mRNA_E_fasciculatus_S2_contig702.15180.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig702.15180.1 vs.
Match: VOC (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G620_ECTSI) HSP 1 Score: 733 bits (1891), Expect = 1.150e-260 Identity = 387/436 (88.76%), Postives = 403/436 (92.43%), Query Frame = 1
Query: 1 MSRRLALVSVFLAPYAAGAVDAAGAAVATSTGPAATYETLFKSPWNEDSNKHGLQHLEHVNGRRMPLHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGTTQIHLPEGEPQVVPGTIGLVYGGSDLAEVIARLTENAVSNGNENNGKNALEGTKFAWREEKEEGGDQTGHVDVTCPYGNVYRLHKRKPSSSTISPEATQAAITSDRGDGAGALDPRGGRLPNVSAGGNASSSLGLGISYVSFRVRLGSAAGIARFYREVFGAEAEEMGGGXXXXXXXXXXXSSGEDVCSATQEGDSGKGSRCSTATEAERTDGATAVVRVGPVQHLVFVEEEDEALLPQEYDGHHICVYLPEEGFRRSYEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSYPVGRDLSAHTPM 1308
MSRRLALVSVFLAPYAAGA DAAGA+ ATSTGPAA YETLFKSPWNED+NKHGLQHLEHVN +P HDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIG+TQIHLPEGEPQVVPGTIGLVYG SDLAEVIARLTENA++NGNENN KNALEGTKFAWREEKEEGG++TG+VDVTCPYGNVYRLHKRKPSSSTI+PEATQAA ALDPRGGRLPNV AGG SSSLGLGISYVSFRVR G+AAGIARFYRE+FGAEA+EMGG XXXXXXXXXXXSSGEDVCS TQEGDSGKG RCSTATEA++ G AVVRVGPVQHL FVEEEDEALL QEYDGHHICVYLPEEGFRRS+EEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSYPV RDLSAHTPM
Sbjct: 1 MSRRLALVSVFLAPYAAGAADAAGASGATSTGPAAHYETLFKSPWNEDNNKHGLQHLEHVNVC-IPSHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGSTQIHLPEGEPQVVPGTIGLVYGSSDLAEVIARLTENAITNGNENNRKNALEGTKFAWREEKEEGGEETGYVDVTCPYGNVYRLHKRKPSSSTIAPEATQAAXXXXXXXXXXALDPRGGRLPNVPAGGQGSSSLGLGISYVSFRVRPGTAAGIARFYRELFGAEAQEMGGXXXXXXXXXXXXSSGEDVCSVTQEGDSGKGLRCSTATEADKRRGTAAVVRVGPVQHLAFVEEEDEALLQQEYDGHHICVYLPEEGFRRSFEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSYPVARDLSAHTPM 435
BLAST of mRNA_E_fasciculatus_S2_contig702.15180.1 vs.
Match: Uncharacterized (protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A538QLZ7_9BACT) HSP 1 Score: 126 bits (317), Expect = 9.600e-29 Identity = 114/372 (30.65%), Postives = 150/372 (40.32%), Query Frame = 1
Query: 160 LQHLEHVNGRRMPLHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGTTQIHLPEGEPQVVPGTIGLVYGGSDLAEVIARLTENAVSNGNENNGKNALEGTKFAWREEKEEGGDQTGHVDVTCPYGNVYRLHKRKPSSSTISPEATQAAITSDRGDGAGALDPRGGRLPNVSAGGNASSSLGLGISYVSFRVRLGSAAGIARFYREVFGAEAEEMGGGXXXXXXXXXXXSSGEDVCSATQEGDSGKGSRCSTATEAERTDGATAV-VRVGPVQHLVFVEEEDEALLPQEYDGHHICVYLPEEGFRRSYEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSY 1272
+ HLEHVN R +P A Y LG D + G +W N G +Q HLP PQV+ G GLV D E+ ARL + L+GTKFA++ E GD H DVTCP+GN RLH+ PS+ R P + LG+ YV F VR G+AAGIARFYRE+ A A T T T+G+ A V VG Q L+F E D+ YDGHHI +Y+ + F P R + + + QYR ++ DP +G+ L +EHE+R ++HP Y
Sbjct: 16 IVHLEHVNVR-VPDQQLATQFYIVALGGTRDPY----LMVGLDNMWCNFGHSQFHLPTAAPQVLRGVTGLVV--PDFDELPARLAAAT----------DRLKGTKFAYKVE----GD---HADVTCPWGNRIRLHR--PSA----------------------------RFPRME----------LGMPYVEFPVREGTAAGIARFYREIMAAPA---------------------------------------TVT----TNGSVAAEVTVGTSQRLIFRETSDQLA---SYDGHHIAIYISD----------------FSGPHRKMVERGIVSEESNPYQYRFVEIADPESGKTLFEIEHEVRCVTHPMY 261
BLAST of mRNA_E_fasciculatus_S2_contig702.15180.1 vs.
