mRNA_E_fasciculatus_S2_contig705.15214.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig705.15214.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G777_ECTSI) HSP 1 Score: 325 bits (832), Expect = 1.290e-111 Identity = 155/158 (98.10%), Postives = 156/158 (98.73%), Query Frame = 1
Query: 166 MKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGKPIVGSEETVDFLMPGELSPEALRWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSDGPERASEFTAADASAFPFLQRVHGEFGFPSECHRLEAWYASASSRPGVRKTIKQDFWWWW 639
MKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGKPIVGSEETVDFLMPGELSPEALRWRSIVNDRLKSAGKRAVFSGGSETDR SLNAVLQDLEACLS+GPERASEFTAADASAFPFLQRVHGEFGFPSEC RLEAWYASASSRPGVRKTIKQDFWWWW
Sbjct: 1 MKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGKPIVGSEETVDFLMPGELSPEALRWRSIVNDRLKSAGKRAVFSGGSETDRNSLNAVLQDLEACLSNGPERASEFTAADASAFPFLQRVHGEFGFPSECKRLEAWYASASSRPGVRKTIKQDFWWWW 158
BLAST of mRNA_E_fasciculatus_S2_contig705.15214.1 vs.
Match: Thioredoxin-like (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAS3_9STRA) HSP 1 Score: 170 bits (431), Expect = 5.340e-50 Identity = 99/187 (52.94%), Postives = 116/187 (62.03%), Query Frame = 1
Query: 91 FVTNQKCPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVV-DGKPIVGSEETVDFLM---------PGELSPEALRWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSD-GPERASE-FTAADASAFPFLQRVHGEFGFPSECHRLEAWYASASSRPGVRKTI 615
F+TN+ CPYAQR WIALEES T YEM EVSLYG+GGKP+WF LNPKGEVPVLV DG I SE +D L P + A R++VN RLK AGKRAV S L A L++++A L+ GP + F AADASAFPFL RV EFGFP LEAW + +R GVR T+
Sbjct: 12 FITNKMCPYAQRVWIALEESGTPYEMAEVSLYGAGGKPAWFTALNPKGEVPVLVTADGAVIADSEAILDHLARPNSPLAPPPPCRAAHAAALRALVNARLKPAGKRAVLRP-SPAATAELMAALREIDAALATPGPYACGDAFCAADASAFPFLWRVRKEFGFPDGARALEAWADACEARAGVRATL 197
BLAST of mRNA_E_fasciculatus_S2_contig705.15214.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LE72_HETAK) HSP 1 Score: 164 bits (416), Expect = 4.460e-47 Identity = 83/189 (43.92%), Postives = 115/189 (60.85%), Query Frame = 1
Query: 85 VQFVTNQKCPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGKPIVGSEETVDF--------LMPGELSPEALRWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSDGPERASEFTAADASAFPFLQRVHGEFGFPSECHRLEAWYASASSRPGVRKTIKQDF 627
++FVTN+ CP+AQRTWIAL ++ +EM E++LYGSGGKP WF+ LNP+GEVPVL + G +VGSE T+D L P L E WR N++L GKRAV SGG R +L ++L++ +A ++ + T AD S FP +QRV EFGFP +L W+ S + P V +T + +
Sbjct: 69 IRFVTNKMCPFAQRTWIALLQAGMEFEMVEINLYGSGGKPGWFLRLNPRGEVPVLDLGGGAVVGSEATLDHVAAAAAPELRPPGLEQEIKEWRRRTNEQLLPIGKRAVQSGG----REALTSLLEEFDASVTGPFLTGEQVTVADISMFPMMQRVESEFGFPQGSEKLRTWFDSMMALPAVSETCQASW 253
BLAST of mRNA_E_fasciculatus_S2_contig705.15214.1 vs.
