mRNA_E_fasciculatus_S2_contig706.15223.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig706.15223.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVA2_ECTSI) HSP 1 Score: 221 bits (562), Expect = 2.910e-67 Identity = 107/112 (95.54%), Postives = 110/112 (98.21%), Query Frame = 3
Query: 243 MAEFQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVTMTPGSTWTSQYVEVIGHLHEPDKLQEFKSTDFGDMFDLRKYNEAVTLMTGKFSYLFYNPQE 578
MAEFQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITV MT GSTWTSQYVEVIGHLHEPD+LQEFKSTDFGDMFDLRKY+EAV+LMTGKFSYLFYNPQE
Sbjct: 1 MAEFQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDMFDLRKYDEAVSLMTGKFSYLFYNPQE 112
BLAST of mRNA_E_fasciculatus_S2_contig706.15223.1 vs.
Match: Uncharacterized (protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UW39_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.620e-20 Identity = 50/101 (49.50%), Postives = 71/101 (70.30%), Query Frame = 3
Query: 261 PRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVTMTPGSTWTSQYVEVIGHLHEPDKLQEFKSTDFGDMFDLRKYNEAVTLMTGKFSYLF 563
PRVN A+L+QF+G+TV +VG + S+ S+A L+TSD +TV PG+ ++S+YVEVIG + L+EFK T FGD FDL+ Y++ V L+ GK+S LF
Sbjct: 8 PRVNKAILAQFVGHTVSLVGSIESWT--GSQAVLKTSDNGFVTVHPQPGADYSSKYVEVIGSVQPDGSLKEFKCTSFGDDFDLKNYDKLVQLIHGKYSTLF 106
BLAST of mRNA_E_fasciculatus_S2_contig706.15223.1 vs.
Match: Aste57867_12966 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWY3_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 8.090e-20 Identity = 49/101 (48.51%), Postives = 71/101 (70.30%), Query Frame = 3
Query: 261 PRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVTMTPGSTWTSQYVEVIGHLHEPDKLQEFKSTDFGDMFDLRKYNEAVTLMTGKFSYLF 563
PRVN AV++Q++G TV +VG + S+ S A ++TSDGA +TV PG+ +TS++VEVIG + LQE+K T FGD FDL+ Y++ V L+ GKF+ +F
Sbjct: 8 PRVNKAVMAQYIGRTVALVGSLESWT--GSMAVIKTSDGALVTVHPQPGADYTSKFVEVIGLVKPDGSLQEYKCTSFGDDFDLKNYDKLVHLIHGKFATMF 106
BLAST of mRNA_E_fasciculatus_S2_contig706.15223.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXL0_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 5.230e-19 Identity = 48/101 (47.52%), Postives = 70/101 (69.31%), Query Frame = 3
Query: 261 PRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVTMTPGSTWTSQYVEVIGHLHEPDKLQEFKSTDFGDMFDLRKYNEAVTLMTGKFSYLF 563
PRVN A+++QF+G TV +VG + S+ S A ++TSDG +TV PG+ ++S++VEVIG + L+E+K T FGD FDL+ Y++ V L+ GKFS LF
Sbjct: 8 PRVNKAIMAQFVGRTVALVGSLESWT--GSMAVVKTSDGGLVTVHPQPGADYSSKFVEVIGLVQPDGSLKEYKCTSFGDDFDLKNYDKLVHLIHGKFSSLF 106
BLAST of mRNA_E_fasciculatus_S2_contig706.15223.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3J4_PYTOL) HSP 1 Score: 86.3 bits (212), Expect = 8.950e-17 Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 3
Query: 261 PRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVTMTPGSTWTSQYVEVIGHLHEPDKLQEFKSTDFGDMFDLRKYNEAVTLMTGKFSYLF 563
PRVN + F+G TV +VG V S+ + L TSDG + V PGS ++S++VEVIG + + + LQEFK+T FGD FDL Y++ V + KF +LF
Sbjct: 12 PRVNKKTMGSFVGRTVAIVGAVESHMP--TAVVLRTSDGGMVNVNPMPGSDYSSKFVEVIGRVVDNNTLQEFKTTLFGDNFDLETYDQFVQVAQSKFRHLF 110
BLAST of mRNA_E_fasciculatus_S2_contig706.15223.1 vs.
Match: Uncharacterized (protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EA13_BRELC) HSP 1 Score: 84.3 bits (207), Expect = 4.170e-16 Identity = 46/102 (45.10%), Postives = 63/102 (61.76%), Query Frame = 3
Query: 258 TPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVTMTPGSTWTSQYVEVIGHLHEPDKLQEFKSTDFGDMFDLRKYNEAVTLMTGKFSYLF 563
+PRVN + ++G+TV VVG V + + L TSDG + VT PGS + S+ VEVIG + + + LQEFK+T FGD FDL Y++ V L K+ YLF
Sbjct: 10 SPRVNKTTMGGYVGHTVAVVGTVEKHSP--TAVVLRTSDGGIVNVTPQPGSDYGSKVVEVIGRVVDSETLQEFKTTLFGDNFDLDVYDQFVQLSHSKYKYLF 109
BLAST of mRNA_E_fasciculatus_S2_contig706.15223.1 vs.
