mRNA_E_fasciculatus_S2_contig7056.15219.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7056.15219.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG5_ECTSI) HSP 1 Score: 261 bits (668), Expect = 1.250e-78 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1
Query: 1 SIVDVFLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHPPPPFEGHAFCFLPLPVNTLLPVHVNGFFELSSNRRDIWFGEDMQGEGKRRSEWNNLLLRDVIAPIYAALVARARD 366
SIVDVFLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHPPPPFEGHAFCFLPLPVNTLLPVHVNGFFELSSNRRDIWFGEDMQGEGKRRSEWNNLLLRDVIAPIYAALVARARD
Sbjct: 1441 SIVDVFLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHPPPPFEGHAFCFLPLPVNTLLPVHVNGFFELSSNRRDIWFGEDMQGEGKRRSEWNNLLLRDVIAPIYAALVARARD 1562
BLAST of mRNA_E_fasciculatus_S2_contig7056.15219.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K688_9PHAE) HSP 1 Score: 175 bits (444), Expect = 1.840e-48 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1
Query: 1 SIVDVFLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHPPPPFEGHAFCFLPLPVNTLLPVHVNGFFELSSN 240
SIVDVFLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHPPPPFEGHAFCFLPLPVNTLLPVHVNGFFELSSN
Sbjct: 788 SIVDVFLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHPPPPFEGHAFCFLPLPVNTLLPVHVNGFFELSSN 867
BLAST of mRNA_E_fasciculatus_S2_contig7056.15219.1 vs.
Match: RING-type (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL62_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.430e-46 Identity = 77/119 (64.71%), Postives = 90/119 (75.63%), Query Frame = 1
Query: 4 IVDVFLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHPPPPFEGHAFCFLPLPVNTLLPVHVNGFFELSSNRRDIWFGEDMQGEGKRRSEWNNLLLRDVIAPIYAALVARA 360
I DVF+VC +G G A+ AC P+ R +K +PWGGVAAH++RN P G AFCFLPLPV+ LPVHVNG+FELSSNRRDIWFGED+ GEG+RRSEWN LLL DVI P YA L+ A
Sbjct: 2096 IEDVFMVCVQLGAGRARAFACDPQQRDLKFLPWGGVAAHLTRNGKPIERTRGKAFCFLPLPVDAGLPVHVNGYFELSSNRRDIWFGEDLAGEGRRRSEWNRLLLEDVIVPAYALLLDAA 2214
BLAST of mRNA_E_fasciculatus_S2_contig7056.15219.1 vs.
Match: Hypothetical (protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QAL4_9STRA) HSP 1 Score: 160 bits (405), Expect = 3.330e-43 Identity = 68/119 (57.14%), Postives = 87/119 (73.11%), Query Frame = 1
Query: 10 DVFLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHPPPPFEGHAFCFLPLPVNTLLPVHVNGFFELSSNRRDIWFGEDMQGEGKRRSEWNNLLLRDVIAPIYAALVARARD 366
D +L+C+A+G G + MAC P+HR +K +PWG VA H++RN PP G+AFCFLPLP T VH+NG+FELS+NRRDIWFG DM G G+ R EWN LLLRDVI+P+Y ++ AR
Sbjct: 1830 DKYLICSALGSGQCRAMACNPKHRDLKFLPWGSVAVHLTRNEESPPNERGNAFCFLPLPSETGFAVHINGYFELSANRRDIWFGADMTGAGQVRYEWNRLLLRDVISPLYTQILLTARS 1948
BLAST of mRNA_E_fasciculatus_S2_contig7056.15219.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VVU2_9STRA) HSP 1 Score: 154 bits (388), Expect = 6.490e-41 Identity = 69/119 (57.98%), Postives = 89/119 (74.79%), Query Frame = 1
Query: 10 DVFLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHPPPPFEGHAFCFLPLPVNTLLPVHVNGFFELSSNRRDIWFGEDMQGEGKRRSEWNNLLLRDVIAPIYAALVARARD 366
D ++VC +GG K+ AC ++RHMK +PWGGVAA +S+ G+AFCFLPLPV T +PVHVNG+FELS+NRRDIW G DM GEG+ RSEWN LLL DVIAP+YA L++ +++
Sbjct: 1421 DKYIVCVGLGGRKCKEFACDEKYRHMKFLPWGGVAAKMSKT------LRGNAFCFLPLPVETGMPVHVNGYFELSANRRDIWMGSDMTGEGRVRSEWNELLLTDVIAPLYADLLSISQN 1533
BLAST of mRNA_E_fasciculatus_S2_contig7056.15219.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UD61_9STRA) HSP 1 Score: 150 bits (380), Expect = 7.750e-40 Identity = 65/122 (53.28%), Postives = 88/122 (72.13%), Query Frame = 1
Query: 1 SIVDVFLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHPPPPFEGHAFCFLPLPVNTLLPVHVNGFFELSSNRRDIWFGEDMQGEGKRRSEWNNLLLRDVIAPIYAALVARARD 366
+I D +L+C A+GGG+ + C +R +KL+PWGG AA + R+ P G+AFC LPLP T+LP+H+NG FELS+NRRDIW+G+DM G+G+ RS+WN LLL DVIAP+Y L+ AR
Sbjct: 619 TITDEYLICMALGGGSCRTFVCEENNRDLKLLPWGGCAALLRRDGSDAPLLNGNAFCGLPLPAQTMLPLHLNGMFELSANRRDIWYGDDMSGQGEIRSKWNRLLLSDVIAPLYMDLLLAARQ 740
BLAST of mRNA_E_fasciculatus_S2_contig7056.15219.1 vs.