Match: Hypothetical (protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A063_NOCSC) HSP 1 Score: 151 bits (382), Expect = 1.310e-42 Identity = 78/191 (40.84%), Postives = 113/191 (59.16%), Query Frame = 1
Query: 85 VQFVTNQKCPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGKPIVGSEETVDFLMPGE---LSPEA---LRWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSDGP---ERASEFTAADASAFPFLQRVHGEFGFPSE-CHRLEAWYASASSRPGVRKTIKQDF 627
++ VTN CP+AQ+ W+ALEES Y +E+SLYG GKP WF+ LNP+G+VPVLVVDG ++ SE +D++ P+A +WR + R+ GK V GGS+ ++ L+A L++LE L +G F+ ADA+A PF+QR+ EF P + L AW+ R GV KT++Q +
Sbjct: 12 LELVTNAMCPFAQKAWVALEESKLPYTSREISLYGPNGKPPWFLRLNPRGQVPVLVVDGNAVIDSESILDWIATEAQHMAPPDAHLGAQWRRCIGQRVAPGGKALVLGGGSQ-EKAILHAALRELEEILQEGRGAYAAGGSFSVADAAAVPFMQRLCEEFDLPGDDTPLLRAWWERVKRRDGVAKTLQQSW 201
BLAST of mRNA_E_fasciculatus_S2_contig705.15214.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R7Y9_ALECA) HSP 1 Score: 143 bits (360), Expect = 7.080e-39 Identity = 78/190 (41.05%), Postives = 112/190 (58.95%), Query Frame = 1
Query: 88 QFVTNQKCPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGK-PIVGSEETVDFLMPG--ELSPE----ALRWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACL--SDGPERASE-FTAADASAFPFLQRVHGEFGFPSECHRLEAWYASASSRPGVRKTIKQDF 627
+ VTN+ CP+AQ+ W+ALEES + + E+SLYG+GGKP WFM LNPKGE+PVL+ G +V SE+ +D++ E+SPE +R ++ R+ AGK V GG L+ L DL L S G A + F+ ADA+A PF+QR+ +G P E L W+ +RPGV T+++ +
Sbjct: 48 ELVTNRMCPFAQKAWVALEESGVPFSLTEISLYGAGGKPEWFMKLNPKGEIPVLIKSGGGAVVDSEKILDWVAKEVPEMSPEDAAAGTAFRRCISGRVAPAGKSRVIRGGGGAG-DDLDKALGDLNDLLEASPGSYAAGDCFSVADAAAVPFVQRLDERYGLPEEAAALRRWWELVRARPGVAATLQRSW 236
BLAST of mRNA_E_fasciculatus_S2_contig705.15214.1 vs.
Match: Uncharacterized (protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FU02_VITBC) HSP 1 Score: 134 bits (336), Expect = 7.060e-36 Identity = 76/183 (41.53%), Postives = 104/183 (56.83%), Query Frame = 1
Query: 109 CPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGKPIVGSEETVDFLMPGELSPEAL--------RWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSDGPERA-----SEFTAADASAFPFLQRVHGEFGF--PSECHRLEAWYASASSRPGVRKT 612
CP+AQRTWIALEE+ Y++ EVSLYG+GGKP WF+DLNPKG VPVLV+DG+P+ SE T+D + EL+P +WR ++ RL GK AV + S+ + +L V+ + EA L + P + + AD SA PF R+ E E W A+ +R VR+T
Sbjct: 2 CPFAQRTWIALEEAGLPYKLTEVSLYGAGGKPKWFLDLNPKGLVPVLVIDGQPVAESEATLDAI--AELAPSLATPTPSKRQQWRDMLEQRLIPVGKAAVLNPSSK-NMAALRVVIAEWEAKLRERPGKGHFLCGEALSIADVSAVPFWSRLQEEMDCVGAEEFPLTHEWLAACRAREAVRRT 181
BLAST of mRNA_E_fasciculatus_S2_contig705.15214.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WB00_9STRA) HSP 1 Score: 129 bits (323), Expect = 2.110e-33 Identity = 77/196 (39.29%), Postives = 107/196 (54.59%), Query Frame = 1
Query: 88 QFVTNQKCPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDG--KPIVGSEETVDFLMPG------ELSPEA-------LRWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSDGPERASE-FTAADASAFPFLQRVHGEFGFPSE---CHRLEAWYASASSRPGVRKTIK 618
QF TN+ CPYAQ+ WIALE YEM EVSLYG+GGKP WF+DLNP G+VPVL G K + SE + + G +LS ++ WR + +R+ GK AV GG L ++L++L+ + GP E T AD +AFPFL R++ EFG ++ C + W + + P KT++
Sbjct: 42 QFYTNKMCPYAQKVWIALEVGGCPYEMTEVSLYGAGGKPDWFLDLNPDGQVPVLTCFGGAKIFIDSEYILSRIADGVVEGGSKLSMDSDDDREKMEEWRHAIANRVNPIGKAAVQRGGKNVKE--LMSLLKELDGKVK-GPYLCGETVTVADCAAFPFLWRINDEFGPLTDEEGCGNIRKWLDTCAENPSFSKTVQ 234
BLAST of mRNA_E_fasciculatus_S2_contig705.15214.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K6F8_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.970e-32 Identity = 77/197 (39.09%), Postives = 109/197 (55.33%), Query Frame = 1