Match: Uncharacterized (protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6PNE7_9BACT) HSP 1 Score: 125 bits (314), Expect = 2.480e-28 Identity = 112/368 (30.43%), Postives = 139/368 (37.77%), Query Frame = 1
Query: 169 LEHVNGRRMPLHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGTTQIHLPEGEPQVVPGTIGLVYGGSDLAEVIARLTENAVSNGNENNGKNALEGTKFAWREEKEEGGDQTGHVDVTCPYGNVYRLHKRKPSSSTISPEATQAAITSDRGDGAGALDPRGGRLPNVSAGGNASSSLGLGISYVSFRVRLGSAAGIARFYREVFGAEAEEMGGGXXXXXXXXXXXSSGEDVCSATQEGDSGKGSRCSTATEAERTDGATAVVRVGPVQHLVFVEEEDEALLPQEYDGHHICVYLPEEGFRRSYEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSY 1272
LEHVN R +P Y LGF D + G +W N+G Q HLP EPQVV G +GL D ++ RL +N K L GTKF++ E + HV +T P+GN R H P ++ LG+ YV F V G A GIARFYREVFGA V T G G A V+VGP Q L+F E + EYDGHHI +Y+ + F P R A L + QYR KD+VDP T +L LEHE+R +HP Y
Sbjct: 18 LEHVNVR-IPDQQIGTLFYVIGLGFTRDPY----LNVGLQNMWINLGQQQFHLPTAEPQVVRGVVGLCVPSLDA--LVQRL----------DNVKERLAGTKFSYAVEDK-------HVSITTPWGNKMRAHGPSPEFGDMT----------------------------------------LGMPYVEFPVPQGHATGIARFYREVFGA------------------------VAGVTSNG------------------GVAAHVKVGPGQELIFAETTEPLA---EYDGHHIAIYVSD----------------FGAPHRWLVDAKLLTEESNRYQYRFKDIVDPDTKRVLFTLEHEVRCATHPMY 260
BLAST of mRNA_E_fasciculatus_S2_contig702.15180.1 vs.
Match: Uncharacterized (protein n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5TJY3_9HYPH) HSP 1 Score: 125 bits (313), Expect = 3.870e-28 Identity = 111/371 (29.92%), Postives = 154/371 (41.51%), Query Frame = 1
Query: 160 LQHLEHVNGRRMPLHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGTTQIHLPEGEPQVVPGTIGLVYGGSDLAEVIARLTENAVSNGNENNGKNALEGTKFAWREEKEEGGDQTGHVDVTCPYGNVYRLHKRKPSSSTISPEATQAAITSDRGDGAGALDPRGGRLPNVSAGGNASSSLGLGISYVSFRVRLGSAAGIARFYREVFGAEAEEMGGGXXXXXXXXXXXSSGEDVCSATQEGDSGKGSRCSTATEAERTDGATAVVRVGPVQHLVFVEEEDEALLPQEYDGHHICVYLPEEGFRRSYEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSY 1272
+ HLEHVN +P A Y LG D ++ +W N+G +Q HLP G+PQ++ G +GLV D A ++ RL ++ALEG++FA E + H+D CP+GN R+H+ D R GR+ LG+ Y++F V +GSAAGI+RFYR++F A + + GS C A V VG Q L F E +D P YDGHHI VYL + F Y RGLV + + QYR D+ DP TG++L +EHE+RS++HP Y
Sbjct: 17 IVHLEHVNVS-VPDQRWATLFYVTGLGLTRDPYMMTSVDN----MWVNVGRSQFHLPTGKPQILRGHVGLVI--PDRAWLLKRLA----------GVRDALEGSRFAVTEHAD-------HIDAVCPWGNRIRVHEP---------------------------DARFGRVA-------------LGVGYITFDVPVGSAAGISRFYRDIFAAPSRVI----------------------------DADGSPC-------------AEVTVGRDQQLRFRETDDA---PPAYDGHHIQVYLAD--FSGPYRRLLERGLV--------------SQESSQWQYRFLDVADPDTGKVLFRVEHEVRSMTHPLY 263
BLAST of mRNA_E_fasciculatus_S2_contig702.15180.1 vs.
