mRNA_E_fasciculatus_S2_contig6924.15061.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6924.15061.1 vs.
Match: Subtilisin (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G975_ECTSI) HSP 1 Score: 370 bits (950), Expect = 1.310e-123 Identity = 179/210 (85.24%), Postives = 184/210 (87.62%), Query Frame = 1
Query: 1 QVVEYGEIMEMLTTYEYTIDYTNDADGAAETWGNEAGHGIISAAQMLAWVEENCSEACPGASGSXXXXXXXXXXXXXPTQPGSLGCYKDDPSDRVLTAMWSSSVMIPSVCAAYCHRESASYAYYATQYGRECWCQDADIDLRHGEATCDYACSGDASILCGGFDAFTLYDLEGANLPTPPADDNYVGCFADDRHDRVLGAKTSSTSMTSE 630
+VVEYGE+MEMLT YEYT+DYTNDADGAAETWGNEAGHGIISAAQMLAWVEENCSEAC GASGS QPGSLGCYKDDPSDRVLTAMWSS VM PSVCAAYCHRESASYAYYA QYG ECWCQD DIDLRHGEATCDYACSGDASI CGGF AFTLYDLEGANLPTPPADDNYVGCFADD DRVLGA+TSS+SMTSE
Sbjct: 204 RVVEYGEVMEMLTNYEYTVDYTNDADGAAETWGNEAGHGIISAAQMLAWVEENCSEACSGASGSTPAPTPTT------AQPGSLGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGGECWCQDTDIDLRHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSSSMTSE 407
BLAST of mRNA_E_fasciculatus_S2_contig6924.15061.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX7_ECTSI) HSP 1 Score: 171 bits (433), Expect = 7.300e-46 Identity = 77/107 (71.96%), Postives = 89/107 (83.18%), Query Frame = 1
Query: 313 MIPSVCAAYCHRESASYAYYATQYGRECWCQDADIDLR-HGEATCDYACSGDASILCGGFDAFTLYDLEGANLPTPPADDNYVGCFADDRHDRVLGAKTSSTSMTSE 630
M P+VCA YC + +SY +YATQYGRECWCQD +DLR HG ATCDY CSGD SI+CGGFD+F+LYDLE LP+PP DDNYVGCFADD++DRVLGAK+SS MTSE
Sbjct: 1 MTPTVCADYCRGQPSSYTHYATQYGRECWCQDESVDLRRHGAATCDYQCSGDDSIVCGGFDSFSLYDLEEGELPSPPTDDNYVGCFADDQNDRVLGAKSSSNEMTSE 107
BLAST of mRNA_E_fasciculatus_S2_contig6924.15061.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI3_ECTSI) HSP 1 Score: 153 bits (387), Expect = 2.240e-39 Identity = 77/131 (58.78%), Postives = 85/131 (64.89%), Query Frame = 1
Query: 238 QPGSLGCYKDDPSDRVLTAMWSSSVMIPSVCAAYCHRESASYAYYATQYGRECWCQDADIDLRHGEATCDYACSGDASILCGGFDAFTLYDLEGANLPTPPADDNYVGCFADDRHDRVLGAKTSSTSMTSE 630
Q SLGC+ DD SDRVLTA WSSS M P+ CWCQ DIDLRHG+ TCDY CSGD+SI CGGFD+FTLY+LE LP P DNYVGCFADD+ DRVLG+K SS SMT E
Sbjct: 21 QEESLGCFGDDRSDRVLTAEWSSSSMTPA-----------------------CWCQGPDIDLRHGDGTCDYVCSGDSSIKCGGFDSFTLYELESEGLPVAPMGDNYVGCFADDKEDRVLGSKMSSGSMTPE 128
BLAST of mRNA_E_fasciculatus_S2_contig6924.15061.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL4_9PHAE) HSP 1 Score: 134 bits (338), Expect = 8.230e-33 Identity = 59/90 (65.56%), Postives = 72/90 (80.00%), Query Frame = 1
Query: 361 YAYYATQYGRECWCQDADIDLRHGEATCDYACSGDASILCGGFDAFTLYDLEGANLPTPPADDNYVGCFADDRHDRVLGAKTSSTSMTSE 630
Y + + R+CWCQD +IDLRHGE TCDYAC+GD S++CGG +F+LY+LE A LPT P DD+YVGCFADDR DRVLG +TSS+ MTSE
Sbjct: 16 YLIVPSLFSRQCWCQDENIDLRHGEGTCDYACTGDGSVVCGGILSFSLYELEEAILPTAPTDDSYVGCFADDRQDRVLGVQTSSSEMTSE 105
BLAST of mRNA_E_fasciculatus_S2_contig6924.15061.1 vs.
