mRNA_E_fasciculatus_S2_contig70.15150.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig70.15150.1
Unique NamemRNA_E_fasciculatus_S2_contig70.15150.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig70.15150.1 vs.
Match: Vacuolar (protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT75_ECTSI)

HSP 1 Score: 427 bits (1098), Expect = 6.590e-123
Identity = 837/843 (99.29%), Postives = 841/843 (99.76%), Query Frame = 1 
Query:  688 REVAACLCNLSLSEQDRVAVAARCVPALVALSQGGDLEAARQAIGTLANLAEEIDTHELIAKSGGGRVMTGLMQHDALDVFREASRAISNLLTSFEHQAVIIEQGLAGLNALAESTDPECQYHAALSFRKLSPNLASHRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQLARSLDVASQRYSTLALCNLSSGEHKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPPNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTKSAVMHEDGLFPLLELVNSEDGDCVRTAVYALGSLCESDPVKARLIELGAVVNVVGQASFGDIEVKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKLLPKGKEKANIGFGATVLQSNTDSKARRAQKQTQEHLDQSLRAG 3216
            REVAACLCNLSLSEQDRVAVAARCVPALVALSQGGDLEAARQAIGTLANLAEEIDTHELIAKSGGGRVMTGLM+HDALDVFREASRAISNLLTSFEHQAVIIEQGLAGLNALAESTDPECQYHAALSFRKLSPNLASHRG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQLARSLDVASQRYSTLALCNLSSGEHKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPPNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTK+AVMHEDGLFPLLELVNS+DGDCVRTAVYALGSLCESDPVKARLIELGAVVNVVGQASFGDIEVK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKLLPKGKEKANIGFGATVLQSNTDSKARRAQKQTQEHL+QSLRAG
Sbjct: 2939 REVAACLCNLSLSEQDRVAVAARCVPALVALSQGGDLEAARQAIGTLANLAEEIDTHELIAKSGGGRVMTGLMKHDALDVFREASRAISNLLTSFEHQAVIIEQGLAGLNALAESTDPECQYHAALSFRKLSPNLASHRGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQLARSLDVASQRYSTLALCNLSSGEHKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPPNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTKTAVMHEDGLFPLLELVNSDDGDCVRTAVYALGSLCESDPVKARLIELGAVVNVVGQASFGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKLLPKGKEKANIGFGATVLQSNTDSKARRAQKQTQEHLEQSLRAG 3781
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig70.15150.1 vs.
Match: Vacuolar (protein 8 n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZK5_9STRA)

HSP 1 Score: 199 bits (505), Expect = 8.300e-49
Identity = 102/139 (73.38%), Postives = 117/139 (84.17%), Query Frame = 1 
Query:  688 REVAACLCNLSLSEQDRVAVAARCVPALVALSQGGDLEAARQAIGTLANLAEEIDTHELIAKSGGGRVMTGLMQHDALDVFREASRAISNLLTSFEHQAVIIEQGLAGLNALAESTDPECQYHAALSFRKLSPNLASHR 1104
            REVAACLCNLSLSE DRVA+AA CV  LV LSQGGDLE ARQ++GTLAN+AE+ +TH  I K+GGGRVM  LM HD++D+ REASRAISNLL+SF HQA IIE G+ GL ALA S D ECQY+AALSFRKLSPN+ASH+
Sbjct:   24 REVAACLCNLSLSEPDRVAIAAECVEPLVFLSQGGDLETARQSVGTLANIAEDTETHGYIGKAGGGRVMIMLMDHDSIDIHREASRAISNLLSSFHHQAEIIEDGVPGLVALATSPDAECQYNAALSFRKLSPNIASHK 162
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig70.15150.1 vs.
Match: Vacuolar (protein 8 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEI2_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.960e-31
Identity = 77/124 (62.10%), Postives = 93/124 (75.00%), Query Frame = 1 
Query:  736 RVAVAARCVPALVALSQGGDLEAARQAIGTLANLAEEIDTHELIAKSGGGRVMTGLMQHDALDVFREASRAISNLLTSFEHQAVIIEQGLAGLNALAESTDPECQYHAALSFRKLSPNLASHRG 1107
            R+ VA  C+PA+V L+Q GD EAARQA+G+LANLAE++ TH  +A  GG R M  L+ HDA+D+ REASRAI+NLLTSF HQA II  GL GL  LA   D ECQY+AALSFRKL+PN  +H G
Sbjct: 2979 RMDVAKVCLPAMVHLAQCGDREAARQAMGSLANLAEDMHTHTHVAAYGGARCMVALVDHDAVDIHREASRAIANLLTSFHHQATIISDGLPGLVHLALGPDAECQYNAALSFRKLTPNRDAHEG 3102
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig70.15150.1 vs.
