGGGGCAGCTGCCGGCGAAGCTTCGTTTCGAGGTCCTCAAGCCC
GGGTACGAGACTCAACCGGAACGCGGCGAGCGCGTGATCGGCCCGGATGG
AATCCGCACCAGGGAGTACGAGAAGACTCACGGCTCGCTCGTCTTGAAGG
ACAAGGTCGCTGCTGGAGCGAAGAGCCGGTGCGTACACGAGGTGGTGGCC
GCCGAGGGCGAGAGCGGGGGGCCCACGGTCACGATTGTCTTCGACGCGCG
CCCGGGGCCGCAGGCGTCGACACTGGAGGAGCTCCACACCGGTCTGCTCG
AAGGGGACGCGCAGACACCCGCCGGGGGGGGGGGGTACGCGGATAGTCTG
GTGATACCGGCAGCGGACGAGGTTCCCCGCTCCACCGCGTCGCGAACTGC
GACAGATGACAACAACTCGATTGTGACTTGCCCCACCACCGGCAGGAAGC
GCAAGAAGGCGGCCGTCAAGGGTGGGTGTTGTGAAGCTGTAGTTTAGTTT
CTGTTGTCATCGTTGTGTGACCTTCGTGTCTCCACGTTGTTGGCTGTCAT
TCTTTGTTGCTCGTAATGTTTTCAAGTAGATGCCGGTGTTGTACTTAATA
GACGATTTTCTCTTCACTAAGAACTTGGCTCTGATCTCACCCCCCCCCCA
TCCTTTCGATTGGCAGCGGTTTGTTCGAAATGTTGTCGTAGGTTGAAGCA
AGGACCAAGTCATGTAGACGAAAAATTGGACCTTCTCGCCCTCTCTCCCC
CCTTCCCCCACCAACAAACCTTCCATCACCGTGCTTGAATACACCCCATC
GAAAACAAGCGCGCCTGTCTGTGTGTATCCTCACGTACATGCTGCCGCGA
AGTTCGTCAAAGACCGCTCGACCGGTGGTGAGTTGCGGCTGTCGTCGCTT
GCTGCGGCCTCTGTTTTGCTTTCGTCTTGGTGACCTTGACATCATCGCCG
GCGAGCGGTCTCGCTTGGCCCCTCGGTGACGACCGTTTTTCTTGCACTTC
TTTTGCCATTCGTTTCGTGCCTTCGACCTTGCATGGCCACCGCGATAGCA
CTGCTTTGTGTTGGCGCCAACCTTTGCGAGATCGCCATCCGGCCCACCTG
CCCCTCCCCCCTCCGCCCCGAGGTTGAAAGATGGGCAGAGATCGCTCGCG
GGGGTTGTCAAGTAGGACCCAAGGCCTCATCGTTTCCCGTGTGCCGAGCC
GGGGCCTGTTTGCACCGACGGAAGCAAGGCGCCTCTGTCTGTCTCGTCTG
CATCCTCCGTCGTCTTGATGTCACGCACGTCGAATACGCCGCGCATTTGT
CTTTGTCCTCCTTTGCGCACTTTACTTGTGTGGGCAGCGGTGGCTGACGA
TCGCTCTCGTTTCTCCGTGCATCCAAACCCGCAGGCAACGCAAGCTGGAC
GGGTAGCTCGAAGGGGCTCAGCGAGAAGGAGACCAGAGCAGCCGTGGTGC
GGGCGGAGAAGGC back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig7069:2462..4324+ >mRNA_E_fasciculatus_S2_contig7069.15233.1 ID=mRNA_E_fasciculatus_S2_contig7069.15233.1|Name=mRNA_E_fasciculatus_S2_contig7069.15233.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=948bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7069:2462..4324+ (Ectocarpus fasciculatus EfasUO2)
GGTCGGGACGAGTTTGACCCCGAAGGCTCACGGGGCGTGATGTCTCACCT
TGACGGTCACCTCTACCACGGGACGGTGAAGAACGTCAATTGGCAGGAGG
CGGGGCGCGCCATCAATGACATGAACGTCGCCTACAAGAAGCAGCAAAGG
CGACAGGGCGAAGACGATGTGGGCATCTACACGTCTTCCAAAAGCCACGG
CCTCTCGTCGGAATCTCGCGTCGACGCTGACCGACTCTTCGCGCGCCCAG
GATTCAAATGGCTGGGGGGGCGCTTGAGAGAGCAGGGGTGGGTGCTCCAG
TCCGCCCGCGTCATGCCCCGCCGAGCCTGTGGCAGCTTCAAGTGGCACCT
GGACACGTTCTCGAGTGAAGACCAGGTACGTGGGGTGCTCACGATCCACG
CGGGCCCGGGGCAGCTGCCGGCGAAGCTTCGTTTCGAGGTCCTCAAGCCC
GGGTACGAGACTCAACCGGAACGCGGCGAGCGCGTGATCGGCCCGGATGG
AATCCGCACCAGGGAGTACGAGAAGACTCACGGCTCGCTCGTCTTGAAGG
ACAAGGTCGCTGCTGGAGCGAAGAGCCGGTGCGTACACGAGGTGGTGGCC
GCCGAGGGCGAGAGCGGGGGGCCCACGGTCACGATTGTCTTCGACGCGCG
CCCGGGGCCGCAGGCGTCGACACTGGAGGAGCTCCACACCGGTCTGCTCG
AAGGGGACGCGCAGACACCCGCCGGGGGGGGGGGGTACGCGGATAGTCTG
GTGATACCGGCAGCGGACGAGGTTCCCCGCTCCACCGCGTCGCGAACTGC
GACAGATGACAACAACTCGATTGTGACTTGCCCCACCACCGGCAGGAAGC
GCAAGAAGGCGGCCGTCAAGGGCAACGCAAGCTGGACGGGTAGCTCGAAG
GGGCTCAGCGAGAAGGAGACCAGAGCAGCCGTGGTGCGGGCGGAGAAG back to top
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