mRNA_E_fasciculatus_S2_contig696.15099.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig696.15099.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JG16_9PHAE) HSP 1 Score: 766 bits (1979), Expect = 1.820e-278 Identity = 402/415 (96.87%), Postives = 406/415 (97.83%), Query Frame = 1
Query: 1 MLPFFLLALLPLLSAACALVSGFIGDDLSAARGGGLAFCLQPELPRHGRSEAVVGKDASTVGPRRQEKTAITMLTTTQTFGAGSMWPATSVSGGIGSGASRNDGASPGRRRPRARTSGSSSANSDSALHAMAIPARCALPSVDLLRQAYGPRRHFWGDLTPAETRRFYHELLPVSVYVDAVGAKALCDGNERPLGGGMSGGGLATVVDVANKQQGGHWEYFFGAAETLEERARLASMARHAARLYVRERCKLPSRVVAHLYDGLRHLKRHGSFRVTGETWPELWDKYERKIRSEDPSLEGEDLKTAICFRILEKSCSTSEMFNNLSGCSDLNSFLPDTLPETAPTQHQAAFAAESAAACAGALRLIPLMQPFRRAKMQGEGAVVVQKRAKRHTRRRKILAGRRRRIRTSNRPRTL 1245
MLP FLLALLPLLSAACALVSGFIGDDLSAARG LAFCLQPELPRHGRSEAVVGKD+STVGPRRQEKTAITMLTTT+TFGAGSMWPATS SGGIGSGASRNDGASPGRRRPRART GSSSANSDSALHAMAIPARCALPSVDLLRQAYGPRRHFWGDLTPAETRRFYHELLPVSVYVDAVGAKALCDGNERPLGGGMSGGGLATVVDVAN+QQGGHWEYFFGAAETLEERARLASMARHAARLYVRERCKLPSRVVAHLYDGLRHLKRHGSFRVTGETWPELWDKYERKIRSEDPSLEGEDLKTAIC RILEKSCSTSEMFNNLSGCSDLNSFLPDTL ETAPTQHQ AFAAESAAACAGALRLIPLMQPFRR KMQGEGAVVVQKRAKRHTRRRKILAGRRRRIR+SNRPRTL
Sbjct: 1 MLPVFLLALLPLLSAACALVSGFIGDDLSAARGS-LAFCLQPELPRHGRSEAVVGKDSSTVGPRRQEKTAITMLTTTRTFGAGSMWPATSPSGGIGSGASRNDGASPGRRRPRARTGGSSSANSDSALHAMAIPARCALPSVDLLRQAYGPRRHFWGDLTPAETRRFYHELLPVSVYVDAVGAKALCDGNERPLGGGMSGGGLATVVDVANRQQGGHWEYFFGAAETLEERARLASMARHAARLYVRERCKLPSRVVAHLYDGLRHLKRHGSFRVTGETWPELWDKYERKIRSEDPSLEGEDLKTAICLRILEKSCSTSEMFNNLSGCSDLNSFLPDTLTETAPTQHQEAFAAESAAACAGALRLIPLMQPFRRTKMQGEGAVVVQKRAKRHTRRRKILAGRRRRIRSSNRPRTL 414
BLAST of mRNA_E_fasciculatus_S2_contig696.15099.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPF0_9STRA) HSP 1 Score: 168 bits (426), Expect = 3.120e-45 Identity = 99/218 (45.41%), Postives = 128/218 (58.72%), Query Frame = 1
Query: 331 RPRARTSGSSSANSDSALHAMAIPARCALPSVDLLRQAYGPRRHFWGDLTPAETRRFYHELLPVSVYVDAVGAKALCDGNERPLGGGMSGGGLATVVDVANKQQGGHWEYFFGAAETLEERARLASMARHAARLYVRERCKLPSRVVAHLYDGLRHLKRHGSFRVTGETWPELWDKYERKIRSE-DPSLEGEDLKTAICFRILEKSCSTSEMFNNLSG 981
RP ARTS + L A +P + VDLLR+ YGP R+FWGDL+ +TR FYH+LLPVS+ L + A+ A TLEERAR ASMARHAARLY RERC LPSR+ A LYDG RHL+R+G++ +G+TW ELW KYE ++R+E P E ++ +C+RILEKSCST++MF+ L+G
Sbjct: 61 RPGARTSSTK-------LAAAVLPDPYPVAEVDLLRRIYGPARNFWGDLSAQQTRAFYHDLLPVSL--------------------------LQLEQEAADAS----------APLTLEERARRASMARHAARLYARERCALPSRITAALYDGFRHLQRYGTWNASGQTWDELWAKYEVQVRAELGPQAGEEAIRDGVCWRILEKSCSTNKMFDRLTG 235