Match: Vacuolar (protein 8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6R1_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.750e-30
Identity = 82/154 (53.25%), Postives = 101/154 (65.58%), Query Frame = 1 
Query:  688 REVAACLCNLSL---SEQDRVAVAARCVPALVALSQGG-------------DLEAARQAIGTLANLAEEIDTHELIAKSGGGRVMTGLMQHDALDVFREASRAISNLLTSFEHQAVIIEQGLAGLNALAESTDPECQYHAALSFRKLSPNLASH 1101
            RE AACLCNL+L   +   R A+A  CVPALVAL++G              D+E ARQAIG LANLAE+  TH  IA  GG   +  +    ALD++REASRA+ NLLTS E QA ++E+GL G+  LA + D ECQYHAALS RKL+PN A+H
Sbjct: 3148 REAAACLCNLTLGAAAPAQRAALADACVPALVALARGXXXXXXXXXXXXXXDVETARQAIGALANLAEDPATHARIAAEGGTEALAAVAAAAALDMYREASRAVCNLLTSAELQAAVVERGLPGIVTLASAPDAECQYHAALSLRKLTPNTAAH 3301
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig70.15150.1 vs.
Match: Vacuolar (protein 8 (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX95_9ARCH)

HSP 1 Score: 128 bits (321), Expect = 4.400e-26
Identity = 81/181 (44.75%), Postives = 105/181 (58.01%), Query Frame = 1 
Query:  688 REVAACLCNLSLSE--QDRVAVAARCVPALVALSQ--------------------------GGD---------------LEAARQAIGTLANLAEEIDTHELIAKSGGGRVMTGLMQHDALDVFREASRAISNLLTSFEHQAVIIEQGLAGLNALAESTDPECQYHAALSFRKLSPNLASH 1101
            REVAA LC+LSLS+  Q R+ +A +C+ ALV L+                           GG+               ++ ARQAIG +ANLAEE+DTHE IAK+   R    L    ++D+ REA+RAI+NLL+SF HQA IIE+G+ GL AL+ S D E  YH+ALSFRKL PN+ SH
Sbjct:  986 REVAATLCSLSLSKNTQHRMEIAYKCLQALVRLASVAGSEHAAISASIEKKKKEAGVEDDLGGNSGNFVPELSAHQKSLIDIARQAIGAMANLAEEVDTHEFIAKAQASRAFIALESFHSIDIQREATRAIANLLSSFRHQATIIEEGIPGLVALSYSEDLEACYHSALSFRKLGPNMKSH 1166
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig70.15150.1 vs.
Match: Vacuolar (protein 8 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T4K8_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.420e-25
Identity = 66/138 (47.83%), Postives = 88/138 (63.77%), Query Frame = 1 
Query:  688 REVAACLCNLSLSEQDRVAVAARCVPALVALSQGGDLEAARQAIGTLANLAEEIDTHELIAKSGGGRVMTGLMQHDALDVFREASRAISNLLTSFEHQAVIIEQGLAGLNALAESTDPECQYHAALSFRKLSPNLASH 1101
            RE +ACLCNLSL+ + R  +   C+  L  L    D +  RQA+G LAN+ E  +TH+ + KSG       L+QH ++D+ REASRAI+NLL S      +I  GL  L +L  ++DPECQY+A+LSFRKLSPN  SH
Sbjct:  156 REFSACLCNLSLNVRCRADIVKTCIKELNRLLSSNDTDTVRQAMGALANITENQETHDTMQKSGTSNSTIALLQHSSMDIKREASRAIANLLGSKNQHCEVIRGGLVHLISLGVTSDPECQYNASLSFRKLSPNKDSH 293
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig70.15150.1 vs.
Match: Vacuolar (protein 8 (Fragment) n=5 Tax=Sar TaxID=2698737 RepID=A0A812KVL6_9DINO)

HSP 1 Score: 122 bits (305), Expect = 4.090e-24
Identity = 67/142 (47.18%), Postives = 94/142 (66.20%), Query Frame = 1 
Query:  688 REVAACLCNLSLSEQDRVAVAA--RCVPALVALSQGGDLEAARQAIGTLANLAEEIDTHELIAKSGGGRVMTGLMQHDALDVFREASRAISNLLTSFEHQAVIIEQGLAGLNALAESTDPECQYHAALSFRKLSPNLASHRG 1107
            RE A  + N++L +  + A AA    +  LV L Q  D E AR A G LAN+AE++ TH  I+  GGGR M GL+ H +++V REASRA++NLL SF+    +I   L G+  LA ++D EC+YHA+L++RKL+PNLA+H G
Sbjct: 3132 RETAVAIFNVTLDDVAKPAAAADPALMGGLVVLCQSPDEEVARFACGALANIAEDLATHPSISAVGGGRFMVGLIHHGSIEVHREASRALANLLASFDVHGDVIAAALPGIARLAFTSDEECRYHASLAYRKLAPNLAAHDG 3273
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig70.15150.1 vs.
