mRNA_E_fasciculatus_S2_contig706.15222.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig706.15222.1 vs.
Match: PCI (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA1_ECTSI) HSP 1 Score: 701 bits (1809), Expect = 2.840e-246 Identity = 359/418 (85.89%), Postives = 382/418 (91.39%), Query Frame = 1
Query: 1 VGQDDVEAACSGSGRDSLPPVVVSLCREMLLYLQAVKNDDAKQAFKHYRGAFRVFVEDNSLLGFRGGQSGWLLPTLATMSRGVRLLANE-TDLDDENAQADVTGLLHTAFSACLRDRSTDPAESKKLMAMHMAVVLFKHCFKLNRLRMCQDLSKNVRGGTGDAESLAVRSDVVGFLFYEGLTSMHTAANDKHERAKAEATLTRALKLCHKEATGNRRRILVNLVSLRLRMGCLPERRLLEKYDLLIFDDFATAIRQGDLRRFSLLMKQHQRALIMSDLLPHLEGCRLMVYRQVLKQIGTALDINILPFRVIVLGLSLRGHEFDIDNDSFDPQQSAEDREIARWDELKIILAGLIMDGLISGVVRSRDAQLLLSKKTGFPKLPGRSKLGRRPQSRSQ----SRHLRATSTFNVLPVKID 1239
+ DDVEAACSG GRDSLPPV VSLCREMLLYLQAVKNDDAK+AFKHYRGAFRVFVEDNSLLGFRGGQSGWLLPTLATMSRGVRLLANE TDLDDE+AQADV GLLHTAFSACLRDRSTDP ESKKLMAMHMAVVLFKHCFKLNRLRMCQDLSKNVRGGTGDAESLAVR+DVV FL+YEG T MH AANDKHERAKAE TLTRALK CH ATGNRRRILVNLV LR+RMGCLPERRLLEKYDLLIFDDF+TAIRQG+L+RFSLLMKQH+RALI+SDLLPHLEGCRLM+YRQVLKQI TA D N+LPFRVIVLGL LRGHEFDIDNDSFDPQQSAE+RE+ARWDE+ ILAGLIMDGLISGVVRSRDAQLLLSKKTGFP LP ++ G RP+ R + SRHLR TSTFN+ P K++
Sbjct: 131 LSDDDVEAACSGGGRDSLPPVAVSLCREMLLYLQAVKNDDAKEAFKHYRGAFRVFVEDNSLLGFRGGQSGWLLPTLATMSRGVRLLANEKTDLDDEDAQADVVGLLHTAFSACLRDRSTDPVESKKLMAMHMAVVLFKHCFKLNRLRMCQDLSKNVRGGTGDAESLAVRADVVAFLYYEGKTFMHNAANDKHERAKAETTLTRALKECHVAATGNRRRILVNLVPLRMRMGCLPERRLLEKYDLLIFDDFSTAIRQGNLKRFSLLMKQHERALILSDLLPHLEGCRLMMYRQVLKQIATATDANVLPFRVIVLGLVLRGHEFDIDNDSFDPQQSAEERELARWDEVTFILAGLIMDGLISGVVRSRDAQLLLSKKTGFPDLPEVTETGLRPRLRPRPRPPSRHLRPTSTFNIFPAKVE 548
BLAST of mRNA_E_fasciculatus_S2_contig706.15222.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T3_9PHAE) HSP 1 Score: 345 bits (884), Expect = 2.140e-111 Identity = 193/292 (66.10%), Postives = 208/292 (71.23%), Query Frame = 1
Query: 379 MAMHMAVVLFKHCFKLNRLRMCQDLSKNVRGGTGDAESLAVRSDVVGFLFYEGLTSMHTAANDKHERAKAEATLTRALKLCHKEATGNRRRILVNLVSLRLRMGCLPERRLLEKYDLLIFDDFATAIRQGDLRRFSLLMKQHQRALIMSDLLPHLEGCRLMVYRQVLKQIGTALDINILPFRVIVLGLSLRGHEFDIDNDSFDPQQSAEDREIARWDELKIILAGLIMDGLISGVVRSRDAQLLLSKKTGFPKLPGRSKLGRRPQ------SRSQSRHLRATSTFNVLPVKI 1236
MAMHMAVVLFKHCFKLNRLRMCQDLSKNVRGGTG AESLA R+DVV FL+YEGLT MH AANDKHERA+AEATLTRALK CH ATGNRRRILVNLV LR+RMGCLP RRLLEKYDLLIFDDF++AI RVIVLGL LRGHEFDIDNDSFDPQQSAE+RE+ARWDE+ ILAGLIMDGLISGVVRSRDAQLLLSKKTGFP LP ++ G RP+ S HLR TSTF++LPVK+
Sbjct: 1 MAMHMAVVLFKHCFKLNRLRMCQDLSKNVRGGTGHAESLAARADVVAFLYYEGLTFMHNAANDKHERARAEATLTRALKECHVAATGNRRRILVNLVPLRMRMGCLPARRLLEKYDLLIFDDFSSAI------------------------------------------------------RVIVLGLVLRGHEFDIDNDSFDPQQSAEERELARWDEVTFILAGLIMDGLISGVVRSRDAQLLLSKKTGFPDLPEVTETGLRPRLXXXXXXXXPSGHLRPTSTFSILPVKV 238
BLAST of mRNA_E_fasciculatus_S2_contig706.15222.1 vs.