Match: Replication (factor A protein 3 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YC96_9FUNG) HSP 1 Score: 83.2 bits (204), Expect = 8.790e-16 Identity = 43/102 (42.16%), Postives = 68/102 (66.67%), Query Frame = 3
Query: 258 TPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVTMTPGSTWTSQYVEVIGHLHEPDKLQEFKSTDFGDMFDLRKYNEAVTLMTGKFSYLF 563
TPR+N ++L Q TV +VGKV+ QEG A +E+SD +I+V++ PG+T+++ YVE+IG + + +QE S+ FG+ FDL YN V L + K++ +F
Sbjct: 5 TPRINSSMLGQHTNKTVRIVGKVMQLQEGS--ALIESSDHGQISVSLNPGTTFSTPYVEIIGIVQQDLSVQELTSSGFGENFDLDNYNSLVEL-SRKYTEIF 103
BLAST of mRNA_E_fasciculatus_S2_contig706.15223.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H303_PHYRM) HSP 1 Score: 82.8 bits (203), Expect = 1.580e-15 Identity = 43/102 (42.16%), Postives = 65/102 (63.73%), Query Frame = 3
Query: 258 TPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVTMTPGSTWTSQYVEVIGHLHEPDKLQEFKSTDFGDMFDLRKYNEAVTLMTGKFSYLF 563
+PRVN + ++G+TV +VG V S+ + +L TSDG + VT PG+ + S+ VEVIG + + + +QEFK+T FGD FDL Y++ V L K+ +LF
Sbjct: 13 SPRVNKKTMGAYVGHTVALVGAVESHTP--TAVKLRTSDGGIVNVTPQPGTDYGSKVVEVIGRVTDSESIQEFKTTLFGDNFDLDVYDQFVQLAQSKYKHLF 112
BLAST of mRNA_E_fasciculatus_S2_contig706.15223.1 vs.
Match: Uncharacterized (protein n=9 Tax=Peronosporaceae TaxID=4777 RepID=A0A225WD33_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 7.550e-15 Identity = 44/102 (43.14%), Postives = 63/102 (61.76%), Query Frame = 3
Query: 258 TPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVTMTPGSTWTSQYVEVIGHLHEPDKLQEFKSTDFGDMFDLRKYNEAVTLMTGKFSYLF 563
+PRVN + ++G+TV +VG V S+ + L TSDG + VT PGS + S+ VEVIG + + + +QEFK+T FGD FDL Y++ V L K+ LF
Sbjct: 13 SPRVNKKTMGAYVGHTVALVGAVESHSP--TAVVLRTSDGEIVNVTPQPGSDYGSKVVEVIGRVVDTETIQEFKTTLFGDNFDLDVYDQFVQLSQSKYKQLF 112
BLAST of mRNA_E_fasciculatus_S2_contig706.15223.1 vs.
Match: Metal-dependent (amidohydrolase 3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B2V0_PLAHL) HSP 1 Score: 87.8 bits (216), Expect = 1.180e-14 Identity = 46/102 (45.10%), Postives = 67/102 (65.69%), Query Frame = 3
Query: 258 TPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVTMTPGSTWTSQYVEVIGHLHEPDKLQEFKSTDFGDMFDLRKYNEAVTLMTGKFSYLF 563
+PRVN +S+++G TV +VG V S++ + L TSDG + VT PGS + S++VEVIG + + + +QEFK+T FGD FDL Y+ V L T K+ +LF
Sbjct: 548 SPRVNKKTMSEYIGTTVALVGAVESHRP--TAVVLRTSDGGIVNVTPQPGSDYGSRFVEVIGRVIDSETIQEFKTTLFGDNFDLDVYDNFVQLSTTKYKHLF 647 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig706.15223.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig706.15223.1 >prot_E_fasciculatus_S2_contig706.15223.1 ID=prot_E_fasciculatus_S2_contig706.15223.1|Name=mRNA_E_fasciculatus_S2_contig706.15223.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=113bp MAEFQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVback to top mRNA from alignment at E_fasciculatus_S2_contig706:11674..16519- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig706.15223.1 ID=mRNA_E_fasciculatus_S2_contig706.15223.1|Name=mRNA_E_fasciculatus_S2_contig706.15223.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4846bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig706:11674..16519- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig706:11674..16519- >mRNA_E_fasciculatus_S2_contig706.15223.1 ID=mRNA_E_fasciculatus_S2_contig706.15223.1|Name=mRNA_E_fasciculatus_S2_contig706.15223.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=339bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig706:11674..16519- (Ectocarpus fasciculatus EfasUO2)back to top |