Match: Vacuolar (protein 8 n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P367_9STRA)

HSP 1 Score: 115 bits (287), Expect = 5.310e-22
Identity = 63/133 (47.37%), Postives = 86/133 (64.66%), Query Frame = 1 
Query:  688 REVAACLCNLSLSEQDRVAVAARCVPALVALSQGGDLEAARQAIGTLANLAEEIDTHELIAKSGGGRVMTGLMQHDALDVFREASRAISNLLTSFEHQAVIIEQGLAGLNALAESTDPECQYHAALSFRKLSP 1086
            RE+AACLCNLS S   ++ +  RC+  L++L++  D EA RQ++G LANL E++ TH + A S   R +   + H+ +DV REASRA+SNL+TS      I+E G+  L  L  S D EC YH ALS RKL+P
Sbjct: 2890 RELAACLCNLSASSH-KLIITDRCIRTLLSLAKTADEEALRQSMGALANLCEDVTTHSIFAASHALRSVIDCLCHEKIDVHREASRAVSNLVTSCCFHGAILEFGMIQLLHLCSSEDKECLYHVALSLRKLAP 3021
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig70.15150.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQA6_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.790e-19
Identity = 52/92 (56.52%), Postives = 65/92 (70.65%), Query Frame = 1 
Query:  688 REVAACLCNLSLSEQDRVAVAARCVPALVALSQGGDLEAARQAIGTLANLAEEIDTHELIAKSGGGRVMTGLMQHDALDVFREASRAISNLL 963
            REVAA LCNL+L    R+  A  C+PA+V L+Q GD E ARQA+G LANLAE  +TH  +A  GG R +  L++H  +DV REASRAI+NLL
Sbjct:   31 REVAAGLCNLTLEASARMEAARCCLPAIVNLAQCGDREVARQALGALANLAESPETHAHVAACGGSRCVVALVEHTDVDVHREASRAIANLL 122
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig70.15150.1 vs.
Match: Vacuolar (protein 8 (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4S5_HETAK)

HSP 1 Score: 102 bits (255), Expect = 4.330e-19
Identity = 66/141 (46.81%), Postives = 89/141 (63.12%), Query Frame = 1 
Query:  688 REVAACLCNLSLSEQDRVAVAARCVPA-LVALSQGGDLEAARQAIGTLANLAEEIDTH-ELIAKSGGGRVMTGLMQHDALDVFREASRAISNLL-TSFEHQAVIIEQGLAGLNALAESTDPECQYHAALSFRKLSPNLASH 1101
            RE AA LCNLS+S+++++ +A   V   L+ L Q  D+EAAR A   +AN+AE+   H  L+  +     +  LM+   L V REA+RA++NLL T   H   + E GL  LN +A S D ECQY+AAL FRKLSPNLA+H
Sbjct:   86 RECAALLCNLSVSDENKLEIALGPVLLPLLQLCQSADVEAARLACAAVANVAEDGAAHGPLVEAANAVHHLCYLMRSRHLAVHREAARAVANLLSTERAHAPFLYENGLRSLNLVARSPDNECQYNAALCFRKLSPNLANH 226
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig70.15150.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Vacuolar6.590e-12399.29protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT... [more]
Vacuolar8.300e-4973.38protein 8 n=2 Tax=Phaeomonas parva TaxID=124430 Re... [more]
Vacuolar1.960e-3162.10protein 8 n=1 Tax=Pelagomonas calceolata TaxID=356... [more]
Vacuolar1.750e-3053.25protein 8 n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
Vacuolar4.400e-2644.75protein 8 (Fragment) n=1 Tax=archaeon TaxID=190666... [more]
Vacuolar1.420e-2547.83protein 8 n=1 Tax=Ditylum brightwellii TaxID=49249... [more]