Match: PCI (domain-containing protein 2 homolog n=2 Tax=Ctenocephalides felis TaxID=7515 RepID=UPI000E6E1754) HSP 1 Score: 120 bits (301), Expect = 9.630e-26 Identity = 89/316 (28.16%), Postives = 161/316 (50.95%), Query Frame = 1
Query: 202 QSGWLLPTLATMSRGVRLLAN--ETDLDDENAQADVTGLLHTAFSACLRDRSTDPAESKKLMAMHMAVVLFKHCFKLNRLRMCQDLSKNVRGGT-GDAESLAVRSDVVGFLFYEGLTSMHTAANDKHERAKAEATLTRALKLCHKEATGNRRRILVNLVSLRLRMGCLPERRLLEKYDLLIFDDFATAIRQGDLRRFSLLMKQHQRALIMSDLLPHLEGCRLMVYRQVLKQIGTALDINILPFRVIVLGLSLRGHEFDIDNDSFDPQQSAEDREIARWDELKIILAGLIMDGLISGVVRSRDAQLLLSKKTGFPKL 1140
+ W+LP + T+ +RLLA E + GL+ F C D + ++K+L + + LFK F++N+L +C+ L + + + D LA + + + ++ G +M + + A+ L+ A + CH+EA N+R IL+ L +++ +G LP R++LEKYDLL F + ATA+R+GD+++ ++K H+R I S + + +++ YR + K++ L + +P + + L L G D+D DE + I+A LI +G I G + + +L++SK+ FP L
Sbjct: 98 EENWMLPMMYTICLDLRLLATRCEAGAPGPLLEKAAEGLMG-CFRVCAADNRSSDRDTKRLGMLLLVNQLFKVYFRINKLHLCKPLIRAIESSSFKDQFPLAQQ---ITYKYFVGRKAMFDS-----DYKMADEYLSYAFERCHREAKQNKRLILIYLAPVKMLLGLLPTRQVLEKYDLLPFWEVATAVREGDIKQLDKVIKDHERFFISSGVYLIVAKLKVIAYRNLFKKVYLILQTHQIPVQSLQDALHLVGQS-DVD-----------------VDETQCIVANLIHEGKIKGYISYQHQKLVVSKQNPFPLL 386
BLAST of mRNA_E_fasciculatus_S2_contig706.15222.1 vs.