Query: 82 NVQFVTNQKCPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDG--KPIVGSE-----------ETVDFLMP-GELSPEALR-WRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSDGPERASE-FTAADASAFPFLQRVHGEFGFPSE--CHRLEAWYASASSRPGVRKTIK 618
+ QF TN+ CP+AQ+ WIALE +EM EVSLYG+GGKP WFMDLNP+G+VPVL G K + SE E LMP +++ E + WR +++R+ GK AV GG D L +L++++ + GP + T AD +AFPFL R++ E+ E C + W ++ P KTI+
Sbjct: 70 STQFYTNKMCPFAQKVWIALEVGGCPHEMIEVSLYGAGGKPDWFMDLNPEGQVPVLTCFGGAKIFIDSEYILTRIADGVVEGGSKLMPDSDVNKEKMEEWRHDISNRVIPIGKLAVQKGGKNVDE--LMELLKEMDVKIK-GPYLCGDAVTVADCAAFPFLWRINDEWPLTEENGCENIRKWLDKCTANPAFAKTIQ 263
BLAST of mRNA_E_fasciculatus_S2_contig705.15214.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G9J8_9STRA) HSP 1 Score: 125 bits (314), Expect = 7.600e-32 Identity = 73/205 (35.61%), Postives = 105/205 (51.22%), Query Frame = 1
Query: 88 QFVTNQKCPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVV---DGKP---IVGSEETVDFLMPGE-----------------LSPEALRWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSDGPERASEFTAADASAFPFLQRVHGEFGFP--SECHRLEAWYASASSRPGVRKTIKQDF 627
+FVTN+ CP+AQ+ WIALE S T ++M+E+SLYG+ GKP WF LNP G VPVLV G+P I SE+ ++ + G+ L + WR + R+ GK AV G +T L +L DL + + T AD +AFPFL R+H EFG ++ L +W + P +KT++ +
Sbjct: 51 RFVTNKMCPFAQKAWIALECSETPFKMEEISLYGANGKPDWFWKLNPDGTVPVLVAATAKGRPDAIIADSEDILNSFVAGDVIGGNGVLTCDENQEQSLFQKQQWWRDTIQRRVNPIGKSAVLGAG----KTKLYDLLHDLNSEVVGPYLCGDRVTVADCAAFPFLWRIHNEFGLDEVNKNSNLLSWLRTCEGNPAFQKTVQNSW 251
BLAST of mRNA_E_fasciculatus_S2_contig705.15214.1 vs.
Match: Uncharacterized (protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JRP8_GUITC) HSP 1 Score: 123 bits (309), Expect = 3.560e-30 Identity = 73/212 (34.43%), Postives = 115/212 (54.25%), Query Frame = 1
Query: 31 LICRSSLAWQSTLRMAANVQFVTNQKCPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGKPIVGSEETVDFL-----MPGELSP----EALRWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSDGPERASEFTAADASAFPFLQRVHGE---FGFP-SECHRLEAWYASASSRPGVRKTIKQDF 627
L+ R A Q+T+ ++V TN+ CP+AQ+ WIALEE Y++ E+SLYGSGGKP WF+D+NPKG+VPVL K +V S+E + ++ G+L+ + W + + +GK + GS +TSLN L+ +E + +FT AD ++ PF QR+ E G E ++ AWY + ++P T+ + +
Sbjct: 52 LVLRVRGASQATM---SDVTLYTNKMCPFAQKAWIALEEKKVKYDLVEISLYGSGGKPRWFLDMNPKGQVPVLKHGDKVVVESDEILKYIDQHMGSTGDLTKGHESDVAAWMKFLGSEVLPSGKALINGYGS---KTSLNEALRRMEERIQGPFIFGGDFTLADIASAPFFQRMMTEQARLGLNRQEYPKIFAWYEAIKAKPSFSNTVVKSW 257 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig705.15214.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig705.15214.1 >prot_E_fasciculatus_S2_contig705.15214.1 ID=prot_E_fasciculatus_S2_contig705.15214.1|Name=mRNA_E_fasciculatus_S2_contig705.15214.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=214bp MKASTSLAAALICRSSLAWQSTLRMAANVQFVTNQKCPYAQRTWIALEESback to top mRNA from alignment at E_fasciculatus_S2_contig705:22100..23151+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig705.15214.1 ID=mRNA_E_fasciculatus_S2_contig705.15214.1|Name=mRNA_E_fasciculatus_S2_contig705.15214.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1052bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig705:22100..23151+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig705:22100..23151+ >mRNA_E_fasciculatus_S2_contig705.15214.1 ID=mRNA_E_fasciculatus_S2_contig705.15214.1|Name=mRNA_E_fasciculatus_S2_contig705.15214.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=642bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig705:22100..23151+ (Ectocarpus fasciculatus EfasUO2)back to top |