Vacuolar4.090e-2447.18protein 8 (Fragment) n=5 Tax=Sar TaxID=2698737 Rep... [more]
Vacuolar5.310e-2247.37protein 8 n=2 Tax=Leptocylindrus danicus TaxID=163... [more]
Hypothetical1.790e-1956.52protein (Fragment) n=1 Tax=Aureoumbra lagunensis T... [more]
Vacuolar4.330e-1946.81protein 8 (Fragment) n=2 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig70contigE_fasciculatus_S2_contig70:24541..29689 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score431.0
Seed ortholog evalue1.6e-117
Seed eggNOG ortholog2880.D7FT75
Model size3219
KEGG koko:K08332
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.nucleus-vacuole junction assembly
EggNOG OGsKOG0167@1,KOG0167@2759,KOG4224@1,KOG4224@2759
Cds size3213
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig70.15150.1prot_E_fasciculatus_S2_contig70.15150.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig70 24547..29689 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842359.1441603-UTR-E_fasciculatus_S2_contig70:24540..245461696842359.1441603-UTR-E_fasciculatus_S2_contig70:24540..24546Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig70 24541..24546 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842359.157416-CDS-E_fasciculatus_S2_contig70:24546..247861696842359.157416-CDS-E_fasciculatus_S2_contig70:24546..24786Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig70 24547..24786 +
1696842359.1682441-CDS-E_fasciculatus_S2_contig70:25133..254511696842359.1682441-CDS-E_fasciculatus_S2_contig70:25133..25451Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig70 25134..25451 +
1696842359.1788464-CDS-E_fasciculatus_S2_contig70:26063..261921696842359.1788464-CDS-E_fasciculatus_S2_contig70:26063..26192Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig70 26064..26192 +
1696842359.201396-CDS-E_fasciculatus_S2_contig70:26418..269551696842359.201396-CDS-E_fasciculatus_S2_contig70:26418..26955Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig70 26419..26955 +
1696842359.217325-CDS-E_fasciculatus_S2_contig70:27335..289431696842359.217325-CDS-E_fasciculatus_S2_contig70:27335..28943Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig70 27336..28943 +
1696842359.2277584-CDS-E_fasciculatus_S2_contig70:29308..296891696842359.2277584-CDS-E_fasciculatus_S2_contig70:29308..29689Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig70 29309..29689 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig70.15150.1

>prot_E_fasciculatus_S2_contig70.15150.1 ID=prot_E_fasciculatus_S2_contig70.15150.1|Name=mRNA_E_fasciculatus_S2_contig70.15150.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=1071bp