Match: Uncharacterized (protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534NHJ4_9DELT) HSP 1 Score: 118 bits (296), Expect = 6.590e-26 Identity = 107/373 (28.69%), Postives = 148/373 (39.68%), Query Frame = 1
Query: 169 LEHVNGRRMPLHDPAKH-LYYDI-LGFAPDARRAHNIGKGSGTIWANIGTTQIHLP-EGEPQVVPGTIGLVYGGSDLAEVIARLTENAVSNGNENNGKNALEGTKFAWREEKEEGGDQTGHVDVTCPYGNVYRLHKRKPSSSTISPEATQAAITSDRGDGAGALDPRGGRLPNVSAGGNASSSLGLGISYVSFRVRLGSAAGIARFYREVFGAEAEEMGGGXXXXXXXXXXXSSGEDVCSATQEGDSGKGSRCSTATEAERTDGATAVVRV--GPVQHLVFVEEEDEALLPQEYDGHHICVYLPEEGFRRSYEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSY 1272
LEHVN + + D AK L+Y + LGFA D + G G +WAN+G Q HLP PQ++PG IGLV DL E + E L+GT F+W E + + VTCP+GN +R H P S ++ LG+ YV F+ R G+A+GIARFY+EV A + ++ VVRV G Q L+F E +E + YDGHHI +Y+ F R Y +R + + ++ Q+R KDL+DP G + LEHE+RS+ H Y
Sbjct: 18 LEHVN---VEIPDQAKATLFYVVGLGFARDPY----LNVGLGNMWANVGEQQFHLPTRARPQIIPGLIGLVVPDLDLLESRLKAVEEP------------LKGTHFSWSAE-------SNSLAVTCPWGNRFRCHCPTPRFSDMA----------------------------------------LGMPYVEFQTRPGTASGIARFYQEVMQAPSSMF-------------------------------------------SENGMPVVRVEIGRNQWLLFRETSEEI---RPYDGHHIAIYVA--NFSRPYAFLQRHNRIMED--------------VQNHQFRFKDLIDPENGREVFRLEHEVRSLRHQMY 262
BLAST of mRNA_E_fasciculatus_S2_contig702.15180.1 vs.
Match: Uncharacterized (protein n=1 Tax=uncultured Solirubrobacteraceae bacterium TaxID=1162706 RepID=A0A6J4RHT5_9ACTN) HSP 1 Score: 115 bits (289), Expect = 5.740e-25 Identity = 114/368 (30.98%), Postives = 149/368 (40.49%), Query Frame = 1
Query: 169 LEHVNGRRMPLHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGTTQIHLPEGEPQVVPGTIGLVYGGSDLAEVIARLTENAVSNGNENNGKNALEGTKFAWREEKEEGGDQTGHVDVTCPYGNVYRLHKRKPSSSTISPEATQAAITSDRGDGAGALDPRGGRLPNVSAGGNASSSLGLGISYVSFRVRLGSAAGIARFYREVFGAEAEEMGGGXXXXXXXXXXXSSGEDVCSATQEGDSGKGSRCSTATEAERTDGATAVVRVGPVQHLVFVEEEDEALLPQEYDGHHICVYLPEEGFRRSYEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSY 1272
L+HVN R+P A Y LG D + G+ +WAN G +Q HLP G QV+ G GLV D A+++ RL + + LEGT+FA+ E E+G + TCP+GN R H P ++ P IT LGI YV F V +G+A GIARFYRE+ GA A A EA ATA V QHLVF E + A +DGHH+ V L + F Y + RGLV + QYR +D+VD TG +L +EHE+RS++HP Y
Sbjct: 21 LQHVN-LRVPDQQAATAFYISGLGLTRDPF----LMTGTDNMWANAGASQFHLPTGAAQVLRGATGLVV--PDRAQLLERLAK----------ARGQLEGTRFAFAE-TEDG------AEATCPWGNRIRCHA--PDAARFGP------IT-------------------------------LGIPYVEFDVPVGTAEGIARFYREILGAPA----------------------------------------AAEA-----ATARALVARDQHLVFRETDCPA---PPFDGHHVQVALAD--FGAPYAKLRERGLV--------------SREDNAWQYRFRDIVDLDTGAVLFTVEHEVRSMTHPMY 261