Match: UBA (domain-containing protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NNW2_PHYPR) HSP 1 Score: 147 bits (371), Expect = 1.250e-38 Identity = 69/118 (58.47%), Postives = 82/118 (69.49%), Query Frame = 1
Query: 10 DVFLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHPPPPFEGHAFCFLPLPVNTLLPVHVNGFFELSSNRRDIWFGEDMQGEGKRRSEWNNLLLRDVIAPIYAALVARAR 363
+ +LVC IGGG A+ MAC E+ +KLIPW G+A+ I P EG AFCFLPLPV LPVHVNG+FELSSNRRDIW G+DM G+GK RSEWN LL D +AP Y A + A+
Sbjct: 1869 EKYLVCNQIGGGKARDMACAAENESLKLIPWVGIASRIDEE-----PMEGRAFCFLPLPVRVGLPVHVNGYFELSSNRRDIWTGDDMSGDGKLRSEWNANLLVDAVAPAYLAFLLEAK 1981
BLAST of mRNA_E_fasciculatus_S2_contig7056.15219.1 vs.
Match: Uncharacterized (protein n=38 Tax=Phytophthora TaxID=4783 RepID=W2RAY0_PHYPN) HSP 1 Score: 147 bits (371), Expect = 1.270e-38 Identity = 69/118 (58.47%), Postives = 82/118 (69.49%), Query Frame = 1
Query: 10 DVFLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHPPPPFEGHAFCFLPLPVNTLLPVHVNGFFELSSNRRDIWFGEDMQGEGKRRSEWNNLLLRDVIAPIYAALVARAR 363
+ +LVC IGGG A+ MAC E+ +KLIPW G+A+ I P EG AFCFLPLPV LPVHVNG+FELSSNRRDIW G+DM G+GK RSEWN LL D +AP Y A + A+
Sbjct: 1899 EKYLVCNQIGGGKARDMACAAENESLKLIPWVGIASRIDEE-----PMEGRAFCFLPLPVRVGLPVHVNGYFELSSNRRDIWTGDDMSGDGKLRSEWNANLLVDAVAPAYLAFLLEAK 2011
BLAST of mRNA_E_fasciculatus_S2_contig7056.15219.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XM38_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.730e-38 Identity = 66/119 (55.46%), Postives = 84/119 (70.59%), Query Frame = 1
Query: 7 VDVFLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHPPPPFEGHAFCFLPLPVNTLLPVHVNGFFELSSNRRDIWFGEDMQGEGKRRSEWNNLLLRDVIAPIYAALVARAR 363
++ +LVC +GGG A+++AC E+ +KLIPW G+A I P EG AFCFLPLPV LPVH+NG+FELSSNRRDIW G+DM G+GK RS+WN LLRD +AP Y + + AR
Sbjct: 1826 LEKYLVCNQLGGGRAREIACAAENESLKLIPWAGIAGRIGVA-----PAEGRAFCFLPLPVKVGLPVHINGYFELSSNRRDIWHGDDMTGDGKLRSDWNESLLRDAVAPAYLSFLLEAR 1939
BLAST of mRNA_E_fasciculatus_S2_contig7056.15219.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYE3_9STRA) HSP 1 Score: 145 bits (367), Expect = 4.380e-38 Identity = 68/116 (58.62%), Postives = 82/116 (70.69%), Query Frame = 1
Query: 16 FLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHP-PPPFEGHAFCFLPLPVNTLLPVHVNGFFELSSNRRDIWFGEDMQGEGKRRSEWNNLLLRDVIAPIYAALVARA 360
++V +GGG + MAC P+HRH+K IPW AA ++ N P G AFCFLPLPV T LPVHVNG+FELSSNRRDIW+GED+ GEG+RR+ WN LLR IAP YA L+ A
Sbjct: 2030 YIVSQLLGGGAVRDMACDPKHRHLKFIPWAATAARLAVNDAVVAEPITGRAFCFLPLPVVTNLPVHVNGYFELSSNRRDIWYGEDLAGEGRRRAIWNEALLRHAIAPCYAKLLVGA 2145 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7056.15219.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7056.15219.1 >prot_E_fasciculatus_S2_contig7056.15219.1 ID=prot_E_fasciculatus_S2_contig7056.15219.1|Name=mRNA_E_fasciculatus_S2_contig7056.15219.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=122bp SIVDVFLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHPPPPback to top mRNA from alignment at E_fasciculatus_S2_contig7056:3561..5214+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7056.15219.1 ID=mRNA_E_fasciculatus_S2_contig7056.15219.1|Name=mRNA_E_fasciculatus_S2_contig7056.15219.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1654bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7056:3561..5214+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7056:3561..5214+ >mRNA_E_fasciculatus_S2_contig7056.15219.1 ID=mRNA_E_fasciculatus_S2_contig7056.15219.1|Name=mRNA_E_fasciculatus_S2_contig7056.15219.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=366bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7056:3561..5214+ (Ectocarpus fasciculatus EfasUO2)back to top |