BLAST of mRNA_E_fasciculatus_S2_contig696.15099.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L0_9STRA) HSP 1 Score: 154 bits (388), Expect = 9.360e-40 Identity = 89/205 (43.41%), Postives = 118/205 (57.56%), Query Frame = 1
Query: 382 LHAMAIPARCALPSVDLLRQAYGPRRH-FWGDLTPAETRRFYHELLPVSVYVDAVGAKALCDGNERPLGGGMSGGGLATVVDVANKQQGGHWEYFFGAAETLEERARLASMARHAARLYVRERCKLPSRVVAHLYDGLRHLKRHGSFRVTGETWPELWDKYERKIRSE-DPSLEGEDLKTAICFRILEKSCSTSEMFNNLSGCSD 990
L A +P + + LR+ YGPRR+ FWGDL+ +TR FYHELLPVS+ +A LC + TLEERAR ASMARHAARLY RERC LP R+ A LYDG RH +++G++ +G+TW ELW KYE ++R E P + ++ A+C RILEKSC T++MF+ L+G +D
Sbjct: 80 LSAAVLPDPYPVADLQSLRKVYGPRRNKFWGDLSNKQTRAFYHELLPVSLQFEA---DDLC-------------------------------------SLTLEERARRASMARHAARLYARERCALPGRLTAVLYDGFRHFRKYGTWNSSGQTWDELWAKYEGQVRRECGPEASEDAIRDAVCRRILEKSCCTNKMFDRLAGMAD 244
BLAST of mRNA_E_fasciculatus_S2_contig696.15099.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3N8_9STRA) HSP 1 Score: 132 bits (331), Expect = 8.580e-32 Identity = 73/189 (38.62%), Postives = 103/189 (54.50%), Query Frame = 1
Query: 415 LPSVDLLRQAYGPRRHFWGDLTPAETRRFYHELLPVSVYVDAVGAKALCDGNERPLGGGMSGGGLATVVDVANKQQGGHWEYFFGAAETLEERARLASMARHAARLYVRERCKLPSRVVAHLYDGLRHLKRHGSFRVTGETWPELWDKYERKIRSEDPSLEGEDLKTAICFRILEKSCSTSEMFNNLSG 981
L +VD RQ YG +H+WGD + +ETR+ YHELLPVS A D GMS LEERA+ AS ARH+AR+Y RERC LP R+VA LYDG R + HG + G TW ++W KYE+++ E P++ +DL+ + RI++ +C T+ +F++ +G
Sbjct: 107 LTTVDDFRQTYGHNKHWWGDFSSSETRKLYHELLPVSF--------ASLDQTH-----GMS----------------------------LEERAKAASAARHSARIYARERCTLPGRIVAQLYDGFRSWRSHGEWNPDGLTWEQIWLKYEKRVLKELPNISNDDLEEEVYRRIIQSACRTNNVFDSATG 254
BLAST of mRNA_E_fasciculatus_S2_contig696.15099.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVG2_NANGC) HSP 1 Score: 104 bits (259), Expect = 5.110e-21 Identity = 74/194 (38.14%), Postives = 94/194 (48.45%), Query Frame = 1
Query: 415 LPSVDLLRQAYGPRRHFWGDLTPAETRRFYHELLPVSVYVDAVGAKALCDGNERPLGGGMSGGGLATVVDVANKQQGGHWEYFFGAAETLEERARLASMARHAARLYVRERCKLPSRVVAHLYDGLRHLKRHGSFRVTGETWPELWDKYERKIRSE--DPSLEG----EDLKTAICFRILEKSCSTSEMFNNLS 978
+ +VD LR +G + FWGDL ETR YH+LLP + DA P A +E+ ARLAS ARHAARLY RER LP R+ A LYDG RHL G + TG ++ E+W KYE KI+ E + G E+L + FRILEKSC T+ F+ +
Sbjct: 124 ITTVDGLRTRHG-QGSFWGDLNHVETRYVYHQLLPRHLLQDA---------QAHPD------------------------------ALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRAGQVGQEELNRMVAFRILEKSCETNSGFDRFA 277