BLAST of mRNA_E_fasciculatus_S2_contig702.15180.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6A7LQA1_9CHLR) HSP 1 Score: 114 bits (284), Expect = 2.590e-24 Identity = 107/368 (29.08%), Postives = 141/368 (38.32%), Query Frame = 1
Query: 169 LEHVNGRRMPLHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGTTQIHLPEGEPQVVPGTIGLVYGGSDLAEVIARLTENAVSNGNENNGKNALEGTKFAWREEKEEGGDQTGHVDVTCPYGNVYRLHKRKPSSSTISPEATQAAITSDRGDGAGALDPRGGRLPNVSAGGNASSSLGLGISYVSFRVRLGSAAGIARFYREVFGAEAEEMGGGXXXXXXXXXXXSSGEDVCSATQEGDSGKGSRCSTATEAERTDGATAVVRVGPVQHLVFVEEEDEALLPQEYDGHHICVYLPEEGFRRSYEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSY 1272
+EHVN MP A Y LGF D N+G G+ +W N+G Q HLP +PQV+ G IGLV D R N V+ L T+F+W D H+ VTCP+GN R + P + +GI YV F R GSA GIA FY + GA A + ++GD G AVV VG Q L F E ++ + YDGHHI VY+ R Y + RGL+ + R + Q+R +D+VDP TG + +EHE+RS+ HP Y
Sbjct: 18 MEHVN-LTMPDQATATLFYIVGLGFTRDPYM--NVGLGN--MWVNVGEQQFHLPTRDPQVIAGHIGLVVPNLDAL----RDRLNTVAG--------PLADTRFSWS-------DADDHIAVTCPWGNRLRCYAPGPRFGDVM----------------------------------------VGIPYVEFLARPGSAHGIAGFYGRIMGAPA-------------------------SIEDGD---------------PRGMAAVVSVGRNQWLRFQETAEDV---RPYDGHHIAVYVA--NISRPYAFLQERGLLLESVRNH--------------QFRFQDIVDPETGGRVFAVEHEVRSMHHPMY 262
BLAST of mRNA_E_fasciculatus_S2_contig702.15180.1 vs.
Match: Uncharacterized (protein n=4 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A2V6ZED1_9BACT) HSP 1 Score: 113 bits (283), Expect = 3.510e-24 Identity = 104/369 (28.18%), Postives = 142/369 (38.48%), Query Frame = 1
Query: 169 LEHVNGRRMPLHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGTTQIHLPEGEPQVVPGTIGLVYGGSDLAEVIARLTENAVSNGNENNGKNALEGTKFAWREEKEEGGDQTGHVDVTCPYGNVYRLHKRKPSSSTISPEATQAAITSDRGDGAGALDPRGGRLPNVSAGGNASSSLGLGISYVSFRVRLGSAAGIARFYREVFGAEAEEMGGGXXXXXXXXXXXSSGEDVCSATQEGDSGKGSRCSTATEAERTDGATAVVRVGPVQHLVFVEE-EDEALLPQEYDGHHICVYLPEEGFRRSYEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSY 1272
LEHVN + +P A + Y LG D + G+ +W N G Q H+P G+P+V+ G +G V DL + RL + L GTKFA E + ++ VTCP+GN R H P ++ LGI YV F VR G+A GIA+FY+ GA A G +A V+VG QHLVF E E EA+ YDGHHI +Y+ F ++ + RGL+ + QYR KD+VDP T +L +EHE+RS +HP +
Sbjct: 20 LEHVNVK-IPDQVIATNFYVTALGLTRDPY----MNTGTENMWINAGQQQFHMPTGKPEVLRGIVGFVI--PDLEGLKMRL----------GGAREKLAGTKFACAAEDK-------YISVTCPWGNRLRFHAPGPEFGDMT----------------------------------------LGIPYVEFAVRPGTAVGIAKFYQAAMGAPATVSFNGN------------------------------------------VSARVQVGAKQHLVFRETTEPEAM----YDGHHIAIYVV--NFSGPHKWLKERGLI--------------SEESNPVQYRFKDIVDPETSRVLFTIEHEVRSATHPMF 262
BLAST of mRNA_E_fasciculatus_S2_contig702.15180.1 vs.