Match: EsV-1-166 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 124 bits (312), Expect = 2.420e-29 Identity = 62/118 (52.54%), Postives = 76/118 (64.41%), Query Frame = 1
Query: 250 LGCYKDDPSDRVLTAMWSSSVMIPSVCAAYCHRESASYAYYATQYGRECWCQ-DADIDL-RHGEATCDYACSGDASILCGGFDAFTLYDLEGANLPTPPADDNYVGCFADDRHDRVLG 597
+GC+ D DRV M +SS M +VC YC A+Y ATQYG ECWC DA+++ RH + CD+AC GDA+ +CGGFDAF LY + PT P D YVGCFADDR DR+LG
Sbjct: 436 VGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYM--ATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKI---TEPTEPTGDEYVGCFADDREDRLLG 548
BLAST of mRNA_E_fasciculatus_S2_contig6924.15061.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE) HSP 1 Score: 114 bits (286), Expect = 3.100e-26 Identity = 58/118 (49.15%), Postives = 73/118 (61.86%), Query Frame = 1
Query: 250 LGCYKDDPSDRVLTAMWSSSVMIPSVCAAYCHRESASYAYYATQYGRECWCQ-DADIDL-RHGEATCDYACSGDASILCGGFDAFTLYDLEGANLPTPPADDNYVGCFADDRHDRVLG 597
+GC+ D DRV M +S M +VC YC A++ ATQ+G ECWC DA+I+ RH + CD C G+A+ +CGGFDAF LY + PT P D YVGCFADDR DR+LG
Sbjct: 14 VGCFADSKDDRVFEYMKTSPTMTTAVCLEYCLDRRATFM--ATQFGIECWCSVDAEIEYDRHSDGVCDCECGGEATDICGGFDAFDLYKI---TEPTEPTGDEYVGCFADDREDRLLG 126
BLAST of mRNA_E_fasciculatus_S2_contig6924.15061.1 vs.
Match: EsV-1-166 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI) HSP 1 Score: 110 bits (274), Expect = 2.350e-24 Identity = 58/123 (47.15%), Postives = 72/123 (58.54%), Query Frame = 1
Query: 250 LGCYKDDPSDRVLTAMWSSSVMIPSVCAAYCHRESASYAYYATQYGRECWCQ-DADIDL-RHGEATCDYACSGDASILCGGFDAFTLYDLEGANLPTPPADDNYVGCFADDRHDRVLGAKTSS 612
+GC+ D+ DRV M +S M +VC YC A+Y ATQYG ECWC DA+ + RH + CD+AC GD + CGGFDAF LY + P P D YVGCFAD+ D VLG + S
Sbjct: 403 VGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYM--ATQYGIECWCSVDAETEYDRHSDGVCDHACGGDEADYCGGFDAFDLYKI---TEPREPTGDEYVGCFADNPEDWVLGGEIKS 520
BLAST of mRNA_E_fasciculatus_S2_contig6924.15061.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS1_ECTSI) HSP 1 Score: 104 bits (259), Expect = 2.960e-22 Identity = 60/134 (44.78%), Postives = 79/134 (58.96%), Query Frame = 1
Query: 241 PGSLGCYKDDPSDRVLTAM-WSSSVMIPSVCAAYCHRESASYAYYATQYGRECWCQDADID-LRHGE-ATCDYACSGDASILCGGFDAFTLYDLEGANLPTPPADDNYVGCFADDRHDRVLG-AKTSSTSMTSE 630
P SLGCY+DD DR++ + S + M +C C Y+ATQYGRECWC A D + HGE A C YAC+GDA CGGFDA +Y G ++PT + +VGC+ D+ R++ A T S+SMT E
Sbjct: 741 PLSLGCYEDDREDRIMDDLALSDNAMTTELCEQTC----LGNTYFATQYGRECWCGSAGADYILHGESADCTYACAGDADQTCGGFDAANVYLYTGDDVPTTSS---FVGCYQDESDARIMELALTDSSSMTKE 867
