mRNA_E_fasciculatus_S2_contig706.15224.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig706.15224.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA3_ECTSI) HSP 1 Score: 469 bits (1206), Expect = 1.150e-162 Identity = 258/301 (85.71%), Postives = 263/301 (87.38%), Query Frame = 1
Query: 1 MCLWAAATRTQHQAAPRRANKNKPDAAAGVEEDDVEGFENELDAMAVEGDDDDAPPEERPS-PRRLSLLESNVNILEQDCKVAQLFVDAAMSRKDNLYLGLDISTQSTGYAVLRPSTATMPNLGDHCLSDDVSRPDSPEVLREMGEANLVEWGCISGNGSDGKKGDEIDVGIIVEQALVQVAARCDLSTGGKAPAVSGASSELEESGASSACAVKEDRKTGAGDAGDDLLPGADGKGRVWVVGVEDFMRRFLPGRSNAKSIFALAQLNGIIKYACHKHLGVKANSFHPSTPRSFYSLTKNK 900
MCLWAAAT QAAPRRA+K P AAAGVEEDDVE FENELDAM VEGD DDA PE RPS PRRLSLLESNVNILEQDCKVAQLFVDAA SRKDNLYLGLDISTQSTGYAVLRPSTATM NLG HCLSDDVS D P +LREMGEANLVEWGCISGNGSDGKKGDEIDVGIIVE+ LVQVA RC STGGKAPA S +SELEES S CAVK +KTG DAGDDL P AD KGRVWVVGVEDFMRRFLPGRSNAKSIFALAQLNGIIKYACHKHLGVKANSFHPSTPRSFYSLTKNK
Sbjct: 1 MCLWAAAT----QAAPRRADK--PAAAAGVEEDDVEVFENELDAMVVEGDGDDATPEGRPSSPRRLSLLESNVNILEQDCKVAQLFVDAAASRKDNLYLGLDISTQSTGYAVLRPSTATMSNLGGHCLSDDVSHADRPGLLREMGEANLVEWGCISGNGSDGKKGDEIDVGIIVEEVLVQVAERCVRSTGGKAPAASVTTSELEES-VGSGCAVKGYKKTG--DAGDDLQPEADDKGRVWVVGVEDFMRRFLPGRSNAKSIFALAQLNGIIKYACHKHLGVKANSFHPSTPRSFYSLTKNK 292
BLAST of mRNA_E_fasciculatus_S2_contig706.15224.1 vs.
Match: Uncharacterized (protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DU82_BRELC) HSP 1 Score: 72.8 bits (177), Expect = 5.240e-11 Identity = 34/60 (56.67%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 715 WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIIKYACHKHLGVKANSFHPSTPRSFYSLTK 894
W +G+E FMR FL GR N IF LAQLNGI+ YAC K GV HPS RSF+ L K
Sbjct: 101 WTIGIEAFMRMFLSGRFNNAGIFQLAQLNGIVSYACWKRFGVLPLHTHPSAARSFFGLRK 160
BLAST of mRNA_E_fasciculatus_S2_contig706.15224.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GN07_PHYRM) HSP 1 Score: 65.1 bits (157), Expect = 1.930e-8 Identity = 33/64 (51.56%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 703 KGRV-WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIIKYACHKHLGVKANSFHPSTPRSFYSLT 891
+GRV WVVG+E FMR F GR + IF LAQLNGI+ +AC K V HPS R F+ L+
Sbjct: 103 QGRVQWVVGIEAFMRMFRSGRFHNAGIFQLAQLNGIVSFACWKRFDVLPLHTHPSAARGFFGLS 166
BLAST of mRNA_E_fasciculatus_S2_contig706.15224.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YM71_PHYSP) HSP 1 Score: 65.1 bits (157), Expect = 2.410e-8 Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 715 WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIIKYACHKHLGVKANSFHPSTPRSFYSLT 891
WVVG+E FMR F GR + IF LAQLNGI+ YAC K V HPS R F+ L+
Sbjct: 106 WVVGIEAFMRMFRSGRFHNAGIFQLAQLNGIVSYACWKRFDVLPLHTHPSAARGFFGLS 164
BLAST of mRNA_E_fasciculatus_S2_contig706.15224.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PUX3_PHYPN) HSP 1 Score: 63.9 bits (154), Expect = 3.240e-8 Identity = 30/59 (50.85%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 715 WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIIKYACHKHLGVKANSFHPSTPRSFYSLT 891
WVVG+E FMR F GR + IF LAQLNGI+ +AC K V HPS R F+ L+
Sbjct: 107 WVVGIEAFMRMFRSGRFHNAGIFQLAQLNGIVSFACWKRFNVLPLHTHPSAARGFFGLS 165
BLAST of mRNA_E_fasciculatus_S2_contig706.15224.1 vs.