Match: PCI (domain-containing protein 2 n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D091136) HSP 1 Score: 120 bits (300), Expect = 1.470e-25 Identity = 93/368 (25.27%), Postives = 178/368 (48.37%), Query Frame = 1
Query: 58 PVVVSLCREMLLYLQAVKNDDAKQAFKHYRGAFRVFVEDNSLLGFRGGQSGWLLPTLATMSRGVRLLANETDLDDENAQADVTGLLHTA-------FSACLRDRSTDPAESKKLMAMHMAVVLFKHCFKLNRLRMCQDLSKNVRGGTGDAESLAVRSDVVGFLFYEGLTSMHTAANDKHERAKAEATLTRALKLCHKEATGNRRRILVNLVSLRLRMGCLPERRLLEKYDLLIFDDFATAIRQGDLRRFSLLMKQHQRALIMSDLLPHLEGCRLMVYRQVLKQIGTALDINILPFRVIVLGLSLRGHEFDIDNDSFDPQQSAEDREIARWDELKIILAGLIMDGLISGVVRSRDAQLLLSKKTGFPKL 1140
P L L + A+ N D A++H V V +L + + W+LP + T+ +RLLA + + + ++ + +L A F C D + ++K+L + + LFK FK+N+L +C+ L + + +S A+ + + ++ G SM D + +A A+ LT A + CHK + N+R IL+ LV +++ +G +P + +LEKYD+L F + +++GDLR+ + ++H+ I + +E +++ YR + K++ L+ + +P + L G + D+D DE + I++ LI +G I G + + ++++SK+ FP L
Sbjct: 56 PPFDELVASHLKCIYALNNKDYLDAYQHQS---TVCVTLTKILQSQK-EENWMLPLMYTVCLDLRLLAEKAEKERQDRLSKPGEILEKAAECLMGCFRVCAADNRSSEEDTKRLGMLTIVNQLFKVYFKINKLHLCKPLIRAIDSSIFK-DSFAISQQIT-YRYFVGCKSMF----DSNYKA-ADEFLTYAFENCHKNSRKNKRLILIYLVPVKMLLGYMPSKSVLEKYDVLQFWELVEGVKRGDLRQLDQVQEKHESFFIKCGIYLIVEKLKIIAYRNLFKKVYQILNTHQIPVEALQCALEFVG-QTDVD-----------------LDETECIVSNLIFEGKIKGYISHQHRKVVVSKQNPFPPL 394
BLAST of mRNA_E_fasciculatus_S2_contig706.15222.1 vs.
Match: CSN12-like (protein n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8YTI1_THRPL) HSP 1 Score: 120 bits (300), Expect = 1.500e-25 Identity = 93/321 (28.97%), Postives = 158/321 (49.22%), Query Frame = 1
Query: 211 WLLPTLATMSRGVRLLANETDLDDEN--------AQADVTGLLHTAFSACLRDRSTDPAESKKLMAMHMAVVLFKHCFKLNRLRMCQDLSKNVRGGTGDAESLAVR---SDVVGFLFYEGLTSMHTAANDKHERAKAEATLTRALKLCHKEATGNRRRILVNLVSLRLRMGCLPERRLLEKYDLLIFDDFATAIRQGDLRRFSLLMKQHQRALIMSDLLPHLEGCRLMVYRQVLKQIGTALDINILPFRVIVLGLSLRGHEFDIDNDSFDPQQSAEDREIARWDELKIILAGLIMDGLISGVVRSRDAQLLLSKKTGFPKL 1140
WLL + T+ +RLLA + D + + A L F C D ++KK M + LFK F +N+L +C+ L + + D+ L R S V + +Y G +M D + ++ + LT A + CHK++ N+R IL+ LV +++ +G +P+R LLEKYDLL F D ++ GD+RR ++ M+ HQ+ + + LE +++ YR + K++ L + +P ++ L + DI ED ++A E + I+A LI +G I G + + +L++SK+ FP L
Sbjct: 103 WLLKAMFTVCLDLRLLAIQADKHNSSKGFGKSIEALEKAAECLMACFRVCAADNRASNEDTKKWGMMSLVNQLFKVYFGINKLNLCKPLIRAI-----DSSPLKDRFPVSQQVTYRYYVGRKAMF----DSNYKSAGDY-LTYAFERCHKQSKRNKRLILIYLVPIKMILGYMPQRNLLEKYDLLQFWDLVQGVQSGDVRRLNVAMQHHQKFFVQCGIYLLLEKLKVIAYRNLFKKVYLLLRTHQIPMDALLCALRM----MDI-----------EDIDLA---ETQCIVANLIYEGKIKGYISHQHQKLVVSKQNPFPPL 395
BLAST of mRNA_E_fasciculatus_S2_contig706.15222.1 vs.