MAESGCPASLIRLTSCPDVDCKRLAVMTLCNLTANAETRAAATRGGGLQA
AVRLTSDGDGECRRYAATCVCNMANDHQMQLQVVVHGGLPPIMTMATSGD
PDDQRHAAMALGNIAANEGNHPQLVAKGAIQALVALSSSSEVDVREYAGF
ALANLASNADYLDAIGARGGIDPLVKLAGSANVHTQCLAMAALRRMAIPQ
DNRHLLVEAGILATLARAGRSGEVEIQREVAACLCNLSLSEQDRVAVAAR
CVPALVALSQGGDLEAARQAIGTLANLAEEIDTHELIAKSGGGRVMTGLM
QHDALDVFREASRAISNLLTSFEHQAVIIEQGLAGLNALAESTDPECQYH
AALSFRKLSPNLASHRGMCFDGGLKALFHLLKAKDFKTRRQAVTALRDLC
AHADHKFKIADEGGVEALVSAALEREIELQILAVAGLRHLSLLDPLKQAI
VSAGALRPIVRCVKWANEDLQCQLAAALANLSEEIQNQITMVEDGAVQAL
VALARAENDEIQQDCSRALSNLSSNEENHTLVYRLGGLRALVGLTNSTED
VCQRYAAFGLRFLCSNPEVRVSIVQDGLIKPFLALAQSPLIEYQRTAAAA
FASFSLNDENKQKMVRESCLGQILACCLYSDLEVVRNCTFALANLADSLD
LQSDVVREGGIEILQKVGMHDDARVQRDAARTLACLSVSDDVKDAIITKG
ALPTLFQLARSLDVASQRYSTLALCNLSSGEHKARIVSEGAVRPLTFLAR
FPDLEIQRYAALAIAGLALGDHGKPPNKLRITEEGALKPLIDLVRFPEAE
VQRCACLAVNAVALGTHSSTKSAVMHEDGLFPLLELVNSEDGDCVRTAVY
ALGSLCESDPVKARLIELGAVVNVVGQASFGDIEVKRAAGYFLALLCETR
EFHDDLAREGGLQAVVALASLEDVECQEYAAFSLAHLSSNHEYQVTLVEL
GALRPLVSMMAVEAEPRHYAGLALLKLADNFENHIRIAEEGGIQALLRLG
RARSTDEELQYKAALTVGHLASNAVKLLPKGKEKANIGFGATVLQSNTDS
KARRAQKQTQEHLDQSLRAG*
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mRNA from alignment at E_fasciculatus_S2_contig70:24541..29689+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig70.15150.1 ID=mRNA_E_fasciculatus_S2_contig70.15150.1|Name=mRNA_E_fasciculatus_S2_contig70.15150.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5149bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig70:24541..29689+ (Ectocarpus fasciculatus EfasUO2)
ATCGTCATGGCCGAATCTGGTTGCCCGGCGTCTCTGATTCGACTGACATC
TTGTCCTGATGTGGACTGCAAGCGTCTGGCGGTGATGACGCTCTGCAACC
TCACCGCGAACGCGGAGACGCGTGCGGCAGCTACCCGAGGGGGTGGGCTG
CAAGCCGCCGTGAGGTTAACGTCGGACGGGGACGGGGAGTGCAGGAGGTA
CGCCGCCACGTGCGTCTGCAACATGGCCAACGATCACCAGATGCAGGTGA
GGAGTGGAGAAAGATCGATCGGGGGGAAAAGGCGTTGTGTTGGCTTGGTT
CTGCTGAGCGGCATGCGAATCCCAAAAGACAGATGAAGGTGGGGTGATGC
GGGAAGGAGTCGGGCCGATCAGAACCGGCGCTGAGTTTCCGAGTGTGTGG
CCGGGTGGCACGATGAAACCAATGGAACTGAGTTTATCCTCTTACCCGGC
GAAAATCGGTTTTTGAATAAAAGACAACAACAGCGATTTTGAAGAATGGT
CGCTCTGGCGTTGTATCTCGTACGTACTGCCAACACCGCTACTACCCAAT
CTCGACACCACCACTGCTACAACAACCGCCAACACTGTCACAGCTACAAG
TGGTAGTTCACGGTGGCCTCCCGCCCATAATGACGATGGCGACGAGCGGC
GACCCAGACGACCAGCGGCACGCGGCGATGGCCTTAGGAAACATTGCCGC
CAACGAAGGAAATCACCCCCAGCTTGTGGCGAAGGGGGCGATCCAGGCCC
TCGTAGCGTTGTCCAGCTCTTCGGAGGTGGATGTGCGTGAGTATGCGGGC
TTCGCGCTGGCGAACCTCGCCAGTAACGCGGACTATTTGGACGCGATCGG
GGCGAGGGGGGGGATTGACCCCCTCGTCAAGCTTGCTGGTTCCGCAAATG
TTCACACTCAGGTAAGACAGATGGAGGGCAGTACCGGTAGGTACTACTAA
ATGGTGTCCAACGCGTTTTCTTGGGTGGGTAGGCGTTGTAGGAGGGGGGG
CTCACTTCATCCCATTGCCTGTTTGCACCATTGGAGGGCCCGTTGGGTAA