Match: Uncharacterized (protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWW1_PLAHL) HSP 1 Score: 64.3 bits (155), Expect = 4.020e-8 Identity = 30/58 (51.72%), Postives = 36/58 (62.07%), Query Frame = 1
Query: 715 WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIIKYACHKHLGVKANSFHPSTPRSFYSL 888
W+VG+E FMR F GR + IF LAQLNGI+ +AC K G HPS RSF+ L
Sbjct: 101 WIVGIEAFMRMFRSGRYHNAGIFQLAQLNGIVSFACWKRFGSLPLHTHPSAARSFHGL 158
BLAST of mRNA_E_fasciculatus_S2_contig706.15224.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X2I3_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 5.280e-8 Identity = 30/59 (50.85%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 715 WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIIKYACHKHLGVKANSFHPSTPRSFYSLT 891
WVVG+E FMR F GR + IF LAQLNGI+ +AC K V HPS R F+ L+
Sbjct: 104 WVVGIEAFMRMFRSGRFHNAGIFQLAQLNGIVSFACWKRFNVLPLHTHPSAARGFFGLS 162
BLAST of mRNA_E_fasciculatus_S2_contig706.15224.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CR17_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 5.800e-8 Identity = 30/59 (50.85%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 715 WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIIKYACHKHLGVKANSFHPSTPRSFYSLT 891
WVVG+E FMR F GR + IF LAQLNGI+ YAC + HPS RSF+ L+
Sbjct: 107 WVVGIEAFMRMFRSGRFHNAGIFQLAQLNGIVSYACWRRFDALPLHTHPSAARSFFGLS 165
BLAST of mRNA_E_fasciculatus_S2_contig706.15224.1 vs.
Match: Uncharacterized (protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CN40_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 5.800e-8 Identity = 30/59 (50.85%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 715 WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIIKYACHKHLGVKANSFHPSTPRSFYSLT 891
WVVG+E FMR F GR + IF LAQLNGI+ +AC K V HPS R F+ L+
Sbjct: 109 WVVGIEAFMRMFRSGRFHNAGIFQLAQLNGIVSFACWKRFNVLPLHTHPSAARGFFGLS 167
BLAST of mRNA_E_fasciculatus_S2_contig706.15224.1 vs.
Match: Uncharacterized (protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2KR43_PHYPR) HSP 1 Score: 63.9 bits (154), Expect = 5.970e-8 Identity = 30/59 (50.85%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 715 WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIIKYACHKHLGVKANSFHPSTPRSFYSLT 891
WVVG+E FMR F GR + IF LAQLNGI+ +AC K V HPS R F+ L+
Sbjct: 107 WVVGIEAFMRMFRSGRFHNAGIFQLAQLNGIVSFACWKRFNVLPLHTHPSAARGFFGLS 165 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig706.15224.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig706.15224.1 >prot_E_fasciculatus_S2_contig706.15224.1 ID=prot_E_fasciculatus_S2_contig706.15224.1|Name=mRNA_E_fasciculatus_S2_contig706.15224.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=304bp MCLWAAATRTQHQAAPRRANKNKPDAAAGVEEDDVEGFENELDAMAVEGDback to top mRNA from alignment at E_fasciculatus_S2_contig706:16864..21327+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig706.15224.1 ID=mRNA_E_fasciculatus_S2_contig706.15224.1|Name=mRNA_E_fasciculatus_S2_contig706.15224.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4464bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig706:16864..21327+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig706:16864..21327+ >mRNA_E_fasciculatus_S2_contig706.15224.1 ID=mRNA_E_fasciculatus_S2_contig706.15224.1|Name=mRNA_E_fasciculatus_S2_contig706.15224.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=912bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig706:16864..21327+ (Ectocarpus fasciculatus EfasUO2)back to top |