Match: CSN12-like (protein n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653BGY9_CALMS) HSP 1 Score: 118 bits (296), Expect = 4.810e-25 Identity = 92/370 (24.86%), Postives = 176/370 (47.57%), Query Frame = 1
Query: 52 LPPVVVSLCREMLLYLQAVKNDDAKQAFKHYRGAFRVFVEDNSLLGFRGGQSGWLLPTLATMSRGVRLLANETDLDDENAQADVTGLLHTA-------FSACLRDRSTDPAESKKLMAMHMAVVLFKHCFKLNRLRMCQDLSKNVRGGTGDAESLAVRSDVVGFLFYEGLTSMHTAANDKHERAKAEATLTRALKLCHKEATGNRRRILVNLVSLRLRMGCLPERRLLEKYDLLIFDDFATAIRQGDLRRFSLLMKQHQRALIMSDLLPHLEGCRLMVYRQVLKQIGTALDINILPFRVIVLGLSLRGHEFDIDNDSFDPQQSAEDREIARWDELKIILAGLIMDGLISGVVRSRDAQLLLSKKTGFPKL 1140
L P + L L L + D +A++ +VF + + + W LP + T+ +RL+A + + + A +L A F C D + ++K+L + + LFK F++N+L +C+ L + + ES + V + ++ G SM+ D +A A+ LT A + CH+ + N+R IL+ LV +++ +G +P +++LEKYD+L F + A+ QGDL+ F LM++H+ I + ++ +++ YR + +++ L+ + +P ++ L G + D+D E + I+A LI +G I G + + ++++SK+ FP L
Sbjct: 54 LVPGIDELVTFHLKVLYYLGKGDYMEAYQQQSNMVQVFAK----IFQSQKEENWSLPIMYTVCTDLRLVAQKAEKERFRATEKPGEILEKAAECLMGCFRVCAADNRSGEEDTKRLGMLALVNQLFKVYFRINKLHLCKPLIRAIESSPFK-ESFPLGQQVT-YRYFVGRKSMY----DSDYKA-ADEYLTYAFENCHRASRKNKRLILIYLVPVKMLLGYIPSKKVLEKYDVLQFWELVQAVCQGDLKLFDQLMEKHESFFIKCGIYLIVDKLKIVAYRNLFRKVYLILNTHQIPVESLMNALQFLGQDVDLD-------------------ETQCIVANLIYEGKIKGYISHQHRKVVVSKQNPFPPL 393
BLAST of mRNA_E_fasciculatus_S2_contig706.15222.1 vs.
Match: CSN12-like (protein n=3 Tax=Photinus pyralis TaxID=7054 RepID=A0A5N4ASF5_PHOPY) HSP 1 Score: 118 bits (295), Expect = 5.480e-25 Identity = 85/322 (26.40%), Postives = 162/322 (50.31%), Query Frame = 1
Query: 202 QSGWLLPTLATMSRGVRLLANETDLDDENAQADVTGLLHTA-------FSACLRDRSTDPAESKKLMAMHMAVVLFKHCFKLNRLRMCQDLSKNVRGGTGDAESLAVRSDVVGFLFYEGLTSMHTAANDKHERAKAEATLTRALKLCHKEATGNRRRILVNLVSLRLRMGCLPERRLLEKYDLLIFDDFATAIRQGDLRRFSLLMKQHQRALIMSDLLPHLEGCRLMVYRQVLKQIGTALDINILPFRVIVLGLSLRGHEFDIDNDSFDPQQSAEDREIARWDELKIILAGLIMDGLISGVVRSRDAQLLLSKKTGFPKLPG 1146
+ W LP + T+ +RLLA + + + N +L A F C D + ++K++ + + LFK F++N+L +C+ L + + ES A+ S+ + + ++ G +M D +A A+ LT A + CH+ + N+R IL+ LV +++ +G +P +++LEKYD+ F + A+ QG+LR F +M +H+ I + +E +++ YR + +++ L+ + +P + L+L G + D+D DE + I+A LI +G I G + + ++++SK+ FP L G
Sbjct: 88 EENWALPIMYTVCLDLRLLAQKVEKERNNVNDKPGEILERAAESLLGCFRICAADNRSSEEDTKRIGMLTLVNQLFKVYFRINKLHLCKPLIRAIESSPFK-ESFAL-SEQITYRYFVGRKAMF----DSDYKA-ADDYLTYAFENCHRSSIKNKRLILIYLVPVKMLLGYIPSKQVLEKYDVTQFWELVQAVCQGNLRLFDDIMDKHETFFIKCGIYLIVEKLKIIAYRNLFRKVYLILNTHQIPVEALQSALALLGQD-DVD-----------------LDETECIVANLIFEGKIKGYISRQHRKVVVSKQNPFPSLIG 384
BLAST of mRNA_E_fasciculatus_S2_contig706.15222.1 vs.