BLAST of mRNA_E_fasciculatus_S2_contig6924.15061.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK9_ECTSI) HSP 1 Score: 103 bits (256), Expect = 3.690e-22 Identity = 61/138 (44.20%), Postives = 78/138 (56.52%), Query Frame = 1
Query: 247 SLGCYKDDPSDRVLTAM-WSSSVMIPSVCAAYCHRESASYAYYATQYGRECWCQDADIDLR-HGEAT-CDYACSGDASILCGGFDAFTLY----DLEGANLPTPPADDNYV--GCFADDRHDRVLGAKT-SSTSMTSE 630
+LGCY DDP DR++ + S S M +C C + Y+ATQYGRECWC A D HGE+T C YACSGD CGGFDA +Y D + P+P ++V GC+ DDR DR++ S SMT+E
Sbjct: 306 ALGCYADDPEDRIMDDLVLSDSSMTTELCELTCEGST----YFATQYGRECWCGSAGADYALHGESTDCTYACSGDTDQTCGGFDAANVYRYPDDSTPSPTPSPTEAASFVALGCYGDDREDRIMDELVLSDPSMTTE 439
BLAST of mRNA_E_fasciculatus_S2_contig6924.15061.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE6_ECTSI) HSP 1 Score: 102 bits (254), Expect = 1.340e-21 Identity = 57/135 (42.22%), Postives = 78/135 (57.78%), Query Frame = 1
Query: 235 TQPGSLGCYKDDPSDRVLTAMWSSSVMIPSVCAAYCHRESASYAYYATQYGRECWCQDADIDLR-HGEAT-CDYACSGDASILCGGFDAFTLYDLEGANLPTPPADDNYVGCFADDRHDRVLG-AKTSSTSMTSE 630
T P +LGCY+DD DR++ + S S+ C + Y+ATQYGRECWC A ++ HGE+T C YAC+GDA CGGFDA +Y + PT ++VGC+ D+ R++ A T S+SMT E
Sbjct: 629 TGPLALGCYEDDREDRIMDDLALSDY---SMTTELCEQTCLGNTYFATQYGRECWCGSAGVEYALHGESTDCTYACAGDADQTCGGFDAANVYRYTDESTPTS----SFVGCYQDESDARIMELALTDSSSMTKE 756 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6924.15061.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6924.15061.1 >prot_E_fasciculatus_S2_contig6924.15061.1 ID=prot_E_fasciculatus_S2_contig6924.15061.1|Name=mRNA_E_fasciculatus_S2_contig6924.15061.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=202bp MEMLTTYEYTIDYTNDADGAAETWGNEAGHGIISAAQMLAWVEENCSEACback to top mRNA from alignment at E_fasciculatus_S2_contig6924:109..3079- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig6924.15061.1 ID=mRNA_E_fasciculatus_S2_contig6924.15061.1|Name=mRNA_E_fasciculatus_S2_contig6924.15061.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2971bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6924:109..3079- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6924:109..3079- >mRNA_E_fasciculatus_S2_contig6924.15061.1 ID=mRNA_E_fasciculatus_S2_contig6924.15061.1|Name=mRNA_E_fasciculatus_S2_contig6924.15061.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=606bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6924:109..3079- (Ectocarpus fasciculatus EfasUO2)back to top |