GAATCCCCCAGATAGTCTGAAACACAGCTTTGAAAATTCTTCTGGTCTGT
TTCAGCCGCATGTTGTCAACAGAGAGAGAAAAGAGAAAGAGACAACGACT
ACACTGGAAGCGGTAAGTTTCTTCGCAACAGCTGGTTTGCGCTCGTCGTT
GCTCGTGTCCACCCACGCTCAAGTACACGCGCGCCACCATTCTATAGATT
ACATTGCGACAGGTTCGCGCCTGTATCTCATCTGTGGGAAACAGTTTGTC
AACAAATGTGTCTGCTTGAGATTTTTTACGGGGCATCTCGGCTTGAGAAA
GAGACCGAGACCTATTGTTTCGCTTCCAATTGCCCACCGATGTGGTAAAA
CCGGCCGAAAGATATTCCCGCCGTCGGAGAAATGGACGCACAACAATACC
TGCCTTCTTGGAACCATACGAAAACACAAGTTCCATCTTTGCGTCGTCCC
TGGTCATGTGACACGTGACGCAGTGCCTCGCCATGGCGGCCTTGCGCCGC
ATGGCCATTCCGCAAGACAATCGACATCTCTTGGTGGAGGCGGGAATCCT
CGCCACGTTGGCCCGCGCGGGACGGAGCGGCGAGGTCGAAATCCAAAGAG
AGGTGACTGGCTGCCTACCATACGCCGATGGCTCACAAGCATGAGTACCC
AAGCAAGCACCTAGCGCTATACATGACAGCTGTTGGAGAAAATAATATTC
AGGGGTGCGTTAGGTTGAGTATTCGGCGCTGTTGAGGTATTCGGTTGAGT
GTCGTTGTCCTTGGAACAGGGTTGAACTTCGTGTTCAATATCCTCACACT
AACTCGTTTCAACCAAACCACCAAATAGGTGGCGGCGTGCCTATGCAACC
TGTCCCTCAGCGAGCAAGACCGAGTCGCGGTTGCCGCACGATGCGTGCCC
GCGTTGGTGGCCCTATCTCAAGGGGGCGATCTCGAGGCGGCAAGACAGGC
GATAGGCACCCTTGCAAATCTGGCGGAAGAGATCGACACGCACGAGCTCA
TTGCCAAGTCGGGGGGCGGGAGGGTGATGACGGGGCTCATGCAGCACGAC
GCCCTCGACGTTTTCCGAGAGGCGAGTCGGGCAATCTCCAACCTACTGAC
TAGCTTTGAACACCAGGCCGTCATCATCGAGCAGGGACTCGCCGGGTTGA
ATGCACTCGCCGAGAGCACTGACCCAGAGTGCCAGTACCACGCCGCGCTG
AGCTTCCGCAAGCTCTCGCCGAACCTCGCATCCCACCGCGGAATGTGCTT
CGACGGCGGGCTCAAGGCTCTGTTTCACCTTCTCAAGGCTAAAGATTTCA
AGACAAGGCGGCAGGCGGTGACAGCTCTTCGAGACCTTTGCGCGCATGCG
GACCACAAGTTTAAGGTGCGCAGCTCAGGGTTCCTTCGTCCTGCGCCCCT
TGTGTAGCACCGACCAGAACGTGTTGGGCGGGTAAACCTCTTGCAATACC
ATGCAAAGTTTGTCAGTTTATCGGAAGTATCCTGCCTCATATTGTGAGTT
TGCATGTTTTCGCGGCCAACGTATCTCGTGTGTCGGAGCGCAAAGCTGTT
GCCCTAGGCTCAGACCGTGGGGTGCTCTTTCGGCGCCAATCTTGCAAGAT
CCCTTCCCATTTCGGTCGAAACCCTTTGACGCAAACCGTCCGTTCTACCT
GGACTTGAATGCATTGACTTGCCCCCTCCAAGTTGTCACCATTCGCGTCT
ATCACCCCAACATGACGTCACTTATTTCGCCGACGTGTATCGTAGATTGC
CGACGAAGGCGGAGTGGAAGCCCTCGTTTCCGCAGCCTTGGAACGCGAGA
TCGAGCTCCAGATCCTTGCAGTAGCGGGACTGCGCCACCTGTCGCTGCTT
GACCCCCTCAAGCAGGCCATCGTGTCGGCCGGGGCGCTTCGGCCAATCGT
TCGCTGCGTCAAGTGGGCGAACGAGGACCTCCAGTGCCAGCTCGCCGCGG
CCCTGGCCAACCTGTCGGAAGAAATCCAGAACCAGATTACCATGGTGGAG
GACGGAGCGGTACAGGCGCTCGTCGCGCTCGCGCGGGCGGAGAACGACGA
GATACAGCAGGACTGCTCCCGGGCGCTGAGCAACCTCAGCAGCAACGAAG
AGAACCACACCCTGGTGTACAGGCTGGGCGGCCTCCGTGCGTTGGTGGGG
CTGACGAACTCAACCGAGGACGTGTGCCAAAGGTACGCGGCGTTCGGGCT
GAGGTTCTTGTGCAGCAACCCGGAGGTGCGCGTGAGCATTGTCCAGGACG
GGTTGATCAAGCCCTTCCTGGCGCTGGCGCAAAGCCCGCTCATCGAGTAC
CAGCGGACCGCGGCCGCGGCGTTCGCGAGCTTCTCCCTCAACGACGAAAA
CAAGCAGAAGATGGTGCGGGAGAGCTGCCTGGGGCAGATCCTGGCGTGCT
GCCTCTACTCGGACCTCGAGGTCGTCCGAAACTGCACCTTCGCCCTCGCC
AATCTCGCGGACTCTTTGGACCTGCAGAGCGACGTCGTGAGGGAGGGAGG
CATCGAGATCCTGCAGAAGGTTGGCATGCACGACGACGCGCGCGTCCAGC
GCGATGCCGCCCGCACCCTCGCCTGTCTTAGCGTCAGCGACGACGTCAAG