Match: PCI (domain-containing protein 2 homolog n=1 Tax=Leptinotarsa decemlineata TaxID=7539 RepID=UPI000C2552CA) HSP 1 Score: 117 bits (294), Expect = 8.760e-25 Identity = 87/355 (24.51%), Postives = 174/355 (49.01%), Query Frame = 1
Query: 97 LQAVKNDDAKQAFKHYRGAFRVFVEDNSLLGFRGGQSGWLLPTLATMSRGVRLLANETDLDDENAQADVTGLLHTA-------FSACLRDRSTDPAESKKLMAMHMAVVLFKHCFKLNRLRMCQDLSKNVRGGTGDAESLAVRSDVVGFLFYEGLTSMHTAANDKHERAKAEATLTRALKLCHKEATGNRRRILVNLVSLRLRMGCLPERRLLEKYDLLIFDDFATAIRQGDLRRFSLLMKQHQRALIMSDLLPHLEGCRLMVYRQVLKQIGTALDINILPFRVIVLGLSLRGHEFDIDNDSFDPQQSAEDREIARWDELKIILAGLIMDGLISGVVRSRDAQLLLSKKTGFPKL 1140
L ++ + +A+K+ + F + +L + + W LP + T+ +RL+A + + A + +L A F C D + ++K++ + + LFK F++N+L +C+ L + + ES + V + ++ G +M+ D + +A A+ LT A + CHK + N+R IL+ LV +++ +G +P +++LEKYD++ F D A+ QG+L+ F LM++H+ I + ++ +++ YR + K++ L+ + +P + L G + D+D E + I+A LI +G I G + + ++++SK+ FP L
Sbjct: 69 LYSISKKNFLEAYKYQSALIQSFTK--TLQSQK--EENWCLPIMYTICSDLRLIAQQAEKQRLGATENPGEILEKAAECLMACFRVCAADNRSAEEDTKRIGMLALVNQLFKVYFRINKLHLCKPLIRAIESSPFK-ESFPLGQQVT-YRYFVGRKAMY----DSNYKA-ADEYLTYAFENCHKSSRKNKRLILIYLVPVKMLLGYIPSKKVLEKYDVIQFWDLVQAVCQGNLKLFDDLMEKHESFFIKCGIYLIVDKLKIIAYRNLFKKVYLILNTHQIPVEALQSALESLGQDVDLD-------------------ETQCIMANLIYEGKIKGYISHQHRKVVVSKQNPFPAL 393
BLAST of mRNA_E_fasciculatus_S2_contig706.15222.1 vs.
Match: CSN12-like (protein (Fragment) n=4 Tax=Microgastrinae TaxID=65207 RepID=A0A8J2HA33_COTCN) HSP 1 Score: 117 bits (292), Expect = 1.060e-24 Identity = 89/321 (27.73%), Postives = 162/321 (50.47%), Query Frame = 1
Query: 211 WLLPTLATMSRGVRLLANETDLDDENAQADVTG----------LLHTAFSACLRDRSTDPAESKKLMAMHMAVVLFKHCFKLNRLRMCQDLSKNVRGGT-GDAESLAVRSDVVGFLFYEGLTSMHTAANDKHERAKAEATLTRALKLCHKEATGNRRRILVNLVSLRLRMGCLPERRLLEKYDLLIFDDFATAIRQGDLRRFSLLMKQHQRALIMSDLLPHLEGCRLMVYRQVLKQIGTALDINILPFRVIVLGLSLRGHEFDIDNDSFDPQQSAEDREIARWDELKIILAGLIMDGLISGVVRSRDAQLLLSKKTGFPKL 1140
W+LP + + +RLLA + EN ++ T L F C D + ++K+ + + L K F++N+L +C+ L + + D LA R V + F+ G +M D + R+ A+ LT A + CHK++ N+R IL L+ +++ +G +P++ LLEKY+L+ F D A+++GDLR+ +M +H+ I + + +E +L+ YR + K++ AL+ + +P ++ L + G E D+D DE + ++A LI +G I G + + +L++SK+ FP+L
Sbjct: 77 WMLPVMNVVCLELRLLA----IQAENTKSKNTKPGEVLEKCAECLMGCFRVCAADNRSSEEDTKRWGMLALVNQLLKVYFRINKLHLCKPLIRAIDSSIYKDHFPLAQR---VTYKFFVGRNAMF----DSNYRS-ADEYLTFAFEHCHKQSAKNKRLILTYLIPVKMLLGFMPKKSLLEKYNLMEFWDLVEAVKKGDLRKLETVMTEHESFFIGAGIYLIVEKLKLLAYRNLFKKVWLALNTHQIPVSNLLTALEIYGVE-DVD-----------------MDETECLVANLIYEGKIKGYISHQHKKLVISKQNPFPRL 367
BLAST of mRNA_E_fasciculatus_S2_contig706.15222.1 vs.