BLAST of mRNA_E_fasciculatus_S2_contig696.15099.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMN0_9STRA) HSP 1 Score: 104 bits (259), Expect = 8.660e-21 Identity = 74/194 (38.14%), Postives = 94/194 (48.45%), Query Frame = 1
Query: 415 LPSVDLLRQAYGPRRHFWGDLTPAETRRFYHELLPVSVYVDAVGAKALCDGNERPLGGGMSGGGLATVVDVANKQQGGHWEYFFGAAETLEERARLASMARHAARLYVRERCKLPSRVVAHLYDGLRHLKRHGSFRVTGETWPELWDKYERKIRSE--DPSLEG----EDLKTAICFRILEKSCSTSEMFNNLS 978
+ +VD LR +G + FWGDL ETR YH+LLP + DA P A +E+ ARLAS ARHAARLY RER LP R+ A LYDG RHL G + TG ++ E+W KYE KI+ E + G E+L + FRILEKSC T+ F+ +
Sbjct: 124 ITTVDGLRTRHG-QGSFWGDLNHVETRYVYHQLLPRHLLQDA---------QAHPD------------------------------ALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRAGQVGQEELNRMVAFRILEKSCETNSGFDRFA 277
BLAST of mRNA_E_fasciculatus_S2_contig696.15099.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0ZDZ1_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.760e-20 Identity = 66/187 (35.29%), Postives = 97/187 (51.87%), Query Frame = 1
Query: 421 SVDLLRQAYGPRRHFWGDLTPAETRRFYHELLPVSVYVDAVGAKALCDGNERPLGGGMSGGGLATVVDVANKQQGGHWEYFFGAAETLEERARLASMARHAARLYVRERCKLPSRVVAHLYDGLRHLKRHGSFRVTGETWPELWDKYERKIRSEDPSLEGED-LKTAICFRILEKSCSTSEMFNNLS 978
+V++LRQ YG R ++WGDL+ +TR Y LLP + L + + L L++RA +ASMAR+AA++Y RERC++P RV A+ YD R+ R G + TG T ++W+KYER+I+SE ED L ++ RIL KSCST+ + L+
Sbjct: 104 TVNILRQEYGERANWWGDLSSRQTRLLYQRLLPRVI---------LSEDEFQDL--------------------------------PLKDRAYIASMARYAAKIYARERCRVPGRVAANFYDATRYAIRTGRWSWTGMTVDDIWNKYEREIKSELGEDVTEDKLYKSLYERILSKSCSTNPFIDQLT 249
BLAST of mRNA_E_fasciculatus_S2_contig696.15099.1 vs.
Match: Hypothetical (protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IUJ0_9EUKA) HSP 1 Score: 89.4 bits (220), Expect = 7.800e-17 Identity = 66/204 (32.35%), Postives = 91/204 (44.61%), Query Frame = 1
Query: 379 ALHAMAIPARCALPSVDLLRQAYGPRRHFWGDLTPAETRRFYHELLPVSVYVDAVGAKALCDGNERPLGGGMSGGGLATVVDVANKQQGGHWEYFFGAAETLEERARLASMARHAARLYVRERCKLPSRVVAHLYDGLRHLKRHGSFRVTGETWPELWDKYERKIRSEDPSLEGE----DLKTAICFRILEKSCSTSEMFNNLS 978
A HA A A SVD LRQ +G R+ ++GDL TR+ YH LLP + D A L +RAR+A AR AARLY RER LP + L+DGLRHL+ HG+F+ G + E++ KY ++ P G+ D T +L KSCST+ ++++
Sbjct: 24 AYHAAAANASLVATSVDELRQLHGARQRWYGDLDWVGTRQLYHSLLPTHLVEDE--------------------------------------------ALPLAQRARMAVSARRAARLYARERALLPLCTGSMLFDGLRHLRDHGTFQPDGLSELEIFSKYAEQLGVPPPDWSGDADDGDAYTDFYLTVLRKSCSTNPRVDSVT 183
BLAST of mRNA_E_fasciculatus_S2_contig696.15099.1 vs.