Match: Hypothetical (protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813ECT5_POLGL) HSP 1 Score: 114 bits (285), Expect = 6.320e-24 Identity = 108/389 (27.76%), Postives = 161/389 (41.39%), Query Frame = 1
Query: 160 LQHLEHVNGRRMPLHDPAKHLYYDILGFAPDARRAH---NIGKGSGT----IWANIGTTQIHLPEGEPQVVPGTIGLVYGGSDLAEVIARLTENAVSNGNENNGKNALEGTKFA----WREEKEEG-----GDQTGHVDVTCPYGNVYRLHKRKPSS-STISPEATQ-AAITSDRGDGAGALDPRGGRLPNVSAGGNASSSLGLGISYVSFRVRLGSAAGIARFYREVFGAEAEEMGGGXXXXXXXXXXXSSGEDVCSATQEGDSGKGSRCSTATEAERTDGATAVVRVGPVQHLVFVEEEDEALLPQEYDGHHICVYLPEEGFRRSYEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSY 1272
L LEH+N + ++ LGFA D+R A N+ GT +WAN G Q+H+P GEP+ G A+V A S G F+ EE+EEG G ++++ P G R+H+ + ++P Q + +++G G LP SL LGI Y+ +AAG+ R Y VFG EA GG G V +G Q LV+ E +P YDG+H+ +Y+ GF +Y +A+ GLV+ NPR + D+L++A+ ++RI LVDPA G+ L +EHE+R++SHP +
Sbjct: 26 LVSLEHLNVNVPSWSADCEAFWFQGLGFARDSRAATICGNVNNAGGTMKGLVWANAGLQQVHMPVGEPEPYASQCPPGVMGLAYADVTALKNSLTAS------------GVPFSELPSQAEEEEEGLLTESGLAPAQIELSSPTGVRLRVHRITAGTLGWLTPNGWQDPVVAAEQGVG----------LPGDRP------SLCLGIPYIRLLCPASTAAGLCRLYAAVFGTEATLCTGG-----------------------------------------SGVECWVPIGAHQWLVYEEVPTGQAVP--YDGYHVAIYI--NGFVEAYRQAQSLGLVWNNPRFPHLRYDSLDEAVGHSEFRILRLVDPANGQELISMEHEVRALSHPGF 341
BLAST of mRNA_E_fasciculatus_S2_contig702.15180.1 vs.
Match: Hypothetical (protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LFS2_9EUKA) HSP 1 Score: 114 bits (284), Expect = 8.250e-24 Identity = 111/362 (30.66%), Postives = 149/362 (41.16%), Query Frame = 1
Query: 223 YYDILGFAPD------ARRAHNIGKGSGTI--WANIGTTQIHLPEGEP----QVVPGTIGLVYGGSDLAEVIARLTENAVSNGNENNGKNALEGTKFAWREEKEEGGDQTGHVDVTCPYGNVYRLHKRKPSSSTISPEATQAAITSDRGDGAGALDPRGGRLPNVSAGGNASSSLGLGISYVSFRVRLGSAAGIARFYREVFGAEAEEMGGGXXXXXXXXXXXSSGEDVCSATQEGDSGKGSRCSTATEAERTDGATAVVRVGPVQHLVFVEE--EDEALLPQEYDGHHICVYLPEEGFRRSYEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHP 1266
++ ++G A D RR G GS T W NIG Q+H+P GEP QVV G IGL YG ++ + RL + E T FA G V CP+GN R +P ++ IT D G LP + GLG+ +V V +AAGI RFY E+F E T+ G RC +V +G Q L FVE+ +E L P YDG H+ +Y+ F R+Y L++ NPR DTLE AL ++R+ +VDPA+GE L LEHE+RS++HP
Sbjct: 68 WFGVVGGADDPRSQTVCRRTQESG-GSMTDMRWVNIGLQQLHMPLGEPEHSVQVVAGEIGLAYGKHEMHRLRERLANAEI------------EHTAFA-----------DGSVSFRCPHGNRLRA---EPWIGPLTWFGPAEVITPDAASG----------LPG-------GLTAGLGLRFVRVNVPPATAAGICRFYSEIF------------------------ESAALLTER----HGRRC-------------CIVPIGHHQSLEFVEQTARNEPLPP--YDGTHVAIYVNH--FERAYRRLASFNLLWNNPRFPHLTYDTLEDALHHHEFRLLHVVDPASGERLFTLEHEVRSLAHP 340 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig702.15180.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig702.15180.1 >prot_E_fasciculatus_S2_contig702.15180.1 ID=prot_E_fasciculatus_S2_contig702.15180.1|Name=mRNA_E_fasciculatus_S2_contig702.15180.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=437bp MSRRLALVSVFLAPYAAGAVDAAGAAVATSTGPAATYETLFKSPWNEDSNback to top mRNA from alignment at E_fasciculatus_S2_contig702:11647..17136- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig702.15180.1 ID=mRNA_E_fasciculatus_S2_contig702.15180.1|Name=mRNA_E_fasciculatus_S2_contig702.15180.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5490bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig702:11647..17136- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig702:11647..17136- >mRNA_E_fasciculatus_S2_contig702.15180.1 ID=mRNA_E_fasciculatus_S2_contig702.15180.1|Name=mRNA_E_fasciculatus_S2_contig702.15180.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1311bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig702:11647..17136- (Ectocarpus fasciculatus EfasUO2)back to top |