GACGCCATCATCACGAAGGGCGCGCTGCCGACGCTCTTCCAGCTGGCCCG
CTCTCTCGACGTCGCCAGCCAGCGATACTCCACCCTCGCGCTCTGCAACC
TGTCTTCCGGGGAGCACAAGGCGCGAATCGTCAGCGAGGGGGCCGTTCGG
CCGCTCACGTTCCTGGCCCGGTTCCCCGACCTCGAGATACAGCGGTACGC
GGCGCTCGCGATCGCGGGGCTGGCCCTGGGAGACCACGGCAAGCCACCAA
ACAAGCTGCGGATAACCGAGGAGGGTGCTTTGAAGCCGCTCATTGACCTC
GTACGATTCCCGGAGGCCGAGGTGCAGCGGTGCGCGTGCCTTGCCGTGAA
CGCCGTGGCCCTCGGCACCCACAGCTCGACGAAGTCGGCGGTCATGCACG
AGGACGGGCTCTTCCCTCTCCTGGAGCTGGTCAACTCCGAGGACGGCGAC
TGCGTGAGGACGGCGGTGTACGCGCTGGGTTCCCTGTGCGAGAGCGACCC
GGTCAAGGCGAGGCTCATCGAGCTCGGTGCCGTCGTGAACGTGGTCGGCC
AAGCCAGCTTTGGCGATATAGAGGTCAAGCGCGCCGCCGGGTACTTCCTG
GCCCTGTTGTGTGAGACGAGAGAGTTTCACGACGACCTGGCGAGGGAGGG
TGGACTCCAAGCGGTGGTGGCGCTCGCGAGTCTTGAAGATGTCGAGTGTC
AGGAATACGCAGCGTTTTCCTTGGCGCACTTGTCGAGCAACCACGAGTAC
CAGGTAATTTATGTGCGAGGGAATGTTTTTTTCTAAGGGGCGTAGTCGGC
CGGGTGGACTACCCACCACCCGAAGACGGCACACCTCCACCGGGGTCGAA
ACGCGTGCATTTCGCCTCCTCGGCAAGGAGGTCTATGACCGGCGTCGCAA
AGTACAAAATACCATGTGGCAACCTCTTGTGCAGAAGGTAGTGTTCTGAA
CGCCAGTGGTCCACCGAAGTGAAGTTGCAACGCAGGAAAGTAATGGTCCC
GCTGGAATTGCCGTGACTACAGGCATTCTTCGATCGTATGAATCCAGCTC
GCGCCTATCCTCAAATTTGCTCCCCGCCGTCTCATGCGACCACCTCTACG
CGAATACACAATGCGAAGGTTACGCTTGTGGAGCTCGGCGCACTGCGTCC
CCTGGTGAGCATGATGGCGGTTGAGGCCGAGCCACGCCATTACGCCGGGC
TTGCCCTCCTCAAGCTGGCCGACAACTTCGAGAACCACATCCGCATCGCC
GAAGAGGGCGGCATCCAAGCCCTCCTCAGACTCGGCCGCGCGCGGTCCAC
GGACGAGGAGCTGCAATACAAGGCCGCGCTGACCGTGGGTCATCTGGCAT
CCAACGCAGTAAAGCTGCTACCCAAGGGCAAGGAGAAGGCGAACATCGGG
TTTGGAGCAACCGTGCTGCAGAGCAACACCGACAGCAAGGCGCGGCGAGC
ACAGAAGCAGACGCAGGAACATTTGGACCAGTCATTGCGAGCTGGATAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig70:24541..29689+

>mRNA_E_fasciculatus_S2_contig70.15150.1 ID=mRNA_E_fasciculatus_S2_contig70.15150.1|Name=mRNA_E_fasciculatus_S2_contig70.15150.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=3213bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig70:24541..29689+ (Ectocarpus fasciculatus EfasUO2)
ATGGCCGAATCTGGTTGCCCGGCGTCTCTGATTCGACTGACATCTTGTCC
TGATGTGGACTGCAAGCGTCTGGCGGTGATGACGCTCTGCAACCTCACCG
CGAACGCGGAGACGCGTGCGGCAGCTACCCGAGGGGGTGGGCTGCAAGCC
GCCGTGAGGTTAACGTCGGACGGGGACGGGGAGTGCAGGAGGTACGCCGC
CACGTGCGTCTGCAACATGGCCAACGATCACCAGATGCAGCTACAAGTGG
TAGTTCACGGTGGCCTCCCGCCCATAATGACGATGGCGACGAGCGGCGAC
CCAGACGACCAGCGGCACGCGGCGATGGCCTTAGGAAACATTGCCGCCAA
CGAAGGAAATCACCCCCAGCTTGTGGCGAAGGGGGCGATCCAGGCCCTCG
TAGCGTTGTCCAGCTCTTCGGAGGTGGATGTGCGTGAGTATGCGGGCTTC
GCGCTGGCGAACCTCGCCAGTAACGCGGACTATTTGGACGCGATCGGGGC
GAGGGGGGGGATTGACCCCCTCGTCAAGCTTGCTGGTTCCGCAAATGTTC
ACACTCAGTGCCTCGCCATGGCGGCCTTGCGCCGCATGGCCATTCCGCAA
GACAATCGACATCTCTTGGTGGAGGCGGGAATCCTCGCCACGTTGGCCCG
CGCGGGACGGAGCGGCGAGGTCGAAATCCAAAGAGAGGTGGCGGCGTGCC