Match: CSN12-like (protein n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1RS35_FRAOC) HSP 1 Score: 117 bits (293), Expect = 1.220e-24 Identity = 99/374 (26.47%), Postives = 174/374 (46.52%), Query Frame = 1
Query: 43 RDSLPPVVVSLCREMLLYLQAVKNDDAKQAFKHYRGAFRVFVEDNSLLGFRGGQSGWLLPTLATMSRGVRLLANETDLDDEN--------AQADVTGLLHTAFSACLRDRSTDPAESKKLMAMHMAVVLFKHCFKLNRLRMCQDLSKNVRGGTGDAESLAVRSDVVGFLFYEGLTSMHTAANDKHERAKAEATLTRALKLCHKEATGNRRRILVNLVSLRLRMGCLPERRLLEKYDLLIFDDFATAIRQGDLRRFSLLMKQHQRALIMSDLLPHLEGCRLMVYRQVLKQIGTALDINILPFRVIVLGLSLRGHEFDIDNDSFDPQQSAEDREIARWDELKIILAGLIMDGLISGVVRSRDAQLLLSKKTGFPKL 1140
++ L VVV+ R + A++ D +A++ + F LL R WLL + T+ +RLLA + D + + A + F C D ++KK M + LFK F++N+L +C+ L + + + + L S V + +Y G +M + + A LT A + CHK++ N+R IL+ LV +++ +G +P+R+LLEKYDLL F + ++ GD+RR + M+QHQ+ + + LE +++ YR + K++ + + ++ L + E DID E + I+A LI +G I G + + +L++SK+ FP L
Sbjct: 55 QNPLDEVVVAHLR----VIWALQTPDYAEAYRCQSLVVQAF--SRMLLACR--DDNWLLKAMFTVCLDLRLLAIQADKHNSDKGFGKSMEALEKAAECFMSCFRVCASDNRATNDDTKKWGMMSLVNQLFKVYFRVNKLHLCKPLIRAI--DSSPYKDLFPVSQQVTYRYYVGRKAMFDS-----DYKTAGEYLTYAFERCHKQSKRNKRLILIYLVPIKMILGYMPQRKLLEKYDLLQFWELVQGVQSGDVRRLNEAMRQHQKFFVQCGIYLLLEKLKVIAYRNLFKKVYLLQKTHQISMEALLCALKMMDIE-DID-----------------LSETQCIVANLIYEGKIKGYISHQHQKLVVSKQNPFPPL 395 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig706.15222.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig706.15222.1 >prot_E_fasciculatus_S2_contig706.15222.1 ID=prot_E_fasciculatus_S2_contig706.15222.1|Name=mRNA_E_fasciculatus_S2_contig706.15222.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=387bp MLLYLQAVKNDDAKQAFKHYRGAFRVFVEDNSLLGFRGGQSGWLLPTLATback to top mRNA from alignment at E_fasciculatus_S2_contig706:352..11059+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig706.15222.1 ID=mRNA_E_fasciculatus_S2_contig706.15222.1|Name=mRNA_E_fasciculatus_S2_contig706.15222.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=10708bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig706:352..11059+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig706:352..11059+ >mRNA_E_fasciculatus_S2_contig706.15222.1 ID=mRNA_E_fasciculatus_S2_contig706.15222.1|Name=mRNA_E_fasciculatus_S2_contig706.15222.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1161bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig706:352..11059+ (Ectocarpus fasciculatus EfasUO2)back to top |