Match: Hypothetical (protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N5H1_9EUKA) HSP 1 Score: 88.6 bits (218), Expect = 9.970e-16 Identity = 69/197 (35.03%), Postives = 92/197 (46.70%), Query Frame = 1
Query: 412 ALP-SVDLLRQAYGPRRHFWGDLTPAETRRFYHELLPVSVYVDAVGAKALCDGNERPLGGGMSGGGLATVVDVANKQQGGHWEYFFGAAETLEERARLASMARHAARLYVRERCKLPSRVVAHLYDGLRHLKRHGSFRVTGETWPELWDKYERKIRSEDPSLEGEDLKT---AICFRILEKSCSTSEMFNNLSGCSD 990
ALP SVD LR G R+ +WGDL ETR YH LLP S +D E + +L ERARLA + RHAARLY RER +LP + L DG+R L G F+ G + ++W KY + +E L ED+ T ++C IL K+ +T++ + L GC D
Sbjct: 162 ALPTSVDALRDLLGHRQSWWGDLDAVETRELYHSLLP-SYLLD-----------EDRI--------------------------------SLHERARLAVLIRHAARLYARERAQLPLTLACELLDGVRQLWESGRFQPGGLSEEQVWRKYAEEY-AEAAGLLAEDVCTEDPSLCEMILRKASTTNKQVDELVGCLD 313
BLAST of mRNA_E_fasciculatus_S2_contig696.15099.1 vs.
Match: Hypothetical (protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3XBR4_9SPIT) HSP 1 Score: 86.3 bits (212), Expect = 5.580e-15 Identity = 62/187 (33.16%), Postives = 92/187 (49.20%), Query Frame = 1
Query: 421 SVDLLRQAYGPRRHFWGDLTPAETRRFYHELLPVSVYVDAVGAKALCDGNERPLGGGMSGGGLATVVDVANKQQGGHWEYFFGAAETLEERARLASMARHAARLYVRERCKLPSRVVAHLYDGLRHLKRHGSFRVTGETWPELWDKYERKIRSEDPSLEGEDLKTAICFRILEKSCSTSEMFNNLSG 981
+V+ LRQ YG R+H++GDL ETR YHELLP + L + + +D+A ERARLA AR AARLY RER LP + L DG+R L + G+F+ G + ++W+KY I+ + +G D++ I +L+KSC+++ + L G
Sbjct: 194 TVEALRQQYGHRQHWFGDLDARETRELYHELLP----------RQLLEND---------------AIDLA-------------------ERARLAVAARRAARLYARERALLPVSLSCELLDGMRTLMKKGTFQPGGLSEKQIWEKYYGAIQGQGG--DG-DVQDQIYMMVLQKSCTSNAAVDQLMG 333 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig696.15099.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig696.15099.1 >prot_E_fasciculatus_S2_contig696.15099.1 ID=prot_E_fasciculatus_S2_contig696.15099.1|Name=mRNA_E_fasciculatus_S2_contig696.15099.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=416bp MLPFFLLALLPLLSAACALVSGFIGDDLSAARGGGLAFCLQPELPRHGRSback to top mRNA from alignment at E_fasciculatus_S2_contig696:23281..26013- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig696.15099.1 ID=mRNA_E_fasciculatus_S2_contig696.15099.1|Name=mRNA_E_fasciculatus_S2_contig696.15099.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2733bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig696:23281..26013- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig696:23281..26013- >mRNA_E_fasciculatus_S2_contig696.15099.1 ID=mRNA_E_fasciculatus_S2_contig696.15099.1|Name=mRNA_E_fasciculatus_S2_contig696.15099.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1248bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig696:23281..26013- (Ectocarpus fasciculatus EfasUO2)back to top |