TATGCAACCTGTCCCTCAGCGAGCAAGACCGAGTCGCGGTTGCCGCACGA
TGCGTGCCCGCGTTGGTGGCCCTATCTCAAGGGGGCGATCTCGAGGCGGC
AAGACAGGCGATAGGCACCCTTGCAAATCTGGCGGAAGAGATCGACACGC
ACGAGCTCATTGCCAAGTCGGGGGGCGGGAGGGTGATGACGGGGCTCATG
CAGCACGACGCCCTCGACGTTTTCCGAGAGGCGAGTCGGGCAATCTCCAA
CCTACTGACTAGCTTTGAACACCAGGCCGTCATCATCGAGCAGGGACTCG
CCGGGTTGAATGCACTCGCCGAGAGCACTGACCCAGAGTGCCAGTACCAC
GCCGCGCTGAGCTTCCGCAAGCTCTCGCCGAACCTCGCATCCCACCGCGG
AATGTGCTTCGACGGCGGGCTCAAGGCTCTGTTTCACCTTCTCAAGGCTA
AAGATTTCAAGACAAGGCGGCAGGCGGTGACAGCTCTTCGAGACCTTTGC
GCGCATGCGGACCACAAGTTTAAGATTGCCGACGAAGGCGGAGTGGAAGC
CCTCGTTTCCGCAGCCTTGGAACGCGAGATCGAGCTCCAGATCCTTGCAG
TAGCGGGACTGCGCCACCTGTCGCTGCTTGACCCCCTCAAGCAGGCCATC
GTGTCGGCCGGGGCGCTTCGGCCAATCGTTCGCTGCGTCAAGTGGGCGAA
CGAGGACCTCCAGTGCCAGCTCGCCGCGGCCCTGGCCAACCTGTCGGAAG
AAATCCAGAACCAGATTACCATGGTGGAGGACGGAGCGGTACAGGCGCTC
GTCGCGCTCGCGCGGGCGGAGAACGACGAGATACAGCAGGACTGCTCCCG
GGCGCTGAGCAACCTCAGCAGCAACGAAGAGAACCACACCCTGGTGTACA
GGCTGGGCGGCCTCCGTGCGTTGGTGGGGCTGACGAACTCAACCGAGGAC
GTGTGCCAAAGGTACGCGGCGTTCGGGCTGAGGTTCTTGTGCAGCAACCC
GGAGGTGCGCGTGAGCATTGTCCAGGACGGGTTGATCAAGCCCTTCCTGG
CGCTGGCGCAAAGCCCGCTCATCGAGTACCAGCGGACCGCGGCCGCGGCG
TTCGCGAGCTTCTCCCTCAACGACGAAAACAAGCAGAAGATGGTGCGGGA
GAGCTGCCTGGGGCAGATCCTGGCGTGCTGCCTCTACTCGGACCTCGAGG
TCGTCCGAAACTGCACCTTCGCCCTCGCCAATCTCGCGGACTCTTTGGAC
CTGCAGAGCGACGTCGTGAGGGAGGGAGGCATCGAGATCCTGCAGAAGGT
TGGCATGCACGACGACGCGCGCGTCCAGCGCGATGCCGCCCGCACCCTCG
CCTGTCTTAGCGTCAGCGACGACGTCAAGGACGCCATCATCACGAAGGGC
GCGCTGCCGACGCTCTTCCAGCTGGCCCGCTCTCTCGACGTCGCCAGCCA
GCGATACTCCACCCTCGCGCTCTGCAACCTGTCTTCCGGGGAGCACAAGG
CGCGAATCGTCAGCGAGGGGGCCGTTCGGCCGCTCACGTTCCTGGCCCGG
TTCCCCGACCTCGAGATACAGCGGTACGCGGCGCTCGCGATCGCGGGGCT
GGCCCTGGGAGACCACGGCAAGCCACCAAACAAGCTGCGGATAACCGAGG
AGGGTGCTTTGAAGCCGCTCATTGACCTCGTACGATTCCCGGAGGCCGAG
GTGCAGCGGTGCGCGTGCCTTGCCGTGAACGCCGTGGCCCTCGGCACCCA
CAGCTCGACGAAGTCGGCGGTCATGCACGAGGACGGGCTCTTCCCTCTCC
TGGAGCTGGTCAACTCCGAGGACGGCGACTGCGTGAGGACGGCGGTGTAC
GCGCTGGGTTCCCTGTGCGAGAGCGACCCGGTCAAGGCGAGGCTCATCGA
GCTCGGTGCCGTCGTGAACGTGGTCGGCCAAGCCAGCTTTGGCGATATAG
AGGTCAAGCGCGCCGCCGGGTACTTCCTGGCCCTGTTGTGTGAGACGAGA
GAGTTTCACGACGACCTGGCGAGGGAGGGTGGACTCCAAGCGGTGGTGGC
GCTCGCGAGTCTTGAAGATGTCGAGTGTCAGGAATACGCAGCGTTTTCCT
TGGCGCACTTGTCGAGCAACCACGAGTACCAGGTTACGCTTGTGGAGCTC
GGCGCACTGCGTCCCCTGGTGAGCATGATGGCGGTTGAGGCCGAGCCACG
CCATTACGCCGGGCTTGCCCTCCTCAAGCTGGCCGACAACTTCGAGAACC
ACATCCGCATCGCCGAAGAGGGCGGCATCCAAGCCCTCCTCAGACTCGGC
CGCGCGCGGTCCACGGACGAGGAGCTGCAATACAAGGCCGCGCTGACCGT
GGGTCATCTGGCATCCAACGCAGTAAAGCTGCTACCCAAGGGCAAGGAGA
AGGCGAACATCGGGTTTGGAGCAACCGTGCTGCAGAGCAACACCGACAGC
AAGGCGCGGCGAGCACAGAAGCAGACGCAGGAACATTTGGACCAGTCATT
GCGAGCTGGATAG
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